Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmov10j11
(593 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_29143| Best HMM Match : No HMM Matches (HMM E-Value=.) 69 2e-12
SB_4797| Best HMM Match : LRR_1 (HMM E-Value=6.7e-13) 54 9e-08
SB_6824| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 3e-04
SB_21992| Best HMM Match : LRR_1 (HMM E-Value=3.2e-07) 40 0.001
SB_21653| Best HMM Match : LRR_1 (HMM E-Value=0.00021) 39 0.003
SB_37439| Best HMM Match : Guanylate_kin (HMM E-Value=2.3e-21) 38 0.005
SB_30526| Best HMM Match : LRR_1 (HMM E-Value=8e-08) 38 0.005
SB_21415| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.011
SB_16001| Best HMM Match : LRR_1 (HMM E-Value=0.035) 36 0.033
SB_8041| Best HMM Match : LRR_1 (HMM E-Value=1.2e-06) 34 0.075
SB_52093| Best HMM Match : LRR_1 (HMM E-Value=1.3e-05) 34 0.099
SB_26267| Best HMM Match : TSP_C (HMM E-Value=0) 34 0.099
SB_642| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.30
SB_24803| Best HMM Match : LRR_1 (HMM E-Value=0.0066) 32 0.40
SB_57674| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.53
SB_17627| Best HMM Match : F_actin_cap_B (HMM E-Value=0) 31 0.70
SB_9229| Best HMM Match : LRR_1 (HMM E-Value=0.038) 30 1.2
SB_40911| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.6
SB_51907| Best HMM Match : Spectrin (HMM E-Value=0.023) 29 2.1
SB_13884| Best HMM Match : LRR_1 (HMM E-Value=6.3e-06) 29 2.8
SB_12300| Best HMM Match : UCH (HMM E-Value=6e-18) 29 3.7
SB_25669| Best HMM Match : LRR_1 (HMM E-Value=9.1e-33) 29 3.7
SB_3515| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.7
SB_56315| Best HMM Match : Collagen (HMM E-Value=0.00013) 28 6.5
SB_54894| Best HMM Match : RuvB_C (HMM E-Value=2.3) 28 6.5
SB_53824| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.5
SB_32869| Best HMM Match : Toxin_7 (HMM E-Value=3.9) 28 6.5
SB_40462| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.6
SB_20104| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.6
SB_13921| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.6
SB_43442| Best HMM Match : BNR (HMM E-Value=0.00033) 27 8.6
SB_42354| Best HMM Match : GETHR (HMM E-Value=5.3) 27 8.6
>SB_29143| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 123
Score = 69.3 bits (162), Expect = 2e-12
Identities = 29/60 (48%), Positives = 38/60 (63%)
Frame = +1
Query: 409 LLSNKACPNQLSDVDKDDSDYQRYRYYVIYKIPHLRFLDSXXXXXXXXXXXXXXGEFMKV 588
+L N ACPN+LS D D+ DYQRYRYY+++K+P L+FLDS G FMK+
