Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmov10j03
         (546 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC029564-1|AAH29564.1|  500|Homo sapiens beta-1,3-N-acetylgalact...    30   6.1  
AL135928-1|CAI21727.1|  500|Homo sapiens UDP-GalNAc:betaGlcNAc b...    30   6.1  
AB209046-1|BAD92283.1|  427|Homo sapiens UDP-GalNAc:betaGlcNAc b...    30   6.1  

>BC029564-1|AAH29564.1|  500|Homo sapiens
           beta-1,3-N-acetylgalactosaminyltransferase 2 protein.
          Length = 500

 Score = 29.9 bits (64), Expect = 6.1
 Identities = 21/59 (35%), Positives = 31/59 (52%), Gaps = 2/59 (3%)
 Frame = +1

Query: 91  EENTVFLIES*IIIKMFKIPEWDSY--VPKSNIKFSRKTVKAKSQNLILKTETPINIEL 261
           EE+ +   ES I   +  +   D+Y  VP   + F R TV+  S NL+LKT+    I+L
Sbjct: 305 EEDALLKEESSIYDDIVFVDVVDTYRNVPAKLLNFYRWTVETTSFNLLLKTDDDCYIDL 363


>AL135928-1|CAI21727.1|  500|Homo sapiens UDP-GalNAc:betaGlcNAc beta
           1,3-galactosaminyltransferase, polypeptide 2 protein.
          Length = 500

 Score = 29.9 bits (64), Expect = 6.1
 Identities = 21/59 (35%), Positives = 31/59 (52%), Gaps = 2/59 (3%)
 Frame = +1

Query: 91  EENTVFLIES*IIIKMFKIPEWDSY--VPKSNIKFSRKTVKAKSQNLILKTETPINIEL 261
           EE+ +   ES I   +  +   D+Y  VP   + F R TV+  S NL+LKT+    I+L
Sbjct: 305 EEDALLKEESSIYDDIVFVDVVDTYRNVPAKLLNFYRWTVETTSFNLLLKTDDDCYIDL 363


>AB209046-1|BAD92283.1|  427|Homo sapiens UDP-GalNAc:betaGlcNAc beta
           1,3-galactosaminyltransferase, polypeptide 2 variant
           protein.
          Length = 427

 Score = 29.9 bits (64), Expect = 6.1
 Identities = 21/59 (35%), Positives = 31/59 (52%), Gaps = 2/59 (3%)
 Frame = +1

Query: 91  EENTVFLIES*IIIKMFKIPEWDSY--VPKSNIKFSRKTVKAKSQNLILKTETPINIEL 261
           EE+ +   ES I   +  +   D+Y  VP   + F R TV+  S NL+LKT+    I+L
Sbjct: 232 EEDALLKEESSIYDDIVFVDVVDTYRNVPAKLLNFYRWTVETTSFNLLLKTDDDCYIDL 290


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 45,202,765
Number of Sequences: 237096
Number of extensions: 717917
Number of successful extensions: 4935
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 4930
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4935
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5364536570
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)