Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmov10j04
(668 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U80447-3|AAB37807.2| 910|Caenorhabditis elegans Hypothetical pr... 122 2e-28
AL110501-4|CAB54510.1| 368|Caenorhabditis elegans Hypothetical ... 32 0.42
Z92822-8|CAL49447.1| 1383|Caenorhabditis elegans Hypothetical pr... 31 0.74
Z82094-4|CAL49445.1| 1383|Caenorhabditis elegans Hypothetical pr... 31 0.74
DQ314286-1|ABC42046.1| 1383|Caenorhabditis elegans DYF-2 protein. 31 0.74
AC024867-3|AAK68601.2| 327|Caenorhabditis elegans Eukaryotic in... 31 0.74
U41020-2|AAA82332.3| 1732|Caenorhabditis elegans Osmotic avoidan... 30 1.3
U21322-6|AAN65314.2| 669|Caenorhabditis elegans Hypothetical pr... 30 1.3
U21322-5|AAA62539.1| 1223|Caenorhabditis elegans Hypothetical pr... 30 1.3
DQ360811-1|ABC88648.1| 1737|Caenorhabditis elegans intraflagella... 30 1.3
Z70756-3|CAC42337.1| 2514|Caenorhabditis elegans Hypothetical pr... 29 2.3
Z70756-2|CAA94790.2| 2531|Caenorhabditis elegans Hypothetical pr... 29 2.3
AB018598-1|BAA33886.1| 2514|Caenorhabditis elegans ATM-like prot... 29 2.3
AL021492-3|CAA16382.3| 893|Caenorhabditis elegans Hypothetical ... 29 3.9
Z66521-4|CAD59160.1| 150|Caenorhabditis elegans Hypothetical pr... 28 5.2
Z66521-3|CAD59159.1| 148|Caenorhabditis elegans Hypothetical pr... 28 5.2
Z66521-2|CAA91395.1| 312|Caenorhabditis elegans Hypothetical pr... 28 5.2
Z81494-11|CAN99681.1| 455|Caenorhabditis elegans Hypothetical p... 27 9.1
Z81494-6|CAC42275.1| 451|Caenorhabditis elegans Hypothetical pr... 27 9.1
Z69664-1|CAA93514.1| 325|Caenorhabditis elegans Hypothetical pr... 27 9.1
AF022978-4|AAG24178.1| 383|Caenorhabditis elegans Hypothetical ... 27 9.1
>U80447-3|AAB37807.2| 910|Caenorhabditis elegans Hypothetical
protein F55F8.3 protein.
Length = 910
Score = 122 bits (295), Expect = 2e-28
Identities = 56/161 (34%), Positives = 94/161 (58%), Gaps = 1/161 (0%)
Frame = +3
Query: 171 MKFNYKFQNLLGTVYRKGDVLFSKDGNCVISPVGNRITIYNLKQNKSNTLSFESHYNYTA 350
M N+K N +GTVYR G V FSKDG VISP+GN+++I++L+ N S TL + +YN
Sbjct: 1 MDTNFKLSNCIGTVYRDGQVAFSKDGYSVISPIGNKLSIFDLRNNTSKTLDIDCNYNIKR 60
Query: 351 VDIAPNGMTLLAVTEKGEAQIISLTTSVVLHKYKFKQQVNAVKFSPDGKYFAVCCDNTVF 530
+ I+P+G LLA E+G + L + ++ ++ + + ++++SPD A+C +N +
Sbjct: 61 LSISPSGYHLLASDERGVVHFVHLLSEFKIYTFRSNKPIGSLQWSPDATRVAICRENDLQ 120
Query: 531 VMTAPVHFTGE-YRPFIMKRVFKKALDEVTCLDWSSCSRLL 650
+ + Y PF + R +K + D + +DWS + LL
Sbjct: 121 IHEFGKSIENKVYNPFSLSRTYKLSSDSLKTIDWSDDANLL 161
>AL110501-4|CAB54510.1| 368|Caenorhabditis elegans Hypothetical
protein Y79H2A.6 protein.
