Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmov10j21
         (629 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    26   0.30 
EF592536-1|ABQ95982.1|  598|Tribolium castaneum beta-N-acetylglu...    22   4.9  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    22   4.9  
AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory recept...    21   8.5  
AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory recept...    21   8.5  

>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 25.8 bits (54), Expect = 0.30
 Identities = 9/16 (56%), Positives = 13/16 (81%)
 Frame = -1

Query: 68  SLVCSDNILLFLLYTN 21
           SL+C++ I LF +YTN
Sbjct: 74  SLLCTEKIFLFAIYTN 89


>EF592536-1|ABQ95982.1|  598|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG1 protein.
          Length = 598

 Score = 21.8 bits (44), Expect = 4.9
 Identities = 10/29 (34%), Positives = 16/29 (55%)
 Frame = +1

Query: 100 RWSAHAQFPIDVKAP*KADTDTSGMRLPS 186
           RW   + +    KAP   DT+ +G+ LP+
Sbjct: 26  RWECKSNYC--QKAPITPDTEATGLSLPA 52


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 21.8 bits (44), Expect = 4.9
 Identities = 7/16 (43%), Positives = 10/16 (62%)
 Frame = +1

Query: 457 IYFILLYTYNYIIVCH 504
           I+   LYT N + +CH
Sbjct: 912 IFVSTLYTANVVCICH 927


>AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory receptor
           candidate 45 protein.
          Length = 379

 Score = 21.0 bits (42), Expect = 8.5
 Identities = 8/20 (40%), Positives = 12/20 (60%)
 Frame = -2

Query: 91  LQVFMIAEAWYVRIISSCFC 32
           L  F+I    +  I++SCFC
Sbjct: 83  LDEFLIVALAFQVILNSCFC 102


>AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory receptor
           candidate 8 protein.
          Length = 379

 Score = 21.0 bits (42), Expect = 8.5
 Identities = 8/20 (40%), Positives = 12/20 (60%)
 Frame = -2

Query: 91  LQVFMIAEAWYVRIISSCFC 32
           L  F+I    +  I++SCFC
Sbjct: 83  LDEFLIVALAFQVILNSCFC 102


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 150,694
Number of Sequences: 336
Number of extensions: 3292
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 16188355
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)