Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmov10j10
         (617 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z70286-3|CAA94296.1|  298|Caenorhabditis elegans Hypothetical pr...    29   2.7  
Z49207-1|CAA89074.1|  242|Caenorhabditis elegans Hypothetical pr...    29   2.7  
U28729-6|AAA68292.1|  549|Caenorhabditis elegans Phosphodiestera...    28   4.6  
U28729-5|AAO38607.1|  674|Caenorhabditis elegans Phosphodiestera...    28   4.6  
U28729-4|AAN60496.1|  599|Caenorhabditis elegans Phosphodiestera...    28   4.6  
U28729-3|AAO38608.1|  612|Caenorhabditis elegans Phosphodiestera...    28   4.6  
U28729-2|AAK77625.1|  626|Caenorhabditis elegans Phosphodiestera...    28   4.6  
U28729-1|ABB88209.1|  673|Caenorhabditis elegans Phosphodiestera...    28   4.6  
U10414-9|AAA19072.1|  712|Caenorhabditis elegans Hypothetical pr...    28   6.1  
AL021487-2|CAA16353.1|  413|Caenorhabditis elegans Hypothetical ...    28   6.1  

>Z70286-3|CAA94296.1|  298|Caenorhabditis elegans Hypothetical
           protein K08C7.7 protein.
          Length = 298

 Score = 29.1 bits (62), Expect = 2.7
 Identities = 20/87 (22%), Positives = 40/87 (45%), Gaps = 6/87 (6%)
 Frame = +1

Query: 262 SLQLSKEMICRVCARNGCTPLT-----EKLNSYDI-ISAIRSIANITIDLDDSLPKYICT 423
           S   S E IC++   + C  +       KL S D+ ++  R++ +I  ++DDS+      
Sbjct: 128 SFSASHESICQLLQASKCRGINFEAVESKLISKDLSLNGYRNLNSICFEMDDSIDGNFFA 187

Query: 424 ECLDMLKVALNFKTNCETADKKFRKLL 504
             LD+ +        C+   K+F +++
Sbjct: 188 SVLDISEARKFIFHACDNIPKEFVRIM 214


>Z49207-1|CAA89074.1|  242|Caenorhabditis elegans Hypothetical
           protein R07E3.2 protein.
          Length = 242

 Score = 29.1 bits (62), Expect = 2.7
 Identities = 21/58 (36%), Positives = 30/58 (51%), Gaps = 3/58 (5%)
 Frame = -1

Query: 182 DSLLNFDNIDFVM*NA---IIDNPAALTQKFNTRIYTKLYIEIHIYFLFQMHKIKFSF 18
           D LLN  N+ F M +     +  PA LT  + +R + K+   IH+ FLF    + FSF
Sbjct: 20  DRLLN--NVRFFMIDRPAKTVREPALLTD-YISRAFDKMPSSIHLIFLFSQCVVLFSF 74


>U28729-6|AAA68292.1|  549|Caenorhabditis elegans Phosphodiesterase
           protein 4, isoforma protein.
          Length = 549

 Score = 28.3 bits (60), Expect = 4.6
 Identities = 12/27 (44%), Positives = 16/27 (59%)
 Frame = +1

Query: 427 CLDMLKVALNFKTNCETADKKFRKLLN 507
           CLD L+     ++  E A  KFRK+LN
Sbjct: 96  CLDQLETIQTHRSVSEMASSKFRKMLN 122


>U28729-5|AAO38607.1|  674|Caenorhabditis elegans Phosphodiesterase
           protein 4, isoformd protein.
          Length = 674

 Score = 28.3 bits (60), Expect = 4.6
 Identities = 12/27 (44%), Positives = 16/27 (59%)
 Frame = +1

Query: 427 CLDMLKVALNFKTNCETADKKFRKLLN 507
           CLD L+     ++  E A  KFRK+LN
Sbjct: 221 CLDQLETIQTHRSVSEMASSKFRKMLN 247


>U28729-4|AAN60496.1|  599|Caenorhabditis elegans Phosphodiesterase
           protein 4, isoformc protein.
          Length = 599

 Score = 28.3 bits (60), Expect = 4.6
 Identities = 12/27 (44%), Positives = 16/27 (59%)
 Frame = +1

Query: 427 CLDMLKVALNFKTNCETADKKFRKLLN 507
           CLD L+     ++  E A  KFRK+LN
Sbjct: 146 CLDQLETIQTHRSVSEMASSKFRKMLN 172


>U28729-3|AAO38608.1|  612|Caenorhabditis elegans Phosphodiesterase
           protein 4, isoforme protein.
          Length = 612

 Score = 28.3 bits (60), Expect = 4.6
 Identities = 12/27 (44%), Positives = 16/27 (59%)
 Frame = +1

Query: 427 CLDMLKVALNFKTNCETADKKFRKLLN 507
           CLD L+     ++  E A  KFRK+LN
Sbjct: 159 CLDQLETIQTHRSVSEMASSKFRKMLN 185


>U28729-2|AAK77625.1|  626|Caenorhabditis elegans Phosphodiesterase
           protein 4, isoformb protein.
          Length = 626

 Score = 28.3 bits (60), Expect = 4.6
 Identities = 12/27 (44%), Positives = 16/27 (59%)
 Frame = +1

Query: 427 CLDMLKVALNFKTNCETADKKFRKLLN 507
           CLD L+     ++  E A  KFRK+LN
Sbjct: 173 CLDQLETIQTHRSVSEMASSKFRKMLN 199


>U28729-1|ABB88209.1|  673|Caenorhabditis elegans Phosphodiesterase
           protein 4, isoformg protein.
          Length = 673

 Score = 28.3 bits (60), Expect = 4.6
 Identities = 12/27 (44%), Positives = 16/27 (59%)
 Frame = +1

Query: 427 CLDMLKVALNFKTNCETADKKFRKLLN 507
           CLD L+     ++  E A  KFRK+LN
Sbjct: 220 CLDQLETIQTHRSVSEMASSKFRKMLN 246


>U10414-9|AAA19072.1|  712|Caenorhabditis elegans Hypothetical
           protein F42A10.1 protein.
          Length = 712

 Score = 27.9 bits (59), Expect = 6.1
 Identities = 15/47 (31%), Positives = 25/47 (53%)
 Frame = +1

Query: 265 LQLSKEMICRVCARNGCTPLTEKLNSYDIISAIRSIANITIDLDDSL 405
           LQ S E +C V A+N C  L + L+  ++  AI+     T  L+ ++
Sbjct: 51  LQASVENLCEVGAKNACQQLLKLLHGDNLPKAIKQQEATTKRLEQTV 97


>AL021487-2|CAA16353.1|  413|Caenorhabditis elegans Hypothetical
           protein Y45F10B.2 protein.
          Length = 413

 Score = 27.9 bits (59), Expect = 6.1
 Identities = 18/58 (31%), Positives = 28/58 (48%), Gaps = 8/58 (13%)
 Frame = +1

Query: 301 ARNGCTPLTEKLNSYDIISAIRSIANITIDLDDSLPK--------YICTECLDMLKVA 450
           AR G   L   L++Y   ++  S+A+  I+L    P         Y+CT C D++K A
Sbjct: 152 ARPGMCRLLRTLHNYATDTSQASLADYMIELSGRAPSPVVVKCGHYLCTACFDIVKNA 209


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,374,727
Number of Sequences: 27780
Number of extensions: 272379
Number of successful extensions: 657
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 637
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 657
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1342816466
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)