Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmov10j20
(594 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g04980.1 68414.m00497 thioredoxin family protein similar to S... 132 2e-31
At2g32920.1 68415.m04036 thioredoxin family protein similar to S... 126 8e-30
At2g47470.2 68415.m05924 thioredoxin family protein similar to p... 102 2e-22
At2g47470.1 68415.m05925 thioredoxin family protein similar to p... 102 2e-22
At5g60640.2 68418.m07611 thioredoxin family protein similar to p... 95 4e-20
At5g60640.1 68418.m07610 thioredoxin family protein similar to p... 95 4e-20
At3g54960.1 68416.m06094 thioredoxin family protein similar to p... 94 5e-20
At1g21750.2 68414.m02723 protein disulfide isomerase, putative s... 87 1e-17
At1g21750.1 68414.m02722 protein disulfide isomerase, putative s... 87 1e-17
At1g77510.1 68414.m09026 protein disulfide isomerase, putative s... 81 7e-16
At1g35620.1 68414.m04425 thioredoxin family protein similar to S... 76 2e-14
At1g07960.3 68414.m00867 thioredoxin family protein low similari... 70 1e-12
At1g07960.2 68414.m00866 thioredoxin family protein low similari... 70 1e-12
At1g07960.1 68414.m00865 thioredoxin family protein low similari... 70 1e-12
At1g43560.1 68414.m05000 thioredoxin family protein contains Pfa... 66 2e-11
At1g03680.1 68414.m00347 thioredoxin M-type 1, chloroplast (TRX-... 64 5e-11
At4g03520.1 68417.m00480 thioredoxin M-type 2, chloroplast (TRX-... 64 7e-11
At1g76760.1 68414.m08933 thioredoxin family protein similar to t... 63 1e-10
At1g52260.1 68414.m05897 thioredoxin family protein similar to p... 61 6e-10
At3g15360.1 68416.m01948 thioredoxin M-type 4, chloroplast (TRX-... 60 1e-09
At3g16110.1 68416.m02035 thioredoxin family protein similar to p... 56 1e-08
At4g27080.1 68417.m03893 thioredoxin family protein contains Pfa... 54 1e-07
At4g21990.1 68417.m03183 5'-adenylylsulfate reductase (APR3) / P... 51 7e-07
At4g04610.1 68417.m00674 5'-adenylylsulfate reductase (APR1) / P... 50 2e-06
At1g15020.2 68414.m01795 thioredoxin family protein low similari... 49 3e-06
At1g15020.1 68414.m01794 thioredoxin family protein low similari... 49 3e-06
At1g62180.1 68414.m07014 5'-adenylylsulfate reductase 2, chlorop... 48 5e-06
At2g01270.1 68415.m00040 thioredoxin family protein low similari... 48 6e-06
At1g50320.1 68414.m05641 thioredoxin x nearly identical to thior... 48 6e-06
At3g20560.1 68416.m02603 thioredoxin family protein contains Pfa... 46 1e-05
At1g08570.1 68414.m00950 thioredoxin family protein contains Pfa... 46 1e-05
At5g16400.1 68418.m01917 thioredoxin, putative similar to SP|P29... 45 3e-05
At2g15570.1 68415.m01783 thioredoxin M-type 3, chloroplast (TRX-... 45 4e-05
At3g02730.1 68416.m00265 thioredoxin, putative similar to SP|P29... 44 6e-05
At2g33270.1 68415.m04078 thioredoxin family protein contains Pfa... 44 8e-05
At1g50950.1 68414.m05728 thioredoxin-related contains weak hit t... 44 8e-05
At1g34780.1 68414.m04329 protein disulfide isomerase-related con... 44 8e-05
At1g19730.1 68414.m02465 thioredoxin H-type 4 (TRX-H-4) (GREN) i... 44 8e-05
At5g39950.1 68418.m04844 thioredoxin H-type 2 (TRX-H-2) (Gif2) i... 43 2e-04
At4g08930.1 68417.m01470 thioredoxin-related contains weak simil... 43 2e-04
At3g51030.1 68416.m05587 thioredoxin H-type 1 (TRX-H-1) identica... 42 2e-04
At1g45145.1 68414.m05175 thioredoxin H-type 5 (TRX-H-5) (TOUL) i... 42 3e-04
At4g26160.1 68417.m03765 thioredoxin family protein low similari... 42 4e-04
At5g61440.1 68418.m07709 thioredoxin family protein low similari... 41 5e-04
At4g12170.1 68417.m01934 thioredoxin family protein similar to S... 40 0.001
At1g69880.1 68414.m08042 thioredoxin, putative similar to SP|Q38... 40 0.001
At2g41680.1 68415.m05149 thioredoxin reductase, putative / NADPH... 39 0.002
At5g42980.1 68418.m05242 thioredoxin H-type 3 (TRX-H-3) (GIF1) i... 38 0.004
At1g52990.1 68414.m05997 thioredoxin family protein similar to S... 38 0.005
At4g37200.1 68417.m05266 thioredoxin family protein contains Pfa... 37 0.009
At3g06730.1 68416.m00798 thioredoxin family protein contains Pfa... 37 0.009
At3g17880.1 68416.m02278 tetratricoredoxin (TDX) identical to te... 36 0.015
At1g59730.1 68414.m06725 thioredoxin, putative similar to SP|Q38... 36 0.015
At4g29670.2 68417.m04227 thioredoxin family protein contains Pfa... 36 0.020
At4g29670.1 68417.m04226 thioredoxin family protein contains Pfa... 36 0.020
At3g56420.1 68416.m06275 thioredoxin family protein similar to t... 34 0.062
At3g03860.1 68416.m00398 expressed protein 34 0.062
At3g08710.1 68416.m01012 thioredoxin family protein similar to t... 32 0.25
At5g06690.1 68418.m00756 thioredoxin family protein low similiar... 32 0.33
At3g53220.1 68416.m05864 thioredoxin family protein low similari... 31 0.58
At4g30610.1 68417.m04342 serine carboxypeptidase S10 family prot... 31 0.77
At2g35010.1 68415.m04295 thioredoxin family protein similar to S... 31 0.77
At3g07990.1 68416.m00976 serine carboxypeptidase S10 family prot... 30 1.0
At4g38600.1 68417.m05464 HECT-domain-containing protein / ubiqui... 29 2.3
At1g31020.1 68414.m03798 thioredoxin o (TRXO2) similar to thiore... 29 2.3
At5g08260.1 68418.m00971 serine carboxypeptidase S10 family prot... 28 4.1
At2g24010.1 68415.m02868 serine carboxypeptidase S10 family prot... 28 4.1
At4g38600.2 68417.m05463 HECT-domain-containing protein / ubiqui... 27 7.1
>At1g04980.1 68414.m00497 thioredoxin family protein similar to
SP|Q63081 Protein disulfide isomerase A6 precursor (EC
5.3.4.1) {Rattus norvegicus}; contains Pfam profile
PF00085: Thioredoxin
Length = 443
Score = 132 bits (319), Expect = 2e-31
Identities = 61/102 (59%), Positives = 74/102 (72%), Gaps = 1/102 (0%)
Frame = +1
Query: 157 ALYDSSSDVIELTPSNFDKLVTNSDEIWIIEFFAPWCGHCKSLVPEYKKAARALKGIVKV 336
ALY SSS V++LTPSNF V NS+ + ++EFFAPWCGHC+SL P ++K A LKGI V
Sbjct: 22 ALYGSSSPVLQLTPSNFKSKVLNSNGVVLVEFFAPWCGHCQSLTPTWEKVASTLKGIATV 81
Query: 337 GALDADEHRSVSQKYGVTGFPTIKIFT-GSKHTPYQGQRTAE 459
A+DAD H+SVSQ YGV GFPTIK+F G YQG R A+
Sbjct: 82 AAIDADAHKSVSQDYGVRGFPTIKVFVPGKPPIDYQGARDAK 123
Score = 120 bits (288), Expect = 1e-27
Identities = 52/93 (55%), Positives = 68/93 (73%), Gaps = 2/93 (2%)
Frame = +1
Query: 184 IELTPSNFDKLVTNSDEIWIIEFFAPWCGHCKSLVPEYKKAARALKGIVKVGALDADEHR 363
+EL SNFD+LVT S E+WI+EFFAPWCGHCK L PE+KKAA LKG VK+G ++ D +
Sbjct: 166 VELNSSNFDELVTESKELWIVEFFAPWCGHCKKLAPEWKKAANNLKGKVKLGHVNCDAEQ 225
Query: 364 SVSQKYGVTGFPTIKIFTGSKHT--PYQGQRTA 456
S+ ++ V GFPTI +F K + PY+G R+A
Sbjct: 226 SIKSRFKVQGFPTILVFGSDKSSPVPYEGARSA 258
>At2g32920.1 68415.m04036 thioredoxin family protein similar to
SP|Q15084 Protein disulfide isomerase A6 precursor (EC
5.3.4.1) {Homo sapiens}; contains Pfam profile PF00085:
Thioredoxin