Sbjct: 1 MLGNMACPNELSFTDHDEEDYQRYRYYILHKLPKLKFLDSRTVKEQERQEAMRVGAFMKI 60
>SB_4797| Best HMM Match : LRR_1 (HMM E-Value=6.7e-13)
Length = 335
Score = 54.0 bits (124), Expect = 9e-08
Identities = 36/112 (32%), Positives = 60/112 (53%)
Frame = +1
Query: 190 LDLSYNSIETLKGLEQFARLEELILDNNQLSDGIKFPKLPYLKTLSLNNNQIANLEDLVD 369
LDLS+N+IE ++GL++ +L++L L NN+++ L L S+ NN + L++++
Sbjct: 92 LDLSFNNIEVIEGLDKLTKLKDLTLYNNRITKIENMDSLTNLHVFSIGNNSLKQLDNVI- 150
Query: 370 KIRENFPVLSYLSLLSNKACPNQLSDVDKDDSDYQRYRYYVIYKIPHLRFLD 525
F L L+L N C +DS +Y+ YVI +P L +LD
Sbjct: 151 -YLRRFKNLRTLNLSFNPFC---------EDS---KYKEYVIAHLPDLVYLD 189
>SB_6824| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1152
Score = 42.3 bits (95), Expect = 3e-04
Identities = 33/113 (29%), Positives = 56/113 (49%)
Frame = +1
Query: 190 LDLSYNSIETLKGLEQFARLEELILDNNQLSDGIKFPKLPYLKTLSLNNNQIANLEDLVD 369
L +S +S++ L G+++ L+++ +N +S L L L LNNN I +EDL +
Sbjct: 43 LCVSESSLKELSGIDKCTNLKKVYFYDNHISKIENLSSLTRLTVLWLNNNNIQAIEDLTN 102
Query: 370 KIRENFPVLSYLSLLSNKACPNQLSDVDKDDSDYQRYRYYVIYKIPHLRFLDS 528
+ + P L LSL PN +S + Y ++++ +P L LDS
Sbjct: 103 LV--HLPHLKSLSLKDPTYGPNPVSLL-------CNYATHLLFHLPKLTRLDS 146
Score = 39.1 bits (87), Expect = 0.003
Identities = 27/67 (40%), Positives = 37/67 (55%)
Frame = +1
Query: 220 LKGLEQFARLEELILDNNQLSDGIKFPKLPYLKTLSLNNNQIANLEDLVDKIRENFPVLS 399
+KG E + LEEL L+ N +S + P LK L+L++N NL L + E P L
Sbjct: 1065 VKGFESCSSLEELSLEGNCISKFEGLVRNPKLKWLNLSSN---NLTILDTGMLERLPELR 1121
Query: 400 YLSLLSN 420
YLSL +N
Sbjct: 1122 YLSLENN 1128
Score = 33.5 bits (73), Expect = 0.13
Identities = 23/60 (38%), Positives = 32/60 (53%), Gaps = 2/60 (3%)
Frame = +1
Query: 190 LDLSYNSIETLKGLEQFARLEELILDNNQLS--DGIKFPKLPYLKTLSLNNNQIANLEDL 363
L L N I +GL + +L+ L L +N L+ D +LP L+ LSL NN I L+ L
Sbjct: 1077 LSLEGNCISKFEGLVRNPKLKWLNLSSNNLTILDTGMLERLPELRYLSLENNNITCLKGL 1136
>SB_21992| Best HMM Match : LRR_1 (HMM E-Value=3.2e-07)
Length = 534
Score = 40.3 bits (90), Expect = 0.001
Identities = 29/106 (27%), Positives = 50/106 (47%)
Frame = +1
Query: 133 DCKKIPPALQKMYGAKVKCLDLSYNSIETLKGLEQFARLEELILDNNQLSDGIKFPKLPY 312
+C I + ++KCL L N ++ ++ LE+ L+ L + NN + LP
Sbjct: 20 ECNGIEKIENLGFMKELKCLYLQQNMLKKVENLEELDGLDTLNVSNNIIRSIENIACLPV 79
Query: 313 LKTLSLNNNQIANLEDLVDKIRENFPVLSYLSLLSNKACPNQLSDV 450
L TL + +N++A+ D+ K + LS + L NK + DV
Sbjct: 80 LNTLQIAHNRLASAGDI--KELASCQKLSIVDLSYNKIDDPNIVDV 123
>SB_21653| Best HMM Match : LRR_1 (HMM E-Value=0.00021)
Length = 198