Length = 368
Score = 31.9 bits (69), Expect = 0.42
Identities = 21/68 (30%), Positives = 34/68 (50%)
Frame = +3
Query: 450 KFKQQVNAVKFSPDGKYFAVCCDNTVFVMTAPVHFTGEYRPFIMKRVFKKALDEVTCLDW 629
+F + VK+SP FAV + + + ++ E ++ K++ K VTCLDW
Sbjct: 100 RFNRAATYVKWSPLENKFAV---GSGAKLVSVCYYEKENDWWVSKQIKKPIRSTVTCLDW 156
Query: 630 SSCSRLLA 653
S + LLA
Sbjct: 157 HSNNVLLA 164
>Z92822-8|CAL49447.1| 1383|Caenorhabditis elegans Hypothetical
protein ZK520.3a protein.
Length = 1383
Score = 31.1 bits (67), Expect = 0.74
Identities = 28/111 (25%), Positives = 48/111 (43%), Gaps = 6/111 (5%)
Frame = +3
Query: 225 DVLFSKDGNCVISPVGNRITIYNLKQNKSNTLSFESHYNY-----TAVDIAPNGMTLLAV 389
D+ + K+G+ + V N TIY N NT + ES T + +P+ TL+
Sbjct: 79 DIAWDKEGDVLAIAVANTGTIYLWDVNSRNTDTVESGATSSKELPTCLAWSPSTPTLVIG 138
Query: 390 TEKGEAQIISLTTS-VVLHKYKFKQQVNAVKFSPDGKYFAVCCDNTVFVMT 539
G + + TS + K ++ V + +P+ + DNT+ V T
Sbjct: 139 NNAGNIVVYNHRTSRRIAVMGKHQRSVTQITVTPEDYVISCSDDNTLSVTT 189
>Z82094-4|CAL49445.1| 1383|Caenorhabditis elegans Hypothetical
protein ZK520.3a protein.
Length = 1383
Score = 31.1 bits (67), Expect = 0.74
Identities = 28/111 (25%), Positives = 48/111 (43%), Gaps = 6/111 (5%)
Frame = +3
Query: 225 DVLFSKDGNCVISPVGNRITIYNLKQNKSNTLSFESHYNY-----TAVDIAPNGMTLLAV 389
D+ + K+G+ + V N TIY N NT + ES T + +P+ TL+
Sbjct: 79 DIAWDKEGDVLAIAVANTGTIYLWDVNSRNTDTVESGATSSKELPTCLAWSPSTPTLVIG 138
Query: 390 TEKGEAQIISLTTS-VVLHKYKFKQQVNAVKFSPDGKYFAVCCDNTVFVMT 539
G + + TS + K ++ V + +P+ + DNT+ V T
Sbjct: 139 NNAGNIVVYNHRTSRRIAVMGKHQRSVTQITVTPEDYVISCSDDNTLSVTT 189
>DQ314286-1|ABC42046.1| 1383|Caenorhabditis elegans DYF-2 protein.
Length = 1383
Score = 31.1 bits (67), Expect = 0.74
Identities = 28/111 (25%), Positives = 48/111 (43%), Gaps = 6/111 (5%)
Frame = +3
Query: 225 DVLFSKDGNCVISPVGNRITIYNLKQNKSNTLSFESHYNY-----TAVDIAPNGMTLLAV 389
D+ + K+G+ + V N TIY N NT + ES T + +P+ TL+
Sbjct: 79 DIAWDKEGDVLAIAVANTGTIYLWDVNSRNTDTVESGATSSKELPTCLAWSPSTPTLVIG 138
Query: 390 TEKGEAQIISLTTS-VVLHKYKFKQQVNAVKFSPDGKYFAVCCDNTVFVMT 539
G + + TS + K ++ V + +P+ + DNT+ V T
Sbjct: 139 NNAGNIVVYNHRTSRRIAVMGKHQRSVTQITVTPEDYVISCSDDNTLSVTT 189
>AC024867-3|AAK68601.2| 327|Caenorhabditis elegans Eukaryotic
initiation factor protein3.I protein.