Length = 440
Score = 126 bits (305), Expect = 8e-30
Identities = 57/104 (54%), Positives = 73/104 (70%), Gaps = 1/104 (0%)
Frame = +1
Query: 151 SLALYDSSSDVIELTPSNFDKLVTNSDEIWIIEFFAPWCGHCKSLVPEYKKAARALKGIV 330
S ALY SSS V++LT SNF V NS+ + ++EFFAPWCGHCK+L P ++K A LKG+
Sbjct: 22 SSALYGSSSPVVQLTASNFKSKVLNSNGVVLVEFFAPWCGHCKALTPTWEKVANILKGVA 81
Query: 331 KVGALDADEHRSVSQKYGVTGFPTIKIFT-GSKHTPYQGQRTAE 459
V A+DAD H+S +Q YG+ GFPTIK+F G YQG R A+
Sbjct: 82 TVAAIDADAHQSAAQDYGIKGFPTIKVFVPGKAPIDYQGARDAK 125
Score = 114 bits (275), Expect = 4e-26
Identities = 52/105 (49%), Positives = 71/105 (67%), Gaps = 2/105 (1%)
Frame = +1
Query: 148 GSLALYDSSSDVIELTPSNFDKLVTNSDEIWIIEFFAPWCGHCKSLVPEYKKAARALKGI 327
GS S +EL SNFD LV S+E+WI+EFFAPWCGHCK L PE+K+AA+ L+G
Sbjct: 153 GSKEKKSEPSASVELNASNFDDLVIESNELWIVEFFAPWCGHCKKLAPEWKRAAKNLQGK 212
Query: 328 VKVGALDADEHRSVSQKYGVTGFPTIKIFTGSKHT--PYQGQRTA 456
VK+G ++ D +S+ ++ V GFPTI +F K + PY+G R+A
Sbjct: 213 VKLGHVNCDVEQSIMSRFKVQGFPTILVFGPDKSSPYPYEGARSA 257
>At2g47470.2 68415.m05924 thioredoxin family protein similar to
protein disulfide isomerase [Dictyostelium discoideum]
GI:2627440; contains Pfam profile: PF00085 Thioredoxin
Length = 266
Score = 102 bits (244), Expect = 2e-22
Identities = 47/102 (46%), Positives = 67/102 (65%), Gaps = 5/102 (4%)
Frame = +1
Query: 178 DVIELTPSNFDKLVTNSDEIWIIEFFAPWCGHCKSLVPEYKKAARALK---GIVKVGALD 348
+V+ LTP NFD++V + ++ ++EF+APWCGHCKSL P Y+K A K G+V + LD
Sbjct: 142 NVVVLTPDNFDEIVLDQNKDVLVEFYAPWCGHCKSLAPTYEKVATVFKQEEGVV-IANLD 200
Query: 349 ADEHRSVSQKYGVTGFPTIKIFTGSKHT--PYQGQRTAEGFV 468
AD H+++ +KYGV+GFPT+K F Y G R + FV
Sbjct: 201 ADAHKALGEKYGVSGFPTLKFFPKDNKAGHDYDGGRDLDDFV 242
Score = 91.1 bits (216), Expect = 5e-19
Identities = 45/100 (45%), Positives = 62/100 (62%), Gaps = 4/100 (4%)
Frame = +1
Query: 172 SSDVIELTPSNFDKLVTNSDEIWIIEFFAPWCGHCKSLVPEYKKAARALKGI--VKVGAL 345
+ DV+ LT +F+K V D+ ++EF+APWCGHCK L PEY+K + K V + +
Sbjct: 22 ADDVVVLTDDSFEKEV-GKDKGALVEFYAPWCGHCKKLAPEYEKLGASFKKAKSVLIAKV 80
Query: 346 DADEHRSVSQKYGVTGFPTIKIFTGSKHTP--YQGQRTAE 459
D DE +SV KYGV+G+PTI+ F P Y+G R AE
Sbjct: 81 DCDEQKSVCTKYGVSGYPTIQWFPKGSLEPQKYEGPRNAE 120
>At2g47470.1 68415.m05925 thioredoxin family protein similar to
protein disulfide isomerase [Dictyostelium discoideum]
GI:2627440; contains Pfam profile: PF00085 Thioredoxin
Length = 361
Score = 102 bits (244), Expect = 2e-22
Identities = 47/102 (46%), Positives = 67/102 (65%), Gaps = 5/102 (4%)
Frame = +1
Query: 178 DVIELTPSNFDKLVTNSDEIWIIEFFAPWCGHCKSLVPEYKKAARALK---GIVKVGALD 348
+V+ LTP NFD++V + ++ ++EF+APWCGHCKSL P Y+K A K G+V + LD
Sbjct: 142 NVVVLTPDNFDEIVLDQNKDVLVEFYAPWCGHCKSLAPTYEKVATVFKQEEGVV-IANLD 200
Query: 349 ADEHRSVSQKYGVTGFPTIKIFTGSKHT--PYQGQRTAEGFV 468
AD H+++ +KYGV+GFPT+K F Y G R + FV
Sbjct: 201 ADAHKALGEKYGVSGFPTLKFFPKDNKAGHDYDGGRDLDDFV 242
Score = 91.1 bits (216), Expect = 5e-19
Identities = 45/100 (45%), Positives = 62/100 (62%), Gaps = 4/100 (4%)
Frame = +1
Query: 172 SSDVIELTPSNFDKLVTNSDEIWIIEFFAPWCGHCKSLVPEYKKAARALKGI--VKVGAL 345
+ DV+ LT +F+K V D+ ++EF+APWCGHCK L PEY+K + K V + +
Sbjct: 22 ADDVVVLTDDSFEKEV-GKDKGALVEFYAPWCGHCKKLAPEYEKLGASFKKAKSVLIAKV 80
Query: 346 DADEHRSVSQKYGVTGFPTIKIFTGSKHTP--YQGQRTAE 459
D DE +SV KYGV+G+PTI+ F P Y+G R AE
Sbjct: 81 DCDEQKSVCTKYGVSGYPTIQWFPKGSLEPQKYEGPRNAE 120
>At5g60640.2 68418.m07611 thioredoxin family protein similar to
protein disulfide isomerase GI:5902592 from [Volvox
carteri f. nagariensis], GI:2708314 from Chlamydomonas
reinhardtii; contains Pfam profile: PF00085 Thioredoxin
Length = 536
Score = 94.7 bits (225), Expect = 4e-20
Identities = 44/99 (44%), Positives = 62/99 (62%), Gaps = 2/99 (2%)
Frame = +1
Query: 178 DVIELTPSNFDKLVTNSDEIWIIEFFAPWCGHCKSLVPEYKKAARALK--GIVKVGALDA 351
DV+ + NF ++ N+ + ++EF+APWCGHC+SL PEY AA LK G+V + +DA
Sbjct: 104 DVVVIKERNFTDVIENNQYV-LVEFYAPWCGHCQSLAPEYAAAATELKEDGVV-LAKIDA 161
Query: 352 DEHRSVSQKYGVTGFPTIKIFTGSKHTPYQGQRTAEGFV 468
E ++Q+Y V GFPT+ F +H PY G RT E V
Sbjct: 162 TEENELAQEYRVQGFPTLLFFVDGEHKPYTGGRTKETIV 200
Score = 63.3 bits (147), Expect = 1e-10
Identities = 30/88 (34%), Positives = 45/88 (51%)
Frame = +1
Query: 169 SSSDVIELTPSNFDKLVTNSDEIWIIEFFAPWCGHCKSLVPEYKKAARALKGIVKVGALD 348
+ DV + NFD++V + + ++E +APWCGHC++L P Y K A+ L+ I +
Sbjct: 439 NDEDVKIVVGDNFDEIVLDDSKDVLLEVYAPWCGHCQALEPMYNKLAKHLRSIDSLVITK 498
Query: 349 ADEHRSVSQKYGVTGFPTIKIFTGSKHT 432
D + K GFPTI F T
Sbjct: 499 MDGTTNEHPKAKAEGFPTILFFPAGNKT 526
>At5g60640.1 68418.m07610 thioredoxin family protein similar to
protein disulfide isomerase GI:5902592 from [Volvox
carteri f. nagariensis], GI:2708314 from Chlamydomonas
reinhardtii; contains Pfam profile: PF00085 Thioredoxin
Length = 597
Score = 94.7 bits (225), Expect = 4e-20
Identities = 44/99 (44%), Positives = 62/99 (62%), Gaps = 2/99 (2%)
Frame = +1
Query: 178 DVIELTPSNFDKLVTNSDEIWIIEFFAPWCGHCKSLVPEYKKAARALK--GIVKVGALDA 351
DV+ + NF ++ N+ + ++EF+APWCGHC+SL PEY AA LK G+V + +DA
Sbjct: 104 DVVVIKERNFTDVIENNQYV-LVEFYAPWCGHCQSLAPEYAAAATELKEDGVV-LAKIDA 161
Query: 352 DEHRSVSQKYGVTGFPTIKIFTGSKHTPYQGQRTAEGFV 468
E ++Q+Y V GFPT+ F +H PY G RT E V
Sbjct: 162 TEENELAQEYRVQGFPTLLFFVDGEHKPYTGGRTKETIV 200
Score = 63.3 bits (147), Expect = 1e-10
Identities = 30/88 (34%), Positives = 45/88 (51%)
Frame = +1
Query: 169 SSSDVIELTPSNFDKLVTNSDEIWIIEFFAPWCGHCKSLVPEYKKAARALKGIVKVGALD 348
+ DV + NFD++V + + ++E +APWCGHC++L P Y K A+ L+ I +
Sbjct: 439 NDEDVKIVVGDNFDEIVLDDSKDVLLEVYAPWCGHCQALEPMYNKLAKHLRSIDSLVITK 498
Query: 349 ADEHRSVSQKYGVTGFPTIKIFTGSKHT 432
D + K GFPTI F T
Sbjct: 499 MDGTTNEHPKAKAEGFPTILFFPAGNKT 526
>At3g54960.1 68416.m06094 thioredoxin family protein similar to
protein disulfide isomerase GI:5902592 from [Volvox
carteri f. nagariensis], GI:2708314 from Chlamydomonas
reinhardtii; contains Pfam profile: PF00085 Thioredoxin
Length = 579
Score = 94.3 bits (224), Expect = 5e-20
Identities = 43/98 (43%), Positives = 61/98 (62%), Gaps = 1/98 (1%)
Frame = +1
Query: 178 DVIELTPSNFDKLVTNSDEIWIIEFFAPWCGHCKSLVPEYKKAARALKGIVKVGALDADE 357
DV LT NF + V N+ ++EF+APWCG C++L PEY AA LKG+ + +DA E
Sbjct: 100 DVAVLTKDNFTEFVGNNS-FAMVEFYAPWCGACQALTPEYAAAATELKGLAALAKIDATE 158
Query: 358 HRSVSQKYGVTGFPTIKIFT-GSKHTPYQGQRTAEGFV 468
++QKY + GFPT+ +F G Y+G+RT +G V
Sbjct: 159 EGDLAQKYEIQGFPTVFLFVDGEMRKTYEGERTKDGIV 196
Score = 66.5 bits (155), Expect = 1e-11
Identities = 30/85 (35%), Positives = 46/85 (54%)
Frame = +1
Query: 166 DSSSDVIELTPSNFDKLVTNSDEIWIIEFFAPWCGHCKSLVPEYKKAARALKGIVKVGAL 345
++ DV + +NFD++V + + ++E +APWCGHC+S P Y K + LKGI +
Sbjct: 434 NNDGDVKVIVGNNFDEIVLDESKDVLLEIYAPWCGHCQSFEPIYNKLGKYLKGIDSLVVA 493
Query: 346 DADEHRSVSQKYGVTGFPTIKIFTG 420
D + + GFPTI F G
Sbjct: 494 KMDGTSNEHPRAKADGFPTILFFPG 518
>At1g21750.2 68414.m02723 protein disulfide isomerase, putative
