Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmov10j16
(633 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g29000.1 68414.m03546 heavy-metal-associated domain-containin... 34 0.090
At1g08060.2 68414.m00881 MOM1 identical to MOM1 (mutation in a '... 30 1.1
At1g08060.1 68414.m00880 MOM1 identical to MOM1 (mutation in a '... 30 1.1
At5g14270.1 68418.m01669 DNA-binding bromodomain-containing prot... 30 1.5
At3g57150.1 68416.m06363 dyskerin, putative / nucleolar protein ... 30 1.5
At1g34220.2 68414.m04247 expressed protein contains Pfam profil... 30 1.5
At1g34220.1 68414.m04246 expressed protein contains Pfam profil... 30 1.5
At4g04980.1 68417.m00724 hydroxyproline-rich glycoprotein family... 29 1.9
At5g63330.1 68418.m07948 DNA-binding bromodomain-containing prot... 29 2.6
At3g01770.1 68416.m00116 DNA-binding bromodomain-containing prot... 29 2.6
At4g33700.1 68417.m04786 CBS domain-containing protein contains ... 29 3.4
At1g03300.1 68414.m00308 agenet domain-containing protein contai... 29 3.4
At5g50350.1 68418.m06236 expressed protein 28 4.5
At3g28510.1 68416.m03561 AAA-type ATPase family protein contains... 28 4.5
At3g28415.1 68416.m03551 P-glycoprotein, putative contains ATP-b... 28 4.5
At1g68940.1 68414.m07891 armadillo/beta-catenin repeat protein-r... 28 4.5
At1g66880.1 68414.m07601 serine/threonine protein kinase family ... 28 4.5
At1g27480.1 68414.m03350 lecithin:cholesterol acyltransferase fa... 28 4.5
At3g05060.1 68416.m00549 SAR DNA-binding protein, putative stron... 28 5.9
At1g01670.1 68414.m00085 U-box domain-containing protein 28 5.9
At4g22320.1 68417.m03227 expressed protein 27 7.8
At3g62900.1 68416.m07066 expressed protein ; expression supporte... 27 7.8
At3g23080.1 68416.m02909 expressed protein weak similarity to SP... 27 7.8
At1g14110.1 68414.m01668 xyloglucan fucosyltransferase family pr... 27 7.8
>At1g29000.1 68414.m03546 heavy-metal-associated domain-containing
protein similar to farnesylated protein ATFP3
[GI:4097547]; contains Pfam profile PF00403:
Heavy-metal-associated domain
Length = 287
Score = 33.9 bits (74), Expect = 0.090
Identities = 26/90 (28%), Positives = 40/90 (44%)
Frame = +2
Query: 362 DVKASFQNIMSQSKPKNNAQYLSTGILNVAEILKSNKQMEKHDEKDVHLEEEHECDKITR 541
D KA + + Y+ + AEI+ S + EK E++ ++E E K
Sbjct: 146 DTKAQTLTVQGTIESAKLLAYIKKKVHKHAEIISSKTEEEKKKEEEDKKKKEEEDKKKKE 205
Query: 542 VEKKDEFNEFPDLLKPIEQNEKKVTFKKQE 631
EKK E + K E+N+KK KK+E
Sbjct: 206 DEKKKEEEK-----KKEEENKKKEGEKKKE 230
>At1g08060.2 68414.m00881 MOM1 identical to MOM1 (mutation in a
'Morpheus molecule') [Arabidopsis thaliana]
gi|8132770|gb|AAF73381.1|
Length = 2001
Score = 30.3 bits (65), Expect = 1.1
Identities = 32/148 (21%), Positives = 61/148 (41%), Gaps = 2/148 (1%)
Frame = +2
Query: 158 TGKNSASKNIATVTPARYKKSCKRRHGSHSTFANNMPDFPEVEYPTD-MSDSSRPFYFNE 334
+G ++ S+N V + + + + A+ + PE E MS S