Length = 327
Score = 31.1 bits (67), Expect = 0.74
Identities = 22/106 (20%), Positives = 47/106 (44%), Gaps = 2/106 (1%)
Frame = +3
Query: 288 YNLKQNKSNTLSFESHYNYTAVDI--APNGMTLLAVTEKGEAQIISLTTSVVLHKYKFKQ 461
Y+L+ + + ES + Y+ D+ +P G L++ + A ++ + L +YK ++
Sbjct: 173 YDLRNPDTPIHTNESVHRYSVQDLQLSPRGDFLISASRDKTAALLDVNDLKKLKQYKSER 232
Query: 462 QVNAVKFSPDGKYFAVCCDNTVFVMTAPVHFTGEYRPFIMKRVFKK 599
VN+ SP+ + + +T G + I VF++
Sbjct: 233 PVNSACISPNRDHICLGGGEDAMQVTQTSVSAGHFEAKIYHMVFEE 278
>U41020-2|AAA82332.3| 1732|Caenorhabditis elegans Osmotic avoidance
abnormal protein1 protein.
Length = 1732
Score = 30.3 bits (65), Expect = 1.3
Identities = 26/97 (26%), Positives = 43/97 (44%), Gaps = 2/97 (2%)
Frame = +3
Query: 381 LAVTEKGEAQIISLTTSVVLHKYKFKQ-QVNAVKFSPDGKYFAVC-CDNTVFVMTAPVHF 554
+A+ ++ Q T + KY K V + FSPD A+ DN +F+ +
Sbjct: 40 VALLDENGVQKDRFTCKPIDAKYGKKSFTVLCMTFSPDSSRIAIGQSDNVLFIYKVGTSW 99
Query: 555 TGEYRPFIMKRVFKKALDEVTCLDWSSCSRLLAGRIE 665
E + + K V A VTCL W ++L G+++
Sbjct: 100 N-EKKVIVNKFVQPSA---VTCLSWPFDDKILVGQLD 132
>U21322-6|AAN65314.2| 669|Caenorhabditis elegans Hypothetical
protein K10D2.1b protein.
Length = 669
Score = 30.3 bits (65), Expect = 1.3
Identities = 13/34 (38%), Positives = 22/34 (64%)
Frame = +3
Query: 336 YNYTAVDIAPNGMTLLAVTEKGEAQIISLTTSVV 437
+N+T +D A G LLA ++ G ++I L+ SV+
Sbjct: 326 FNHTVMDFAWCGRNLLACSQDGTVKVIHLSESVI 359
>U21322-5|AAA62539.1| 1223|Caenorhabditis elegans Hypothetical
protein K10D2.1a protein.
Length = 1223
Score = 30.3 bits (65), Expect = 1.3
Identities = 13/34 (38%), Positives = 22/34 (64%)
Frame = +3
Query: 336 YNYTAVDIAPNGMTLLAVTEKGEAQIISLTTSVV 437
+N+T +D A G LLA ++ G ++I L+ SV+
Sbjct: 614 FNHTVMDFAWCGRNLLACSQDGTVKVIHLSESVI 647
>DQ360811-1|ABC88648.1| 1737|Caenorhabditis elegans intraflagellar
transport protein protein.
Length = 1737
Score = 30.3 bits (65), Expect = 1.3
Identities = 26/97 (26%), Positives = 43/97 (44%), Gaps = 2/97 (2%)
Frame = +3
Query: 381 LAVTEKGEAQIISLTTSVVLHKYKFKQ-QVNAVKFSPDGKYFAVC-CDNTVFVMTAPVHF 554
+A+ ++ Q T + KY K V + FSPD A+ DN +F+ +
Sbjct: 40 VALLDENGVQKDRFTCKPIDAKYGKKSFTVLCMTFSPDSSRIAIGQSDNVLFIYKVGTSW 99
Query: 555 TGEYRPFIMKRVFKKALDEVTCLDWSSCSRLLAGRIE 665
E + + K V A VTCL W ++L G+++
Sbjct: 100 N-EKKVIVNKFVQPSA---VTCLSWPFDDKILVGQLD 132
>Z70756-3|CAC42337.1| 2514|Caenorhabditis elegans Hypothetical protein
T06E4.3b protein.
