Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmov10j20
(594 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_46929| Best HMM Match : Thioredoxin (HMM E-Value=0) 120 7e-28
SB_42595| Best HMM Match : Thioredoxin (HMM E-Value=0) 96 2e-20
SB_48081| Best HMM Match : No HMM Matches (HMM E-Value=.) 93 2e-19
SB_35157| Best HMM Match : Thioredoxin (HMM E-Value=0) 93 2e-19
SB_30398| Best HMM Match : Thioredoxin (HMM E-Value=0) 86 2e-17
SB_30498| Best HMM Match : No HMM Matches (HMM E-Value=.) 75 4e-14
SB_56064| Best HMM Match : No HMM Matches (HMM E-Value=.) 72 3e-13
SB_45978| Best HMM Match : Thioredoxin (HMM E-Value=4.19997e-41) 70 1e-12
SB_20276| Best HMM Match : Thioredoxin (HMM E-Value=9.8e-06) 69 4e-12
SB_3640| Best HMM Match : Thioredoxin (HMM E-Value=4.3e-33) 66 2e-11
SB_17740| Best HMM Match : Thioredoxin (HMM E-Value=1.8e-27) 57 9e-09
SB_49513| Best HMM Match : Thioredoxin (HMM E-Value=1.8e-19) 54 1e-07
SB_30496| Best HMM Match : No HMM Matches (HMM E-Value=.) 52 3e-07
SB_14273| Best HMM Match : DUF1000 (HMM E-Value=0) 50 2e-06
SB_38445| Best HMM Match : ERp29 (HMM E-Value=2.2e-19) 44 7e-05
SB_218| Best HMM Match : No HMM Matches (HMM E-Value=.) 44 1e-04
SB_44457| Best HMM Match : Thioredoxin (HMM E-Value=2.2e-07) 42 3e-04
SB_55398| Best HMM Match : Thioredoxin (HMM E-Value=3.6e-21) 41 7e-04
SB_27151| Best HMM Match : Thioredoxin (HMM E-Value=9.2e-32) 40 0.001
SB_28181| Best HMM Match : RVP (HMM E-Value=0.00058) 36 0.019
SB_2701| Best HMM Match : Thioredoxin (HMM E-Value=4.8e-05) 34 0.075
SB_2654| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.13
SB_2655| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.17
SB_28982| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.8
SB_29194| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.9
SB_49098| Best HMM Match : Peptidase_M14 (HMM E-Value=4.5e-12) 28 6.5
>SB_46929| Best HMM Match : Thioredoxin (HMM E-Value=0)
Length = 362
Score = 120 bits (290), Expect = 7e-28
Identities = 56/105 (53%), Positives = 73/105 (69%), Gaps = 5/105 (4%)
Frame = +1
Query: 169 SSSDVIELTPSNFDKLVTNSDEIWIIEFFAPWCGHCKSLVPEYKKAARALKGIVKVGALD 348
+ DV+ELT +NF+K V NS ++W++EFFAPWCGHC+ L PE+ KAA LKG VKVGALD
Sbjct: 77 NKEDVVELTDTNFEKEVLNSKDLWLVEFFAPWCGHCQRLAPEWAKAATELKGKVKVGALD 136
Query: 349 ADEHRSVSQKYGVTGFPTIKIF-TGSKHT----PYQGQRTAEGFV 468
A H + +Y V G+PTIK+F G K++ YQG RTA +
Sbjct: 137 ATVHTVTASRYQVQGYPTIKVFAAGIKNSHSVEDYQGGRTASDII 181
Score = 50.0 bits (114), Expect = 1e-06
