Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmov10j05
(688 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_UPI00015B40DC Cluster: PREDICTED: similar to conserved ... 153 3e-36
UniRef50_UPI0000DB781B Cluster: PREDICTED: similar to CG9300-PA;... 131 1e-29
UniRef50_Q17IH6 Cluster: Putative uncharacterized protein; n=1; ... 122 6e-27
UniRef50_Q9VW10 Cluster: CG9300-PA; n=2; Sophophora|Rep: CG9300-... 116 5e-25
UniRef50_Q7QIZ5 Cluster: ENSANGP00000018848; n=1; Anopheles gamb... 104 2e-21
UniRef50_Q4V9P9 Cluster: Nucleolar protein 11-like; n=2; Danio r... 69 8e-11
UniRef50_Q6INI5 Cluster: Nucleolar protein 11; n=5; cellular org... 64 4e-09
UniRef50_A7SCQ5 Cluster: Predicted protein; n=1; Nematostella ve... 59 1e-07
UniRef50_Q9H8H0 Cluster: Nucleolar protein 11; n=27; Amniota|Rep... 58 2e-07
UniRef50_Q4RZR2 Cluster: Chromosome 18 SCAF14786, whole genome s... 56 8e-07
UniRef50_Q22DJ2 Cluster: Putative uncharacterized protein; n=1; ... 36 1.2
UniRef50_Q8IAV2 Cluster: Putative uncharacterized protein PF08_0... 34 2.8
UniRef50_Q4UAS4 Cluster: SfiI-subtelomeric related protein famil... 34 3.7
UniRef50_A6LSE0 Cluster: Diguanylate cyclase; n=1; Clostridium b... 33 6.5
UniRef50_Q7QRS1 Cluster: GLP_260_9179_15133; n=1; Giardia lambli... 33 6.5
UniRef50_Q5CRS8 Cluster: Putative uncharacterized protein; n=2; ... 33 6.5
UniRef50_Q54YU4 Cluster: Putative uncharacterized protein; n=2; ... 33 6.5
UniRef50_Q1VS70 Cluster: Putative uncharacterized protein; n=2; ... 33 8.6
UniRef50_Q7RFF2 Cluster: S-adenosylmethionine decarboxylase-orni... 33 8.6
>UniRef50_UPI00015B40DC Cluster: PREDICTED: similar to conserved
hypothetical protein; n=1; Nasonia vitripennis|Rep:
PREDICTED: similar to conserved hypothetical protein -
Nasonia vitripennis
Length = 613
Score = 153 bits (372), Expect = 3e-36
Identities = 70/149 (46%), Positives = 93/149 (62%)
Frame = +1
Query: 175 MAKFHNYYVLCPLIDQKSFLGVSKDKEDANVLVTLGRNVVNKYRLSDQKQVGGWTSKDHI 354
MA+ +YY LCPLIDQ++ LGV D + +VTLG+N+V +Y+L D KQV W++KD +
Sbjct: 1 MARLSSYYTLCPLIDQQNLLGVENDSDPGCAIVTLGKNIVIRYKLQDTKQVSSWSTKDRL 60
Query: 355 TSAVIYDDTNGNYIGVFNNNIIKTWQEDSANLDKSKKFKFSLNIXXXXXXXXXXXXIIFS 534
T+ VIYDDT+ Y VFN I+TWQED NLD KKFKF I ++
Sbjct: 61 TTQVIYDDTSNKYAAVFNGKNIRTWQEDETNLDNVKKFKFPSPIHAILSFKGISPILVMQ 120
Query: 535 DGNCSSLSYAIENRKSFENKPVFKETETI 621
+G SL +AIENRK++ N + K ETI
Sbjct: 121 NGATVSLEWAIENRKTWSNPGILKPNETI 149
