Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmov10j03
         (546 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292334-1|CAL23146.2|  390|Tribolium castaneum gustatory recept...    21   5.3  
AM292333-1|CAL23145.2|  316|Tribolium castaneum gustatory recept...    21   5.3  
AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory recept...    21   9.3  

>AM292334-1|CAL23146.2|  390|Tribolium castaneum gustatory receptor
           candidate 13 protein.
          Length = 390

 Score = 21.4 bits (43), Expect = 5.3
 Identities = 10/23 (43%), Positives = 13/23 (56%)
 Frame = +1

Query: 175 SNIKFSRKTVKAKSQNLILKTET 243
           SN+     T+K K  NL+ KT T
Sbjct: 148 SNVNSLTLTLKRKKWNLLFKTLT 170


>AM292333-1|CAL23145.2|  316|Tribolium castaneum gustatory receptor
           candidate 12 protein.
          Length = 316

 Score = 21.4 bits (43), Expect = 5.3
 Identities = 10/23 (43%), Positives = 13/23 (56%)
 Frame = +1

Query: 175 SNIKFSRKTVKAKSQNLILKTET 243
           SN+     T+K K  NL+ KT T
Sbjct: 74  SNVNSLTLTLKRKKWNLLFKTLT 96


>AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory receptor
           candidate 15 protein.
          Length = 455

 Score = 20.6 bits (41), Expect = 9.3
 Identities = 4/11 (36%), Positives = 8/11 (72%)
 Frame = -3

Query: 286 FLETAWCWLIQ 254
           F+   WCW+++
Sbjct: 129 FVLNIWCWIVE 139


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 81,380
Number of Sequences: 336
Number of extensions: 1480
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 13411456
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)