Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmov10j12
         (609 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q05FW9 Cluster: Putative uncharacterized protein; n=1; ...    34   3.0  
UniRef50_Q4A7T0 Cluster: Putative uncharacterized protein; n=4; ...    33   7.0  
UniRef50_Q55A51 Cluster: Putative uncharacterized protein; n=2; ...    33   7.0  
UniRef50_O67097 Cluster: Organic solvent tolerance protein; n=1;...    32   9.3  

>UniRef50_Q05FW9 Cluster: Putative uncharacterized protein; n=1;
           Candidatus Carsonella ruddii PV|Rep: Putative
           uncharacterized protein - Carsonella ruddii (strain PV)
          Length = 208

 Score = 33.9 bits (74), Expect = 3.0
 Identities = 24/65 (36%), Positives = 34/65 (52%)
 Frame = +2

Query: 248 NSINYYNHFLFTDNSANSIHPLFVNYNLALLVKINNHNDLINLFPWTFKIIIDFSIFWN* 427
           N+ NYY+   F +N  N I+ L + YN  +   INN N +INL     K II   I +  
Sbjct: 46  NNYNYYSIINFINN--NKIYVLKIKYNSII---INNSNIIINLINDLKKKIIKKKIIFKI 100

Query: 428 RNLIS 442
            N++S
Sbjct: 101 LNILS 105


>UniRef50_Q4A7T0 Cluster: Putative uncharacterized protein; n=4;
           Mycoplasma hyopneumoniae|Rep: Putative uncharacterized
           protein - Mycoplasma hyopneumoniae (strain 7448)
          Length = 295

 Score = 32.7 bits (71), Expect = 7.0
 Identities = 19/51 (37%), Positives = 29/51 (56%), Gaps = 2/51 (3%)
 Frame = +2

Query: 272 FLFTDNSANSIHPLFVNYNLALLV--KINNHNDLINLFPWTFKIIIDFSIF 418
           FL T NS+ S      ++NL  LV  +++   DL   F W+F I +DF++F
Sbjct: 135 FLLTSNSSRSTCSFLFSWNLFELVWSELDTGPDLFKWF-WSFLIWLDFAVF 184


>UniRef50_Q55A51 Cluster: Putative uncharacterized protein; n=2;
           Dictyostelium discoideum|Rep: Putative uncharacterized
           protein - Dictyostelium discoideum AX4
          Length = 107

 Score = 32.7 bits (71), Expect = 7.0
 Identities = 18/49 (36%), Positives = 29/49 (59%), Gaps = 4/49 (8%)
 Frame = +2

Query: 257 NYYNHFLFTDNSANSIHPLFV---NYNLAL-LVKINNHNDLINLFPWTF 391
           NYY +  F  N+ NSI  +++   NYNL    + I+N N+ I++ P+ F
Sbjct: 36  NYYENINFNQNNLNSIIKIYIGYGNYNLTCQSISISNFNN-ISISPYNF 83


>UniRef50_O67097 Cluster: Organic solvent tolerance protein; n=1;
           Aquifex aeolicus|Rep: Organic solvent tolerance protein
           - Aquifex aeolicus
          Length = 653

 Score = 32.3 bits (70), Expect = 9.3
 Identities = 12/21 (57%), Positives = 16/21 (76%)
 Frame = -1

Query: 564 TLTYVIYSKNINNYLFFFRTM 502
           T TY+IY K   NYLF+F+T+
Sbjct: 303 TKTYLIYEKETKNYLFYFQTV 323


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 504,688,104
Number of Sequences: 1657284
Number of extensions: 9019640
Number of successful extensions: 18036
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 17295
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18027
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 43562448615
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)