Sbjct: 1258 SGSSNISQNAPDVQICN-NANVEATYADTNCMASKVNQVPEAENTLGTMSGGSTQQVHEM 1316
Query: 335 GSILSPFPNDVKASFQNIMSQSKPKNNAQYLSTGILNVAEILKSNKQMEKHDEKDVHLEE 514
+ + DV A + +++S+ +A + V EIL E+ +VHL E
Sbjct: 1317 VDVRNDETMDVSALSREQLTKSQSNEHAS------ITVPEILIPADCQEEFAALNVHLSE 1370
Query: 515 EHECDKIT-RVEKKDEFNEFPDLLKPIE 595
+ CD+IT +D + P++ + +E
Sbjct: 1371 DQNCDRITSAASDEDVSSRVPEVSQSLE 1398
>At1g08060.1 68414.m00880 MOM1 identical to MOM1 (mutation in a
'Morpheus molecule') [Arabidopsis thaliana]
gi|8132770|gb|AAF73381.1|
Length = 2001
Score = 30.3 bits (65), Expect = 1.1
Identities = 32/148 (21%), Positives = 61/148 (41%), Gaps = 2/148 (1%)
Frame = +2
Query: 158 TGKNSASKNIATVTPARYKKSCKRRHGSHSTFANNMPDFPEVEYPTD-MSDSSRPFYFNE 334
+G ++ S+N V + + + + A+ + PE E MS S
Sbjct: 1258 SGSSNISQNAPDVQICN-NANVEATYADTNCMASKVNQVPEAENTLGTMSGGSTQQVHEM 1316
Query: 335 GSILSPFPNDVKASFQNIMSQSKPKNNAQYLSTGILNVAEILKSNKQMEKHDEKDVHLEE 514
+ + DV A + +++S+ +A + V EIL E+ +VHL E
Sbjct: 1317 VDVRNDETMDVSALSREQLTKSQSNEHAS------ITVPEILIPADCQEEFAALNVHLSE 1370
Query: 515 EHECDKIT-RVEKKDEFNEFPDLLKPIE 595
+ CD+IT +D + P++ + +E
Sbjct: 1371 DQNCDRITSAASDEDVSSRVPEVSQSLE 1398
>At5g14270.1 68418.m01669 DNA-binding bromodomain-containing protein
contains bromodomain, INTERPRO:IPR001487
Length = 688
Score = 29.9 bits (64), Expect = 1.5
Identities = 16/67 (23%), Positives = 29/67 (43%)
Frame = +2
Query: 257 NNMPDFPEVEYPTDMSDSSRPFYFNEGSILSPFPNDVKASFQNIMSQSKPKNNAQYLSTG 436
N + F +E+P D+ S S F DV+ +F N M+ + P N+ ++
Sbjct: 167 NILDYFNVIEHPMDLGTVKNKLTSGTYSCPSEFAADVRLTFSNAMTYNPPGNDVYVMADT 226
Query: 437 ILNVAEI 457
+ E+
Sbjct: 227 LRKFFEV 233
>At3g57150.1 68416.m06363 dyskerin, putative / nucleolar protein
NAP57, putative similar to SP|P40615 Dyskerin (Nucleolar
protein NAP57) {Rattus norvegicus}; contains Pfam
profiles PF01509: TruB family pseudouridylate synthase
(N terminal domain), PF01472: PUA domain; supporting
cDNA gi|8901185|gb|AF234984.2|AF234984
Length = 565
Score = 29.9 bits (64), Expect = 1.5
Identities = 20/61 (32%), Positives = 33/61 (54%), Gaps = 1/61 (1%)
Frame = +2
Query: 452 EILKSNKQMEKHDEKDVHLEEEHECDKITRVEKKDEFNE-FPDLLKPIEQNEKKVTFKKQ 628
E +KS+K+ +K D K+ EEE +K + +KKD+ E ++ P + +KK K
Sbjct: 471 EKVKSSKKKKKKD-KEEEKEEEAGSEKKEKKKKKDKKEEVIEEVASPKSEKKKKKKSKDT 529
Query: 629 E 631
E
Sbjct: 530 E 530
>At1g34220.2 68414.m04247 expressed protein contains Pfam profile:
PF03398 eukaryotic protein of unknown function, DUF292
Length = 619
Score = 29.9 bits (64), Expect = 1.5
Identities = 19/81 (23%), Positives = 36/81 (44%), Gaps = 1/81 (1%)
Frame = +2
Query: 164 KNSASKNIATVTPARYKKSCKRRHGSHSTFANNMPDFPEVEYP-TDMSDSSRPFYFNEGS 340
+NS+ N +TP R+ K + ++ ++ D PE++ P T D P ++
Sbjct: 519 QNSSGSNYDDLTPHRFPSMEKPQFDHQNSSVSSYGDLPELQRPETSPLDRLSPDQDHQQM 578
Query: 341 ILSPFPNDVKASFQNIMSQSK 403
L +D S+ N+ + K
Sbjct: 579 RLPSMEDDPYYSYPNLFTSQK 599
>At1g34220.1 68414.m04246 expressed protein contains Pfam profile:
