Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmov10i24
         (593 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY070615-1|AAL48086.1|  179|Drosophila melanogaster RE71708p pro...   266   1e-71
AE014297-3505|AAF56264.1|  179|Drosophila melanogaster CG5677-PA...   266   1e-71

>AY070615-1|AAL48086.1|  179|Drosophila melanogaster RE71708p
           protein.
          Length = 179

 Score =  266 bits (653), Expect = 1e-71
 Identities = 121/168 (72%), Positives = 143/168 (85%)
 Frame = +3

Query: 90  MYSVLTRGNAILTYTLSVXXXXXXXXXXXXXXVDYRTGAQMNTVKVVVKNVPDYGASRER 269
           M++VLTRGNA + YTLSV              +DYRT A +NTV+V+VKNVPDYGASRE+
Sbjct: 1   MHTVLTRGNATVAYTLSVLACLTFSCFLSTVFLDYRTDANINTVRVLVKNVPDYGASREK 60

Query: 270 NDLGFLTFDLKTDLSNLFNWNVKQLFLYLTAEYITPSNELNQVVLWDKIILRGENAVLDF 449
           +DLGF+TFDL+T+L+ +FNWNVKQLFLYLTAEY TP+N+LNQVVLWDKIILRG+NAVLDF
Sbjct: 61  HDLGFVTFDLQTNLTGIFNWNVKQLFLYLTAEYQTPANQLNQVVLWDKIILRGDNAVLDF 120

Query: 450 KNMNTKYYFWDDGNGLKGHSNVTLTLSWNIIPNAGLLPNIQALGQHSF 593
           KNMNTKYYFWDDGNGLK + NV+L LSWNIIPNAGLLP++QA G+H F
Sbjct: 121 KNMNTKYYFWDDGNGLKDNRNVSLYLSWNIIPNAGLLPSVQATGKHLF 168


>AE014297-3505|AAF56264.1|  179|Drosophila melanogaster CG5677-PA
           protein.
          Length = 179

 Score =  266 bits (653), Expect = 1e-71
 Identities = 121/168 (72%), Positives = 143/168 (85%)
 Frame = +3

Query: 90  MYSVLTRGNAILTYTLSVXXXXXXXXXXXXXXVDYRTGAQMNTVKVVVKNVPDYGASRER 269
           M++VLTRGNA + YTLSV              +DYRT A +NTV+V+VKNVPDYGASRE+
Sbjct: 1   MHTVLTRGNATVAYTLSVLACLTFSCFLSTVFLDYRTDANINTVRVLVKNVPDYGASREK 60

Query: 270 NDLGFLTFDLKTDLSNLFNWNVKQLFLYLTAEYITPSNELNQVVLWDKIILRGENAVLDF 449
           +DLGF+TFDL+T+L+ +FNWNVKQLFLYLTAEY TP+N+LNQVVLWDKIILRG+NAVLDF
Sbjct: 61  HDLGFVTFDLQTNLTGIFNWNVKQLFLYLTAEYQTPANQLNQVVLWDKIILRGDNAVLDF 120

Query: 450 KNMNTKYYFWDDGNGLKGHSNVTLTLSWNIIPNAGLLPNIQALGQHSF 593
           KNMNTKYYFWDDGNGLK + NV+L LSWNIIPNAGLLP++QA G+H F
Sbjct: 121 KNMNTKYYFWDDGNGLKDNRNVSLYLSWNIIPNAGLLPSVQATGKHLF 168


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,114,217
Number of Sequences: 53049
Number of extensions: 460222
Number of successful extensions: 803
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 783
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 803
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2400202284
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)