Identities = 23/41 (56%), Positives = 29/41 (70%), Gaps = 2/41 (4%)
Frame = +1
Query: 352 DEHRSVSQKYGVTGFPTIKIFTGSKHTP--YQGQRTAEGFV 468
D H+SV Y + GFPTIKIF +K++P Y GQRTA+G V
Sbjct: 2 DVHQSVGGPYNIRGFPTIKIFGANKNSPQDYNGQRTAQGIV 42
>SB_42595| Best HMM Match : Thioredoxin (HMM E-Value=0)
Length = 536
Score = 95.9 bits (228), Expect = 2e-20
Identities = 51/119 (42%), Positives = 69/119 (57%), Gaps = 6/119 (5%)
Frame = +1
Query: 130 ILLCATGSLALYDS---SSDVIELTPSNFDKLVTNSDEIWIIEFFAPWCGHCKSLVPEYK 300
+LL A SLA + DV+ LT NFD+ V + + ++EF+APWCGHCK+L PEY
Sbjct: 6 VLLLALVSLAYSEEIKEEEDVLVLTEKNFDEAVAANKHV-LVEFYAPWCGHCKALAPEYA 64
Query: 301 KAARAL---KGIVKVGALDADEHRSVSQKYGVTGFPTIKIFTGSKHTPYQGQRTAEGFV 468
KAA L K +K+ +DA + +K+ V G+PTIK F K + Y G RTA V
Sbjct: 65 KAAGQLKSEKSEIKLAKVDATAETKLGEKFQVQGYPTIKFFKDGKPSEYAGGRTAPEIV 123
Score = 66.5 bits (155), Expect = 2e-11
Identities = 35/100 (35%), Positives = 47/100 (47%), Gaps = 1/100 (1%)
Frame = +1
Query: 172 SSDVIELTPSNFDKLVTNSDEIWIIEFFAPWCGHCKSLVPEYKKAARALKGIVKVGALDA 351
S V L NFD++ N D+ +EF+APWCGHCK L P + + K +
Sbjct: 383 SKPVKVLCGKNFDEVARNKDKNVFVEFYAPWCGHCKQLAPIWDQLGEKYKDHADIVVAKM 442
Query: 352 DEHRSVSQKYGVTGFPTIKIF-TGSKHTPYQGQRTAEGFV 468
D + + V FPTIK F + Y G RT + FV
Sbjct: 443 DSTANEVEGVKVHSFPTIKYFPKEGEAVDYNGGRTLDDFV 482
>SB_48081| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 645
Score = 93.1 bits (221), Expect = 2e-19
Identities = 43/96 (44%), Positives = 62/96 (64%), Gaps = 3/96 (3%)
Frame = +1
Query: 184 IELTPSNFDKLVTNSDEIWIIEFFAPWCGHCKSLVPEYKKAARALK---GIVKVGALDAD 354
+ LT NF ++V N + + ++EFFAPWCGHCK L PEY+KAA+ L+ + + +DA
Sbjct: 179 LTLTKENFTEVV-NRESLMLVEFFAPWCGHCKQLAPEYEKAAQELQKHDPPIPLAIVDAT 237
Query: 355 EHRSVSQKYGVTGFPTIKIFTGSKHTPYQGQRTAEG 462
++QKY V G+PT+K+F K T Y+GQR G
Sbjct: 238 IESELAQKYEVQGYPTLKVFRKGKATEYKGQRDQYG 273
Score = 88.6 bits (210), Expect = 3e-18
Identities = 42/100 (42%), Positives = 61/100 (61%), Gaps = 3/100 (3%)
Frame = +1
Query: 178 DVIELTPSNFDKLVTNSDEIWIIEFFAPWCGHCKSLVPEYKKAARALK---GIVKVGALD 348
DV L NFD+++ ++ I ++EF+APWCGHCKSL PEY KAA+ +K V +D
Sbjct: 62 DVSVLNSKNFDRVIEENNII-LVEFYAPWCGHCKSLAPEYAKAAKKMKLNDPPVPFAKMD 120
Query: 349 ADEHRSVSQKYGVTGFPTIKIFTGSKHTPYQGQRTAEGFV 468
A ++Q++ V+G+PT+KIF Y+G R G V
Sbjct: 121 ATVASDIAQRFDVSGYPTLKIFRKGTPYEYEGPREESGIV 160
Score = 46.4 bits (105), Expect = 2e-05
Identities = 26/73 (35%), Positives = 40/73 (54%), Gaps = 2/73 (2%)
Frame = +1
Query: 205 FDKLVTNSDEIWIIEFFAPWCGHCKSLVPEYKKAARALKG--IVKVGALDADEHRSVSQK 378
FD++V + + +IEF+APWCG +L P +KK + + + + +DA + V
