Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmov10j05
         (688 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AC199169-12|ABO33253.1|  478|Caenorhabditis elegans Hypothetical...    30   1.3  
AC006663-5|AAY43999.1|  490|Caenorhabditis elegans Hypothetical ...    30   1.3  
U29244-12|AAC71093.3|  604|Caenorhabditis elegans Hypothetical p...    29   4.1  
AF099915-1|AAC68771.1|  460|Caenorhabditis elegans Hypothetical ...    29   4.1  
Z32680-2|CAA83597.1| 1218|Caenorhabditis elegans Hypothetical pr...    28   5.4  
U41263-6|AAC24432.1|  338|Caenorhabditis elegans Serpentine rece...    28   5.4  
AC024876-6|AAS80337.1|  181|Caenorhabditis elegans Hypothetical ...    28   7.2  

>AC199169-12|ABO33253.1|  478|Caenorhabditis elegans Hypothetical
           protein F38A1.14 protein.
          Length = 478

 Score = 30.3 bits (65), Expect = 1.3
 Identities = 16/37 (43%), Positives = 21/37 (56%)
 Frame = -3

Query: 536 SENIINGDLFFLGSSFRMFSENLNFFDLSKLAESSCH 426
           SE ++N D  F GS F  +S+ LNF D    A + CH
Sbjct: 17  SECMVNSDKEFEGSCFTFYSQQLNFTD----ARNWCH 49


>AC006663-5|AAY43999.1|  490|Caenorhabditis elegans Hypothetical
           protein H24K24.2 protein.
          Length = 490

 Score = 30.3 bits (65), Expect = 1.3
 Identities = 12/29 (41%), Positives = 21/29 (72%)
 Frame = -1

Query: 385 HLCHHRSQLKLYDLSMSNLRLVSGLKVCI 299
           HLC   S L++ D+S +N+R +SG+K+ +
Sbjct: 143 HLCIGFSNLRVLDISNTNIRNLSGMKMLV 171


>U29244-12|AAC71093.3|  604|Caenorhabditis elegans Hypothetical
           protein ZK1248.13 protein.
          Length = 604

 Score = 28.7 bits (61), Expect = 4.1
 Identities = 17/42 (40%), Positives = 24/42 (57%), Gaps = 2/42 (4%)
 Frame = -3

Query: 530 NIIN-GDLFFLGSSFRMFSENLNFFD-LSKLAESSCHVLIML 411
           N+ N  D F+L S  RM  EN+N F  +S  +E +C +  ML
Sbjct: 354 NVTNFADAFWLASRGRMSKENMNIFSWISTKSEFTCKLEHML 395


>AF099915-1|AAC68771.1|  460|Caenorhabditis elegans Hypothetical
           protein E02H9.6 protein.
          Length = 460

 Score = 28.7 bits (61), Expect = 4.1
 Identities = 20/72 (27%), Positives = 37/72 (51%), Gaps = 1/72 (1%)
 Frame = +1

Query: 55  IIFLQHRNKYIHT*LCILIIKQHLCALPMVEHIDIET*RTMAKFHNYYVLCPLIDQK-SF 231
           I F  H  +Y+      + I   LCA+P++  I+++  RT+     Y +LC +  +K  +
Sbjct: 333 IFFRHHTIRYLLQNPIYIQIPTLLCAIPLINGINLQ--RTVYSKIIYNLLCSIYHKKDKY 390

Query: 232 LGVSKDKEDANV 267
           L  +K+ E  N+
Sbjct: 391 LKETKNLELKNL 402


>Z32680-2|CAA83597.1| 1218|Caenorhabditis elegans Hypothetical protein
            C28A5.2 protein.
          Length = 1218

 Score = 28.3 bits (60), Expect = 5.4
 Identities = 26/130 (20%), Positives = 49/130 (37%), Gaps = 13/130 (10%)
 Frame = +1

Query: 319  KQVGGWTSKDHITSAVIYDDTNGNYIGVFNNN--IIKTWQE-DSANLDKSKKF------- 468
            +Q+   T  + +   +IY++ N   + V  N   I+K W     A + ++KK        
Sbjct: 751  RQIRNITPHNVLLRDIIYNNINNRKMFVEQNKNAILKCWNRLPLAQVTRTKKIFCTVIAV 810

Query: 469  ---KFSLNIXXXXXXXXXXXXIIFSDGNCSSLSYAIENRKSFENKPVFKETETIVDISYY 639
               KF  +             +++ D N  + S  +    +F N P   +      + ++
Sbjct: 811  ESIKFPPSFDDTCIKGLVRFAVVYDDMNVKNTSVVVPIGGNFNNLPKSFQLGDAYKVFHF 870

Query: 640  GKYSDCICYI 669
              Y D IC I
Sbjct: 871  SSYKDLICRI 880


>U41263-6|AAC24432.1|  338|Caenorhabditis elegans Serpentine
           receptor, class a (alpha)protein 26 protein.
          Length = 338

 Score = 28.3 bits (60), Expect = 5.4
 Identities = 12/37 (32%), Positives = 22/37 (59%)
 Frame = +2

Query: 542 IVHHYLMQLRTVKVLKTNLFSKKPKPLLIYLTMENIV 652
           I+ +Y   L    ++K N+FS   + LLI+ ++ +IV
Sbjct: 39  IISYYFFYLVVKTLIKNNIFSNCTRALLIFCSINSIV 75


>AC024876-6|AAS80337.1|  181|Caenorhabditis elegans Hypothetical
           protein Y94H6A.10 protein.
          Length = 181

 Score = 27.9 bits (59), Expect = 7.2
 Identities = 11/25 (44%), Positives = 15/25 (60%)
 Frame = +1

Query: 304 RLSDQKQVGGWTSKDHITSAVIYDD 378
           +L+ Q Q  GW  + HITS + Y D
Sbjct: 52  KLTTQMQKQGWECEAHITSFIFYKD 76


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,570,336
Number of Sequences: 27780
Number of extensions: 327940
Number of successful extensions: 937
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 914
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 937
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1571291122
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)