>UniRef50_UPI0000DB781B Cluster: PREDICTED: similar to CG9300-PA;
n=1; Apis mellifera|Rep: PREDICTED: similar to CG9300-PA
- Apis mellifera
Length = 392
Score = 131 bits (317), Expect = 1e-29
Identities = 59/151 (39%), Positives = 90/151 (59%)
Frame = +1
Query: 175 MAKFHNYYVLCPLIDQKSFLGVSKDKEDANVLVTLGRNVVNKYRLSDQKQVGGWTSKDHI 354
MAK ++YY LCPLID+++ LGV +D E +VTLGRN+V +Y+L D KQ+G WTSKD +
Sbjct: 1 MAKLYSYYTLCPLIDEQNLLGVERDSETGCAIVTLGRNIVIRYKLQDLKQLGSWTSKDRL 60
Query: 355 TSAVIYDDTNGNYIGVFNNNIIKTWQEDSANLDKSKKFKFSLNIXXXXXXXXXXXXIIFS 534
T+ VIY++ Y VFN I+ W + +L+ K +KF + ++
Sbjct: 61 TTQVIYNEITHQYAAVFNEKKIRLWSAEETDLNSIKGYKFQSALHTILTLEGCPPVLVRK 120
Query: 535 DGNCSSLSYAIENRKSFENKPVFKETETIVD 627
DG +SL AI+NRKS+ + + E +++
Sbjct: 121 DGATASLERAIQNRKSWSKEGILNINEKLLE 151
>UniRef50_Q17IH6 Cluster: Putative uncharacterized protein; n=1;
Aedes aegypti|Rep: Putative uncharacterized protein -
Aedes aegypti (Yellowfever mosquito)
Length = 711
Score = 122 bits (295), Expect = 6e-27
Identities = 56/141 (39%), Positives = 81/141 (57%)
Frame = +1
Query: 175 MAKFHNYYVLCPLIDQKSFLGVSKDKEDANVLVTLGRNVVNKYRLSDQKQVGGWTSKDHI 354
MAK +YY LCP+ D + FLG+S+D + V+ TLGRN++ +LS+QK WTS D +
Sbjct: 1 MAKLLSYYSLCPINDVREFLGLSRDVDTGCVINTLGRNIIQVVKLSNQKLQHSWTSLDRL 60
Query: 355 TSAVIYDDTNGNYIGVFNNNIIKTWQEDSANLDKSKKFKFSLNIXXXXXXXXXXXXIIFS 534
TS V+YD + Y+ VF N I++W D A+++K KK KF NI +++
Sbjct: 61 TSKVVYDFRSERYVAVFGNRQIRSWNRDQADINKVKKLKFFRNILELFTLDNGQVLVLYD 120
Query: 535 DGNCSSLSYAIENRKSFENKP 597
DG C SL A++ R P
Sbjct: 121 DGTCESLESAVDTRNDDRKDP 141
>UniRef50_Q9VW10 Cluster: CG9300-PA; n=2; Sophophora|Rep: CG9300-PA
- Drosophila melanogaster (Fruit fly)
Length = 673
Score = 116 bits (279), Expect = 5e-25
Identities = 55/135 (40%), Positives = 85/135 (62%)
Frame = +1
Query: 175 MAKFHNYYVLCPLIDQKSFLGVSKDKEDANVLVTLGRNVVNKYRLSDQKQVGGWTSKDHI 354
M+KF +YY L P+ D K FLG++ D+E+ NV+ TL RNVV +S QKQ+ W+ + +
Sbjct: 1 MSKFLSYYNLFPIPDPKEFLGLAADRENGNVVTTLARNVVVVLNISTQKQLLSWSLPEKL 60
Query: 355 TSAVIYDDTNGNYIGVFNNNIIKTWQEDSANLDKSKKFKFSLNIXXXXXXXXXXXXIIFS 534
+S VIYD ++ Y+GVF N+ ++ W D++++ K KK KF +I I++S
Sbjct: 61 SSKVIYDPSSQKYVGVFGNHALRLWDVDTSDVSKCKKLKFQKSI-AHVVATEQEALILYS 119
Query: 535 DGNCSSLSYAIENRK 579
DG C +LS A+ +RK
Sbjct: 120 DGECQTLSQALASRK 134
>UniRef50_Q7QIZ5 Cluster: ENSANGP00000018848; n=1; Anopheles gambiae
str. PEST|Rep: ENSANGP00000018848 - Anopheles gambiae