similar to SP|P29828 Protein disulfide isomerase
precursor (PDI) (EC 5.3.4.1) {Medicago sativa}; isoform
contains non-consensus GA donor splice site at intron 9
Length = 487
Score = 86.6 bits (205), Expect = 1e-17
Identities = 51/119 (42%), Positives = 67/119 (56%), Gaps = 8/119 (6%)
Frame = +1
Query: 136 LCATGSLALYDSSSD-VIELTPSNFDKLVTNSDEIWIIEFFAPWCGHCKSLVPEYKKAAR 312
LCA+ + + + V+ L +NF + D I ++EF+APWCGHCK L PEY+KAA
Sbjct: 16 LCASSIRSEETETKEFVLTLDHTNFTDTINKHDFI-VVEFYAPWCGHCKQLAPEYEKAAS 74
Query: 313 ALKGIVK---VGALDADE--HRSVSQKYGVTGFPTIKIFT--GSKHTPYQGQRTAEGFV 468
AL V + +DA E +R + +Y V GFPTIKIF G Y G R AEG V
Sbjct: 75 ALSSNVPPVVLAKIDASEETNREFATQYEVQGFPTIKIFRNGGKAVQEYNGPREAEGIV 133
Score = 58.8 bits (136), Expect = 3e-09
Identities = 32/101 (31%), Positives = 52/101 (51%), Gaps = 3/101 (2%)
Frame = +1
Query: 166 DSSSDVIELTPSNFDKLVTNSDEIWIIEFFAPWCGHCKSLVPEYKKAARALK--GIVKVG 339
+++ V + + D +V NS + ++EF+APWCGHC+ L P + A + + V +
Sbjct: 371 ENNEPVKVVVSDSLDDIVLNSGKNVLLEFYAPWCGHCQKLAPILDEVAVSYQSDSSVVIA 430
Query: 340 ALDADEHRSVSQKYGVTGFPTIKIFTGSKH-TPYQGQRTAE 459
LDA + + V GFPTI + S + Y+G R E
Sbjct: 431 KLDATANDFPKDTFDVKGFPTIYFKSASGNVVVYEGDRQRE 471
>At1g21750.1 68414.m02722 protein disulfide isomerase, putative
similar to SP|P29828 Protein disulfide isomerase
precursor (PDI) (EC 5.3.4.1) {Medicago sativa}; isoform
contains non-consensus GA donor splice site at intron 9
Length = 501
Score = 86.6 bits (205), Expect = 1e-17
Identities = 51/119 (42%), Positives = 67/119 (56%), Gaps = 8/119 (6%)
Frame = +1
Query: 136 LCATGSLALYDSSSD-VIELTPSNFDKLVTNSDEIWIIEFFAPWCGHCKSLVPEYKKAAR 312
LCA+ + + + V+ L +NF + D I ++EF+APWCGHCK L PEY+KAA
Sbjct: 16 LCASSIRSEETETKEFVLTLDHTNFTDTINKHDFI-VVEFYAPWCGHCKQLAPEYEKAAS 74
Query: 313 ALKGIVK---VGALDADE--HRSVSQKYGVTGFPTIKIFT--GSKHTPYQGQRTAEGFV 468
AL V + +DA E +R + +Y V GFPTIKIF G Y G R AEG V
Sbjct: 75 ALSSNVPPVVLAKIDASEETNREFATQYEVQGFPTIKIFRNGGKAVQEYNGPREAEGIV 133
Score = 64.5 bits (150), Expect = 5e-11
Identities = 34/104 (32%), Positives = 55/104 (52%), Gaps = 3/104 (2%)
Frame = +1
Query: 166 DSSSDVIELTPSNFDKLVTNSDEIWIIEFFAPWCGHCKSLVPEYKKAARALK--GIVKVG 339
+++ V + + D +V NS + ++EF+APWCGHC+ L P + A + + V +
Sbjct: 371 ENNEPVKVVVSDSLDDIVLNSGKNVLLEFYAPWCGHCQKLAPILDEVAVSYQSDSSVVIA 430
Query: 340 ALDADEHRSVSQKYGVTGFPTIKIFTGSKH-TPYQGQRTAEGFV 468
LDA + + V GFPTI + S + Y+G RT E F+
Sbjct: 431 KLDATANDFPKDTFDVKGFPTIYFKSASGNVVVYEGDRTKEDFI 474
>At1g77510.1 68414.m09026 protein disulfide isomerase, putative
similar to protein disulfide isomerase precursor
GB:P29828 GI:4704766 [Medicago sativa]; Pfam HMM hit:
PF00085 Thioredoxins
Length = 508
Score = 80.6 bits (190), Expect = 7e-16
Identities = 44/120 (36%), Positives = 66/120 (55%), Gaps = 7/120 (5%)
Frame = +1
Query: 130 ILLCATGSLALYDSSSDVIELTPSNFDKLVTNSDEIWIIEFFAPWCGHCKSLVPEYKKAA 309
+L S+ ++ V+ L SNF + ++ D I ++EF+APWCGHC+ L PEY+KAA
Sbjct: 14 LLSLFVSSIRSEETKEFVLTLDHSNFTETISKHDFI-VVEFYAPWCGHCQKLAPEYEKAA 72
Query: 310 RALKG---IVKVGALDADE--HRSVSQKYGVTGFPTIKIFT--GSKHTPYQGQRTAEGFV 468
L + + +DA E ++ + +Y + GFPT+KI G Y G R AEG V
Sbjct: 73 SELSSHNPPLALAKIDASEEANKEFANEYKIQGFPTLKILRNGGKSVQDYNGPREAEGIV 132
Score = 64.5 bits (150), Expect = 5e-11
Identities = 35/104 (33%), Positives = 55/104 (52%), Gaps = 3/104 (2%)
Frame = +1
Query: 166 DSSSDVIELTPSNFDKLVTNSDEIWIIEFFAPWCGHCKSLVPEYKKAARALKG--IVKVG 339
+++ V + + D +V S + +IEF+APWCGHC+ L P + A + + V +
Sbjct: 369 ENNEPVKVVVAESLDDIVFKSGKNVLIEFYAPWCGHCQKLAPILDEVALSFQNDPSVIIA 428
Query: 340 ALDADEHRSVSQKYGVTGFPTIKIFTGSKH-TPYQGQRTAEGFV 468
LDA + S + V GFPTI + S + Y+G RT E F+
Sbjct: 429 KLDATANDIPSDTFDVKGFPTIYFRSASGNVVVYEGDRTKEDFI 472
>At1g35620.1 68414.m04425 thioredoxin family protein similar to
SP|Q43116 Protein disulfide isomerase precursor (PDI)
(EC 5.3.4.1) {Ricinus communis}; contains Pfam profile
PF00085: Thioredoxin
Length = 440
Score = 75.8 bits (178), Expect = 2e-14
Identities = 37/96 (38%), Positives = 57/96 (59%), Gaps = 3/96 (3%)
Frame = +1
Query: 181 VIELTPSNFDKLVTNSDEIWIIEFFAPWCGHCKSLVPEYKKAA---RALKGIVKVGALDA 351
V+ELT SNFD ++ D I++ +F+APWCGHCK L PE AA LK + + L+A
Sbjct: 34 VLELTDSNFDSAISTFDCIFV-DFYAPWCGHCKRLNPELDAAAPILAKLKQPIVIAKLNA 92
Query: 352 DEHRSVSQKYGVTGFPTIKIFTGSKHTPYQGQRTAE 459
D++ +++K + FPT+ ++ Y G R A+
Sbjct: 93 DKYSRLARKIEIDAFPTLMLYNHGVPMEYYGPRKAD 128
>At1g07960.3 68414.m00867 thioredoxin family protein low similarity
to protein disulfide isomerase 4 [Giardia intestinalis]
GI:13489047; contains Pfam profile PF00085: Thioredoxin
Length = 146
Score = 70.1 bits (164), Expect = 1e-12
Identities = 32/98 (32%), Positives = 53/98 (54%), Gaps = 3/98 (3%)
Frame = +1
Query: 175 SDVIELTPSNFDKLVTNSDEIWIIEFFAPWCGHCKSLVPEYKKAARALKG--IVKVGALD 348
++VI LTP F + D W ++F PWC HCK L ++ +A++G ++VG +D
Sbjct: 25 AEVITLTPETFSDKIKEKDTAWFVKFCVPWCKHCKKLGNLWEDLGKAMEGDDEIEVGEVD 84
Query: 349 ADEHRSVSQKYGVTGFPTIKIF-TGSKHTPYQGQRTAE 459
R+V K + +PT +F G + + Y+G+R E
Sbjct: 85 CGTSRAVCTKVEIHSYPTFMLFYNGEEVSKYKGKRDVE 122
>At1g07960.2 68414.m00866 thioredoxin family protein low similarity
to protein disulfide isomerase 4 [Giardia intestinalis]
GI:13489047; contains Pfam profile PF00085: Thioredoxin
Length = 146
Score = 70.1 bits (164), Expect = 1e-12
Identities = 32/98 (32%), Positives = 53/98 (54%), Gaps = 3/98 (3%)
Frame = +1
Query: 175 SDVIELTPSNFDKLVTNSDEIWIIEFFAPWCGHCKSLVPEYKKAARALKG--IVKVGALD 348
++VI LTP F + D W ++F PWC HCK L ++ +A++G ++VG +D
Sbjct: 25 AEVITLTPETFSDKIKEKDTAWFVKFCVPWCKHCKKLGNLWEDLGKAMEGDDEIEVGEVD 84
Query: 349 ADEHRSVSQKYGVTGFPTIKIF-TGSKHTPYQGQRTAE 459
R+V K + +PT +F G + + Y+G+R E
Sbjct: 85 CGTSRAVCTKVEIHSYPTFMLFYNGEEVSKYKGKRDVE 122
>At1g07960.1 68414.m00865 thioredoxin family protein low similarity
to protein disulfide isomerase 4 [Giardia intestinalis]
GI:13489047; contains Pfam profile PF00085: Thioredoxin
Length = 146
Score = 70.1 bits (164), Expect = 1e-12
Identities = 32/98 (32%), Positives = 53/98 (54%), Gaps = 3/98 (3%)
Frame = +1
Query: 175 SDVIELTPSNFDKLVTNSDEIWIIEFFAPWCGHCKSLVPEYKKAARALKG--IVKVGALD 348
++VI LTP F + D W ++F PWC HCK L ++ +A++G ++VG +D
Sbjct: 25 AEVITLTPETFSDKIKEKDTAWFVKFCVPWCKHCKKLGNLWEDLGKAMEGDDEIEVGEVD 84
Query: 349 ADEHRSVSQKYGVTGFPTIKIF-TGSKHTPYQGQRTAE 459
R+V K + +PT +F G + + Y+G+R E
Sbjct: 85 CGTSRAVCTKVEIHSYPTFMLFYNGEEVSKYKGKRDVE 122
>At1g43560.1 68414.m05000 thioredoxin family protein contains Pfam
profile: PF00085 Thioredoxin; similar to thioredoxin
GI:142153 from [Synechococcus PCC6301]
Length = 167
Score = 66.1 bits (154), Expect = 2e-11
Identities = 27/78 (34%), Positives = 48/78 (61%)
Frame = +1
Query: 193 TPSNFDKLVTNSDEIWIIEFFAPWCGHCKSLVPEYKKAARALKGIVKVGALDADEHRSVS 372
T ++FD L+ NSD+ +++F+A WCG C+ +VP + + LK I+ V +D +++ S++
Sbjct: 64 TFNSFDDLLQNSDKPVLVDFYATWCGPCQLMVPILNEVSETLKDIIAVVKIDTEKYPSLA 123