Sbjct: 535 FDEIVNDPKKDVLIEFYAPWCG--IALEPTFKKLGKHFRNDKNIVIAKIDATAN-DVPST 591
Query: 379 YGVTGFPTIKIFT 417
Y V GFPTI T
Sbjct: 592 YAVEGFPTIYFAT 604
>SB_35157| Best HMM Match : Thioredoxin (HMM E-Value=0)
Length = 1056
Score = 92.7 bits (220), Expect = 2e-19
Identities = 49/104 (47%), Positives = 62/104 (59%), Gaps = 5/104 (4%)
Frame = +1
Query: 172 SSDVIELTPSNFDKLVTNSDEIWIIEFFAPWCGHCKSLVPEYKKAARALK---GIVKVGA 342
SSDV++L SNF V D I ++EFFAPWCGHCK L PEY+ AA ALK V +
Sbjct: 537 SSDVLDLGDSNFKSGVAGKD-IMLVEFFAPWCGHCKRLAPEYETAAEALKKNDPPVPLAK 595
Query: 343 LDADE-HRSVSQKYGVTGFPTIKIF-TGSKHTPYQGQRTAEGFV 468
+D E + KYGV+G+PT+KIF G Y G R + G +
Sbjct: 596 VDCTEAGKDTCSKYGVSGYPTLKIFRNGEMSKDYDGPRDSSGII 639
Score = 57.2 bits (132), Expect = 9e-09
Identities = 33/104 (31%), Positives = 53/104 (50%), Gaps = 3/104 (2%)
Frame = +1
Query: 109 LHGYFIGILLCATGSLALYDSSSDVIELTPS-NFDKLVTNSDEIWIIEFFAPWCGHCKSL 285
L YF G L S L +S+ +++ NF ++V + + +IEF+APWCGHCKSL
Sbjct: 839 LEDYFAGSLKPHIKSEPLPESNDGPVKVVVGENFKEIVNDPTKDVLIEFYAPWCGHCKSL 898
Query: 286 VPEYKKAARALKGI--VKVGALDADEHRSVSQKYGVTGFPTIKI 411
P+Y + L+ + + + +DA + + V G I I
Sbjct: 899 EPKYNELGEKLQDVKDIVIAKMDATAN-DAPPNFSVQGIIIISI 941
>SB_30398| Best HMM Match : Thioredoxin (HMM E-Value=0)
Length = 295
Score = 86.2 bits (204), Expect = 2e-17
Identities = 42/100 (42%), Positives = 58/100 (58%), Gaps = 4/100 (4%)
Frame = +1
Query: 181 VIELTPSNFDKLVTNSDEIWIIEFFAPWCGHCKSLVPEYKKAARAL--KGIVKVGALDAD 354
VI+LT NFD++V N ++ ++EF+APWCGHCK L P Y++ A V + +DAD
Sbjct: 24 VIDLTKDNFDEVV-NGEKFALVEFYAPWCGHCKQLAPTYEQLGEAYTQSSDVIIAKVDAD 82
Query: 355 EHRSVSQKYGVTGFPTIKIFTGSKHTP--YQGQRTAEGFV 468
R + ++ V GFPTIK F TP Y G R F+
Sbjct: 83 GDRDLGSRFDVKGFPTIKYFPKGSTTPEEYNGGRDINDFI 122
>SB_30498| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 564
Score = 74.9 bits (176), Expect = 4e-14
Identities = 37/105 (35%), Positives = 63/105 (60%), Gaps = 5/105 (4%)
Frame = +1
Query: 169 SSSDVIELTPSNFDKLVTNSDEIWIIEFFAPWCGHCKSLVPEYKKAARAL--KGIVKVGA 342
S++ V +L NFD+++ D I +++F+APWC HC+ L+P+ + AA AL KG+ +
Sbjct: 18 SANFVYDLNAQNFDQMIREKD-IMLVDFYAPWCHHCQELLPQLEGAANALAAKGLFQFAK 76
Query: 343 LDADEHRS--VSQKYGVTGFPTIKIFTGSKHT-PYQGQRTAEGFV 468
+D + RS + + + G+P++K+F K+ Y GQRT V
Sbjct: 77 VDCTDPRSKVLCDNFKIEGYPSVKLFKFGKYAGDYIGQRTDAALV 121
>SB_56064| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 711
Score = 72.1 bits (169), Expect = 3e-13
Identities = 34/96 (35%), Positives = 52/96 (54%), Gaps = 1/96 (1%)
Frame = +1
Query: 172 SSDVIELTPSNFDKLVTNSDEIWIIEFFAPWCGHCKSLVPEYKKAARALKG-IVKVGALD 348
