Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmov10j04
         (668 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ869053-1|ABJ09600.1|  459|Apis mellifera capa-like receptor pr...    23   3.5  
DQ435324-1|ABD92639.1|  152|Apis mellifera OBP3 protein.               23   3.5  
AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase pro...    21   8.0  

>DQ869053-1|ABJ09600.1|  459|Apis mellifera capa-like receptor
           protein.
          Length = 459

 Score = 22.6 bits (46), Expect = 3.5
 Identities = 14/50 (28%), Positives = 21/50 (42%), Gaps = 1/50 (2%)
 Frame = +3

Query: 273 NRITIYNLKQNKSNTLSFESHYNYTAVDIAPN-GMTLLAVTEKGEAQIIS 419
           N   IYN      N L  E+  NY  ++   +     L  TEK   +I++
Sbjct: 373 NSCNIYNASSRMENNLRGETQSNYREMEKRQSVPANDLLTTEKDNNEIVT 422


>DQ435324-1|ABD92639.1|  152|Apis mellifera OBP3 protein.
          Length = 152

 Score = 22.6 bits (46), Expect = 3.5
 Identities = 13/30 (43%), Positives = 14/30 (46%)
 Frame = +3

Query: 240 KDGNCVISPVGNRITIYNLKQNKSNTLSFE 329
           K   CVI  V   IT Y +    SNT S E
Sbjct: 116 KFSRCVIDYVKFHITQYMISNANSNTTSEE 145


>AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase
           protein.
          Length = 580

 Score = 21.4 bits (43), Expect = 8.0
 Identities = 6/13 (46%), Positives = 11/13 (84%)
 Frame = -1

Query: 296 QIIYGYSVTNWTD 258
           Q+ +GY ++N+TD
Sbjct: 79  QVDFGYDISNFTD 91


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 189,186
Number of Sequences: 438
Number of extensions: 3831
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 20221290
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)