Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmov10j16
(633 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
07_03_1359 - 25985936-25986083,25986424-25986782,25987026-259871... 34 0.11
05_04_0415 - 21080600-21080941,21081119-21081217,21085363-210854... 32 0.44
03_05_0653 + 26451795-26451972,26452724-26452800,26452898-264529... 31 0.58
01_01_0905 + 7116121-7116236,7116285-7116339,7116948-7117005,711... 31 0.58
12_01_0825 - 7611594-7611728,7612061-7612276,7612505-7612589,761... 31 1.0
11_01_0236 + 1811822-1812971,1814930-1814979,1815676-1816116,181... 30 1.3
03_04_0206 - 18493178-18495310 30 1.3
12_01_0234 + 1755704-1756120,1756203-1756313,1756923-1757063,175... 29 3.1
07_03_0538 + 19231318-19231382,19231652-19232390,19232468-192325... 29 3.1
03_02_0961 + 12759701-12760054,12760294-12760420,12760719-127611... 29 3.1
09_02_0042 - 3402424-3402534,3403242-3403345,3403448-3403562,340... 29 4.1
05_07_0112 - 27755604-27756449,27756624-27756887,27757428-277575... 29 4.1
05_07_0354 - 29507068-29507170,29507406-29507431,29508264-295083... 28 5.4
05_05_0288 - 23870228-23870965,23871515-23871584,23871662-238717... 27 9.4
02_04_0639 + 24662786-24663451 27 9.4
>07_03_1359 -
25985936-25986083,25986424-25986782,25987026-25987153,
25987609-25987727,25988253-25988320
Length = 273
Score = 33.9 bits (74), Expect = 0.11
Identities = 18/48 (37%), Positives = 27/48 (56%)
Frame = +2
Query: 467 NKQMEKHDEKDVHLEEEHECDKITRVEKKDEFNEFPDLLKPIEQNEKK 610
NK+ +K K +H E +K+ R ++ D FNE +LL+P QN K
Sbjct: 27 NKKCDKKAPKRIHKSER---EKLKRDKQNDLFNELGNLLEPDRQNNGK 71
>05_04_0415 -
21080600-21080941,21081119-21081217,21085363-21085455,
21085802-21085855,21085943-21086044,21086449-21086523,
21086662-21086784
Length = 295
Score = 31.9 bits (69), Expect = 0.44
Identities = 21/96 (21%), Positives = 43/96 (44%), Gaps = 3/96 (3%)
Frame = +2
Query: 287 YPTDMSDSSRPFYFNEGSILSPFPNDVKASFQNIMSQSK--PKNNAQYLSTGILNVAEIL 460
+P ++++ ++ YF + F M +++ PK+ G ++
Sbjct: 199 FPRELTEEAQSIYFTKNDYFPTFSAQTSGEIMTFMEEAQKIPKS----FGDGYIDYRS-- 252
Query: 461 KSNKQMEKHDEKDVHLEEEHECDKITR-VEKKDEFN 565
+ E+ + + + EEE ECDKI R V++K+ N
Sbjct: 253 DEEEMQEEEEGPEENEEEEDECDKILREVQEKETPN 288
>03_05_0653 +
26451795-26451972,26452724-26452800,26452898-26452981,
26453068-26453181,26453323-26453409,26454156-26454295,
26454388-26454475,26455330-26455403,26455936-26456069,
26456127-26456425,26456721-26456765
Length = 439
Score = 31.5 bits (68), Expect = 0.58
Identities = 14/44 (31%), Positives = 25/44 (56%)
Frame = +2
Query: 386 IMSQSKPKNNAQYLSTGILNVAEILKSNKQMEKHDEKDVHLEEE 517
I + P N + GI+ + ++++ Q E +DE DVH+EE+