str. PEST
Length = 692
Score = 104 bits (250), Expect = 2e-21
Identities = 47/134 (35%), Positives = 77/134 (57%)
Frame = +1
Query: 175 MAKFHNYYVLCPLIDQKSFLGVSKDKEDANVLVTLGRNVVNKYRLSDQKQVGGWTSKDHI 354
MAK YY LCP+ + FLG+S+D + V+ TLGRN++ +LS+Q+Q+ WT D +
Sbjct: 1 MAKLLAYYNLCPINNIDDFLGLSRDVDPGCVINTLGRNIILVVKLSNQRQIRSWTVLDRL 60
Query: 355 TSAVIYDDTNGNYIGVFNNNIIKTWQEDSANLDKSKKFKFSLNIXXXXXXXXXXXXIIFS 534
+S V+YD + Y+GVF I+ W+ D +++ KK K + ++++
Sbjct: 61 SSKVVYDFRSERYVGVFGGRYIRCWKRDQHDMNTVKKIKLYRTVHDLFCLESGQTLLLYT 120
Query: 535 DGNCSSLSYAIENR 576
DG+C SL A++ R
Sbjct: 121 DGSCESLESALKTR 134
>UniRef50_Q4V9P9 Cluster: Nucleolar protein 11-like; n=2; Danio
rerio|Rep: Nucleolar protein 11-like - Danio rerio
(Zebrafish) (Brachydanio rerio)
Length = 708
Score = 69.3 bits (162), Expect = 8e-11
Identities = 38/129 (29%), Positives = 63/129 (48%), Gaps = 7/129 (5%)
Frame = +1
Query: 175 MAKFHNYYVLCPLIDQKS-----FLGVSKDKEDANVLVTLGRNVVNKYRLSDQKQVGGWT 339
MA + Y LC + K+ LG+ K+ +++VT V Y++SDQK G WT
Sbjct: 1 MATLYEEYTLCGVGPDKNSSSSGILGIELGKDVDHIIVTNSSRAVTVYKVSDQKPTGSWT 60
Query: 340 SKDH--ITSAVIYDDTNGNYIGVFNNNIIKTWQEDSANLDKSKKFKFSLNIXXXXXXXXX 513
K IT +Y+ + Y+ V +N +I+ W+ED N++K+ K S ++
Sbjct: 61 VKQGQLITCPAVYNTKSQEYVVVTDNKVIRVWKEDDVNMEKAFKATVSSDVLRVIAASDS 120
Query: 514 XXXIIFSDG 540
++FS G
Sbjct: 121 EPVVLFSCG 129
>UniRef50_Q6INI5 Cluster: Nucleolar protein 11; n=5; cellular
organisms|Rep: Nucleolar protein 11 - Xenopus laevis
(African clawed frog)
Length = 720
Score = 63.7 bits (148), Expect = 4e-09
Identities = 40/129 (31%), Positives = 61/129 (47%), Gaps = 7/129 (5%)
Frame = +1
Query: 175 MAKFHNYYVLCPLI----DQKS-FLGVSKDKEDANVLVTLGRNVVNKYRLSDQKQVGGWT 339
MA ++ LC L+ D KS LGV E VLVT V Y++SDQK G W
Sbjct: 1 MAALSEHFTLCGLLTGTDDGKSEILGVEPAGEPDRVLVTDSVQAVTLYKVSDQKPQGAWA 60
Query: 340 SKD--HITSAVIYDDTNGNYIGVFNNNIIKTWQEDSANLDKSKKFKFSLNIXXXXXXXXX 513
K IT + + +G +I V ++ +++ W+ED+ NLD + K S ++
Sbjct: 61 VKQGQSITCPAVLNPESGEFIVVHDDKVLRIWKEDNVNLDIAFKATLSADVCRIHTLPNT 120
Query: 514 XXXIIFSDG 540
++F G
Sbjct: 121 DPLVLFKGG 129
>UniRef50_A7SCQ5 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 640
Score = 58.8 bits (136), Expect = 1e-07
Identities = 39/145 (26%), Positives = 63/145 (43%), Gaps = 5/145 (3%)
Frame = +1
Query: 175 MAKFHNYYVLCPLIDQKSFLGVSKDKEDANVLVTLGRNVVNKYRLSDQKQVGGWTS--KD 348
MA Y LC + + + L V K E+ +V++T V Y L++ K V + K