SS+V L P +F VT+ + ++FFAPWC C L+PEY+KAAR+ G V G +D
Sbjct: 283 SSNVHALGPEDFPSSVTSPSRPFFVDFFAPWCPPCMRLLPEYRKAARSFVGKPVGFGTVD 342
Query: 349 ADEHRSVSQKYGVTGFPTIKIFTGSKHTPYQGQRTA 456
H + +Y + +PT ++ S+ + G A
Sbjct: 343 CTVHSQLCHQYNIRSYPTTILYNNSQPHQFIGHHNA 378
Score = 70.5 bits (165), Expect = 9e-13
Identities = 26/83 (31%), Positives = 50/83 (60%)
Frame = +1
Query: 175 SDVIELTPSNFDKLVTNSDEIWIIEFFAPWCGHCKSLVPEYKKAARALKGIVKVGALDAD 354
S V E+ NF V S++ W+++F+APWCG C P+Y++ A+ LKG V+ ++ +
Sbjct: 433 SIVSEVNSKNFFTDVLASEDAWVVDFYAPWCGPCMRFAPKYEQLAKMLKGKVRAAKVNCE 492
Query: 355 EHRSVSQKYGVTGFPTIKIFTGS 423
+ + + + +PT++++ GS
Sbjct: 493 QDYGLCSEANIHSYPTVRLYLGS 515
>SB_45978| Best HMM Match : Thioredoxin (HMM E-Value=4.19997e-41)
Length = 271
Score = 70.1 bits (164), Expect = 1e-12
Identities = 29/86 (33%), Positives = 52/86 (60%), Gaps = 3/86 (3%)
Frame = +1
Query: 175 SDVIELTPSNFDKLVTNSDEIWIIEFFAPWCGHCKSLVPEYKKAARAL---KGIVKVGAL 345
S V+ LT + D+ + + + + ++ +FAPWCGHC + P Y KAA+ L + A+
Sbjct: 50 SKVVFLTDESHDEFIKSHENV-LVMYFAPWCGHCNEMKPNYYKAAQVLHDEDANCNLAAV 108
Query: 346 DADEHRSVSQKYGVTGFPTIKIFTGS 423
D +H+ V++K + G+PT+K++ S
Sbjct: 109 DCTKHKDVAKKVALAGYPTVKLYKAS 134
Score = 65.7 bits (153), Expect = 3e-11
Identities = 35/104 (33%), Positives = 54/104 (51%), Gaps = 3/104 (2%)
Frame = +1
Query: 166 DSSSDVIELTPSNFDKLVTNSDEIWIIEFFAPWCGHCKSLVPEYKKAARALKGIVK--VG 339
+ SS V +L S+F + N++ + ++ F+APWCGHCK+ P+Y+KAA K
Sbjct: 144 EDSSLVKQLDGSDFWGYLNNTEHV-LVMFYAPWCGHCKNAKPKYEKAAETFKDQPNRVFA 202
Query: 340 ALDADEHRSVSQKYGVTGFPTIKIFTGSKH-TPYQGQRTAEGFV 468
LD + V K V G+PT++ + K Y G R E +
Sbjct: 203 KLDCTKFGDVCDKEEVNGYPTLRYYLYGKFVVEYDGDRVTEDLI 246
>SB_20276| Best HMM Match : Thioredoxin (HMM E-Value=9.8e-06)
Length = 70
Score = 68.5 bits (160), Expect = 4e-12
Identities = 31/50 (62%), Positives = 36/50 (72%)
Frame = +1
Query: 172 SSDVIELTPSNFDKLVTNSDEIWIIEFFAPWCGHCKSLVPEYKKAARALK 321
SSDV++L SNF V D I ++EFFAPWCGHCK L PEY+ AA ALK
Sbjct: 12 SSDVLDLGDSNFKSGVAGKD-IMLVEFFAPWCGHCKRLAPEYETAAEALK 60
>SB_3640| Best HMM Match : Thioredoxin (HMM E-Value=4.3e-33)
Length = 386
Score = 66.5 bits (155), Expect = 2e-11
Identities = 31/82 (37%), Positives = 50/82 (60%), Gaps = 3/82 (3%)
Frame = +1
Query: 166 DSSSDVIELTPSNFDKLVTNSDEIWIIEFFAPWCGHCKSLVPEYKKAARALKGIVKVG-- 339
D+ S+V+ L FD V + + ++ F+APWCGHCK++ PEY AA+ LK G
Sbjct: 79 DTPSEVVHLRDDMFDDFVAKNPSV-LVMFYAPWCGHCKAMKPEYVDAAQTLKEQEIPGVL 137
Query: 340 -ALDADEHRSVSQKYGVTGFPT 402
A+DA + ++ +++ V G+PT
Sbjct: 138 AAVDATKEAALGKRFKVEGYPT 159
