Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmov10i23
(483 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U84408-1|AAC50954.1| 296|Homo sapiens MyD88 protein. 40 0.006
U70451-1|AAB49967.1| 296|Homo sapiens MyD88 protein. 40 0.006
BT007376-1|AAP36040.1| 296|Homo sapiens myeloid differentiation... 40 0.006
BC013589-1|AAH13589.1| 296|Homo sapiens myeloid differentiation... 40 0.006
U97018-1|AAB57824.1| 717|Homo sapiens HuEMAP protein. 29 6.5
BC033043-1|AAH33043.1| 815|Homo sapiens echinoderm microtubule ... 29 6.5
BC032541-1|AAH32541.1| 815|Homo sapiens echinoderm microtubule ... 29 6.5
AJ420603-1|CAD12600.2| 815|Homo sapiens echinoderm microtubule ... 29 6.5
DQ084494-1|AAZ39809.1| 112|Homo sapiens MLL-MAML2 fusion protei... 29 8.6
AJ972402-1|CAI99884.1| 637|Homo sapiens MLL-MAML2 protein. 29 8.6
>U84408-1|AAC50954.1| 296|Homo sapiens MyD88 protein.
Length = 296
Score = 39.5 bits (88), Expect = 0.006
Identities = 24/89 (26%), Positives = 42/89 (47%)
Frame = +2
Query: 134 SDINNLPLLMIPYKTRQMLSCLLNTKKIIPSDGPDKLPRDWRGLASLVGISSQEAGSIHQ 313
S ++LPL + + R+ LS LN + + +D W LA + E +
Sbjct: 15 SSTSSLPLAALNMRVRRRLSLFLNVRTQVAAD--------WTALAEEMDFEYLEIRQLET 66
Query: 314 CSNKTDKVLEIWQRNGSPTVGQLLEFLQR 400
++ T ++L+ WQ +VG+LLE L +
Sbjct: 67 QADPTGRLLDAWQGRPGASVGRLLELLTK 95
>U70451-1|AAB49967.1| 296|Homo sapiens MyD88 protein.
Length = 296
Score = 39.5 bits (88), Expect = 0.006
Identities = 24/89 (26%), Positives = 42/89 (47%)
Frame = +2
Query: 134 SDINNLPLLMIPYKTRQMLSCLLNTKKIIPSDGPDKLPRDWRGLASLVGISSQEAGSIHQ 313
S ++LPL + + R+ LS LN + + +D W LA + E +
Sbjct: 15 SSTSSLPLAALNMRVRRRLSLFLNVRTQVAAD--------WTALAEEMDFEYLEIRQLET 66
Query: 314 CSNKTDKVLEIWQRNGSPTVGQLLEFLQR 400
++ T ++L+ WQ +VG+LLE L +
Sbjct: 67 QADPTGRLLDAWQGRPGASVGRLLELLTK 95
>BT007376-1|AAP36040.1| 296|Homo sapiens myeloid differentiation
primary response gene (88) protein.
Length = 296
Score = 39.5 bits (88), Expect = 0.006
Identities = 24/89 (26%), Positives = 42/89 (47%)
Frame = +2
Query: 134 SDINNLPLLMIPYKTRQMLSCLLNTKKIIPSDGPDKLPRDWRGLASLVGISSQEAGSIHQ 313
S ++LPL + + R+ LS LN + + +D W LA + E +
Sbjct: 15 SSTSSLPLAALNMRVRRRLSLFLNVRTQVAAD--------WTALAEEMDFEYLEIRQLET 66
Query: 314 CSNKTDKVLEIWQRNGSPTVGQLLEFLQR 400
++ T ++L+ WQ +VG+LLE L +
Sbjct: 67 QADPTGRLLDAWQGRPGASVGRLLELLTK 95
>BC013589-1|AAH13589.1| 296|Homo sapiens myeloid differentiation
primary response gene (88) protein.
