BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmov10j09
(517 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF457565-1|AAL68795.1| 391|Anopheles gambiae TRIO protein protein. 26 0.87
DQ370039-1|ABD18600.1| 168|Anopheles gambiae putative TIL domai... 25 1.1
Y17704-1|CAA76824.2| 401|Anopheles gambiae hypothetical protein... 24 2.6
DQ370042-1|ABD18603.1| 194|Anopheles gambiae putative TIL domai... 24 3.5
M93690-2|AAA29363.1| 1212|Anopheles gambiae unknown protein. 23 8.1
AY928182-1|AAX22219.1| 335|Anopheles gambiae phenoloxidase inhi... 23 8.1
AB090817-2|BAC57910.1| 1009|Anopheles gambiae reverse transcript... 23 8.1
>AF457565-1|AAL68795.1| 391|Anopheles gambiae TRIO protein protein.
Length = 391
Score = 25.8 bits (54), Expect = 0.87
Identities = 6/24 (25%), Positives = 17/24 (70%)
Frame = -1
Query: 475 VQQYCENVLQSERWEVISRALLQW 404
+ +YCEN +Q++++ ++ ++W
Sbjct: 60 LNKYCENKIQADQYNLVPLTCIRW 83
>DQ370039-1|ABD18600.1| 168|Anopheles gambiae putative TIL domain
polypeptide protein.
Length = 168
Score = 25.4 bits (53), Expect = 1.1
Identities = 7/28 (25%), Positives = 19/28 (67%)
Frame = -2
Query: 420 ELCSSGCFPSTCSNLEAVTRACSREFVR 337
+ C + C P+TC++L + + C+++ ++
Sbjct: 42 QTCGTAC-PNTCADLNELQKPCTKQCIQ 68
>Y17704-1|CAA76824.2| 401|Anopheles gambiae hypothetical protein
protein.
Length = 401
Score = 24.2 bits (50), Expect = 2.6
Identities = 24/86 (27%), Positives = 37/86 (43%)
Frame = +2
Query: 59 QLRNKANEFLNSRKHANNLADILQMFEVETDNYTPLMLTIEVIFTELLKRGDLVQEIVPL 238
QL A+++ R +L +IL +ET+ L T+E + G E+V L
Sbjct: 309 QLLKWAHQYAPMRGGKAHLEEILPTLALETEK---LRRTVE-------QTGKSSAELVRL 358
Query: 239 KPAEQSPEAEYTRWLRECYETALARI 316
K E+ ++ RW Y T L I
Sbjct: 359 KKLEEKFVSKKDRWNTNTYRTYLHMI 384
>DQ370042-1|ABD18603.1| 194|Anopheles gambiae putative TIL domain
polypeptide protein.
Length = 194
Score = 23.8 bits (49), Expect = 3.5
Identities = 8/21 (38%), Positives = 14/21 (66%)
Frame = -2
Query: 414 CSSGCFPSTCSNLEAVTRACS 352
C + C P TC++L + +AC+
Sbjct: 44 CGTAC-PKTCADLNDLPKACT 63
>M93690-2|AAA29363.1| 1212|Anopheles gambiae unknown protein.
Length = 1212
Score = 22.6 bits (46), Expect = 8.1
Identities = 8/29 (27%), Positives = 17/29 (58%)
Frame = -1
Query: 133 HLQYISKIVRMFSGVKKLICFITKLSRNH 47
HL ++ + + + +K+ +T+L RNH
Sbjct: 807 HLSWLPHVREVTTRARKIADAVTRLLRNH 835
>AY928182-1|AAX22219.1| 335|Anopheles gambiae phenoloxidase
inhibitor protein protein.
Length = 335
Score = 22.6 bits (46), Expect = 8.1
Identities = 10/31 (32%), Positives = 13/31 (41%)
Frame = -2
Query: 420 ELCSSGCFPSTCSNLEAVTRACSREFVRPFI 328
+ CS C+ S CS E E RP +
Sbjct: 243 DCCSGACYKSVCST-EIRVGVLESELTRPSV 272
>AB090817-2|BAC57910.1| 1009|Anopheles gambiae reverse transcriptase
protein.
Length = 1009
Score = 22.6 bits (46), Expect = 8.1
Identities = 7/19 (36%), Positives = 14/19 (73%)
Frame = +1
Query: 151 QLYAANAYNRSNIHRTIKT 207
++ +AN YN S +H+ ++T
Sbjct: 955 EVMSANRYNWSMVHQAVRT 973
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 564,601
Number of Sequences: 2352
Number of extensions: 11996
Number of successful extensions: 18
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 46937349
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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