Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmov10j02
(690 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z75546-4|CAA99892.2| 169|Caenorhabditis elegans Hypothetical pr... 63 2e-10
Z92972-2|CAB07487.1| 336|Caenorhabditis elegans Hypothetical pr... 29 4.1
Z72502-12|CAI46558.2| 303|Caenorhabditis elegans Hypothetical p... 29 4.1
AC025727-1|AAG23391.3| 429|Caenorhabditis elegans Hypothetical ... 28 5.5
Z82075-6|CAN99721.1| 1047|Caenorhabditis elegans Hypothetical pr... 27 9.6
Z82075-5|CAD54162.1| 1021|Caenorhabditis elegans Hypothetical pr... 27 9.6
Z82075-4|CAB04932.1| 1023|Caenorhabditis elegans Hypothetical pr... 27 9.6
AL021489-6|CAN99715.1| 1047|Caenorhabditis elegans Hypothetical ... 27 9.6
AL021489-5|CAD54166.1| 1021|Caenorhabditis elegans Hypothetical ... 27 9.6
AL021489-4|CAA16371.1| 1023|Caenorhabditis elegans Hypothetical ... 27 9.6
AC024781-2|AAK39328.2| 311|Caenorhabditis elegans Hypothetical ... 27 9.6
>Z75546-4|CAA99892.2| 169|Caenorhabditis elegans Hypothetical
protein R05D11.5 protein.
Length = 169
Score = 62.9 bits (146), Expect = 2e-10
Identities = 44/146 (30%), Positives = 69/146 (47%)
Frame = +2
Query: 251 QILVENAATVKFYRNMSMAATSFYGIITALFYYENISNWVLFFNVLVLIIHIACYQLMMY 430
+I EN TV Y S + + Y + +F + S +FF V L+ I M
Sbjct: 11 EIYEENQKTVTTYSVASTISMAIY-YSSCMFLSQCSSTDYVFFAVSALV-QIFAILFMKS 68
Query: 431 ISKPRYLNNTQLLDPGLDLNMEGGMGEHIKDIVILSSITQVLALINNYFWLLLLILPIRV 610
++K + + +LD G DLN GE+ KD +IL+ I Q+++L + Y +LLLL P
Sbjct: 69 LAKAKLDDKGHVLDAGADLNDPEAFGEYCKDAIILTVIIQIISLYSTYGFLLLLAFPGAA 128
Query: 611 FWLLWTNILGPWFFQEAPENPEKDEK 688
+ L PW ++ E D+K
Sbjct: 129 TYKFVAGFLLPW-LTAGSDSDEMDDK 153
>Z92972-2|CAB07487.1| 336|Caenorhabditis elegans Hypothetical
protein T19C9.2 protein.
Length = 336
Score = 28.7 bits (61), Expect = 4.1
Identities = 16/62 (25%), Positives = 29/62 (46%)
Frame = +2
Query: 392 LIIHIACYQLMMYISKPRYLNNTQLLDPGLDLNMEGGMGEHIKDIVILSSITQVLALINN 571
+I H+AC +Y++ PR L+ T D + L ++I ++T +LA
Sbjct: 223 IIFHVACLVYYLYVAPPRTLSQTTRRDQKIFLVCVTAQTSVPLLVIIAPAMTVLLASWAG 282
Query: 572 YF 577
Y+
Sbjct: 283 YY 284
>Z72502-12|CAI46558.2| 303|Caenorhabditis elegans Hypothetical
protein C08B6.13 protein.
Length = 303
Score = 28.7 bits (61), Expect = 4.1
Identities = 21/67 (31%), Positives = 32/67 (47%), Gaps = 1/67 (1%)
Frame = +2
Query: 275 TVKFYRNMSMAATSFYGIITALFYYENISNWVLFFNVLVLII-HIACYQLMMYISKPRYL 451
T+++ MAA F II F S V FF V + I+ I + L++ PR+
Sbjct: 89 TIRYIMTFLMAANRFVCIINPRFSKFFDSETVTFFGVGIWILAFIGSWYLLLLGCFPRFD 148
Query: 452 NNTQLLD 472
+ T +LD
Sbjct: 149 SETFVLD 155
>AC025727-1|AAG23391.3| 429|Caenorhabditis elegans Hypothetical
protein Y73E7A.3 protein.
Length = 429
Score = 28.3 bits (60), Expect = 5.5
Identities = 11/56 (19%), Positives = 30/56 (53%)
Frame = +2
Query: 254 ILVENAATVKFYRNMSMAATSFYGIITALFYYENISNWVLFFNVLVLIIHIACYQL 421
++++ + + F N+S FY ++ +F +++ +++ F + +V II Y +
Sbjct: 302 VVLQKTSALMF--NLSTLTADFYSLLFGIFMFKDTFHYLYFVSFIVCIIGSVIYSM 355
>Z82075-6|CAN99721.1| 1047|Caenorhabditis elegans Hypothetical
protein W07A8.2c protein.
Length = 1047
Score = 27.5 bits (58), Expect = 9.6
Identities = 17/91 (18%), Positives = 41/91 (45%)
Frame = +2
Query: 293 NMSMAATSFYGIITALFYYENISNWVLFFNVLVLIIHIACYQLMMYISKPRYLNNTQLLD 472
NM+ + I L Y+EN+ L + +++ LM+ + + + +LD
Sbjct: 305 NMTWKSVHISSKIGLLEYFENMKEHKLKKYLNLIVQPEGLSPLMIAVQNTQIETVSWMLD 364
Query: 473 PGLDLNMEGGMGEHIKDIVILSSITQVLALI 565
G D+N+ G+++ + +S ++ ++
Sbjct: 365 HGADINILSSEGQNVLHVAATASSGDLIKIL 395
>Z82075-5|CAD54162.1| 1021|Caenorhabditis elegans Hypothetical
protein W07A8.2b protein.