PF03398 eukaryotic protein of unknown function, DUF292
Length = 649
Score = 29.9 bits (64), Expect = 1.5
Identities = 19/81 (23%), Positives = 36/81 (44%), Gaps = 1/81 (1%)
Frame = +2
Query: 164 KNSASKNIATVTPARYKKSCKRRHGSHSTFANNMPDFPEVEYP-TDMSDSSRPFYFNEGS 340
+NS+ N +TP R+ K + ++ ++ D PE++ P T D P ++
Sbjct: 549 QNSSGSNYDDLTPHRFPSMEKPQFDHQNSSVSSYGDLPELQRPETSPLDRLSPDQDHQQM 608
Query: 341 ILSPFPNDVKASFQNIMSQSK 403
L +D S+ N+ + K
Sbjct: 609 RLPSMEDDPYYSYPNLFTSQK 629
>At4g04980.1 68417.m00724 hydroxyproline-rich glycoprotein family
protein Common family members: At4g18570, At3g25690,
At5g61090 [Arabidopsis thaliana]
Length = 681
Score = 29.5 bits (63), Expect = 1.9
Identities = 27/94 (28%), Positives = 42/94 (44%), Gaps = 4/94 (4%)
Frame = +2
Query: 302 SDSSRPFYFNEGSILSPFPNDVKASFQNIMSQSKPKNNAQYLS----TGILNVAEILKSN 469
S+S+ FY + + S P + S N S S AQ L + A + S
Sbjct: 78 SESNNSFYPSPLTPRSVLPGTMMMS-SNSTSPSLWNLRAQALDRLSPVDLKRFAMQILSQ 136
Query: 470 KQMEKHDEKDVHLEEEHECDKITRVEKKDEFNEF 571
+ E E + +EEE+E +I EK++E N+F
Sbjct: 137 RDSESVSETKIGIEEENEESEILAEEKEEEDNDF 170
>At5g63330.1 68418.m07948 DNA-binding bromodomain-containing protein
contains bromodomain, INTERPRO:IPR001487
Length = 477
Score = 29.1 bits (62), Expect = 2.6
Identities = 17/61 (27%), Positives = 29/61 (47%), Gaps = 1/61 (1%)
Frame = +2
Query: 260 NMPD-FPEVEYPTDMSDSSRPFYFNEGSILSPFPNDVKASFQNIMSQSKPKNNAQYLSTG 436
N+PD F +++P D+ E S F DV+ +F N ++ + P N ++ G
Sbjct: 191 NIPDYFNVIKHPMDLGTIRSRLCKGEYSSPLDFAADVRLTFSNSIAYNPPGNQFHTMAQG 250
Query: 437 I 439
I
Sbjct: 251 I 251
>At3g01770.1 68416.m00116 DNA-binding bromodomain-containing protein
contains bromodomain, INTERPRO:IPR001487
Length = 620
Score = 29.1 bits (62), Expect = 2.6
Identities = 16/53 (30%), Positives = 26/53 (49%), Gaps = 1/53 (1%)
Frame = +2
Query: 260 NMPD-FPEVEYPTDMSDSSRPFYFNEGSILSPFPNDVKASFQNIMSQSKPKNN 415
N+PD F +++P D+ S S F DV+ +F+N M+ + NN
Sbjct: 159 NIPDYFTIIKHPMDLGTVKSKLTSGTYSSPSEFSADVRLTFRNAMTYNPSDNN 211
>At4g33700.1 68417.m04786 CBS domain-containing protein contains
Pfam profiles PF00571: CBS domain, PF01595: Domain of
unknown function
Length = 424
Score = 28.7 bits (61), Expect = 3.4
Identities = 17/68 (25%), Positives = 29/68 (42%)
Frame = +2
Query: 311 SRPFYFNEGSILSPFPNDVKASFQNIMSQSKPKNNAQYLSTGILNVAEILKSNKQMEKHD 490
+R F GS + D A + PK + + GI+ + ++++ Q E D
Sbjct: 356 NRASSFKGGSKSKKWSKDNDADILQLNGNPLPKLAEEEEAVGIITMEDVIEELLQEEIFD 415
Query: 491 EKDVHLEE 514
E D H E+
Sbjct: 416 ETDHHFED 423
>At1g03300.1 68414.m00308 agenet domain-containing protein contains
Pfam PF05641: Agenet domain
Length = 670
Score = 28.7 bits (61), Expect = 3.4
Identities = 15/62 (24%), Positives = 36/62 (58%)
Frame = +2
Query: 446 VAEILKSNKQMEKHDEKDVHLEEEHECDKITRVEKKDEFNEFPDLLKPIEQNEKKVTFKK 625
++++L + K E+ LE++ EC++I R ++EF +F ++ IE+ + + K+
Sbjct: 575 ISKVLPLQDKRAKKAEERKCLEKKIECEEIERKRFEEEFADFERII--IEKKRQALVAKE 632
Query: 626 QE 631