Length = 2514
Score = 29.5 bits (63), Expect = 2.3
Identities = 11/30 (36%), Positives = 18/30 (60%)
Frame = +3
Query: 555 TGEYRPFIMKRVFKKALDEVTCLDWSSCSR 644
TG+ +PF +K +DE+ CL++S R
Sbjct: 1585 TGKGKPFNSTEAIQKLIDELNCLEYSQIER 1614
>Z70756-2|CAA94790.2| 2531|Caenorhabditis elegans Hypothetical protein
T06E4.3a protein.
Length = 2531
Score = 29.5 bits (63), Expect = 2.3
Identities = 11/30 (36%), Positives = 18/30 (60%)
Frame = +3
Query: 555 TGEYRPFIMKRVFKKALDEVTCLDWSSCSR 644
TG+ +PF +K +DE+ CL++S R
Sbjct: 1585 TGKGKPFNSTEAIQKLIDELNCLEYSQIER 1614
>AB018598-1|BAA33886.1| 2514|Caenorhabditis elegans ATM-like protein
protein.
Length = 2514
Score = 29.5 bits (63), Expect = 2.3
Identities = 11/30 (36%), Positives = 18/30 (60%)
Frame = +3
Query: 555 TGEYRPFIMKRVFKKALDEVTCLDWSSCSR 644
TG+ +PF +K +DE+ CL++S R
Sbjct: 1585 TGKGKPFNSTEAIQKLIDELNCLEYSQIER 1614
>AL021492-3|CAA16382.3| 893|Caenorhabditis elegans Hypothetical
protein Y45F10D.7 protein.
Length = 893
Score = 28.7 bits (61), Expect = 3.9
Identities = 18/57 (31%), Positives = 30/57 (52%), Gaps = 3/57 (5%)
Frame = +3
Query: 372 MTLLAVTEKGEAQIISLTTSVVLHKYKFK---QQVNAVKFSPDGKYFAVCCDNTVFV 533
+ L+A+ E G+ +I + T F+ +VNA+ FS DGK+ V DN ++
Sbjct: 525 VALVAIAENGKESVILVDTVCHRVARAFETVGNKVNAMTFSSDGKWLLV-ADNDSYI 580
>Z66521-4|CAD59160.1| 150|Caenorhabditis elegans Hypothetical
protein W02B12.3c protein.
Length = 150
Score = 28.3 bits (60), Expect = 5.2
Identities = 12/18 (66%), Positives = 13/18 (72%)
Frame = -1
Query: 659 PTRQESRAGRPVQTRHFV 606
P R+ESR GRP TRH V
Sbjct: 114 PPRRESRYGRPYSTRHRV 131
>Z66521-3|CAD59159.1| 148|Caenorhabditis elegans Hypothetical
protein W02B12.3b protein.
Length = 148
Score = 28.3 bits (60), Expect = 5.2
Identities = 12/18 (66%), Positives = 13/18 (72%)
Frame = -1
Query: 659 PTRQESRAGRPVQTRHFV 606
P R+ESR GRP TRH V
Sbjct: 114 PPRRESRYGRPYSTRHRV 131
>Z66521-2|CAA91395.1| 312|Caenorhabditis elegans Hypothetical
protein W02B12.3a protein.
Length = 312
Score = 28.3 bits (60), Expect = 5.2
Identities = 12/18 (66%), Positives = 13/18 (72%)
Frame = -1
Query: 659 PTRQESRAGRPVQTRHFV 606
P R+ESR GRP TRH V
Sbjct: 114 PPRRESRYGRPYSTRHRV 131
>Z81494-11|CAN99681.1| 455|Caenorhabditis elegans Hypothetical
protein F02E9.10c protein.