Query: 373 QKYGVTGFPTIKIFTGSK 426
KY + PT +F K
Sbjct: 124 NKYQIEALPTFILFKDGK 141
>At1g03680.1 68414.m00347 thioredoxin M-type 1, chloroplast (TRX-M1)
nearly identical to SP|O48737 Thioredoxin M-type 1,
chloroplast precursor (TRX-M1) {Arabidopsis thaliana};
similar to ESTs gb|T13714, gb|H76398, gb|N37762,
gb|AA042639, gb|T21104, emb|Z30901
Length = 179
Score = 64.5 bits (150), Expect = 5e-11
Identities = 30/87 (34%), Positives = 47/87 (54%)
Frame = +1
Query: 166 DSSSDVIELTPSNFDKLVTNSDEIWIIEFFAPWCGHCKSLVPEYKKAARALKGIVKVGAL 345
D+++ + + S +D LV +DE ++F+APWCG CK + P + A+ G K L
Sbjct: 71 DTATGIPVVNDSTWDSLVLKADEPVFVDFWAPWCGPCKMIDPIVNELAQKYAGQFKFYKL 130
Query: 346 DADEHRSVSQKYGVTGFPTIKIFTGSK 426
+ DE + +YGV PTI IF +
Sbjct: 131 NTDESPATPGQYGVRSIPTIMIFVNGE 157
>At4g03520.1 68417.m00480 thioredoxin M-type 2, chloroplast (TRX-M2)
nearly identical to SP|Q9SEU8 Thioredoxin M-type 2,
chloroplast precursor (TRX-M2) {Arabidopsis thaliana}
Length = 186
Score = 64.1 bits (149), Expect = 7e-11
Identities = 29/87 (33%), Positives = 48/87 (55%)
Frame = +1
Query: 166 DSSSDVIELTPSNFDKLVTNSDEIWIIEFFAPWCGHCKSLVPEYKKAARALKGIVKVGAL 345
++++D+ + S +D LV + +++F+APWCG CK + P A+ G +K L
Sbjct: 77 ETTTDIQVVNDSTWDSLVLKATGPVVVDFWAPWCGPCKMIDPLVNDLAQHYTGKIKFYKL 136
Query: 346 DADEHRSVSQKYGVTGFPTIKIFTGSK 426
+ DE + +YGV PTI IF G +
Sbjct: 137 NTDESPNTPGQYGVRSIPTIMIFVGGE 163
>At1g76760.1 68414.m08933 thioredoxin family protein similar to
thioredoxin CH2, M-type, chloroplast precursor GB:P23400
SP|P23400 [Chlamydomonas reinhardtii]; contains Pfam
profile: PF00085 Thioredoxin
Length = 172
Score = 63.3 bits (147), Expect = 1e-10
Identities = 27/93 (29%), Positives = 54/93 (58%), Gaps = 1/93 (1%)
Frame = +1
Query: 193 TPSNFDKLVTNSDEIWIIEFFAPWCGHCKSLVPEYKKAARALKGIVKVGALDADEHRSVS 372
T +F+ L+ NSD+ +++++A WCG C+ +VP + + LK ++V +D +++ S++
Sbjct: 69 TFDSFEDLLVNSDKPVLVDYYATWCGPCQFMVPILNEVSETLKDKIQVVKIDTEKYPSIA 128
Query: 373 QKYGVTGFPTIKIF-TGSKHTPYQGQRTAEGFV 468
KY + PT +F G ++G TA+ +
Sbjct: 129 NKYKIEALPTFILFKDGEPCDRFEGALTAKQLI 161
>At1g52260.1 68414.m05897 thioredoxin family protein similar to
protein disulfide isomerase GI:5902592 from [Volvox
carteri f. nagariensis], GI:2708314 from Chlamydomonas
reinhardtii; contains Pfam profile: PF00085 Thioredoxin
Length = 537
Score = 60.9 bits (141), Expect = 6e-10
Identities = 31/99 (31%), Positives = 52/99 (52%), Gaps = 3/99 (3%)
Frame = +1
Query: 181 VIELTPSNFDKLVTNSDEIWIIEFFAPWCGHCKSLVPEYKKAARALKGI---VKVGALDA 351
V+EL ++ K V + +E ++ +APWC L+P + +AA ALK I V + +D
Sbjct: 79 VLELN-GDYTKRVIDGNEFVMVLGYAPWCARSAELMPRFAEAATALKEIGSSVLMAKIDG 137
Query: 352 DEHRSVSQKYGVTGFPTIKIFTGSKHTPYQGQRTAEGFV 468
D + ++ + + GFPT+ +F Y G +AE V
Sbjct: 138 DRYSKIASELEIKGFPTLLLFVNGTSLTYNGGSSAEDIV 176
Score = 45.2 bits (102), Expect = 3e-05
Identities = 25/92 (27%), Positives = 45/92 (48%), Gaps = 2/92 (2%)
Frame = +1
Query: 166 DSSSDVIELTPSNFDKLVTNSDEIWIIEFFAPWCGHCKSLVPEYKKAARALKGIVKVGAL 345
+ ++ ++ + FD LV NS E ++E PWC +C++L + +K A+ KG +
Sbjct: 414 NENASIVTVVGKTFDGLVLNSRENVLLEVHTPWCVNCEALSKQIEKLAKHFKGFENLVFA 473
Query: 346 DADEHRSVSQKYGVTG-FPTIKIF-TGSKHTP 435
D + K V +P I ++ +G K P
Sbjct: 474 RIDASANEHTKLQVDDKYPIILLYKSGEKEKP 505
>At3g15360.1 68416.m01948 thioredoxin M-type 4, chloroplast (TRX-M4)
nearly identical to SP|Q9SEU6 Thioredoxin M-type 4,
chloroplast precursor (TRX-M4) {Arabidopsis thaliana}
Length = 193
Score = 60.1 bits (139), Expect = 1e-09
Identities = 27/83 (32%), Positives = 45/83 (54%)
Frame = +1
Query: 178 DVIELTPSNFDKLVTNSDEIWIIEFFAPWCGHCKSLVPEYKKAARALKGIVKVGALDADE 357
+V L+ S + V SD ++EF+APWCG C+ + P + A+ G K ++ DE
Sbjct: 87 EVPNLSDSEWQTKVLESDVPVLVEFWAPWCGPCRMIHPIVDQLAKDFAGKFKFYKINTDE 146
Query: 358 HRSVSQKYGVTGFPTIKIFTGSK 426
+ + +YG+ PT+ IF G +
Sbjct: 147 SPNTANRYGIRSVPTVIIFKGGE 169
>At3g16110.1 68416.m02035 thioredoxin family protein similar to
protein disulfide isomerase GI:5902592 from [Volvox
carteri f. nagariensis], GI:2708314 from Chlamydomonas
reinhardtii; contains Pfam profile: PF00085 Thioredoxin
Length = 534
Score = 56.4 bits (130), Expect = 1e-08
Identities = 28/99 (28%), Positives = 51/99 (51%), Gaps = 3/99 (3%)
Frame = +1
Query: 181 VIELTPSNFDKLVTNSDEIWIIEFFAPWCGHCKSLVPEYKKAARALKGI---VKVGALDA 351
V+EL N +L+ ++ + ++ + APWC L+P + +AA LK I V + +D
Sbjct: 77 VVELNGDNTKRLIDGNEYVMVLGY-APWCARSAELMPRFAEAATDLKEIGSSVLMAKIDG 135
Query: 352 DEHRSVSQKYGVTGFPTIKIFTGSKHTPYQGQRTAEGFV 468
+ + V+ + + GFPT+ +F Y G ++E V
Sbjct: 136 ERYSKVASQLEIKGFPTLLLFVNGTSQSYTGGFSSEEIV 174
Score = 50.4 bits (115), Expect = 9e-07
Identities = 25/91 (27%), Positives = 46/91 (50%), Gaps = 1/91 (1%)
Frame = +1
Query: 166 DSSSDVIELTPSNFDKLVTNSDEIWIIEFFAPWCGHCKSLVPEYKKAARALKGIVKVGAL 345
+ ++ V+ + FD++V S E ++E PWC +C++L + +K ++ KG +
Sbjct: 413 NQNASVVAVVGRTFDEVVLRSSENVLLEVHTPWCINCEALSKQVEKLSQHFKGFENLVFA 472
Query: 346 DADEHRSVSQKYGVTGFPTIKIF-TGSKHTP 435
D + K V +PTI ++ TG K P
Sbjct: 473 RIDASANEHPKLTVDDYPTILLYKTGEKENP 503
>At4g27080.1 68417.m03893 thioredoxin family protein contains Pfam
PF00085: Thioredoxin
Length = 480
Score = 53.6 bits (123), Expect = 1e-07
Identities = 36/115 (31%), Positives = 55/115 (47%), Gaps = 18/115 (15%)
Frame = +1
Query: 178 DVIELTPSNFDKLVTNSDEIWIIEFFAPWCGHCKSLVPEYKKAARALK--------GIVK 333
D + LT NFD T+ I ++ F+APWC C L P ++KAA+ +K G V
Sbjct: 142 DSVPLTGRNFDTF-THQFPILVVNFYAPWCYWCNLLKPSWEKAAKQIKERYDPEMDGRVI 200
Query: 334 VGALDADEHRSVSQKYGVTGFPTIKIF-TGS---------KHTPYQGQRTAEGFV 468
+ +D + + ++ + G+P+I+IF GS H Y G R E V
Sbjct: 201 LAKVDCTQEGDLCRRNHIQGYPSIRIFRKGSDLKDDNAHHDHESYYGDRDTESLV 255
>At4g21990.1 68417.m03183 5'-adenylylsulfate reductase (APR3) / PAPS
reductase homolog (PRH26) identical to
5'-adenylylsulfate reductase [Arabidopsis thaliana]
GI:2738760; identical to cDNA PAPS reductase homolog
(PRH26) GI:1710113
Length = 458
Score = 50.8 bits (116), Expect = 7e-07
Identities = 30/102 (29%), Positives = 50/102 (49%), Gaps = 5/102 (4%)
Frame = +1
Query: 145 TGSLALYDSSSDVIELTPSNFDKLVT--NSDEIWIIEFFAPWCGHCKSLVPEYKKAARAL 318
T S+A +S +V+ L+ + L+ N E WI+ +APWC C+++ + + A L
Sbjct: 336 TASVADIFNSENVVNLSRQGIENLMKLENRKEAWIVVLYAPWCPFCQAMEASFDELADKL 395
Query: 319 KGI-VKVGAL--DADEHRSVSQKYGVTGFPTIKIFTGSKHTP 435
G VKV D D+ ++ + FPTI +F + P
Sbjct: 396 GGSGVKVAKFRADGDQKDFAKKELQLGSFPTILVFPKNSSRP 437
>At4g04610.1 68417.m00674 5'-adenylylsulfate reductase (APR1) / PAPS
reductase homolog (PRH19) identical to
5'-adenylylsulfate reductase [Arabidopsis thaliana]
GI:2738756; identical to cDNA PAPS reductase homolog
(PRH19) GI:1710111
Length = 465
Score = 49.6 bits (113), Expect = 2e-06
Identities = 27/93 (29%), Positives = 45/93 (48%), Gaps = 5/93 (5%)
Frame = +1
Query: 172 SSDVIELTPSNFDKLVT--NSDEIWIIEFFAPWCGHCKSLVPEYKKAARALKGI-VKVGA 342