Score = 39.1 bits (87), Expect = 0.003
Identities = 21/77 (27%), Positives = 39/77 (50%)
Frame = +1
Query: 133 DCKKIPPALQKMYGAKVKCLDLSYNSIETLKGLEQFARLEELILDNNQLSDGIKFPKLPY 312
+C I + ++KCL L N ++ ++ LE+ L+ L + NN + LP
Sbjct: 112 ECNGIEKIENLGFMKELKCLYLQQNMLKKMENLEELDGLDTLNVSNNIIRSIENIACLPV 171
Query: 313 LKTLSLNNNQIANLEDL 363
L TL + +N++A+ D+
Sbjct: 172 LNTLQIAHNRLASAGDI 188
>SB_37439| Best HMM Match : Guanylate_kin (HMM E-Value=2.3e-21)
Length = 609
Score = 38.3 bits (85), Expect = 0.005
Identities = 26/86 (30%), Positives = 48/86 (55%), Gaps = 3/86 (3%)
Frame = +1
Query: 190 LDLSYNSIETLKGLEQFARLEELILDNNQLSD--GIKF-PKLPYLKTLSLNNNQIANLED 360
L+L+ N I ++KGL+ L+E+ L NQ+ D +++ +L L+ L+L +N I +L D
Sbjct: 196 LNLASNCIRSMKGLQGHPMLQEVDLQENQIIDIAEVRYIRELKLLRNLNLQSNPIQSLPD 255
Query: 361 LVDKIRENFPVLSYLSLLSNKACPNQ 438
++ F + + L L +K P +
Sbjct: 256 Y--RLSLLFRIQTLLELDKSKVTPEE 279
>SB_30526| Best HMM Match : LRR_1 (HMM E-Value=8e-08)
Length = 219
Score = 38.3 bits (85), Expect = 0.005
Identities = 25/65 (38%), Positives = 40/65 (61%), Gaps = 1/65 (1%)
Frame = +1
Query: 232 EQFARLEELILDNNQLSDGIKFPKLPYLKTLSLNNNQIAN-LEDLVDKIRENFPVLSYLS 408
++F +LE L + N L+ FPKLP L+ L L++N+I++ L++L P L++LS
Sbjct: 35 DEFVKLEILSMINVGLTTLKNFPKLPNLRKLELSDNRISSGLQNLTGS-----PKLTHLS 89
Query: 409 LLSNK 423
L NK
Sbjct: 90 LSGNK 94
>SB_21415| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 539
Score = 37.1 bits (82), Expect = 0.011
Identities = 27/77 (35%), Positives = 39/77 (50%)
Frame = +1
Query: 190 LDLSYNSIETLKGLEQFARLEELILDNNQLSDGIKFPKLPYLKTLSLNNNQIANLEDLVD 369
L+L N I ++GL+ L L L +NQ+S L YL+ L+L+ N+I +E L
Sbjct: 39 LNLHSNHISKIEGLQHLQNLRHLDLSSNQISHIEGLTSLGYLRVLNLSCNRIYLVEGL-- 96
Query: 370 KIRENFPVLSYLSLLSN 420
EN L+ L L N
Sbjct: 97 ---ENLRKLTKLDLSYN 110
>SB_16001| Best HMM Match : LRR_1 (HMM E-Value=0.035)
Length = 277
Score = 35.5 bits (78), Expect = 0.033
Identities = 22/63 (34%), Positives = 33/63 (52%), Gaps = 2/63 (3%)
Frame = +1
Query: 181 VKC--LDLSYNSIETLKGLEQFARLEELILDNNQLSDGIKFPKLPYLKTLSLNNNQIANL 354
++C + L N+++ L + R L L N +SD K PK+P L+ LSL N I +L
Sbjct: 189 IRCENIQLMDNALKDLNSVG-LPRCTHLYLQRNYISDLRKLPKVPMLEHLSLQQNSIESL 247
Query: 355 EDL 363
L
Sbjct: 248 AGL 250
>SB_8041| Best HMM Match : LRR_1 (HMM E-Value=1.2e-06)
Length = 192
Score = 34.3 bits (75), Expect = 0.075
Identities = 23/59 (38%), Positives = 32/59 (54%), Gaps = 4/59 (6%)
Frame = +1
Query: 181 VKCLDLSYNSIETLKG-LEQFARLEELILDNNQLSDGIKFPK---LPYLKTLSLNNNQI 345