Sbjct: 1 MAAIGETYALCRVFQRNNLLSVEKHCEENHVILTFKDRGVLVYNLANNKLVHSLAAQQKQ 60
Query: 349 HITSAVIYDDTNGNYIGVFNNNIIKTWQEDSANLDKSKKFKFS---LNIXXXXXXXXXXX 519
T V++D YIGV N+ I W EDS +L + F+ +I
Sbjct: 61 EFTCPVVHDPRTRKYIGVINDTKICQWSEDSVDLSDCQSFEVETAIASIKVSCGEVDHEP 120
Query: 520 XIIFSDGNCSSLSYAIENRKSFENK 594
++F DG S L+ + ++ + K
Sbjct: 121 LVVFVDGTVSFLNKCPQKSRNSKRK 145
>UniRef50_Q9H8H0 Cluster: Nucleolar protein 11; n=27; Amniota|Rep:
Nucleolar protein 11 - Homo sapiens (Human)
Length = 719
Score = 58.4 bits (135), Expect = 2e-07
Identities = 32/109 (29%), Positives = 53/109 (48%), Gaps = 3/109 (2%)
Frame = +1
Query: 223 KSFLGVSK-DKEDANVLVTLGRNVVNKYRLSDQKQVGGWTSKDH--ITSAVIYDDTNGNY 393
+ LGV + DK D ++ GR V+ Y++SDQK +G W+ K IT + + G Y
Sbjct: 20 EGLLGVEQSDKTDQFLVTDSGRTVI-LYKVSDQKPLGSWSVKQGQIITCPAVCNFQTGEY 78
Query: 394 IGVFNNNIIKTWQEDSANLDKSKKFKFSLNIXXXXXXXXXXXXIIFSDG 540
+ V +N +++ W + NLDK K S + ++F +G
Sbjct: 79 VVVHDNKVLRIWNNEDVNLDKVFKATLSAEVYRILSVQGTEPLVLFKEG 127
>UniRef50_Q4RZR2 Cluster: Chromosome 18 SCAF14786, whole genome
shotgun sequence; n=2; Tetraodontidae|Rep: Chromosome 18
SCAF14786, whole genome shotgun sequence - Tetraodon
nigroviridis (Green puffer)
Length = 671
Score = 56.0 bits (129), Expect = 8e-07
Identities = 33/138 (23%), Positives = 60/138 (43%), Gaps = 7/138 (5%)
Frame = +1
Query: 175 MAKFHNYYVLCPLIDQKSFL-----GVSKDKEDANVLVTLGRNVVNKYRLSDQKQVGGWT 339
MA + Y LC + +S G+ +++ +V+VT V Y++SDQK + WT
Sbjct: 1 MAALYEGYTLCGRVSGQSLSDSGIRGIEVERDGDHVIVTDSSRSVTLYKVSDQKPLSTWT 60
Query: 340 SK--DHITSAVIYDDTNGNYIGVFNNNIIKTWQEDSANLDKSKKFKFSLNIXXXXXXXXX 513
K + +Y+ Y+ V ++ +++ W+E+ L+K K S I
Sbjct: 61 VKQGQSFSCPAVYNSQTKEYVAVSDSKVVRIWKEEDMLLEKVFKATVSSEIWRVHSVPGG 120
Query: 514 XXXIIFSDGNCSSLSYAI 567
++F G L Y +
Sbjct: 121 EPVVLFKSGAVRLLDYLL 138
>UniRef50_Q22DJ2 Cluster: Putative uncharacterized protein; n=1;
Tetrahymena thermophila SB210|Rep: Putative
uncharacterized protein - Tetrahymena thermophila SB210
Length = 595
Score = 35.5 bits (78), Expect = 1.2
Identities = 40/150 (26%), Positives = 65/150 (43%), Gaps = 4/150 (2%)
Frame = +1
Query: 16 NKHIRMRCCRHYFIIFLQHRNKYIHT*LCIL----IIKQHLCALPMVEHIDIET*RTMAK 183
NK+ C YF+ Q+ + Y +T C + + +L ++ D+ET + K
Sbjct: 148 NKYANKGCDSFYFVS--QYDSLYYYT--CTVHGSGTVDNYLWKASSLQ--DLETATSKVK 201
Query: 184 FHNYYVLCPLIDQKSFLGVSKDKEDANVLVTLGRNVVNKYRLSDQKQVGGWTSKDHITSA 363
F+N I L V K KE N L + + S + +G +KD I S