Score = 44.8 bits (101), Expect = 5e-05
Identities = 18/46 (39%), Positives = 26/46 (56%)
Frame = +1
Query: 175 SDVIELTPSNFDKLVTNSDEIWIIEFFAPWCGHCKSLVPEYKKAAR 312
S+V L+ + F V + ++ F+APWCGHCK PE AA+
Sbjct: 195 SEVYHLSDTTFKSFVKKKKHV-LVMFYAPWCGHCKKAKPELMSAAK 239
>SB_17740| Best HMM Match : Thioredoxin (HMM E-Value=1.8e-27)
Length = 472
Score = 57.2 bits (132), Expect = 9e-09
Identities = 34/114 (29%), Positives = 58/114 (50%), Gaps = 13/114 (11%)
Frame = +1
Query: 166 DSSSDVIELTPSNFDKLVTNSDEIWIIEFFAPWCGHCKSLVPEYKKAARAL----KGIVK 333
D ++EL SNF+ V + +++F+APWC HCK + P+YK A+ L V+
Sbjct: 131 DDEPTLLELDDSNFEPAVQKHKFV-LVDFYAPWCFHCKKMAPDYKDVAKELLILSHNSVR 189
Query: 334 VGALDADEH----RSVSQKYGVTGFPTIKIFTGSKHT-PYQG----QRTAEGFV 468
+ +D + + +KY V PTI +F K ++G +++ +GFV
Sbjct: 190 LAKVDCSANNMATKKTCKKYNVKFLPTIYLFHDGKFVEEFEGNNRNKKSIKGFV 243
Score = 41.1 bits (92), Expect = 7e-04
Identities = 16/51 (31%), Positives = 31/51 (60%)
Frame = +1
Query: 169 SSSDVIELTPSNFDKLVTNSDEIWIIEFFAPWCGHCKSLVPEYKKAARALK 321
+S V+ L NF++ + ++ + +++F+APWC C+ L P + AA L+
Sbjct: 49 ASPAVLNLNDQNFNETIKKNEYV-LVDFYAPWCSDCQRLSPLFDTAALQLR 98
>SB_49513| Best HMM Match : Thioredoxin (HMM E-Value=1.8e-19)
Length = 975
Score = 53.6 bits (123), Expect = 1e-07
Identities = 27/84 (32%), Positives = 46/84 (54%), Gaps = 2/84 (2%)
Frame = +1
Query: 181 VIELTPSNFDKLVTNSDEIWIIEFFAPWCGHCKSLVPEYKKAARALKGI--VKVGALDAD 354
V E+T +FD +V N+D+ ++ F+ PWCG C + P AR + I V V +DAD
Sbjct: 519 VTEVTTDSFDDIVINNDQDVLLVFYTPWCGMCINFAPVLLAVARFFQDISQVSVTRIDAD 578
Query: 355 EHRSVSQKYGVTGFPTIKIFTGSK 426
++ + V+ +P+I +F +
Sbjct: 579 QN-DLPWNLTVSSYPSIILFPAGR 601
>SB_30496| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 488
Score = 52.4 bits (120), Expect = 3e-07
Identities = 26/87 (29%), Positives = 48/87 (55%), Gaps = 4/87 (4%)
Frame = +1
Query: 181 VIELTPSNFDKLVTNSDEIWIIEFFAPWCGHCKSLVPEYKKAARAL----KGIVKVGALD 348
+ ELT +FD + + E+ +++F+APWC C +L P+Y+KAAR L K ++ ++
Sbjct: 24 IFELTDQDFDNFLKDK-EVMLVDFYAPWCSDCDNLRPKYEKAARDLAKEHKFVMAKALMN 82
Query: 349 ADEHRSVSQKYGVTGFPTIKIFTGSKH 429
+ ++ GV + T+ +T H
Sbjct: 83 TNSTQTTCLPMGVHYWRTLLAYTIGVH 109
>SB_14273| Best HMM Match : DUF1000 (HMM E-Value=0)
Length = 308
Score = 49.6 bits (113), Expect = 2e-06
Identities = 28/79 (35%), Positives = 43/79 (54%), Gaps = 1/79 (1%)
Frame = +1
Query: 181 VIELTPSNFDKLVTNSD-EIWIIEFFAPWCGHCKSLVPEYKKAARALKGIVKVGALDADE 357
V+EL S F +TN+ ++ + +F A WCG CKS+ P Y + K V + +D D
Sbjct: 11 VLELD-SQFTAELTNAGTKLVVADFTASWCGPCKSIAPVYSGLSEKYKQAVFL-KIDVDV 68