++
Sbjct: 633 KK 634
>At5g50350.1 68418.m06236 expressed protein
Length = 584
Score = 28.3 bits (60), Expect = 4.5
Identities = 12/25 (48%), Positives = 18/25 (72%)
Frame = +2
Query: 212 KKSCKRRHGSHSTFANNMPDFPEVE 286
++S RRH S S F++ MPD P++E
Sbjct: 31 RRSASRRHRSLSRFSHRMPD-PDIE 54
>At3g28510.1 68416.m03561 AAA-type ATPase family protein contains
Pfam profile: PF00004 ATPase family
Length = 530
Score = 28.3 bits (60), Expect = 4.5
Identities = 19/55 (34%), Positives = 27/55 (49%), Gaps = 1/55 (1%)
Frame = +2
Query: 470 KQMEKHDEKDVHLEEEHECDKITRVEKK-DEFNEFPDLLKPIEQNEKKVTFKKQE 631
K +E+ EK L EE E K + KK + E + K E++EKK K +E
Sbjct: 455 KTLEEEKEKARKLAEEEEKKKAEKEAKKMKKAEEAEEKKKKTEEDEKKEKVKAKE 509
>At3g28415.1 68416.m03551 P-glycoprotein, putative contains
ATP-binding cassette; related to multi drug resistance
proteins
Length = 1221
Score = 28.3 bits (60), Expect = 4.5
Identities = 16/48 (33%), Positives = 25/48 (52%), Gaps = 4/48 (8%)
Frame = +2
Query: 278 EVEYPTDMSDSSRPFYFNEGSI----LSPFPNDVKASFQNIMSQSKPK 409
+V+Y + +S SR F SI P D K SF+ +M+ +KP+
Sbjct: 602 DVKYSSRLSIQSRSSLFATSSIDTNLAGSIPKDKKPSFKRLMAMNKPE 649
>At1g68940.1 68414.m07891 armadillo/beta-catenin repeat
protein-related / U-box domain-containing protein ;
contains Pfam profile PF04564: U-box domain
Length = 1033
Score = 28.3 bits (60), Expect = 4.5
Identities = 18/72 (25%), Positives = 35/72 (48%), Gaps = 1/72 (1%)
Frame = +2
Query: 218 SCKRRHGSHSTFANNMPDFPEV-EYPTDMSDSSRPFYFNEGSILSPFPNDVKASFQNIMS 394
S +R+HG+HS + + + P++ T++S + ++ S D+ + N S
Sbjct: 163 SRQRKHGNHSESQSLVTEIPDIPSQSTNVSSQRKHGNLSKSQSQSTEIPDIPSQSSNASS 222
Query: 395 QSKPKNNAQYLS 430
Q K N ++ LS
Sbjct: 223 QRKYGNLSESLS 234
>At1g66880.1 68414.m07601 serine/threonine protein kinase family
protein contains protein kinase domain, Pfam:PF00069;
contains serine/threonine protein kinase domain,
INTERPRO:IPR002290
Length = 1296
Score = 28.3 bits (60), Expect = 4.5
Identities = 23/79 (29%), Positives = 32/79 (40%), Gaps = 2/79 (2%)
Frame = +2
Query: 296 DMSDSSRPFYFNEGSILSPFP--NDVKASFQNIMSQSKPKNNAQYLSTGILNVAEILKSN 469
D SD R +Y P ND+ F SQS +N + S LN+ + SN
Sbjct: 750 DDSDDDRSYYVTRNLSFPPLSEINDLLYDF----SQSCDRNVSIPASGSTLNILQSTPSN 805
Query: 470 KQMEKHDEKDVHLEEEHEC 526
++K E LE +C
Sbjct: 806 DNLKKALEYGFELELNQDC 824
>At1g27480.1 68414.m03350 lecithin:cholesterol acyltransferase
family protein / LACT family protein similar to
LCAT-like lysophospholipase (LLPL) [Homo sapiens]
GI:4589720; contains Pfam profile PF02450:
Lecithin:cholesterol acyltransferase
(phosphatidylcholine-sterol acyltransferase)
Length = 432
Score = 28.3 bits (60), Expect = 4.5
Identities = 13/28 (46%), Positives = 14/28 (50%)
Frame = -2
Query: 551 FSQHVLSYHIHVLPLNEHLFHRAFPFVC 468
FSQ V+ Y VLPL E L P C
Sbjct: 316 FSQGVVPYKTRVLPLTEELMTPGVPVTC 343
>At3g05060.1 68416.m00549 SAR DNA-binding protein, putative strong
similarity to SAR DNA-binding protein-1 [Pisum sativum]