Sbjct: 202 FNNQLFKKTYIVFDETLLVYKGKEYTNFLSITTTMTGSTFDCSKKYDLGLNPTKDCIISK 261
Query: 364 VIYDDTNGNYIGVFNNNIIKTWQEDSANLD 453
V ++NGNY+ + +N T+ SA L+
Sbjct: 262 VF--NSNGNYVYIQSNLYSITYDSQSAKLN 289
>UniRef50_Q8IAV2 Cluster: Putative uncharacterized protein
PF08_0090; n=1; Plasmodium falciparum 3D7|Rep: Putative
uncharacterized protein PF08_0090 - Plasmodium
falciparum (isolate 3D7)
Length = 1222
Score = 34.3 bits (75), Expect = 2.8
Identities = 15/56 (26%), Positives = 31/56 (55%)
Frame = +1
Query: 250 KEDANVLVTLGRNVVNKYRLSDQKQVGGWTSKDHITSAVIYDDTNGNYIGVFNNNI 417
K ++ L L ++KY L D+ +G T+ ++I +++ N NY ++N+N+
Sbjct: 674 KSQSSYLFMLYLICISKYGLDDKSIIGHTTNLNNINILYSHNNNNNNYNNIYNDNL 729
>UniRef50_Q4UAS4 Cluster: SfiI-subtelomeric related protein family
member, putative; n=1; Theileria annulata|Rep:
SfiI-subtelomeric related protein family member,
putative - Theileria annulata
Length = 988
Score = 33.9 bits (74), Expect = 3.7
Identities = 20/70 (28%), Positives = 32/70 (45%), Gaps = 3/70 (4%)
Frame = +1
Query: 247 DKEDANVLVTLGRNVVNKYRLSDQKQVGGWTSKDHI--TSAVIYDDTNGNYIGV-FNNNI 417
D D N +VT N + Q + W SKD++ T + D + Y+ + NN+
Sbjct: 254 DYTDRNGIVTYTAKSDNLFDKVSQGTIVVWESKDYVYGTLVRVMSDESKKYLAILLTNNM 313
Query: 418 IKTWQEDSAN 447
K + ED+ N
Sbjct: 314 FKVFHEDAGN 323
>UniRef50_A6LSE0 Cluster: Diguanylate cyclase; n=1; Clostridium
beijerinckii NCIMB 8052|Rep: Diguanylate cyclase -
Clostridium beijerinckii NCIMB 8052
Length = 633
Score = 33.1 bits (72), Expect = 6.5
Identities = 20/82 (24%), Positives = 40/82 (48%), Gaps = 2/82 (2%)
Frame = +1
Query: 247 DKEDANVLVTLGRNVVNKYR--LSDQKQVGGWTSKDHITSAVIYDDTNGNYIGVFNNNII 420
+ EDA ++ +N+++ Y+ + D+++ T+ D + ++ +FN+NI
Sbjct: 508 NSEDAGAIMEQIKNIISDYKFEIGDKEEETEETALD----VEVIKESMFKSEKLFNSNIF 563
Query: 421 KTWQEDSANLDKSKKFKFSLNI 486
K W + L KSK + NI
Sbjct: 564 KKWISEKVGLSKSKSISNTFNI 585
>UniRef50_Q7QRS1 Cluster: GLP_260_9179_15133; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_260_9179_15133 - Giardia lamblia
ATCC 50803
Length = 1984
Score = 33.1 bits (72), Expect = 6.5
Identities = 19/55 (34%), Positives = 32/55 (58%), Gaps = 1/55 (1%)
Frame = +2
Query: 41 VDIILLFSFN-IEISTYIHNYAF**LNNIYVHYLWLNILILKRKEPWQNFIITMF 202
+D+ LLF F + TY Y LNN+ +HY LN +++K ++ Q II+++
Sbjct: 71 LDLKLLFRFQGLSQRTYEAGYQVTALNNVDLHYPGLNKVLIKYRKVQQASIISLY 125
>UniRef50_Q5CRS8 Cluster: Putative uncharacterized protein; n=2;