Query: 358 HRSVSQKYGVTGFPTIKIF 414
+ ++ K GVT PT + F
Sbjct: 69 CQELAAKQGVTAMPTFQFF 87
>SB_38445| Best HMM Match : ERp29 (HMM E-Value=2.2e-19)
Length = 335
Score = 44.4 bits (100), Expect = 7e-05
Identities = 30/114 (26%), Positives = 55/114 (48%), Gaps = 8/114 (7%)
Frame = +1
Query: 151 SLALYDSSS----DVIELTPSNFDKLVTNSDEIWIIEFFAPWCGHCKSLVPEYKKAAR-- 312
SL ++ S+S ++E T N D+ V S ++I F+APW HC+ ++ + + A
Sbjct: 14 SLTIFTSTSVHCKKIVEFTNENVDEYVDGSKFVFIF-FYAPWDDHCQRILQIFDQVADEF 72
Query: 313 ALKGIVKVGALDADEHRSVSQKYGVTGFPTIKIFTGSKHT--PYQGQRTAEGFV 468
A + + VG +A E ++ +Y + +P + F T Y G + F+
Sbjct: 73 ADRDDIVVGKSNAYEDVKIATRYWIDRYPMFRYFIKGSTTEETYDGGFKPDDFI 126
>SB_218| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 94
Score = 43.6 bits (98), Expect = 1e-04
Identities = 18/54 (33%), Positives = 33/54 (61%), Gaps = 1/54 (1%)
Frame = +1
Query: 199 SNFDKLVTNS-DEIWIIEFFAPWCGHCKSLVPEYKKAARALKGIVKVGALDADE 357
+ F+ ++ N+ D++ +I+F+A WCG C+ + P++KK A V +D DE
Sbjct: 19 AEFNSVINNTKDKLVVIDFYAEWCGPCRQIKPKFKKMALEEFKDVFFAKIDVDE 72
>SB_44457| Best HMM Match : Thioredoxin (HMM E-Value=2.2e-07)
Length = 438
Score = 42.3 bits (95), Expect = 3e-04
Identities = 19/50 (38%), Positives = 32/50 (64%)
Frame = +1
Query: 205 FDKLVTNSDEIWIIEFFAPWCGHCKSLVPEYKKAARALKGIVKVGALDAD 354
FDK + ++ E+ I+F A WCG C+ + P++++ A+ KG VK +D D
Sbjct: 4 FDKFLKDN-EVAAIDFTATWCGPCRMIGPKFEEMAKEFKG-VKCAKVDVD 51
>SB_55398| Best HMM Match : Thioredoxin (HMM E-Value=3.6e-21)
Length = 186
Score = 41.1 bits (92), Expect = 7e-04
Identities = 31/101 (30%), Positives = 50/101 (49%), Gaps = 1/101 (0%)
Frame = +1
Query: 151 SLALYDSSSDVIELTPSNFDKLVTNSDEIWIIEFFAPWCGHCKSLVPEYKKAARALKGIV 330
S L S + V LT + FDK + + ++F+APWC HC L P +++ A K
Sbjct: 82 SEGLSTSEAGVHILTKNTFDKHIELG--LHFVKFYAPWCIHCIKLAPIWERLAEDFKD-- 137
Query: 331 KVGALDADEHRSVSQKYGVTGFPTIKIF-TGSKHTPYQGQR 450
+AD ++S+ + G+PT+ +F G + Y G R
Sbjct: 138 -----NAD--ITISK---INGYPTLMLFKDGVQKKEYSGNR 168
>SB_27151| Best HMM Match : Thioredoxin (HMM E-Value=9.2e-32)
Length = 456
Score = 40.3 bits (90), Expect = 0.001
Identities = 16/58 (27%), Positives = 30/58 (51%)
Frame = +1
Query: 241 IIEFFAPWCGHCKSLVPEYKKAARALKGIVKVGALDADEHRSVSQKYGVTGFPTIKIF 414
+I+F A WCG CKS+ P + + +V + +D D+ + ++ G+ PT +
Sbjct: 32 VIDFTATWCGPCKSIAPVFTNLSMKFMDVVFL-KVDVDQCQLTAESCGIRAMPTFHFY 88
>SB_28181| Best HMM Match : RVP (HMM E-Value=0.00058)
Length = 664
Score = 36.3 bits (80), Expect = 0.019
Identities = 19/55 (34%), Positives = 28/55 (50%)
Frame = +1
Query: 250 FFAPWCGHCKSLVPEYKKAARALKGIVKVGALDADEHRSVSQKYGVTGFPTIKIF 414