S +++ L+ + L+ N E WI+ +APWC C+++ Y + A L G +KV
Sbjct: 352 SENLVTLSRQGIENLMKLENRKEPWIVVLYAPWCPFCQAMEASYDELADKLAGSGIKVAK 411
Query: 343 L--DADEHRSVSQKYGVTGFPTIKIFTGSKHTP 435
D D+ Q+ + FPTI +F + P
Sbjct: 412 FRADGDQKEFAKQELQLGSFPTILVFPKNSSRP 444
>At1g15020.2 68414.m01795 thioredoxin family protein low similarity
to FAD-dependent sulfhydryl oxidase-2 [Rattus
norvegicus] GI:12483919; contains Pfam profiles PF00085:
Thioredoxin, PF04777: Erv1 / Alr family
Length = 528
Score = 48.8 bits (111), Expect = 3e-06
Identities = 21/54 (38%), Positives = 31/54 (57%), Gaps = 1/54 (1%)
Frame = +1
Query: 166 DSSSDVIELTPSNFDKLVTNSDEIW-IIEFFAPWCGHCKSLVPEYKKAARALKG 324
D + IEL +NFD + +S + ++EFFA WC C++ P Y+K AR G
Sbjct: 38 DQKDNAIELNATNFDSVFQDSPAKYAVLEFFAHWCPACRNYKPHYEKVARLFNG 91
>At1g15020.1 68414.m01794 thioredoxin family protein low similarity
to FAD-dependent sulfhydryl oxidase-2 [Rattus
norvegicus] GI:12483919; contains Pfam profiles PF00085:
Thioredoxin, PF04777: Erv1 / Alr family
Length = 502
Score = 48.8 bits (111), Expect = 3e-06
Identities = 21/54 (38%), Positives = 31/54 (57%), Gaps = 1/54 (1%)
Frame = +1
Query: 166 DSSSDVIELTPSNFDKLVTNSDEIW-IIEFFAPWCGHCKSLVPEYKKAARALKG 324
D + IEL +NFD + +S + ++EFFA WC C++ P Y+K AR G
Sbjct: 38 DQKDNAIELNATNFDSVFQDSPAKYAVLEFFAHWCPACRNYKPHYEKVARLFNG 91
>At1g62180.1 68414.m07014 5'-adenylylsulfate reductase 2,
chloroplast (APR2) (APSR) / adenosine 5'-phosphosulfate
5'-adenylylsulfate (APS) sulfotransferase 2 /
3'-phosphoadenosine-5'-phosphosulfate (PAPS) reductase
homolog 43 (PRH-43) identical to SP|P92981
5'-adenylylsulfate reductase 2, chloroplast precursor
(EC 1.8.4.9) (Adenosine 5'-phosphosulfate
5'-adenylylsulfate sulfotransferase 2) (APS
sulfotransferase 2) (Thioredoxin independent APS
reductase 2) (3'-phosphoadenosine-5'-phosphosulfate
reductase homolog 43) (PAPS reductase homolog 43)
(Prh-43) {Arabidopsis thaliana}; identical to cDNA PAPS
reductase homolog (PRH43) GI:1710115
Length = 454
Score = 48.0 bits (109), Expect = 5e-06
Identities = 26/86 (30%), Positives = 44/86 (51%), Gaps = 5/86 (5%)
Frame = +1
Query: 172 SSDVIELTPSNFDKLVT--NSDEIWIIEFFAPWCGHCKSLVPEYKKAARALKGI-VKVGA 342
S++V+ L+ + L+ N E W++ +APWC C+++ Y + A L G VKV
Sbjct: 341 SNNVVALSKGGVENLLKLENRKEAWLVVLYAPWCPFCQAMEASYIELAEKLAGKGVKVAK 400
Query: 343 L--DADEHRSVSQKYGVTGFPTIKIF 414
D ++ Q+ + FPTI +F
Sbjct: 401 FRADGEQKEFAKQELQLGSFPTILLF 426
>At2g01270.1 68415.m00040 thioredoxin family protein low similarity
to quiescin [Homo sapiens] GI:13257405; contains Pfam
profiles PF00085: Thioredoxin, PF04777: Erv1 / Alr
family
Length = 495
Score = 47.6 bits (108), Expect = 6e-06
Identities = 19/54 (35%), Positives = 31/54 (57%), Gaps = 1/54 (1%)
Frame = +1
Query: 166 DSSSDVIELTPSNFDKLVTNSDEIW-IIEFFAPWCGHCKSLVPEYKKAARALKG 324
D +EL +NFD ++ ++ + ++EFFA WC C++ P Y+K AR G
Sbjct: 32 DQKDKAVELNTTNFDSVLKDTPAKYAVVEFFAHWCPACRNYKPHYEKVARLFNG 85
>At1g50320.1 68414.m05641 thioredoxin x nearly identical to
thioredoxin x GB:AAF15952 GI:6539616 from [Arabidopsis
thaliana]
Length = 182
Score = 47.6 bits (108), Expect = 6e-06
Identities = 29/108 (26%), Positives = 49/108 (45%), Gaps = 6/108 (5%)
Frame = +1
Query: 130 ILLCATGSLALYDSSSDVI------ELTPSNFDKLVTNSDEIWIIEFFAPWCGHCKSLVP 291
+L ++G+ SSS VI E+ S F V S + ++EF A WCG CK + P
Sbjct: 48 LLSLSSGARRTRKSSSSVIRCGGIKEIGESEFSSTVLESAQPVLVEFVATWCGPCKLIYP 107
Query: 292 EYKKAARALKGIVKVGALDADEHRSVSQKYGVTGFPTIKIFTGSKHTP 435
+ ++ + + +D D + + ++ V G P +F K P
Sbjct: 108 AMEALSQEYGDKLTIVKIDHDANPKLIAEFKVYGLPHFILFKDGKEVP 155
>At3g20560.1 68416.m02603 thioredoxin family protein contains Pfam
profile PF00085: Thioredoxin
Length = 483
Score = 46.4 bits (105), Expect = 1e-05
Identities = 27/85 (31%), Positives = 47/85 (55%), Gaps = 8/85 (9%)
Frame = +1
Query: 184 IELTPSNFDKLVTNSDEIWIIEFFAPWCGHCKSLVPEYKKAARALK--------GIVKVG 339
I LT ++F+ L ++ I ++ F APWC L P ++KAA +K G V +G
Sbjct: 144 IPLTSASFEAL-SHHFPILVVNFNAPWCYWSNRLKPSWEKAANIIKQRYDPEADGRVLLG 202
Query: 340 ALDADEHRSVSQKYGVTGFPTIKIF 414
+D E ++ ++ + G+P+I+IF
Sbjct: 203 NVDCTEEPALCKRNHIQGYPSIRIF 227
>At1g08570.1 68414.m00950 thioredoxin family protein contains Pfam
profile: PF00085 Thioredoxin; similar to ESTs gb|T46281,
gb|R83933, gb|N65879, emb|F14466, gb|N96726,
gb|AA042340, and emb|Z18150
Length = 275
Score = 46.4 bits (105), Expect = 1e-05
Identities = 22/73 (30%), Positives = 41/73 (56%)
Frame = +1
Query: 208 DKLVTNSDEIWIIEFFAPWCGHCKSLVPEYKKAARALKGIVKVGALDADEHRSVSQKYGV 387
D L D++ +++FF+P CG CK+L P+ + A + V+ ++ +EH+S+ GV
Sbjct: 110 DSLTNAGDKLVVVDFFSPGCGGCKALHPKICQFAE-MNPDVQFLQVNYEEHKSMCYSLGV 168
Query: 388 TGFPTIKIFTGSK 426
P + + GS+
Sbjct: 169 HVLPFFRFYRGSQ 181
>At5g16400.1 68418.m01917 thioredoxin, putative similar to SP|P29450
Thioredoxin F-type, chloroplast precursor (TRX-F) {Pisum
sativum}; contains Pfam profile: PF00085 Thioredoxin
Length = 185
Score = 45.2 bits (102), Expect = 3e-05
Identities = 21/83 (25%), Positives = 45/83 (54%), Gaps = 1/83 (1%)
Frame = +1
Query: 181 VIELTPSNFDKLVTNS-DEIWIIEFFAPWCGHCKSLVPEYKKAARALKGIVKVGALDADE 357
V E+ F +V + D+I +++ + WCG CK + P+YK+ + + +V + +
Sbjct: 80 VTEVDKDTFWPIVKAAGDKIVVLDMYTQWCGPCKVIAPKYKELSEKYQDMVFLKLDCNQD 139
Query: 358 HRSVSQKYGVTGFPTIKIFTGSK 426
++ ++++ G+ PT KI +K
Sbjct: 140 NKPLAKELGIRVVPTFKILKDNK 162
>At2g15570.1 68415.m01783 thioredoxin M-type 3, chloroplast (TRX-M3)
identical to SP|Q9SEU7 Thioredoxin M-type 3, chloroplast
precursor (TRX-M3) {Arabidopsis thaliana}
Length = 173
Score = 44.8 bits (101), Expect = 4e-05
Identities = 24/99 (24%), Positives = 45/99 (45%), Gaps = 1/99 (1%)
Frame = +1
Query: 175 SDVIELTPSNFDKLVTNSDEIWIIEFFAPWCGHCKSLVPEYKKAARALKGIVKVGALDAD 354
S E+T +++ V S+ ++EF+ WCG C+ + + A G + L+AD
Sbjct: 66 SRAAEVTQRSWEDSVLKSETPVLVEFYTSWCGPCRMVHRIIDEIAGDYAGKLNCYLLNAD 125
Query: 355 EHRSVSQKYGVTGFPTIKIF-TGSKHTPYQGQRTAEGFV 468
V+++Y + P + +F G K G E ++
Sbjct: 126 NDLPVAEEYEIKAVPVVLLFKNGEKRESIMGTMPKEFYI 164
>At3g02730.1 68416.m00265 thioredoxin, putative similar to SP|P29450
Thioredoxin F-type, chloroplast precursor (TRX-F) {Pisum
sativum}; contains Pfam profile: PF00085 Thioredoxin
Length = 178
Score = 44.4 bits (100), Expect = 6e-05
Identities = 24/88 (27%), Positives = 46/88 (52%), Gaps = 2/88 (2%)
Frame = +1
Query: 169 SSSDVIELTPSNFDKLVTNSDE-IWIIEFFAPWCGHCKSLVPEYKKAARALKGIVKVGAL 345
S V E+ F +V + E + +++ + WCG CK + P+YK + +V + L
Sbjct: 66 SVGQVTEVDKDTFWPIVKAAGEKLVVLDMYTQWCGPCKVIAPKYKALSEKYDDVVFL-KL 124
Query: 346 DAD-EHRSVSQKYGVTGFPTIKIFTGSK 426
D + ++R ++++ G+ PT KI +K
Sbjct: 125 DCNPDNRPLAKELGIRVVPTFKILKDNK 152
>At2g33270.1 68415.m04078 thioredoxin family protein contains Pfam
profile: PF00085 Thioredoxin
Length = 273
Score = 44.0 bits (99), Expect = 8e-05