Sbjct: 396 IHEEPLPTLNEDEEAVGIITMEDVIEELLQEEIYDETDVHVEEQ 439
>01_01_0905 +
7116121-7116236,7116285-7116339,7116948-7117005,
7117637-7117731,7117823-7117926,7118310-7118438,
7118845-7120633,7120849-7121054,7121865-7121949,
7122183-7122422
Length = 958
Score = 31.5 bits (68), Expect = 0.58
Identities = 26/97 (26%), Positives = 41/97 (42%), Gaps = 1/97 (1%)
Frame = +2
Query: 185 IATVTPARYKKSCKRRHGSHSTFANNMPDFPEVEYPTDMSDSSRPFYFNEGSILSPF-PN 361
IA P R K C+ R +H N + + E T + + Y N+ + L+ F P
Sbjct: 128 IAQALPGRIGKQCRERWYNHLNPGINKEAWTQEEEITLIH--AHRMYGNKWAELTKFLPG 185
Query: 362 DVKASFQNIMSQSKPKNNAQYLSTGILNVAEILKSNK 472
S +N + S K Y+S+G+L L N+
Sbjct: 186 RTDNSIKNHWNSSVKKKVNSYMSSGLLTQVSCLPLNE 222
>12_01_0825 -
7611594-7611728,7612061-7612276,7612505-7612589,
7613170-7613372,7613935-7615723,7616322-7616450,
7616825-7616928,7618725-7618779,7618860-7618975
Length = 943
Score = 30.7 bits (66), Expect = 1.0
Identities = 25/97 (25%), Positives = 41/97 (42%), Gaps = 1/97 (1%)
Frame = +2
Query: 185 IATVTPARYKKSCKRRHGSHSTFANNMPDFPEVEYPTDMSDSSRPFYFNEGSILSPF-PN 361
IA P R K C+ R +H N + + E T + + Y N+ + L+ F P
Sbjct: 77 IAQALPGRIGKQCRERWHNHLNPGINKEAWTQEEEITLI--HAHRMYGNKWAELTKFLPG 134
Query: 362 DVKASFQNIMSQSKPKNNAQYLSTGILNVAEILKSNK 472
+ +N + S K Y+S+G+L L N+
Sbjct: 135 RTDNAIKNHWNSSVKKKVDSYMSSGLLTQVSCLPLNE 171
>11_01_0236 +
1811822-1812971,1814930-1814979,1815676-1816116,
1816199-1816309,1816934-1817074,1817153-1817323,
1817421-1817625,1817714-1817886,1817997-1818079,
1818487-1818626,1818806-1818891,1818957-1819142,
1819172-1819365,1820387-1820736,1821153-1821235
Length = 1187
Score = 30.3 bits (65), Expect = 1.3
Identities = 18/64 (28%), Positives = 38/64 (59%), Gaps = 1/64 (1%)
Frame = +2
Query: 443 NVAEILKSNKQMEKHDEKDVHLEEEHECDKI-TRVEKKDEFNEFPDLLKPIEQNEKKVTF 619
N E KS + +E DE++ EEE E ++I +E+++E E D+++ +E+ +++
Sbjct: 420 NSVEPDKSEECLEFDDEEEEVEEEEIEYEEIEEEIEEEEEVEEDEDVVEEVEEVDEEEDE 479
Query: 620 KKQE 631
++ E
Sbjct: 480 EEDE 483
>03_04_0206 - 18493178-18495310
Length = 710
Score = 30.3 bits (65), Expect = 1.3
Identities = 15/73 (20%), Positives = 30/73 (41%)
Frame = +2
Query: 134 QKQSLSSQTGKNSASKNIATVTPARYKKSCKRRHGSHSTFANNMPDFPEVEYPTDMSDSS 313
++ + +TG +A + ++ K + G AN+ D + P D
Sbjct: 408 KQMKAAKKTGSKAAQDKVKGQALSKANKEAAKSKGKGKNVANDDDDMKPADLPQKWLDYK 467
Query: 314 RPFYFNEGSILSP 352
F+F E ++L+P
Sbjct: 468 VEFHFPEPTLLTP 480
>12_01_0234 +
1755704-1756120,1756203-1756313,1756923-1757063,
1757142-1757312,1757412-1757616,1757738-1757910,
1758021-1758103,1758250-1758389,1758569-1758645,
1758711-1758810,1759978-1760606
Length = 748
Score = 29.1 bits (62), Expect = 3.1