F+APWCG + V E+ AA L G V A++ S +KY + FP ++
Sbjct: 459 FYAPWCGQSRRAVEEFNIAASLLYGKVTFIAINC-WAGSCREKYTLDSFPKFFVY 512
>SB_2701| Best HMM Match : Thioredoxin (HMM E-Value=4.8e-05)
Length = 215
Score = 34.3 bits (75), Expect = 0.075
Identities = 11/32 (34%), Positives = 22/32 (68%), Gaps = 1/32 (3%)
Frame = +1
Query: 193 TPSNFDKLVTNSDEIW-IIEFFAPWCGHCKSL 285
T ++FD+++++S + ++ FFAPW HC +
Sbjct: 8 TVTDFDRILSSSSNVLAVVHFFAPWAPHCNQM 39
>SB_2654| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 111
Score = 33.5 bits (73), Expect = 0.13
Identities = 17/57 (29%), Positives = 23/57 (40%)
Frame = +1
Query: 256 APWCGHCKSLVPEYKKAARALKGIVKVGALDADEHRSVSQKYGVTGFPTIKIFTGSK 426
A WC CK L P G V + +D D ++ +GV PT+ G K
Sbjct: 46 ACWCNPCKVLTPRLDAIIAEQDGKVDLAKVDIDVMGELAFNFGVNAVPTVIGMKGGK 102
>SB_2655| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 80
Score = 33.1 bits (72), Expect = 0.17
Identities = 16/55 (29%), Positives = 22/55 (40%)
Frame = +1
Query: 262 WCGHCKSLVPEYKKAARALKGIVKVGALDADEHRSVSQKYGVTGFPTIKIFTGSK 426
WC CK L P G V + +D D ++ +GV PT+ G K
Sbjct: 2 WCNPCKVLTPRLDAIIAEQDGKVDLAKVDIDVMGELAFNFGVNAVPTVIGMKGGK 56
>SB_28982| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1287
Score = 29.1 bits (62), Expect = 2.8
Identities = 12/33 (36%), Positives = 19/33 (57%)
Frame = +1
Query: 238 WIIEFFAPWCGHCKSLVPEYKKAARALKGIVKV 336
++IE F P C H + LVP K A + G++ +
Sbjct: 914 YVIEPFFPHCSHREDLVPVIKILAASALGVITI 946
>SB_29194| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2916
Score = 28.3 bits (60), Expect = 4.9
Identities = 14/45 (31%), Positives = 22/45 (48%)
Frame = +3
Query: 6 CLFYVFKLHIVVCCESRSQKFYNRLFINSVKFHNVTRIFYRYLAL 140
C + + LH VVC R + +Y L ++ V ++YR L L
Sbjct: 2045 CYYRILTLH-VVCLAGRRELYYRILTLHVVCLAGRRELYYRILTL 2088
>SB_49098| Best HMM Match : Peptidase_M14 (HMM E-Value=4.5e-12)
Length = 290
Score = 27.9 bits (59), Expect = 6.5
Identities = 11/28 (39%), Positives = 17/28 (60%)
Frame = +1
Query: 250 FFAPWCGHCKSLVPEYKKAARALKGIVK 333
+ +PW G K P Y++ ARA+ +VK
Sbjct: 52 WMSPW-GFTKKFPPNYRRHARAMNAVVK 78
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,313,534
Number of Sequences: 59808
Number of extensions: 342039
Number of successful extensions: 763
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 684
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 747
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1427401750
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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