++ LDLS+N + T+ L F L+ L L N +SD + K LP L T+SL N I
Sbjct: 89 LELLDLSFNELSTIDPVLLDFPNLKILCLQGNNISDLHEIDKLAALPNLHTISLQGNPI 147
>SB_52093| Best HMM Match : LRR_1 (HMM E-Value=1.3e-05)
Length = 252
Score = 33.9 bits (74), Expect = 0.099
Identities = 24/63 (38%), Positives = 33/63 (52%), Gaps = 3/63 (4%)
Frame = +1
Query: 178 KVKCLDLSYNSIETLKGLEQFARLEELILDNNQLS---DGIKFPKLPYLKTLSLNNNQIA 348
++K LDLS N+I++L+G+E LE L L N +S D L LK L L N +
Sbjct: 49 RLKNLDLSRNAIQSLQGVESLQLLETLNLYYNNISYLQDLSALKYLTNLKELDLRLNPVT 108
Query: 349 NLE 357
E
Sbjct: 109 KNE 111
>SB_26267| Best HMM Match : TSP_C (HMM E-Value=0)
Length = 2996
Score = 33.9 bits (74), Expect = 0.099
Identities = 27/68 (39%), Positives = 38/68 (55%), Gaps = 7/68 (10%)
Frame = +1
Query: 172 GAKVKCLDLSYNSIETLKGLEQFARLE---ELILDNNQLSDGIKFPKLPY----LKTLSL 330
G+ ++ LDLSYN I TLK + FA L +++L NN+L I+ P +P L L L
Sbjct: 591 GSSIRILDLSYNEIRTLKE-DAFAGLSSSYKVMLRNNKL---IQSPLIPLAHLNLVVLDL 646
Query: 331 NNNQIANL 354
NQI +
Sbjct: 647 QFNQIPTI 654
>SB_642| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2229
Score = 32.3 bits (70), Expect = 0.30
Identities = 21/58 (36%), Positives = 31/58 (53%), Gaps = 1/58 (1%)
Frame = +1
Query: 190 LDLSYNSIETL-KGLEQFARLEELILDNNQLSDGIKFPKLPYLKTLSLNNNQIANLED 360
LDL N + + GL + L+ L L +N+L+D + P LKTL L+ N + L D
Sbjct: 399 LDLQKNKLRKIPSGLLKMTCLKYLDLSDNELTDLPRKEWSPVLKTLYLSGNLLETLPD 456
>SB_24803| Best HMM Match : LRR_1 (HMM E-Value=0.0066)
Length = 727
Score = 31.9 bits (69), Expect = 0.40
Identities = 26/82 (31%), Positives = 45/82 (54%), Gaps = 4/82 (4%)
Frame = +1
Query: 151 PALQKMYGAKV-KCLDLSYNSIETLKGLEQFARLEELILDNNQLSDGIKFPK--LPYLKT 321
P ++++ G ++ + LDL N++ L L EL LD+N + K LP L+T
Sbjct: 220 PNVKEIEGCQLLENLDLRANNLLQPPSLTNHVLLRELRLDDNSICTLEPLAKSWLPLLET 279
Query: 322 LSLNNNQIANLEDLVD-KIREN 384
LS++ N+ A +D+ + KI +N
Sbjct: 280 LSVSQNRNAISQDIPNLKIFDN 301
Score = 31.1 bits (67), Expect = 0.70
Identities = 16/49 (32%), Positives = 29/49 (59%)
Frame = +1
Query: 217 TLKGLEQFARLEELILDNNQLSDGIKFPKLPYLKTLSLNNNQIANLEDL 363
TL + ++L++L LD+NQL L L+TLS +N + N++++
Sbjct: 177 TLGDIASCSKLQKLSLDHNQLIATKGLSSLRVLQTLSCAHNHLPNVKEI 225
>SB_57674| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 424
Score = 31.5 bits (68), Expect = 0.53
Identities = 26/78 (33%), Positives = 39/78 (50%), Gaps = 1/78 (1%)
Frame = +1
Query: 109 NVLSYCGQDCKKIPPALQKMYGAKVKCLDLSYNSIETLKGLEQFA-RLEELILDNNQLSD 285
+ LS GQ +I + + A ++ LDLS N + L+ + F L +L L NNQL+
Sbjct: 28 DTLSLQGQGLSQIESEILQQLTA-IEELDLSNNKLVKLQLQDVFLPSLTKLNLANNQLAT 86
Query: 286 GIKFPKLPYLKTLSLNNN 339
F P L L++ NN
Sbjct: 87 LEGFTAFPNLVDLNITNN 104
>SB_17627| Best HMM Match : F_actin_cap_B (HMM E-Value=0)
Length = 480
Score = 31.1 bits (67), Expect = 0.70
Identities = 17/54 (31%), Positives = 28/54 (51%)
Frame = +1
Query: 184 KCLDLSYNSIETLKGLEQFARLEELILDNNQLSDGIKFPKLPYLKTLSLNNNQI 345
+ LDLS+N I+ ++ L +LE+L L N++ L L + L N+I
Sbjct: 334 RILDLSFNVIKVIENLNSLTKLEKLYLVQNKIGRIEGLEHLTELTMVELGANKI 387
Score = 30.7 bits (66), Expect = 0.93
Identities = 22/53 (41%), Positives = 32/53 (60%)
Frame = +1
Query: 205 NSIETLKGLEQFARLEELILDNNQLSDGIKFPKLPYLKTLSLNNNQIANLEDL 363
N I LKGLE LEEL + +N GI+ ++ L++L N+NQ+ + EDL
Sbjct: 390 NRIVELKGLEHLESLEELYISHN----GIE--EIKGLESL-FNDNQLKHWEDL 435
>SB_9229| Best HMM Match : LRR_1 (HMM E-Value=0.038)
Length = 92
Score = 30.3 bits (65), Expect = 1.2
Identities = 22/53 (41%), Positives = 32/53 (60%)
Frame = +1
Query: 205 NSIETLKGLEQFARLEELILDNNQLSDGIKFPKLPYLKTLSLNNNQIANLEDL 363
N I LKGLE LEEL + +N GI+ ++ L++L N+NQ+ + EDL
Sbjct: 2 NRIVELKGLEHLDSLEELYISHN----GIE--EIKGLESL-FNDNQLEHWEDL 47
>SB_40911| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 210
Score = 29.9 bits (64), Expect = 1.6
Identities = 19/56 (33%), Positives = 30/56 (53%)
Frame = +1
Query: 190 LDLSYNSIETLKGLEQFARLEELILDNNQLSDGIKFPKLPYLKTLSLNNNQIANLE 357
L+LS NSI L+GLE L+ L + NQ+ + P + L+ L + + +LE
Sbjct: 155 LNLSRNSITKLEGLESLVHLQVLNISRNQIQT-LPAPLMKKLRELRVFHFAYNSLE 209
>SB_51907| Best HMM Match : Spectrin (HMM E-Value=0.023)
Length = 231
Score = 29.5 bits (63), Expect = 2.1
Identities = 16/50 (32%), Positives = 27/50 (54%)
Frame = +1
Query: 241 ARLEELILDNNQLSDGIKFPKLPYLKTLSLNNNQIANLEDLVDKIRENFP 390
A+L+ L+ + ++ IK KLP T Q+ N+ED +++ E FP
Sbjct: 134 AKLKGLLEKGRKKTEHIKAEKLP--DTREETERQLKNIEDFQEEMMEEFP 181
>SB_13884| Best HMM Match : LRR_1 (HMM E-Value=6.3e-06)
Length = 575
Score = 29.1 bits (62), Expect = 2.8
Identities = 23/67 (34%), Positives = 32/67 (47%), Gaps = 2/67 (2%)
Frame = +1
Query: 226 GLEQFARLEELILDNNQLS--DGIKFPKLPYLKTLSLNNNQIANLEDLVDKIRENFPVLS 399
GL+ F L L L+NN +S F L L++L+L +N I+ E I + P L
Sbjct: 123 GLQMFTNLINLTLENNSISAIAPHAFKGLDNLQSLNLRHNNISLWE---GNISRDLPSLE 179
Query: 400 YLSLLSN 420
L L N
Sbjct: 180 ILELDGN 186
>SB_12300| Best HMM Match : UCH (HMM E-Value=6e-18)
Length = 457
Score = 28.7 bits (61), Expect = 3.7
Identities = 28/104 (26%), Positives = 43/104 (41%), Gaps = 1/104 (0%)
Frame = +1