Length = 455
Score = 27.5 bits (58), Expect = 9.1
Identities = 20/95 (21%), Positives = 47/95 (49%), Gaps = 4/95 (4%)
Frame = +3
Query: 237 SKDGNCVISPVGNRITIYNLKQ-NKSNTLSFESHY-NYTAVDIAPNGMTLLAVTEKGEAQ 410
S DG +++ VG +Y ++ N +++F+ Y + ++P + + G
Sbjct: 83 SVDGKYMVA-VGMNSIVYEVELVNTVKSMAFDFGYLDAVFCAVSPLKTGYVTASYSGHLN 141
Query: 411 IISLTTSVVLHKYKFK--QQVNAVKFSPDGKYFAV 509
I +++ ++ + F +Q++ +K+S D KY A+
Sbjct: 142 EIQHSSNEIIRQEPFPTVKQISCLKYSRDAKYLAI 176
>Z81494-6|CAC42275.1| 451|Caenorhabditis elegans Hypothetical
protein F02E9.10a protein.
Length = 451
Score = 27.5 bits (58), Expect = 9.1
Identities = 20/95 (21%), Positives = 47/95 (49%), Gaps = 4/95 (4%)
Frame = +3
Query: 237 SKDGNCVISPVGNRITIYNLKQ-NKSNTLSFESHY-NYTAVDIAPNGMTLLAVTEKGEAQ 410
S DG +++ VG +Y ++ N +++F+ Y + ++P + + G
Sbjct: 83 SVDGKYMVA-VGMNSIVYEVELVNTVKSMAFDFGYLDAVFCAVSPLKTGYVTASYSGHLN 141
Query: 411 IISLTTSVVLHKYKFK--QQVNAVKFSPDGKYFAV 509
I +++ ++ + F +Q++ +K+S D KY A+
Sbjct: 142 EIQHSSNEIIRQEPFPTVKQISCLKYSRDAKYLAI 176
>Z69664-1|CAA93514.1| 325|Caenorhabditis elegans Hypothetical
protein K04D7.1 protein.
Length = 325
Score = 27.5 bits (58), Expect = 9.1
Identities = 17/84 (20%), Positives = 37/84 (44%), Gaps = 1/84 (1%)
Frame = +3
Query: 279 ITIYNLKQNKSNTLSFESHYNYT-AVDIAPNGMTLLAVTEKGEAQIISLTTSVVLHKYKF 455
+ ++NL + T + H Y V ++P+G + + G+A + L L+
Sbjct: 180 VKVWNLGNCRLKT-NHIGHTGYVNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLPG 238
Query: 456 KQQVNAVKFSPDGKYFAVCCDNTV 527
+NA+ FSP+ + +++
Sbjct: 239 NDVINAMSFSPNRYWLCAAVGSSI 262
>AF022978-4|AAG24178.1| 383|Caenorhabditis elegans Hypothetical
protein T01G6.5 protein.
Length = 383
Score = 27.5 bits (58), Expect = 9.1
Identities = 20/64 (31%), Positives = 25/64 (39%), Gaps = 1/64 (1%)
Frame = -1
Query: 524 CIIAAHGKVFSIRTKLNRXXXXXXXXXXXXHR-SCKTYNLCFTLFRNSQQCHSIWCNINS 348
C AHG+ F T L+ R SCK+ N C N QC S C +
Sbjct: 8 CDAPAHGRHFGALTCLSCAAFFRRAIFAKKKRKSCKSGNKCRDFNGNFPQCKS--CRMRK 65
Query: 347 CIIV 336
C+ V
Sbjct: 66 CLRV 69
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,625,425
Number of Sequences: 27780
Number of extensions: 326246
Number of successful extensions: 809
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 770
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 808
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1508017654
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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