Identities = 16/64 (25%), Positives = 38/64 (59%), Gaps = 1/64 (1%)
Frame = +2
Query: 443 NVAEILKSNKQMEKHDEKDVHLEEEH-ECDKITRVEKKDEFNEFPDLLKPIEQNEKKVTF 619
N E KS + +E D+++ +EEE E ++I +++E E D+++ +E+ +++
Sbjct: 12 NSVEPEKSEECLEFDDDEEEEVEEEEIEYEEIEEEIEEEEVEEDEDVVEEVEEVDEEEDE 71
Query: 620 KKQE 631
+++E
Sbjct: 72 EEEE 75
>07_03_0538 +
19231318-19231382,19231652-19232390,19232468-19232516,
19232600-19232664,19232774-19232828,19234107-19234225,
19234346-19234412,19235316-19235437,19235521-19235790
Length = 516
Score = 29.1 bits (62), Expect = 3.1
Identities = 22/96 (22%), Positives = 42/96 (43%), Gaps = 1/96 (1%)
Frame = +2
Query: 263 MPD-FPEVEYPTDMSDSSRPFYFNEGSILSPFPNDVKASFQNIMSQSKPKNNAQYLSTGI 439
+PD F + P D+ R + S F DV+ +F N M + P N+ ++
Sbjct: 144 IPDYFDVIRNPMDLGTVKRKLTSKQYSNPYEFAADVRLTFSNAMKYNPPGNDVHGIAD-- 201
Query: 440 LNVAEILKSNKQMEKHDEKDVHLEEEHECDKITRVE 547
+ +I S ++ + KD +L +E K+ + +
Sbjct: 202 -QLNKIFDSEWKLLERKWKDRNLVQEQPSLKVLKAQ 236
>03_02_0961 +
12759701-12760054,12760294-12760420,12760719-12761167,
12761369-12761590,12761672-12761980,12762092-12762430,
12762504-12762584,12762661-12762756,12762846-12763220,
12763400-12763531,12763962-12764132
Length = 884
Score = 29.1 bits (62), Expect = 3.1
Identities = 23/90 (25%), Positives = 40/90 (44%), Gaps = 3/90 (3%)
Frame = +2
Query: 353 FPNDVKASFQN---IMSQSKPKNNAQYLSTGILNVAEILKSNKQMEKHDEKDVHLEEEHE 523
F ND+ I S+ KP+N + +AEI++S + ME H V + E ++
Sbjct: 257 FENDLNLGVNTVGAIASEFKPRNEFEK------QMAEIMRSTEMMEAHKNDGVKILELNK 310
Query: 524 CDKITRVEKKDEFNEFPDLLKPIEQNEKKV 613
D E+++ + LL E K++
Sbjct: 311 IDMEDVRERQNRLAKMRSLLFRHEMKAKRI 340
>09_02_0042 -
3402424-3402534,3403242-3403345,3403448-3403562,
3404344-3404391,3404519-3404608,3404819-3404893,
3405001-3405153,3405695-3405779,3408051-3408121,
3408243-3408293,3409037-3409453,3409529-3409660,
3409779-3409892,3411113-3411179,3411264-3411397,
3411486-3411701,3412627-3413418
Length = 924
Score = 28.7 bits (61), Expect = 4.1
Identities = 16/52 (30%), Positives = 29/52 (55%), Gaps = 3/52 (5%)
Frame = +2
Query: 461 KSNKQMEKHDE---KDVHLEEEHECDKITRVEKKDEFNEFPDLLKPIEQNEK 607
KSNK+M+ +E D+ E+E K+T + KK + + +++K + N K
Sbjct: 277 KSNKEMDNEEEGGDSDIAKEQERLRKKVTDLMKKQKIRQVRNIVKK-QDNSK 327
>05_07_0112 -
27755604-27756449,27756624-27756887,27757428-27757532,
27757626-27758249,27759048-27759596,27759665-27760372,
27760449-27760658,27761266-27761421,27761524-27761664,
27762015-27762101,27762209-27762309,27763071-27763293,
27763384-27763548,27763621-27763713,27763801-27764292,
27764729-27764805,27765184-27765681,27765818-27766046
Length = 1855
Score = 28.7 bits (61), Expect = 4.1