GI:3132696; contains Pfam profile PF01798: Putative
snoRNA binding domain
Length = 533
Score = 27.9 bits (59), Expect = 5.9
Identities = 16/57 (28%), Positives = 29/57 (50%), Gaps = 1/57 (1%)
Frame = +2
Query: 392 SQSKPKNNAQYLSTGILNVA-EILKSNKQMEKHDEKDVHLEEEHECDKITRVEKKDE 559
S+ K K A+ + ++ VA E K NK+ KH+E++ + DK + +K +
Sbjct: 477 SEKKKKKKAEAETEAVVEVAKEEKKKNKKKRKHEEEETTETPAKKKDKKEKKKKSKD 533
>At1g01670.1 68414.m00085 U-box domain-containing protein
Length = 365
Score = 27.9 bits (59), Expect = 5.9
Identities = 12/56 (21%), Positives = 29/56 (51%), Gaps = 1/56 (1%)
Frame = +2
Query: 449 AEILKSNKQMEKHDEKDVHLEEEHECD-KITRVEKKDEFNEFPDLLKPIEQNEKKV 613
AE+ ++ ++E + L+E+H D ++ E+ + +LL+ +E+ E +
Sbjct: 229 AELNRAKAEIEDMKRVQIELKEQHYADCRLLEKERDEAIKTTEELLRALEKGESSI 284
>At4g22320.1 68417.m03227 expressed protein
Length = 238
Score = 27.5 bits (58), Expect = 7.8
Identities = 16/59 (27%), Positives = 33/59 (55%)
Frame = +2
Query: 455 ILKSNKQMEKHDEKDVHLEEEHECDKITRVEKKDEFNEFPDLLKPIEQNEKKVTFKKQE 631
+L+ K+ E+D +EE+ + D+ +VE++D+ +E + E +EKK + +E
Sbjct: 121 VLEEQKKEITEIEEDDKIEEDDKIDEDNKVEQEDKVDEDKTV---EESSEKKAEVEVEE 176
>At3g62900.1 68416.m07066 expressed protein ; expression supported by
MPSS
Length = 1401
Score = 27.5 bits (58), Expect = 7.8
Identities = 18/79 (22%), Positives = 32/79 (40%), Gaps = 2/79 (2%)
Frame = +2
Query: 389 MSQSKPKNNAQYLSTGILNVAEILKSNKQMEKHDEKDVHLEEEHECDK--ITRVEKKDEF 562
+S PK TG N +K K E H + E HE K + + EK+ +
Sbjct: 790 VSSKMPKEEGGASDTGNSNSTGGIKKRKLRESHGSRIYSENENHERKKARVRKEEKEPSY 849
Query: 563 NEFPDLLKPIEQNEKKVTF 619
++ L+ ++ K+ +
Sbjct: 850 SQGNGKLEKKNRSHSKIEY 868
>At3g23080.1 68416.m02909 expressed protein weak similarity to
SP|Q9UKL6 Phosphatidylcholine transfer protein (PC-TP)
{Homo sapiens}
Length = 419
Score = 27.5 bits (58), Expect = 7.8
Identities = 13/46 (28%), Positives = 23/46 (50%)
Frame = +2
Query: 377 FQNIMSQSKPKNNAQYLSTGILNVAEILKSNKQMEKHDEKDVHLEE 514
++ + + KP+ Y S+ I+N E K + QM + VH E+
Sbjct: 254 YKALSKRDKPRRVELYFSSWIINAVESRKGDGQMTACEVSLVHYED 299
>At1g14110.1 68414.m01668 xyloglucan fucosyltransferase family
protein contains Pfam profile: PF03254 xyloglucan
fucosyltransferase
Length = 907
Score = 27.5 bits (58), Expect = 7.8
Identities = 16/48 (33%), Positives = 27/48 (56%)
Frame = -2
Query: 632 FLVF*KSLFFHSALWVLKDQEIH*TRLFSQHVLSYHIHVLPLNEHLFH 489
+LVF +L+F +LW++ + ++LF Q +H H L +LFH
Sbjct: 252 WLVFNSNLYFIPSLWLIPSFQSELSKLFPQKETVFH-H---LARYLFH 295
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,794,145
Number of Sequences: 28952
Number of extensions: 263915
Number of successful extensions: 1000
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 949
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 993
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1295224128
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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