Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmov10j05
         (688 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ103706-1|AAZ43087.1|  344|Anopheles gambiae pk-1 receptor prot...    25   3.0  
CR954257-14|CAJ14165.1| 1726|Anopheles gambiae BEL12_AG transpos...    23   9.0  

>DQ103706-1|AAZ43087.1|  344|Anopheles gambiae pk-1 receptor
           protein.
          Length = 344

 Score = 24.6 bits (51), Expect = 3.0
 Identities = 12/36 (33%), Positives = 18/36 (50%), Gaps = 3/36 (8%)
 Frame = -3

Query: 173 VLYVSISICSTIGNAHKCCLIIK---MHNYVCMYLF 75
           ++Y+ I I   +GN   C +I +   MH     YLF
Sbjct: 50  IIYLLIFITGVVGNISTCIVIARNRSMHTATNYYLF 85


>CR954257-14|CAJ14165.1| 1726|Anopheles gambiae BEL12_AG transposon
           polyprotein protein.
          Length = 1726

 Score = 23.0 bits (47), Expect = 9.0
 Identities = 11/50 (22%), Positives = 22/50 (44%)
 Frame = +1

Query: 250 KEDANVLVTLGRNVVNKYRLSDQKQVGGWTSKDHITSAVIYDDTNGNYIG 399
           ++  N+L +  +N+ N+Y  +     G    +D    A+    TN  + G
Sbjct: 291 EQRVNILKSSAQNICNQYSANSIMVTGRQARRDGRNVALPVQQTNNTFKG 340


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 698,479
Number of Sequences: 2352
Number of extensions: 14400
Number of successful extensions: 30
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 30
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 30
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 69413730
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)