Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmov10j12
         (609 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1 pr...    27   0.36 
AF008575-1|AAB87764.1|  525|Anopheles gambiae chitinase protein.       27   0.36 
Y17704-1|CAA76824.2|  401|Anopheles gambiae hypothetical protein...    23   7.7  

>AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1
            precursor protein.
          Length = 1623

 Score = 27.5 bits (58), Expect = 0.36
 Identities = 12/32 (37%), Positives = 18/32 (56%)
 Frame = -3

Query: 190  CRPKKFAAPGTCLDCPYSLVNKFKNALNRHKA 95
            C+  K+     CLDCP +  N  ++A N H+A
Sbjct: 1019 CKENKYDRHQGCLDCP-ACYNLVQDAANDHRA 1049


>AF008575-1|AAB87764.1|  525|Anopheles gambiae chitinase protein.
          Length = 525

 Score = 27.5 bits (58), Expect = 0.36
 Identities = 12/30 (40%), Positives = 15/30 (50%)
 Frame = +1

Query: 25  DGPLKDIFVDIIPHPVSCRAYFWELYVCLT 114
           DGP        +PHP +C  Y    Y+CLT
Sbjct: 467 DGPCAGGRYGFVPHPTNCARY----YICLT 492


>Y17704-1|CAA76824.2|  401|Anopheles gambiae hypothetical protein
           protein.
          Length = 401

 Score = 23.0 bits (47), Expect = 7.7
 Identities = 11/33 (33%), Positives = 15/33 (45%)
 Frame = +2

Query: 221 YQDCSI*LINSINYYNHFLFTDNSANSIHPLFV 319
           YQ C I      N  ++FLF  N  +  HP  +
Sbjct: 64  YQQCRINASERANLRDNFLFRLNHWHDDHPFLL 96


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 543,619
Number of Sequences: 2352
Number of extensions: 10148
Number of successful extensions: 20
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 59291487
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)