Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmov10i23
         (483 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory recept...    24   0.85 
EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine vasopre...    22   2.6  
U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse ...    21   4.5  
DQ659251-1|ABG47449.1|  366|Tribolium castaneum chitinase 11 pro...    21   7.9  

>AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory receptor
           candidate 57 protein.
          Length = 387

 Score = 23.8 bits (49), Expect = 0.85
 Identities = 11/28 (39%), Positives = 19/28 (67%), Gaps = 4/28 (14%)
 Frame = -3

Query: 121 FQLHFALFHLYIFISLPF----WKFSIG 50
           F+++FA+F+LY+ + L F    W  S+G
Sbjct: 113 FRMNFAIFNLYMVLLLLFDAYLWISSVG 140


>EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine
           vasopressin receptor protein.
          Length = 403

 Score = 22.2 bits (45), Expect = 2.6
 Identities = 10/25 (40%), Positives = 13/25 (52%)
 Frame = -2

Query: 128 WPFSTAFCTISFIYFYFTSVLEVQH 54
           W  S AFC      F +TSV E ++
Sbjct: 164 WVASLAFCIPQLTIFTYTSVGEDEY 188


>U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse
           transcriptase andRNase H protein.
          Length = 712

 Score = 21.4 bits (43), Expect = 4.5
 Identities = 9/16 (56%), Positives = 10/16 (62%), Gaps = 1/16 (6%)
 Frame = +1

Query: 10  CNFLRKYCI-YQAFCQ 54
           CNF RK+C  Y A  Q
Sbjct: 542 CNFYRKFCARYSAATQ 557


>DQ659251-1|ABG47449.1|  366|Tribolium castaneum chitinase 11
           protein.
          Length = 366

 Score = 20.6 bits (41), Expect = 7.9
 Identities = 8/13 (61%), Positives = 9/13 (69%)
 Frame = +2

Query: 302 SIHQCSNKTDKVL 340
           S HQ   KTDK+L
Sbjct: 15  STHQTEAKTDKIL 27


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 108,077
Number of Sequences: 336
Number of extensions: 2242
Number of successful extensions: 7
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used: 11352204
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)