Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmov10j05
         (688 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC064404-1|AAH64404.1|  719|Homo sapiens nucleolar protein 11 pr...    58   2e-08
AY598333-1|AAT06744.1|  719|Homo sapiens L14 protein.                  58   2e-08
AK023702-1|BAB14647.1|  719|Homo sapiens protein ( Homo sapiens ...    58   2e-08

>BC064404-1|AAH64404.1|  719|Homo sapiens nucleolar protein 11
           protein.
          Length = 719

 Score = 58.4 bits (135), Expect = 2e-08
 Identities = 32/109 (29%), Positives = 53/109 (48%), Gaps = 3/109 (2%)
 Frame = +1

Query: 223 KSFLGVSK-DKEDANVLVTLGRNVVNKYRLSDQKQVGGWTSKDH--ITSAVIYDDTNGNY 393
           +  LGV + DK D  ++   GR V+  Y++SDQK +G W+ K    IT   + +   G Y
Sbjct: 20  EGLLGVEQSDKTDQFLVTDSGRTVI-LYKVSDQKPLGSWSVKQGQIITCPAVCNFQTGEY 78

Query: 394 IGVFNNNIIKTWQEDSANLDKSKKFKFSLNIXXXXXXXXXXXXIIFSDG 540
           + V +N +++ W  +  NLDK  K   S  +            ++F +G
Sbjct: 79  VVVHDNKVLRIWNNEDVNLDKVFKATLSAEVYRILSVQGTEPLVLFKEG 127


>AY598333-1|AAT06744.1|  719|Homo sapiens L14 protein.
          Length = 719

 Score = 58.4 bits (135), Expect = 2e-08
 Identities = 32/109 (29%), Positives = 53/109 (48%), Gaps = 3/109 (2%)
 Frame = +1

Query: 223 KSFLGVSK-DKEDANVLVTLGRNVVNKYRLSDQKQVGGWTSKDH--ITSAVIYDDTNGNY 393
           +  LGV + DK D  ++   GR V+  Y++SDQK +G W+ K    IT   + +   G Y
Sbjct: 20  EGLLGVEQSDKTDQFLVTDSGRTVI-LYKVSDQKPLGSWSVKQGQIITCPAVCNFQTGEY 78

Query: 394 IGVFNNNIIKTWQEDSANLDKSKKFKFSLNIXXXXXXXXXXXXIIFSDG 540
           + V +N +++ W  +  NLDK  K   S  +            ++F +G
Sbjct: 79  VVVHDNKVLRIWNNEDVNLDKVFKATLSAEVYRILSVQGTEPLVLFKEG 127


>AK023702-1|BAB14647.1|  719|Homo sapiens protein ( Homo sapiens
           cDNA FLJ13640 fis, clone PLACE1011221. ).
          Length = 719

 Score = 58.4 bits (135), Expect = 2e-08
 Identities = 32/109 (29%), Positives = 53/109 (48%), Gaps = 3/109 (2%)
 Frame = +1

Query: 223 KSFLGVSK-DKEDANVLVTLGRNVVNKYRLSDQKQVGGWTSKDH--ITSAVIYDDTNGNY 393
           +  LGV + DK D  ++   GR V+  Y++SDQK +G W+ K    IT   + +   G Y
Sbjct: 20  EGLLGVEQSDKTDQFLVTDSGRTVI-LYKVSDQKPLGSWSVKQGQIITCPAVCNFQTGEY 78

Query: 394 IGVFNNNIIKTWQEDSANLDKSKKFKFSLNIXXXXXXXXXXXXIIFSDG 540
           + V +N +++ W  +  NLDK  K   S  +            ++F +G
Sbjct: 79  VVVHDNKVLRIWNNEDVNLDKVFKATLSAEVYRILSVQGTEPLVLFKEG 127


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 91,529,128
Number of Sequences: 237096
Number of extensions: 1759559
Number of successful extensions: 2876
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 2811
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2873
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 7839245960
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)