Length = 1021
Score = 27.5 bits (58), Expect = 9.6
Identities = 17/91 (18%), Positives = 41/91 (45%)
Frame = +2
Query: 293 NMSMAATSFYGIITALFYYENISNWVLFFNVLVLIIHIACYQLMMYISKPRYLNNTQLLD 472
NM+ + I L Y+EN+ L + +++ LM+ + + + +LD
Sbjct: 279 NMTWKSVHISSKIGLLEYFENMKEHKLKKYLNLIVQPEGLSPLMIAVQNTQIETVSWMLD 338
Query: 473 PGLDLNMEGGMGEHIKDIVILSSITQVLALI 565
G D+N+ G+++ + +S ++ ++
Sbjct: 339 HGADINILSSEGQNVLHVAATASSGDLIKIL 369
>Z82075-4|CAB04932.1| 1023|Caenorhabditis elegans Hypothetical
protein W07A8.2a protein.
Length = 1023
Score = 27.5 bits (58), Expect = 9.6
Identities = 17/91 (18%), Positives = 41/91 (45%)
Frame = +2
Query: 293 NMSMAATSFYGIITALFYYENISNWVLFFNVLVLIIHIACYQLMMYISKPRYLNNTQLLD 472
NM+ + I L Y+EN+ L + +++ LM+ + + + +LD
Sbjct: 281 NMTWKSVHISSKIGLLEYFENMKEHKLKKYLNLIVQPEGLSPLMIAVQNTQIETVSWMLD 340
Query: 473 PGLDLNMEGGMGEHIKDIVILSSITQVLALI 565
G D+N+ G+++ + +S ++ ++
Sbjct: 341 HGADINILSSEGQNVLHVAATASSGDLIKIL 371
>AL021489-6|CAN99715.1| 1047|Caenorhabditis elegans Hypothetical
protein W07A8.2c protein.
Length = 1047
Score = 27.5 bits (58), Expect = 9.6
Identities = 17/91 (18%), Positives = 41/91 (45%)
Frame = +2
Query: 293 NMSMAATSFYGIITALFYYENISNWVLFFNVLVLIIHIACYQLMMYISKPRYLNNTQLLD 472
NM+ + I L Y+EN+ L + +++ LM+ + + + +LD
Sbjct: 305 NMTWKSVHISSKIGLLEYFENMKEHKLKKYLNLIVQPEGLSPLMIAVQNTQIETVSWMLD 364
Query: 473 PGLDLNMEGGMGEHIKDIVILSSITQVLALI 565
G D+N+ G+++ + +S ++ ++
Sbjct: 365 HGADINILSSEGQNVLHVAATASSGDLIKIL 395
>AL021489-5|CAD54166.1| 1021|Caenorhabditis elegans Hypothetical
protein W07A8.2b protein.
Length = 1021
Score = 27.5 bits (58), Expect = 9.6
Identities = 17/91 (18%), Positives = 41/91 (45%)
Frame = +2
Query: 293 NMSMAATSFYGIITALFYYENISNWVLFFNVLVLIIHIACYQLMMYISKPRYLNNTQLLD 472
NM+ + I L Y+EN+ L + +++ LM+ + + + +LD
Sbjct: 279 NMTWKSVHISSKIGLLEYFENMKEHKLKKYLNLIVQPEGLSPLMIAVQNTQIETVSWMLD 338
Query: 473 PGLDLNMEGGMGEHIKDIVILSSITQVLALI 565
G D+N+ G+++ + +S ++ ++
Sbjct: 339 HGADINILSSEGQNVLHVAATASSGDLIKIL 369
>AL021489-4|CAA16371.1| 1023|Caenorhabditis elegans Hypothetical
protein W07A8.2a protein.
Length = 1023
Score = 27.5 bits (58), Expect = 9.6
Identities = 17/91 (18%), Positives = 41/91 (45%)
Frame = +2
Query: 293 NMSMAATSFYGIITALFYYENISNWVLFFNVLVLIIHIACYQLMMYISKPRYLNNTQLLD 472
NM+ + I L Y+EN+ L + +++ LM+ + + + +LD
Sbjct: 281 NMTWKSVHISSKIGLLEYFENMKEHKLKKYLNLIVQPEGLSPLMIAVQNTQIETVSWMLD 340
Query: 473 PGLDLNMEGGMGEHIKDIVILSSITQVLALI 565
G D+N+ G+++ + +S ++ ++
Sbjct: 341 HGADINILSSEGQNVLHVAATASSGDLIKIL 371
>AC024781-2|AAK39328.2| 311|Caenorhabditis elegans Hypothetical
protein Y43H11AL.2 protein.
Length = 311
Score = 27.5 bits (58), Expect = 9.6
Identities = 13/34 (38%), Positives = 17/34 (50%)
Frame = +3
Query: 288 IVICRWRQPLFMEL*LPYFTMKTYQIGYSFLMFW 389
I + W PLF +L Y T K + +FL FW
Sbjct: 48 ISLALWLIPLFPQLWQNYKTKKCEGLSLAFLFFW 81
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,996,725
Number of Sequences: 27780
Number of extensions: 339475
Number of successful extensions: 746
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 722
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 746
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1581836700
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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