Identities = 21/65 (32%), Positives = 37/65 (56%)
Frame = +1
Query: 229 DEIWIIEFFAPWCGHCKSLVPEYKKAARALKGIVKVGALDADEHRSVSQKYGVTGFPTIK 408
D++ +++FF+P CG CK+L P+ K A V+ ++ +EHRS+ Q + P +
Sbjct: 113 DKLVVVDFFSPSCGGCKALHPKICKIAEK-NPEVEFLQVNYEEHRSLCQSLNIHVLPFFR 171
Query: 409 IFTGS 423
+ GS
Sbjct: 172 FYRGS 176
>At1g50950.1 68414.m05728 thioredoxin-related contains weak hit to
Pfam PF00085: Thioredoxin; contains 2 predicted
transmembrane domains
Length = 484
Score = 44.0 bits (99), Expect = 8e-05
Identities = 25/85 (29%), Positives = 46/85 (54%), Gaps = 8/85 (9%)
Frame = +1
Query: 184 IELTPSNFDKLVTNSDEIWIIEFFAPWCGHCKSLVPEYKKAARALK--------GIVKVG 339
I LT + F+K T+ +I ++ F+APWC L P + KA++ + V +G
Sbjct: 145 IPLTGAAFEKF-THHFQILVVNFYAPWCYWSNRLKPSWVKASQITRERYNPGTDDRVLLG 203
Query: 340 ALDADEHRSVSQKYGVTGFPTIKIF 414
++D E ++ + + G+P+I+IF
Sbjct: 204 SVDCTEEPTLCKSNHIQGYPSIRIF 228
>At1g34780.1 68414.m04329 protein disulfide isomerase-related
contains weak similarity to Pfam:P08003 protein
disulfide isomerase A4 precursor (Protein ERp-72, ERp72)
[Mus musculus]
Length = 310
Score = 44.0 bits (99), Expect = 8e-05
Identities = 22/87 (25%), Positives = 36/87 (41%)
Frame = +1
Query: 208 DKLVTNSDEIWIIEFFAPWCGHCKSLVPEYKKAARALKGIVKVGALDADEHRSVSQKYGV 387
D + N + + F+A WC +S P + + I ++ S KYGV
Sbjct: 74 DMIHKNKCDYVALLFYASWCPFSRSFRPSFDVISSLYSSIPHFAIKESSIKPSTLSKYGV 133
Query: 388 TGFPTIKIFTGSKHTPYQGQRTAEGFV 468
GFPT+ + + Y+G R + V
Sbjct: 134 HGFPTLLLLNSTMRARYRGTRMLDSLV 160
>At1g19730.1 68414.m02465 thioredoxin H-type 4 (TRX-H-4) (GREN)
identical to SP|Q39239 Thioredoxin H-type 4 (TRX-H-4)
{Arabidopsis thaliana}
Length = 119
Score = 44.0 bits (99), Expect = 8e-05
Identities = 18/59 (30%), Positives = 33/59 (55%)
Frame = +1
Query: 226 SDEIWIIEFFAPWCGHCKSLVPEYKKAARALKGIVKVGALDADEHRSVSQKYGVTGFPT 402
S+++ +I+F A WC C+ + P + A+ +D DE +SV++++GV PT
Sbjct: 27 SNKLIVIDFTASWCPPCRMIAPIFNDLAKKFMSSAIFFKVDVDELQSVAKEFGVEAMPT 85
>At5g39950.1 68418.m04844 thioredoxin H-type 2 (TRX-H-2) (Gif2)
identical to SP|Q38879 Thioredoxin H-type 2 (TRX-H-2)
{Arabidopsis thaliana}; identical to cDNA (Gif2) mRNA
for thioredoxin GI:992963
Length = 133
Score = 42.7 bits (96), Expect = 2e-04
Identities = 20/70 (28%), Positives = 35/70 (50%)
Frame = +1
Query: 217 VTNSDEIWIIEFFAPWCGHCKSLVPEYKKAARALKGIVKVGALDADEHRSVSQKYGVTGF 396
+ S+++ +++F A WCG C+ + P A + V LD DE V++++ VT
Sbjct: 43 IKESNKLLVVDFSASWCGPCRMIEPAIHAMADKFNDVDFV-KLDVDELPDVAKEFNVTAM 101
Query: 397 PTIKIFTGSK 426
PT + K
Sbjct: 102 PTFVLVKRGK 111
>At4g08930.1 68417.m01470 thioredoxin-related contains weak
similarity to Swiss-Prot:Q39239 thioredoxin H-type 4
(TRX-H-4). [Mouse-ear cress]
Length = 295
Score = 42.7 bits (96), Expect = 2e-04
Identities = 20/73 (27%), Positives = 32/73 (43%)
Frame = +1
Query: 250 FFAPWCGHCKSLVPEYKKAARALKGIVKVGALDADEHRSVSQKYGVTGFPTIKIFTGSKH 429
F+A WC + + P + + + ++ S KYGV GFPTI + +
Sbjct: 81 FYASWCPFSRLVRPSFDLMSLLYSSVPHFAIEESSVKASTLSKYGVHGFPTIILMNSTML 140
Query: 430 TPYQGQRTAEGFV 468
Y+G RT + V
Sbjct: 141 VVYRGSRTLDSLV 153
>At3g51030.1 68416.m05587 thioredoxin H-type 1 (TRX-H-1) identical
to SP|P29448 Thioredoxin H-type 1 (TRX-H-1) {Arabidopsis
thaliana}
Length = 114
Score = 42.3 bits (95), Expect = 2e-04
Identities = 18/67 (26%), Positives = 34/67 (50%)
Frame = +1
Query: 226 SDEIWIIEFFAPWCGHCKSLVPEYKKAARALKGIVKVGALDADEHRSVSQKYGVTGFPTI 405
S + +++F A WCG C+ + P + A+ L ++ + +D DE +SV+ + + PT
Sbjct: 27 SKTLVVVDFTASWCGPCRFIAPFFADLAKKLPNVLFL-KVDTDELKSVASDWAIQAMPTF 85
Query: 406 KIFTGSK 426
K
Sbjct: 86 MFLKEGK 92
>At1g45145.1 68414.m05175 thioredoxin H-type 5 (TRX-H-5) (TOUL)
identical to SP|Q39241 Thioredoxin H-type 5 (TRX-H-5)
{Arabidopsis thaliana}; identical to cDNA (TOUL) mRNA
for thioredoxin GI:992965
Length = 118
Score = 41.9 bits (94), Expect = 3e-04
Identities = 19/64 (29%), Positives = 35/64 (54%)
Frame = +1
Query: 211 KLVTNSDEIWIIEFFAPWCGHCKSLVPEYKKAARALKGIVKVGALDADEHRSVSQKYGVT 390
K S ++ +I+F A WC C+ + P + + A+ +V +D DE ++V+Q++ V
Sbjct: 21 KDANESKKLIVIDFTASWCPPCRFIAPVFAEMAKKFTNVV-FFKIDVDELQAVAQEFKVE 79
Query: 391 GFPT 402
PT
Sbjct: 80 AMPT 83
>At4g26160.1 68417.m03765 thioredoxin family protein low similarity
to thioredoxin [Ictalurus punctatus] GI:9837585;
contains Pfam profile: PF00085 Thioredoxin
Length = 221
Score = 41.5 bits (93), Expect = 4e-04
Identities = 20/84 (23%), Positives = 45/84 (53%), Gaps = 2/84 (2%)
Frame = +1
Query: 178 DVIELTPSN--FDKLVTNSDEIWIIEFFAPWCGHCKSLVPEYKKAARALKGIVKVGALDA 351
++I++T + + L D + I++F+ WCG C+++ P+ K A+ I+ + ++
Sbjct: 94 NMIDITSAEQFLNALKDAGDRLVIVDFYGTWCGSCRAMFPKLCKTAKEHPNILFL-KVNF 152
Query: 352 DEHRSVSQKYGVTGFPTIKIFTGS 423
DE++S+ + V P + G+
Sbjct: 153 DENKSLCKSLNVKVLPYFHFYRGA 176
>At5g61440.1 68418.m07709 thioredoxin family protein low similarity
to thioredoxin [Callithrix jacchus] GI:13560979;
contains Pfam profile: PF00085 Thioredoxin
Length = 245
Score = 41.1 bits (92), Expect = 5e-04
Identities = 21/88 (23%), Positives = 48/88 (54%), Gaps = 2/88 (2%)
Frame = +1
Query: 169 SSSDVIELTPSNF--DKLVTNSDEIWIIEFFAPWCGHCKSLVPEYKKAARALKGIVKVGA 342
++ +++E+ +N D L+ D + +++F++P CG CKSL P+ + A ++ +
Sbjct: 83 TNHNMLEIQSANHLVDSLLNAGDRLVVLDFYSPGCGGCKSLHPKICQLAETNPNVMFL-K 141
Query: 343 LDADEHRSVSQKYGVTGFPTIKIFTGSK 426
++ +E R++ V P K + G++
Sbjct: 142 VNQEELRTMCHGLNVHVLPFFKFYRGAE 169
>At4g12170.1 68417.m01934 thioredoxin family protein similar to
SP|Q9SEU6 Thioredoxin M-type 4, chloroplast precursor
(TRX-M4) {Arabidopsis thaliana}; contains Pfam profile:
PF00085 Thioredoxin
Length = 128
Score = 40.3 bits (90), Expect = 0.001
Identities = 23/82 (28%), Positives = 39/82 (47%)
Frame = +1
Query: 181 VIELTPSNFDKLVTNSDEIWIIEFFAPWCGHCKSLVPEYKKAARALKGIVKVGALDADEH 360
V L+ S ++ LV S I+ F A C C SL+PE + + ++K +D DE
Sbjct: 26 VQSLSASEWNSLVIQSKVPVIVVFIAKDCAECGSLMPELEFLDSEYEYMLKFYTVDTDEE 85
Query: 361 RSVSQKYGVTGFPTIKIFTGSK 426
+++ Y + P +F G +
Sbjct: 86 LELAKDYRIEYHPITIVFKGGE 107
>At1g69880.1 68414.m08042 thioredoxin, putative similar to SP|Q38879
Thioredoxin H-type 2 (TRX-H-2) {Arabidopsis thaliana};
contains Pfam profile: PF00085 Thioredoxin
Length = 148
Score = 39.9 bits (89), Expect = 0.001
Identities = 19/61 (31%), Positives = 35/61 (57%)
Frame = +1
Query: 223 NSDEIWIIEFFAPWCGHCKSLVPEYKKAARALKGIVKVGALDADEHRSVSQKYGVTGFPT 402
+++++ +IEF A WCG CK+L P+ ++ A + V +D D SV ++ ++ P
Sbjct: 57 DTNKLLVIEFTAKWCGPCKTLEPKLEELAAKYTDVEFV-KIDVDVLMSVWMEFNLSTLPA 115
Query: 403 I 405
I
Sbjct: 116 I 116
>At2g41680.1 68415.m05149 thioredoxin reductase, putative /
NADPH-dependent thioredoxin reductase, putative The last
2 exons encode thioredoxin. There is an EST match to
exons 5-7, and the distance between exon 7 and exon 8 is
only 90bp. It is unlikely this is two separate genes,
but more likely a hybrid protein.