Cryptosporidium|Rep: Putative uncharacterized protein -
Cryptosporidium parvum Iowa II
Length = 924
Score = 33.1 bits (72), Expect = 6.5
Identities = 22/69 (31%), Positives = 33/69 (47%)
Frame = +1
Query: 253 EDANVLVTLGRNVVNKYRLSDQKQVGGWTSKDHITSAVIYDDTNGNYIGVFNNNIIKTWQ 432
E+ N + GRN NK RL + + S HIT++ I ++ N + + N I T+Q
Sbjct: 666 EEINHDIFEGRNRTNKKRLRKKSLISDEISDKHITNS-IDENCNTEFKLLLNETIPATYQ 724
Query: 433 EDSANLDKS 459
E L S
Sbjct: 725 ESERKLGTS 733
>UniRef50_Q54YU4 Cluster: Putative uncharacterized protein; n=2;
Dictyostelium discoideum AX4|Rep: Putative
uncharacterized protein - Dictyostelium discoideum AX4
Length = 718
Score = 33.1 bits (72), Expect = 6.5
Identities = 18/42 (42%), Positives = 25/42 (59%), Gaps = 1/42 (2%)
Frame = +1
Query: 523 IIFSDGNCSSLSYAIENRKSFENKPVFKETETIVDI-SYYGK 645
II DG+CSS + I N+K N P +K E V++ +Y GK
Sbjct: 588 IINEDGSCSSSTNKISNKKYKSNIPEYKLEEMKVEVANYIGK 629
>UniRef50_Q1VS70 Cluster: Putative uncharacterized protein; n=2;
Bacteria|Rep: Putative uncharacterized protein -
Psychroflexus torquis ATCC 700755
Length = 390
Score = 32.7 bits (71), Expect = 8.6
Identities = 19/57 (33%), Positives = 30/57 (52%)
Frame = +1
Query: 262 NVLVTLGRNVVNKYRLSDQKQVGGWTSKDHITSAVIYDDTNGNYIGVFNNNIIKTWQ 432
NVL T+ RN +K R+ D+ WT +I + +G YIG NN++I ++
Sbjct: 229 NVLTTINRN--DKIRIIDKLTYNSWTK-------IIVEADDGFYIGFLNNSLISDYK 276
>UniRef50_Q7RFF2 Cluster: S-adenosylmethionine
decarboxylase-ornithine decarboxylase-related; n=6;
Plasmodium (Vinckeia)|Rep: S-adenosylmethionine
decarboxylase-ornithine decarboxylase-related -
Plasmodium yoelii yoelii
Length = 1404
Score = 32.7 bits (71), Expect = 8.6
Identities = 23/80 (28%), Positives = 36/80 (45%), Gaps = 3/80 (3%)
Frame = +1
Query: 214 IDQKSFLGVSKDKEDANVLVTLGRNVVNKYRLSDQKQV-GGWTSK--DHITSAVIYDDTN 384
ID S + +D V++T + N SD K + G SK D + V DD N
Sbjct: 302 IDNNSINTLYNTVDDQTVILTCSDDKNNNLNESDSKLLLAGENSKNMDKDNTQVFNDDNN 361
Query: 385 GNYIGVFNNNIIKTWQEDSA 444
NYI + N + +T+ ++
Sbjct: 362 NNYIFISNPKVQETYSNTNS 381
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 637,736,598
Number of Sequences: 1657284
Number of extensions: 12636397
Number of successful extensions: 32833
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 31214
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 32802
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 53719013270
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -