Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmov10j10
         (617 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory recept...    23   2.1  
AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory recept...    22   3.6  
AM712901-1|CAN84640.1|  205|Tribolium castaneum hypothetical pro...    22   4.7  
X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.       21   6.3  
AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory recept...    21   6.3  
AY362544-1|AAQ63456.1|  268|Tribolium castaneum chitin synthase ...    21   8.3  
AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase ...    21   8.3  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    21   8.3  
AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein pr...    21   8.3  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    21   8.3  

>AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory receptor
           candidate 5 protein.
          Length = 522

 Score = 23.0 bits (47), Expect = 2.1
 Identities = 11/27 (40%), Positives = 14/27 (51%)
 Frame = +1

Query: 409 KYICTECLDMLKVALNFKTNCETADKK 489
           + I   CLD L +ALN  T   T  K+
Sbjct: 63  RLIVQTCLDFLLLALNISTILTTVRKQ 89


>AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory receptor
           candidate 2 protein.
          Length = 587

 Score = 22.2 bits (45), Expect = 3.6
 Identities = 7/16 (43%), Positives = 11/16 (68%)
 Frame = +3

Query: 114 CCRIIYNGVLHYEVNV 161
           C + + +G+ HY VNV
Sbjct: 489 CSKTVSDGIRHYYVNV 504


>AM712901-1|CAN84640.1|  205|Tribolium castaneum hypothetical
           protein protein.
          Length = 205

 Score = 21.8 bits (44), Expect = 4.7
 Identities = 10/33 (30%), Positives = 16/33 (48%)
 Frame = +1

Query: 97  LNFCVNAAGLSIMAFYITKSMLSKFNKESYQPY 195
           L  CV +A    +   I  S L  ++KE Y+ +
Sbjct: 5   LTACVGSAIAGFLFLLICDSYLKIYHKEKYRKF 37


>X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.
          Length = 524

 Score = 21.4 bits (43), Expect = 6.3
 Identities = 13/62 (20%), Positives = 24/62 (38%)
 Frame = +1

Query: 337 NSYDIISAIRSIANITIDLDDSLPKYICTECLDMLKVALNFKTNCETADKKFRKLLNPMG 516
           N  D     +S+ N  +    ++ +Y C +C    K   + K +          +L+  G
Sbjct: 262 NKCDYTCVNKSMLNSHMKSHSNVYRYSCRDCSYATKYCHSLKIHLRRYGHTPNVVLDEEG 321

Query: 517 NP 522
           NP
Sbjct: 322 NP 323


>AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory receptor
           candidate 57 protein.
          Length = 387

 Score = 21.4 bits (43), Expect = 6.3
 Identities = 7/19 (36%), Positives = 11/19 (57%)
 Frame = +1

Query: 427 CLDMLKVALNFKTNCETAD 483
           C D+ +V  N+ + CE  D
Sbjct: 216 CYDLRRVRKNYNSICELVD 234


>AY362544-1|AAQ63456.1|  268|Tribolium castaneum chitin synthase
           protein.
          Length = 268

 Score = 21.0 bits (42), Expect = 8.3
 Identities = 6/17 (35%), Positives = 10/17 (58%)
 Frame = +2

Query: 149 RSQCYQNLIRNHINLIH 199
           + QC   ++R H+ L H
Sbjct: 14  QDQCSHRIVREHLGLKH 30


>AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase
           protein.
          Length = 677

 Score = 21.0 bits (42), Expect = 8.3
 Identities = 6/17 (35%), Positives = 10/17 (58%)
 Frame = +2

Query: 149 RSQCYQNLIRNHINLIH 199
           + QC   ++R H+ L H
Sbjct: 328 QDQCSHRIVREHLGLKH 344


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 21.0 bits (42), Expect = 8.3
 Identities = 6/17 (35%), Positives = 10/17 (58%)
 Frame = +2

Query: 149 RSQCYQNLIRNHINLIH 199
           + QC   ++R H+ L H
Sbjct: 561 QDQCSHRIVREHLGLKH 577


>AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein
           protein.
          Length = 392

 Score = 21.0 bits (42), Expect = 8.3
 Identities = 7/19 (36%), Positives = 11/19 (57%)
 Frame = +1

Query: 277 KEMICRVCARNGCTPLTEK 333
           K  +CR+C ++   P T K
Sbjct: 248 KPNVCRICGKSYARPSTLK 266


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 21.0 bits (42), Expect = 8.3
 Identities = 6/17 (35%), Positives = 10/17 (58%)
 Frame = +2

Query: 149 RSQCYQNLIRNHINLIH 199
           + QC   ++R H+ L H
Sbjct: 561 QDQCSHRIVREHLGLKH 577


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 142,942
Number of Sequences: 336
Number of extensions: 3227
Number of successful extensions: 11
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15770591
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)