Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmov10j15
         (448 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF134820-1|AAD40235.1|  166|Apis mellifera putative Ets-family p...    27   0.071
AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein pr...    24   0.87 
DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450 monoo...    22   3.5  
AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat...    22   3.5  
D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.    21   4.6  
AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase pro...    21   4.6  

>AF134820-1|AAD40235.1|  166|Apis mellifera putative Ets-family
           protein protein.
          Length = 166

 Score = 27.5 bits (58), Expect = 0.071
 Identities = 18/56 (32%), Positives = 25/56 (44%)
 Frame = +2

Query: 188 TKQYDKSENDLKALQSVGQIVGEVLKQLTEEKFIVKATNGPRYVVGCRRQLDKNKL 355
           T + DKSE  L   Q+ G I     + L+    I K   GP +  G R ++  N L
Sbjct: 100 TSRLDKSEISLATKQACGFIDNIDKRNLSVTSMIQKRALGPSFSTGERCRISSNFL 155


>AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein
           protein.
          Length = 1308

 Score = 23.8 bits (49), Expect = 0.87
 Identities = 9/22 (40%), Positives = 16/22 (72%)
 Frame = +2

Query: 89  LREKAFQDYRKKLMEHKEVESR 154
           +RE+  + YR+ L+EHK+  +R
Sbjct: 139 IREQTEEMYREMLLEHKKRRAR 160


>DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 548

 Score = 21.8 bits (44), Expect = 3.5
 Identities = 12/37 (32%), Positives = 18/37 (48%)
 Frame = +2

Query: 212 NDLKALQSVGQIVGEVLKQLTEEKFIVKATNGPRYVV 322
           N L    S   +  +VLK+    K +VK   GP+ V+
Sbjct: 55  NALDLFGSPDAMFSQVLKKAENFKDVVKIWVGPKLVI 91


>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
            receptor protein.
          Length = 1040

 Score = 21.8 bits (44), Expect = 3.5
 Identities = 11/38 (28%), Positives = 19/38 (50%)
 Frame = +3

Query: 99   RPSRITERSSWSIRKSSHDSKKVVTN*KI*PNNMTRVK 212
            +P  +  RS+ +   +  D+  VVT  K   +N+T  K
Sbjct: 983  KPPSVVSRSTQTSANNDKDTNAVVTQSKEARDNITATK 1020


>D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.
          Length = 567

 Score = 21.4 bits (43), Expect = 4.6
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = -1

Query: 322 NNVARAISSFYNKF 281
           NNV + ++ FYN F
Sbjct: 521 NNVPKKLNMFYNNF 534


>AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase
           protein.
          Length = 567

 Score = 21.4 bits (43), Expect = 4.6
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = -1

Query: 322 NNVARAISSFYNKF 281
           NNV + ++ FYN F
Sbjct: 521 NNVPKKLNMFYNNF 534


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 111,443
Number of Sequences: 438
Number of extensions: 2366
Number of successful extensions: 7
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 11697255
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)