Length = 529
Score = 39.1 bits (87), Expect = 0.002
Identities = 17/68 (25%), Positives = 33/68 (48%)
Frame = +1
Query: 211 KLVTNSDEIWIIEFFAPWCGHCKSLVPEYKKAARALKGIVKVGALDADEHRSVSQKYGVT 390
KL S + ++ + +P CG C++L P K V +D +E + +++ G+
Sbjct: 436 KLYHESPRVILVLYTSPTCGPCRTLKPILNKVVDEYNHDVHFVEIDIEEDQEIAEAAGIM 495
Query: 391 GFPTIKIF 414
G P ++ F
Sbjct: 496 GTPCVQFF 503
>At5g42980.1 68418.m05242 thioredoxin H-type 3 (TRX-H-3) (GIF1)
identical to SP|Q42403 Thioredoxin H-type 3 (TRX-H-3)
{Arabidopsis thaliana}; identical to cDNA (GIF1) mRNA
for thioredoxin GI:992961
Length = 118
Score = 38.3 bits (85), Expect = 0.004
Identities = 18/64 (28%), Positives = 33/64 (51%)
Frame = +1
Query: 211 KLVTNSDEIWIIEFFAPWCGHCKSLVPEYKKAARALKGIVKVGALDADEHRSVSQKYGVT 390
K S ++ +I+F A WC C+ + P + A+ +V +D DE +V++++ V
Sbjct: 21 KAANESKKLIVIDFTATWCPPCRFIAPVFADLAKKHLDVV-FFKVDVDELNTVAEEFKVQ 79
Query: 391 GFPT 402
PT
Sbjct: 80 AMPT 83
>At1g52990.1 68414.m05997 thioredoxin family protein similar to
SP|P48384 Thioredoxin M-type, chloroplast precursor
(TRX-M) {Pisum sativum}; contains Pfam profile PF00085:
Thioredoxin
Length = 313
Score = 37.9 bits (84), Expect = 0.005
Identities = 15/62 (24%), Positives = 30/62 (48%)
Frame = +1
Query: 241 IIEFFAPWCGHCKSLVPEYKKAARALKGIVKVGALDADEHRSVSQKYGVTGFPTIKIFTG 420
++ F A WCG C+ ++P K K K ++ D ++++ ++ PT +F G
Sbjct: 231 MVMFTARWCGPCRDMIPILNKMDSEYKNEFKFYTVNFDTEIRFTERFDISYLPTTLVFKG 290
Query: 421 SK 426
+
Sbjct: 291 GE 292
>At4g37200.1 68417.m05266 thioredoxin family protein contains Pfam
profile: PF00085 Thioredoxin; identical to cDNA
thioredoxin-like protein (hcf164 gene) GI;12049652
Length = 261
Score = 37.1 bits (82), Expect = 0.009
Identities = 17/55 (30%), Positives = 28/55 (50%), Gaps = 2/55 (3%)
Frame = +1
Query: 241 IIEFFAPWCGHCKSLVPEYKKAARALKGIVKVGALDADEHRSVSQ--KYGVTGFP 399
++EF+A WC C+ L P+ K + K V L+ D + + ++GV G P
Sbjct: 142 VVEFYADWCEVCRELAPDVYKIEQQYKDKVNFVMLNVDNTKWEQELDEFGVEGIP 196
>At3g06730.1 68416.m00798 thioredoxin family protein contains Pfam
profile: PF00085 Thioredoxin
Length = 183
Score = 37.1 bits (82), Expect = 0.009
Identities = 19/76 (25%), Positives = 36/76 (47%), Gaps = 1/76 (1%)
Frame = +1
Query: 181 VIELTPSNFDKLVTNSDEI-WIIEFFAPWCGHCKSLVPEYKKAARALKGIVKVGALDADE 357
V +L+ +LV ++ I++F+A WCG C + E + A + + +D D+
Sbjct: 77 VKKLSAQELQELVKGDRKVPLIVDFYATWCGPCILMAQELEMLAVEYESNAIIVKVDTDD 136
Query: 358 HRSVSQKYGVTGFPTI 405
++ V G PT+
Sbjct: 137 EYEFARDMQVRGLPTL 152
>At3g17880.1 68416.m02278 tetratricoredoxin (TDX) identical to
tetratricoredoxin [Arabidopsis thaliana] GI:18041544;
similar to SP|Q42443 Thioredoxin H-type (TRX-H) (Phloem
sap 13 kDa protein-1) {Oryza sativa}; contains Pfam
profile: PF00085 Thioredoxin
Length = 380
Score = 36.3 bits (80), Expect = 0.015
Identities = 17/64 (26%), Positives = 30/64 (46%)
Frame = +1
Query: 211 KLVTNSDEIWIIEFFAPWCGHCKSLVPEYKKAARALKGIVKVGALDADEHRSVSQKYGVT 390
K + + I+ F A WCG C+ + P Y A +V + +D D+ V+ + ++
Sbjct: 286 KAAKKASRLLILYFTATWCGPCRYMSPLYSNLATQHSRVVFL-KVDIDKANDVAASWNIS 344
Query: 391 GFPT 402
PT
Sbjct: 345 SVPT 348
>At1g59730.1 68414.m06725 thioredoxin, putative similar to SP|Q38879
Thioredoxin H-type 2 (TRX-H-2) {Arabidopsis thaliana};
contains Pfam profile: PF00085 Thioredoxin
Length = 129
Score = 36.3 bits (80), Expect = 0.015
Identities = 20/67 (29%), Positives = 32/67 (47%)
Frame = +1
Query: 199 SNFDKLVTNSDEIWIIEFFAPWCGHCKSLVPEYKKAARALKGIVKVGALDADEHRSVSQK 378
S FD + S+++ +I+F A WCG CK++ P ++ A V +D D V+
Sbjct: 34 SLFDSM-KGSNKLLVIDFTAVWCGPCKAMEPRVREIASKYSEAV-FARVDVDRLMDVAGT 91
Query: 379 YGVTGFP 399
Y P
Sbjct: 92 YRAITLP 98
>At4g29670.2 68417.m04227 thioredoxin family protein contains Pfam
profile PF00085: Thioredoxin
Length = 236
Score = 35.9 bits (79), Expect = 0.020
Identities = 17/65 (26%), Positives = 33/65 (50%)
Frame = +1
Query: 229 DEIWIIEFFAPWCGHCKSLVPEYKKAARALKGIVKVGALDADEHRSVSQKYGVTGFPTIK 408
+ + I+EF+ WC C++L P+ K A IV + ++ DE++ + + V P
Sbjct: 123 ERLVIVEFYGTWCASCRALFPKLCKTAVEHPDIVFL-KVNFDENKPMCKSLNVRVLPFFH 181
Query: 409 IFTGS 423
+ G+
Sbjct: 182 FYRGA 186
>At4g29670.1 68417.m04226 thioredoxin family protein contains Pfam
profile PF00085: Thioredoxin
Length = 235
Score = 35.9 bits (79), Expect = 0.020
Identities = 17/65 (26%), Positives = 33/65 (50%)
Frame = +1
Query: 229 DEIWIIEFFAPWCGHCKSLVPEYKKAARALKGIVKVGALDADEHRSVSQKYGVTGFPTIK 408
+ + I+EF+ WC C++L P+ K A IV + ++ DE++ + + V P
Sbjct: 123 ERLVIVEFYGTWCASCRALFPKLCKTAVEHPDIVFL-KVNFDENKPMCKSLNVRVLPFFH 181
Query: 409 IFTGS 423
+ G+
Sbjct: 182 FYRGA 186
>At3g56420.1 68416.m06275 thioredoxin family protein similar to
thioredoxin [Nicotiana tabacum] GI:20047; contains Pfam
profile: PF00085 Thioredoxin
Length = 100
Score = 34.3 bits (75), Expect = 0.062
Identities = 19/69 (27%), Positives = 31/69 (44%), Gaps = 1/69 (1%)
Frame = +1
Query: 256 APWCGHCKSLVPEYKKAARALKGIVKVGALDADEHRSVSQKYGVTGFPTIKIF-TGSKHT 432
APWC CK + P ++ A ++ V +D +E S ++ V PT+ G +
Sbjct: 17 APWCVPCKKIEPVFRDLASRYPSMIFV-TVDVEELAEFSNEWNVEATPTVVFLKDGRQMD 75
Query: 433 PYQGQRTAE 459
G T+E
Sbjct: 76 KLVGAETSE 84
>At3g03860.1 68416.m00398 expressed protein
Length = 300
Score = 34.3 bits (75), Expect = 0.062
Identities = 18/91 (19%), Positives = 42/91 (46%), Gaps = 2/91 (2%)
Frame = +1
Query: 184 IELTPSNFDKLVTNS--DEIWIIEFFAPWCGHCKSLVPEYKKAARALKGIVKVGALDADE 357
IE+ + D+L+ + + + F+A WC +++ P++ + I + +
Sbjct: 57 IEVDGDSLDRLMASQHGNAYMSVLFYASWCPFSRAVRPKFDMLSSMFPQIQHLAVEHSQA 116
Query: 358 HRSVSQKYGVTGFPTIKIFTGSKHTPYQGQR 450
SV +YG+ P+I + + + Y G++
Sbjct: 117 LPSVFSRYGIHSLPSILMVNQTLNARYHGRK 147
>At3g08710.1 68416.m01012 thioredoxin family protein similar to
thioredoxin H-type GB:P29448 SP|P29448 [Arabidopsis
thaliana], Thioredoxin H-type 2 (TRX-H2) SP|Q07090
{Nicotiana tabacum}; contains Pfam profile: PF00085
Thioredoxin
Length = 140
Score = 32.3 bits (70), Expect = 0.25
Identities = 18/73 (24%), Positives = 34/73 (46%), Gaps = 3/73 (4%)
Frame = +1
Query: 193 TPSNFDKLVTNSD---EIWIIEFFAPWCGHCKSLVPEYKKAARALKGIVKVGALDADEHR 363
T ++D + +D +I + F A WCG CK + P + + + ++ + +D DE
