Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmov10j02
         (690 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggeri...    23   3.1  
AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory recept...    22   5.4  
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    21   7.2  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    21   7.2  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    21   7.2  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    21   7.2  
AF225975-2|AAF74116.1|  302|Tribolium castaneum Tc-tailless prot...    21   9.5  
AF219117-1|AAF71999.1|  406|Tribolium castaneum tailless ortholo...    21   9.5  

>EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggering
           hormone receptorisoform A protein.
          Length = 434

 Score = 22.6 bits (46), Expect = 3.1
 Identities = 13/41 (31%), Positives = 21/41 (51%)
 Frame = +2

Query: 503 MGEHIKDIVILSSITQVLALINNYFWLLLLILPIRVFWLLW 625
           + +HI +I + +    VL L        L ++P RVF +LW
Sbjct: 273 LNKHIDNISLRARKQVVLMLGTVVLSFFLCLIPFRVF-ILW 312


>AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory receptor
           candidate 40 protein.
          Length = 373

 Score = 21.8 bits (44), Expect = 5.4
 Identities = 7/22 (31%), Positives = 13/22 (59%)
 Frame = +2

Query: 317 FYGIITALFYYENISNWVLFFN 382
           F+  +T++ + +  S W LF N
Sbjct: 100 FHSFMTSVLFSQVASRWPLFLN 121


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
           variant 2 protein.
          Length = 1558

 Score = 21.4 bits (43), Expect = 7.2
 Identities = 7/28 (25%), Positives = 16/28 (57%)
 Frame = +3

Query: 306 RQPLFMEL*LPYFTMKTYQIGYSFLMFW 389
           ++P F    + +FT   + +G + L+F+
Sbjct: 160 KKPAFSHFLIVFFTETLHTVGIALLIFY 187


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
           variant 1 protein.
          Length = 1558

 Score = 21.4 bits (43), Expect = 7.2
 Identities = 7/28 (25%), Positives = 16/28 (57%)
 Frame = +3

Query: 306 RQPLFMEL*LPYFTMKTYQIGYSFLMFW 389
           ++P F    + +FT   + +G + L+F+
Sbjct: 160 KKPAFSHFLIVFFTETLHTVGIALLIFY 187


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
           CHS1B protein.
          Length = 1558

 Score = 21.4 bits (43), Expect = 7.2
 Identities = 7/28 (25%), Positives = 16/28 (57%)
 Frame = +3

Query: 306 RQPLFMEL*LPYFTMKTYQIGYSFLMFW 389
           ++P F    + +FT   + +G + L+F+
Sbjct: 160 KKPAFSHFLIVFFTETLHTVGIALLIFY 187


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
           CHS1A protein.
          Length = 1558

 Score = 21.4 bits (43), Expect = 7.2
 Identities = 7/28 (25%), Positives = 16/28 (57%)
 Frame = +3

Query: 306 RQPLFMEL*LPYFTMKTYQIGYSFLMFW 389
           ++P F    + +FT   + +G + L+F+
Sbjct: 160 KKPAFSHFLIVFFTETLHTVGIALLIFY 187


>AF225975-2|AAF74116.1|  302|Tribolium castaneum Tc-tailless
           protein.
          Length = 302

 Score = 21.0 bits (42), Expect = 9.5
 Identities = 6/19 (31%), Positives = 13/19 (68%)
 Frame = +2

Query: 422 MMYISKPRYLNNTQLLDPG 478
           ++ ++ P+Y  N  ++DPG
Sbjct: 143 VLNLTMPKYEPNPSIIDPG 161


>AF219117-1|AAF71999.1|  406|Tribolium castaneum tailless ortholog
           protein.
          Length = 406

 Score = 21.0 bits (42), Expect = 9.5
 Identities = 6/19 (31%), Positives = 13/19 (68%)
 Frame = +2

Query: 422 MMYISKPRYLNNTQLLDPG 478
           ++ ++ P+Y  N  ++DPG
Sbjct: 143 VLNLTMPKYEPNPSIIDPG 161


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 172,196
Number of Sequences: 336
Number of extensions: 3892
Number of successful extensions: 17
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18114270
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)