Query: 157 LQKMYGAKVKCLDLSYNSIETLKGLEQFARLEELILDNNQLSDGIKFPKLPYLKTLSLNN 336
+ K+Y K+K Y ++ LE FA E L N G+KF PYL T+ L
Sbjct: 296 INKLYQGKLK----DYVKCLEMESLEAFAAPETLDGSNQ----GLKFLTFPYLLTIQLKR 347
Query: 337 NQIANLEDLVDKIRENFPVLSYLSLLSNKACPNQL-SDVDKDDS 465
+ K+ + +L L + ++ SD D+ DS
Sbjct: 348 FAFDYVTLHRIKLNDRMTFAKFLDLNKFASADREMNSDADELDS 391
>SB_25669| Best HMM Match : LRR_1 (HMM E-Value=9.1e-33)
Length = 1065
Score = 28.7 bits (61), Expect = 3.7
Identities = 19/50 (38%), Positives = 24/50 (48%)
Frame = +1
Query: 274 QLSDGIKFPKLPYLKTLSLNNNQIANLEDLVDKIRENFPVLSYLSLLSNK 423
+L F YLK L L+NN I+ D+ D EN L L+L NK
Sbjct: 82 KLLKNTSFQDYQYLKWLDLSNNDIS---DIQDGTFENLRYLKQLNLGENK 128
>SB_3515| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1295
Score = 28.7 bits (61), Expect = 3.7
Identities = 20/71 (28%), Positives = 38/71 (53%), Gaps = 7/71 (9%)
Frame = +1
Query: 253 ELILDNNQLSD-------GIKFPKLPYLKTLSLNNNQIANLEDLVDKIRENFPVLSYLSL 411
+ I++N QL D + F + L + ++ + ++ DL+++ R+ VLS +
Sbjct: 219 DYIINNGQLKDPDVQKTIAVNFTVVLITVGLCVVSSVLCSVSDLIEEKRKRMHVLSAAAA 278
Query: 412 LSNKACPNQLS 444
L+N A PN+LS
Sbjct: 279 LANSA-PNKLS 288
>SB_56315| Best HMM Match : Collagen (HMM E-Value=0.00013)
Length = 898
Score = 27.9 bits (59), Expect = 6.5
Identities = 19/61 (31%), Positives = 29/61 (47%)
Frame = +3
Query: 144 NSTGLTENVWCQSEMFRSKLQQYRNIKGSRTVREAGGVDFRQQPVE*RNQVSKVAIFKNS 323
N T T NV C+ KLQQ IKG+ R++ + R+ ++K+AI S
Sbjct: 592 NPTLFTSNVMCEELSGDVKLQQITLIKGNINKALEHHRQVRKKYAKSRSVINKIAIGSGS 651
Query: 324 V 326
+
Sbjct: 652 L 652
>SB_54894| Best HMM Match : RuvB_C (HMM E-Value=2.3)
Length = 148
Score = 27.9 bits (59), Expect = 6.5
Identities = 17/47 (36%), Positives = 24/47 (51%)
Frame = +1
Query: 205 NSIETLKGLEQFARLEELILDNNQLSDGIKFPKLPYLKTLSLNNNQI 345
N I LKGLE LEEL + +N GI+ K+ + T+ L +
Sbjct: 2 NRIVELKGLEHLDSLEELYISHN----GIEEIKIKLIDTVDLEGGPV 44
>SB_53824| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 740
Score = 27.9 bits (59), Expect = 6.5
Identities = 23/79 (29%), Positives = 41/79 (51%)
Frame = +1
Query: 229 LEQFARLEELILDNNQLSDGIKFPKLPYLKTLSLNNNQIANLEDLVDKIRENFPVLSYLS 408
L+QF ++ +N + FP L LKT+ LNNN++ + + + E P L +
Sbjct: 531 LDQFDTID---FSDNDIRKIEGFPLLKRLKTILLNNNRVCR---VAEGLGECLPNLESI- 583
Query: 409 LLSNKACPNQLSDVDKDDS 465
+L+N A +L D++ +S
Sbjct: 584 ILTNNAM-QELKDLEPLES 601
>SB_32869| Best HMM Match : Toxin_7 (HMM E-Value=3.9)
Length = 910
Score = 27.9 bits (59), Expect = 6.5
Identities = 14/37 (37%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