Length = 296
Score = 39.5 bits (88), Expect = 0.006
Identities = 24/89 (26%), Positives = 42/89 (47%)
Frame = +2
Query: 134 SDINNLPLLMIPYKTRQMLSCLLNTKKIIPSDGPDKLPRDWRGLASLVGISSQEAGSIHQ 313
S ++LPL + + R+ LS LN + + +D W LA + E +
Sbjct: 15 SSTSSLPLAALNMRVRRRLSLFLNVRTQVAAD--------WTALAEEMDFEYLEIRQLET 66
Query: 314 CSNKTDKVLEIWQRNGSPTVGQLLEFLQR 400
++ T ++L+ WQ +VG+LLE L +
Sbjct: 67 QADPTGRLLDAWQGRPGASVGRLLELLTK 95
>U97018-1|AAB57824.1| 717|Homo sapiens HuEMAP protein.
Length = 717
Score = 29.5 bits (63), Expect = 6.5
Identities = 11/24 (45%), Positives = 16/24 (66%)
Frame = -1
Query: 213 FLVFNRHDNICLVLYGIINNGRLF 142
FL HDN C+ +YG+ +NGR +
Sbjct: 542 FLAIGSHDN-CIYIYGVSDNGRKY 564
>BC033043-1|AAH33043.1| 815|Homo sapiens echinoderm microtubule
associated protein like 1 protein.
Length = 815
Score = 29.5 bits (63), Expect = 6.5
Identities = 11/24 (45%), Positives = 16/24 (66%)
Frame = -1
Query: 213 FLVFNRHDNICLVLYGIINNGRLF 142
FL HDN C+ +YG+ +NGR +
Sbjct: 640 FLAIGSHDN-CIYIYGVSDNGRKY 662
>BC032541-1|AAH32541.1| 815|Homo sapiens echinoderm microtubule
associated protein like 1 protein.
Length = 815
Score = 29.5 bits (63), Expect = 6.5
Identities = 11/24 (45%), Positives = 16/24 (66%)
Frame = -1
Query: 213 FLVFNRHDNICLVLYGIINNGRLF 142
FL HDN C+ +YG+ +NGR +
Sbjct: 640 FLAIGSHDN-CIYIYGVSDNGRKY 662
>AJ420603-1|CAD12600.2| 815|Homo sapiens echinoderm microtubule
associated protein protein.
Length = 815
Score = 29.5 bits (63), Expect = 6.5
Identities = 11/24 (45%), Positives = 16/24 (66%)
Frame = -1
Query: 213 FLVFNRHDNICLVLYGIINNGRLF 142
FL HDN C+ +YG+ +NGR +
Sbjct: 640 FLAIGSHDN-CIYIYGVSDNGRKY 662
>DQ084494-1|AAZ39809.1| 112|Homo sapiens MLL-MAML2 fusion protein
protein.
Length = 112
Score = 29.1 bits (62), Expect = 8.6
Identities = 18/52 (34%), Positives = 31/52 (59%), Gaps = 3/52 (5%)
Frame = +2
Query: 176 TRQMLSCLLN---TKKIIPSDGPDKLPRDWRGLASLVGISSQEAGSIHQCSN 322
T +LS L N +K+ IP+DG ++ D++ S+VG ++ + S + CSN
Sbjct: 14 TLNILSTLSNGNSSKQKIPADGVHRIRVDFKDQHSVVGQNTGPSPSPNPCSN 65
>AJ972402-1|CAI99884.1| 637|Homo sapiens MLL-MAML2 protein.
Length = 637
Score = 29.1 bits (62), Expect = 8.6
Identities = 18/52 (34%), Positives = 31/52 (59%), Gaps = 3/52 (5%)
Frame = +2
Query: 176 TRQMLSCLLN---TKKIIPSDGPDKLPRDWRGLASLVGISSQEAGSIHQCSN 322
T +LS L N +K+ IP+DG ++ D++ S+VG ++ + S + CSN
Sbjct: 164 TLNILSTLSNGNSSKQKIPADGVHRIRVDFKDQHSVVGQNTGPSPSPNPCSN 215
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 63,100,154
Number of Sequences: 237096
Number of extensions: 1164803
Number of successful extensions: 6188
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 6088
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6188
length of database: 76,859,062
effective HSP length: 84
effective length of database: 56,942,998
effective search space used: 4327667848
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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