Identities = 29/128 (22%), Positives = 50/128 (39%)
Frame = +2
Query: 230 RHGSHSTFANNMPDFPEVEYPTDMSDSSRPFYFNEGSILSPFPNDVKASFQNIMSQSKPK 409
R + S F + + P + +S SS + S D + NI S S P
Sbjct: 336 RMSTGSRFLHGVEKAPGYTFHGQISGSSHLSLHGRPPVFSSGSTDYEMDPSNINSSSVP- 394
Query: 410 NNAQYLSTGILNVAEILKSNKQMEKHDEKDVHLEEEHECDKITRVEKKDEFNEFPDLLKP 589
N +QY + + + +M HD D R+E+K + +E + K
Sbjct: 395 NESQYGIPQVAGFENSVAPSDRMVYHD------------DDAFRMERKRKHSEEVKIAKE 442
Query: 590 IEQNEKKV 613
+E +EK++
Sbjct: 443 VEAHEKRI 450
>05_07_0354 -
29507068-29507170,29507406-29507431,29508264-29508301,
29508722-29508825,29509005-29509024,29509251-29509299,
29510319-29510406,29510463-29510562,29510660-29510737,
29512688-29512804,29513718-29513821,29514497-29514569,
29514904-29514981,29515091-29515215,29515278-29515341,
29515439-29515597,29515950-29516048,29516496-29516624,
29517010-29517075,29517160-29517304,29517379-29517500,
29517683-29517838,29517918-29518029,29518891-29519036,
29519148-29519252,29519391-29519540,29519703-29519776,
29519902-29520055,29520142-29520408
Length = 1016
Score = 28.3 bits (60), Expect = 5.4
Identities = 15/58 (25%), Positives = 29/58 (50%)
Frame = +2
Query: 437 ILNVAEILKSNKQMEKHDEKDVHLEEEHECDKITRVEKKDEFNEFPDLLKPIEQNEKK 610
+L AE++K K+D K +E E +K + + ++ + D P+E+ +KK
Sbjct: 247 LLKKAELMKKKLPWLKYDMKKKEYKEAQEKEKTEKKKMEEVAKIWEDSKGPVEELKKK 304
>05_05_0288 -
23870228-23870965,23871515-23871584,23871662-23871749,
23871825-23871882,23871963-23872039,23872111-23872258
Length = 392
Score = 27.5 bits (58), Expect = 9.4
Identities = 17/43 (39%), Positives = 21/43 (48%), Gaps = 1/43 (2%)
Frame = +2
Query: 107 TEVVYTY-KPQKQSLSSQTGKNSASKNIATVTPARYKKSCKRR 232
TEV++ Y PQK S T S SK I + SCKR+
Sbjct: 303 TEVLHEYITPQKNGGGSTTSSTSGSKEINVEKLYLDEPSCKRQ 345
>02_04_0639 + 24662786-24663451
Length = 221
Score = 27.5 bits (58), Expect = 9.4
Identities = 20/67 (29%), Positives = 31/67 (46%), Gaps = 15/67 (22%)
Frame = +2
Query: 137 KQSLSSQTGKNSASKNIATVTPARYKKS-------CKRRHGSH--------STFANNMPD 271
++ L+ + + A+ ++ TPARY +S CK R GS +T PD
Sbjct: 141 RERLAEELRRGDAAVDVTLTTPARYCRSCMQTVIECKHRVGSGEFSPRCGVTTDFPTFPD 200
Query: 272 FPEVEYP 292
P+V YP
Sbjct: 201 SPDVPYP 207
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,863,819
Number of Sequences: 37544
Number of extensions: 295443
Number of successful extensions: 814
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 789
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 813
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1549385732
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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