Sbjct: 30 TKESWDDKLAEADRDGKIVVANFSATWCGPCKIVAPFFIELSEKHSSLMFL-LVDVDELS 88
Query: 364 SVSQKYGVTGFPT 402
S + + PT
Sbjct: 89 DFSSSWDIKATPT 101
>At5g06690.1 68418.m00756 thioredoxin family protein low similiarity
to SP|P34723 Thioredoxin {Penicillium chrysogenum};
contains Pfam profile: PF00085 Thioredoxin
Length = 210
Score = 31.9 bits (69), Expect = 0.33
Identities = 18/59 (30%), Positives = 29/59 (49%), Gaps = 1/59 (1%)
Frame = +1
Query: 241 IIEFFAPWCGHCKSLVPEYKKAARALKGIVKVGALDADEHRSVSQKYG-VTGFPTIKIF 414
IIE+ A WC C L P+ +K A K +D ++ K G ++ PTI+++
Sbjct: 122 IIEWMASWCRKCIYLKPKLEKLAAEYNNRAKFYYVDVNKVPQTLVKRGNISKMPTIQLW 180
>At3g53220.1 68416.m05864 thioredoxin family protein low similarity
to SP|P29451 Thioredoxin [Rhesus macaque] {Macaca
mulatta}; contains Pfam profile: PF00085 Thioredoxin
Length = 126
Score = 31.1 bits (67), Expect = 0.58
Identities = 13/39 (33%), Positives = 22/39 (56%)
Frame = +1
Query: 241 IIEFFAPWCGHCKSLVPEYKKAARALKGIVKVGALDADE 357
+I + A WCG C ++P ++K + + + V A D DE
Sbjct: 47 VINYGASWCGVCSQILPAFRKLSNSFSKLKFVYA-DIDE 84
>At4g30610.1 68417.m04342 serine carboxypeptidase S10 family protein
similar to Serine carboxypeptidase II chains A and B
(SP:P08819) (EC 3.4.16.6) [Triticum aestivum (Wheat)];
Length = 465
Score = 30.7 bits (66), Expect = 0.77
Identities = 15/38 (39%), Positives = 23/38 (60%)
Frame = +3
Query: 42 CCESRSQKFYNRLFINSVKFHNVTRIFYRYLALCNGVL 155
C ES ++K++NR + NVT I Y++ A C+ VL
Sbjct: 317 CTESYAEKYFNRPDVQRAMHANVTGIRYKWTA-CSDVL 353
>At2g35010.1 68415.m04295 thioredoxin family protein similar to
SP|Q42443 Thioredoxin H-type (TRX-H) {Oryza sativa};
contains Pfam profile: PF00085 Thioredoxin
Length = 194
Score = 30.7 bits (66), Expect = 0.77
Identities = 16/62 (25%), Positives = 27/62 (43%), Gaps = 2/62 (3%)
Frame = +1
Query: 241 IIEFFAPWCGHCKSLVPEYKKAARALKGIVKVGALDADEH--RSVSQKYGVTGFPTIKIF 414
+ F A WCG C+ + P + ++ + +D DE + K +T PT+ F
Sbjct: 110 VFYFTAAWCGPCRFISPVIVELSKQYPDVTTY-KVDIDEGGISNTISKLNITAVPTLHFF 168
Query: 415 TG 420
G
Sbjct: 169 KG 170
>At3g07990.1 68416.m00976 serine carboxypeptidase S10 family protein
similar to serine carboxypeptidase II (CP-MII)
GB:CAA70815 [Hordeum vulgare]
Length = 459
Score = 30.3 bits (65), Expect = 1.0
Identities = 14/39 (35%), Positives = 22/39 (56%)
Frame = +3
Query: 42 CCESRSQKFYNRLFINSVKFHNVTRIFYRYLALCNGVLG 158
C E S ++NRL + NVTR+ Y + A C+ ++G
Sbjct: 312 CTERYSNVYFNRLDVQKALHANVTRLSYPWKA-CSDIVG 349
>At4g38600.1 68417.m05464 HECT-domain-containing protein /
ubiquitin-transferase family protein similar to
SP|Q14669Thyroid receptor interacting protein 12 (TRIP12)
{Homo sapiens}; contains Pfam profile PF00632:
HECT-domain (ubiquitin-transferase)
Length = 1888
Score = 29.1 bits (62), Expect = 2.3
Identities = 27/88 (30%), Positives = 43/88 (48%), Gaps = 1/88 (1%)
Frame = +1
Query: 145 TGSLALYDSSSDVIELTPSNFDKLVTNSDEIWIIEFFAPWCGHCKSLVPEYKKAARALKG 324
+G ++D +S I TPS D L+ E+W +E A H K Y + A+
Sbjct: 1730 SGFNQVFDITSLQI-FTPSELDYLLCGRRELWEVETLAE---HIK-FDHGYNAKSPAIIN 1784
Query: 325 IVKV-GALDADEHRSVSQKYGVTGFPTI 405
++++ G L AD+ R+ Q VTG P +
Sbjct: 1785 LLEIMGELTADQQRAFCQ--FVTGAPRL 1810
>At1g31020.1 68414.m03798 thioredoxin o (TRXO2) similar to
thioredoxin 2 from Saccharomyces cerevisiae GI:173050,
3'-end of protein contains similarity to thioredoxins;
contains Pfam profile: PF00085 Thioredoxin; identical to
cDNA thioredoxin o (TRXO2) GI:15081458
Length = 159
Score = 29.1 bits (62), Expect = 2.3
Identities = 21/90 (23%), Positives = 40/90 (44%), Gaps = 5/90 (5%)
Frame = +1
Query: 166 DSSSDVIELTPSNFDKLVTNSDE---IWIIEFFAPWCGHCKSLVPEYKKAARALKGIVKV 336
D SS V+ + + F+ ++ + + + F A WCG C+ + P + + +
Sbjct: 47 DRSSFVVLKSEAEFNSALSKARDGSLPSVFYFTAAWCGPCRLISPVILELSNKYPDVTTY 106
Query: 337 GALDADEH--RSVSQKYGVTGFPTIKIFTG 420
+D DE + K V+ PT++ F G
Sbjct: 107 -KVDIDEGGLSNAIGKLNVSAVPTLQFFKG 135
>At5g08260.1 68418.m00971 serine carboxypeptidase S10 family protein
similar to Serine carboxypeptidase II chains A and B
(SP:P08819) (EC 3.4.16.6) [Triticum aestivum (Wheat)];
carboxypeptidase D - Triticum aestivum, PIR:A29639
Length = 480
Score = 28.3 bits (60), Expect = 4.1
Identities = 13/38 (34%), Positives = 22/38 (57%)
Frame = +3
Query: 42 CCESRSQKFYNRLFINSVKFHNVTRIFYRYLALCNGVL 155
C ES ++ ++NR + NVT + Y Y + C+GV+
Sbjct: 331 CTESYAENYFNRKDVQVALHANVTNLPYPY-SPCSGVI 367
>At2g24010.1 68415.m02868 serine carboxypeptidase S10 family protein
similar to Serine carboxypeptidase II chains A and B
(SP:P08819) (EC 3.4.16.6) [Triticum aestivum (Wheat)];
Length = 425
Score = 28.3 bits (60), Expect = 4.1
Identities = 14/38 (36%), Positives = 22/38 (57%)
Frame = +3
Query: 42 CCESRSQKFYNRLFINSVKFHNVTRIFYRYLALCNGVL 155
C ES ++ +YNR + N+T I Y++ LCN V+
Sbjct: 277 CTESYAEIYYNRPDVQRAMHANLTSIPYKW-TLCNMVV 313
>At4g38600.2 68417.m05463 HECT-domain-containing protein /
ubiquitin-transferase family protein similar to
SP|Q14669Thyroid receptor interacting protein 12 (TRIP12)
{Homo sapiens}; contains Pfam profile PF00632:
HECT-domain (ubiquitin-transferase)
Length = 1794
Score = 27.5 bits (58), Expect = 7.1
Identities = 28/87 (32%), Positives = 41/87 (47%)
Frame = +1
Query: 145 TGSLALYDSSSDVIELTPSNFDKLVTNSDEIWIIEFFAPWCGHCKSLVPEYKKAARALKG 324
+G ++D +S I TPS D L+ E+W +E A H K Y + A+
Sbjct: 1639 SGFNQVFDITSLQI-FTPSELDYLLCGRRELWEVETLAE---HIK-FDHGYNAKSPAIIN 1693
Query: 325 IVKVGALDADEHRSVSQKYGVTGFPTI 405
I +G L AD+ R+ Q VTG P +
Sbjct: 1694 I--MGELTADQQRAFCQ--FVTGAPRL 1716
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,955,542
Number of Sequences: 28952
Number of extensions: 239207
Number of successful extensions: 694
Number of sequences better than 10.0: 68
Number of HSP's better than 10.0 without gapping: 639
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 668
length of database: 12,070,560
effective HSP length: 77
effective length of database: 9,841,256
effective search space used: 1180950720
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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