Frame = +3
Query: 225 GSRTVREAGGVDFRQQPVE*RNQVSKVAIFKNS-VPQ 332
G+R + AGG+ R QP+ ++ V V F + VPQ
Sbjct: 302 GNRRISRAGGLVVRPQPISDKSYVESVVSFLHDVVPQ 338
>SB_40462| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1580
Score = 27.5 bits (58), Expect = 8.6
Identities = 20/67 (29%), Positives = 33/67 (49%), Gaps = 2/67 (2%)
Frame = +1
Query: 307 PYLKTLSLNNNQIANLEDLVDKIRENFPVLSYLSLLSNKACPNQLSDVD--KDDSDYQRY 480
P+L+ L +A E+ K+R P +S LS + + N++ DVD DD ++
Sbjct: 252 PFLQLLK----SLAGEEESAAKVRVGVPYVSCLSSYTEQLRENKIGDVDCIGDDQVWKII 307
Query: 481 RYYVIYK 501
V+YK
Sbjct: 308 TPKVLYK 314
>SB_20104| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 477
Score = 27.5 bits (58), Expect = 8.6
Identities = 13/52 (25%), Positives = 26/52 (50%)
Frame = -2
Query: 268 CLKSTPPASRTVRDPLMFRYCCNLDLNISLWHHTFSVRPVEFFYSLARNSLE 113
CL+ P + ++ + L+ LDLN+ HT + V + ++ N+L+
Sbjct: 60 CLRVIPKRNHSIWEALLSLCKKALDLNVLSTTHTINAENVSVTFDISTNALQ 111
>SB_13921| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 688
Score = 27.5 bits (58), Expect = 8.6
Identities = 22/55 (40%), Positives = 27/55 (49%), Gaps = 3/55 (5%)
Frame = +1
Query: 190 LDLSY-NSIETLKGLEQFARLEELILDNNQLSD--GIKFPKLPYLKTLSLNNNQI 345
LDL+ N IE + LE L L+ N L+ F +LP LK L L NN I
Sbjct: 22 LDLNRKNLIEIPPKVLDLQHLEFLYLEGNYLTTLPETLFERLPNLKWLDLRNNHI 76
>SB_43442| Best HMM Match : BNR (HMM E-Value=0.00033)
Length = 510
Score = 27.5 bits (58), Expect = 8.6
Identities = 14/50 (28%), Positives = 27/50 (54%)
Frame = +1
Query: 157 LQKMYGAKVKCLDLSYNSIETLKGLEQFARLEELILDNNQLSDGIKFPKL 306
++ M G + + + NSI T+ ++ + + LD N+L GIKF ++
Sbjct: 220 VESMNGTYITSIMNADNSISTVITFDRGGEWKPIPLDQNKLCKGIKFNQM 269
>SB_42354| Best HMM Match : GETHR (HMM E-Value=5.3)
Length = 162
Score = 27.5 bits (58), Expect = 8.6
Identities = 19/57 (33%), Positives = 25/57 (43%), Gaps = 1/57 (1%)
Frame = -2
Query: 505 VSCILHSTCIFG-SRSRLCPRRKVGWDTLCYLED*GKTTRGSSPLFYQRDPPNWLSD 338
+S +H T SR R +DTL + TTR PL +R PP W S+
Sbjct: 9 ISANIHDTVRHSTSRCDTVRYRTTQYDTLRH-----STTRPGDPLVLERPPPRWSSN 60
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,485,587
Number of Sequences: 59808
Number of extensions: 361843
Number of successful extensions: 2287
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 2237
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2283
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1427401750
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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