Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmov10i23
(483 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z66520-8|CAE17837.1| 357|Caenorhabditis elegans Hypothetical pr... 33 0.11
Z22178-5|CAA80155.1| 207|Caenorhabditis elegans Hypothetical pr... 32 0.25
U22831-4|AAK20066.1| 633|Caenorhabditis elegans Hypothetical pr... 30 1.0
S47168-2|AAB23866.2| 919|Caenorhabditis elegans UNC-5 protein. 29 1.8
S47168-1|AAB23867.2| 947|Caenorhabditis elegans UNC-5 protein. 29 1.8
AF036698-4|AAB88355.1| 919|Caenorhabditis elegans Uncoordinated... 29 1.8
U50311-4|AAA92309.1| 491|Caenorhabditis elegans Serpentine rece... 29 2.3
U50311-3|AAK68203.1| 589|Caenorhabditis elegans Serpentine rece... 29 2.3
AF040655-2|AAB95042.2| 306|Caenorhabditis elegans Serpentine re... 27 7.1
AL110479-15|CAB54361.2| 400|Caenorhabditis elegans Hypothetical... 27 9.4
>Z66520-8|CAE17837.1| 357|Caenorhabditis elegans Hypothetical
protein F49E12.12 protein.
Length = 357
Score = 33.1 bits (72), Expect = 0.11
Identities = 14/37 (37%), Positives = 19/37 (51%), Gaps = 2/37 (5%)
Frame = -2
Query: 173 YMESLITADCLYQSRWPFSTA--FCTISFIYFYFTSV 69
Y+ L T CLY + WP + C I+ I FY T +
Sbjct: 261 YISFLYTYPCLYHTEWPAAICEYICIITIIVFYLTQI 297
>Z22178-5|CAA80155.1| 207|Caenorhabditis elegans Hypothetical
protein F54C8.5 protein.
Length = 207
Score = 31.9 bits (69), Expect = 0.25
Identities = 16/57 (28%), Positives = 34/57 (59%)
Frame = +2
Query: 200 LNTKKIIPSDGPDKLPRDWRGLASLVGISSQEAGSIHQCSNKTDKVLEIWQRNGSPT 370
L+T++++ ++ ++L R W A V I+++E+ +H+ + +EI + N SPT
Sbjct: 130 LSTQRVVRAEEGEELARQWD--AKFVEITARESNRVHEVFELLLREIEISRGNLSPT 184
>U22831-4|AAK20066.1| 633|Caenorhabditis elegans Hypothetical
protein F47D12.5 protein.
Length = 633
Score = 29.9 bits (64), Expect = 1.0
Identities = 12/26 (46%), Positives = 18/26 (69%)
Frame = -1
Query: 213 FLVFNRHDNICLVLYGIINNGRLFIS 136
F F+ + +C +L G+ NNGRLFI+
Sbjct: 312 FQPFDLYQLVCKLLDGVYNNGRLFIA 337
>S47168-2|AAB23866.2| 919|Caenorhabditis elegans UNC-5 protein.
Length = 919
Score = 29.1 bits (62), Expect = 1.8
Identities = 18/59 (30%), Positives = 29/59 (49%), Gaps = 2/59 (3%)
Frame = +2
Query: 227 DGPDKLPRDWRGLASLVGISS--QEAGSIHQCSNKTDKVLEIWQRNGSPTVGQLLEFLQ 397
D P++ DWRGLA + Q S CS T +L++W+ + S + + + LQ
Sbjct: 835 DMPNESHSDWRGLAKKLHYDRYLQFFASFPDCS-PTSLLLDLWEASSSGSARAVPDLLQ 892
>S47168-1|AAB23867.2| 947|Caenorhabditis elegans UNC-5 protein.
Length = 947
Score = 29.1 bits (62), Expect = 1.8
Identities = 18/59 (30%), Positives = 29/59 (49%), Gaps = 2/59 (3%)
Frame = +2
Query: 227 DGPDKLPRDWRGLASLVGISS--QEAGSIHQCSNKTDKVLEIWQRNGSPTVGQLLEFLQ 397
D P++ DWRGLA + Q S CS T +L++W+ + S + + + LQ
Sbjct: 863 DMPNESHSDWRGLAKKLHYDRYLQFFASFPDCS-PTSLLLDLWEASSSGSARAVPDLLQ 920
>AF036698-4|AAB88355.1| 919|Caenorhabditis elegans Uncoordinated
protein 5, isoform a protein.
Length = 919
Score = 29.1 bits (62), Expect = 1.8
Identities = 18/59 (30%), Positives = 29/59 (49%), Gaps = 2/59 (3%)
Frame = +2
Query: 227 DGPDKLPRDWRGLASLVGISS--QEAGSIHQCSNKTDKVLEIWQRNGSPTVGQLLEFLQ 397
D P++ DWRGLA + Q S CS T +L++W+ + S + + + LQ
Sbjct: 835 DMPNESHSDWRGLAKKLHYDRYLQFFASFPDCS-PTSLLLDLWEASSSGSARAVPDLLQ 892
>U50311-4|AAA92309.1| 491|Caenorhabditis elegans Serpentine
receptor, class sx protein34, isoform a protein.
Length = 491
Score = 28.7 bits (61), Expect = 2.3
Identities = 15/58 (25%), Positives = 28/58 (48%)
Frame = -1
Query: 219 IIFLVFNRHDNICLVLYGIINNGRLFISESLAIFNCILHYFIYIFLFHFRFGSSALAK 46
I ++F + L+LY + G++ + +F I +YI + F F S+ +AK
Sbjct: 313 ITMVIFGVMSSTILLLYIFCHFGKILPQHKVFLFFTIAFGAVYIITYPFEFTSNPVAK 370
>U50311-3|AAK68203.1| 589|Caenorhabditis elegans Serpentine
receptor, class sx protein34, isoform b protein.
Length = 589
Score = 28.7 bits (61), Expect = 2.3
Identities = 15/58 (25%), Positives = 28/58 (48%)
Frame = -1
Query: 219 IIFLVFNRHDNICLVLYGIINNGRLFISESLAIFNCILHYFIYIFLFHFRFGSSALAK 46
I ++F + L+LY + G++ + +F I +YI + F F S+ +AK
Sbjct: 313 ITMVIFGVMSSTILLLYIFCHFGKILPQHKVFLFFTIAFGAVYIITYPFEFTSNPVAK 370
>AF040655-2|AAB95042.2| 306|Caenorhabditis elegans Serpentine
receptor, class x protein111 protein.
Length = 306
Score = 27.1 bits (57), Expect = 7.1
Identities = 13/39 (33%), Positives = 23/39 (58%)
Frame = -1
Query: 195 HDNICLVLYGIINNGRLFISESLAIFNCILHYFIYIFLF 79
HD ++ I+ + LF+ LA+F+ +++ FI I LF
Sbjct: 162 HDECPYFIHYILQSDFLFLVLPLAVFSNVMNVFIAIKLF 200
>AL110479-15|CAB54361.2| 400|Caenorhabditis elegans Hypothetical
protein Y105C5B.16 protein.
Length = 400
Score = 26.6 bits (56), Expect = 9.4
Identities = 12/32 (37%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
Frame = -2
Query: 185 FVLFYMESLITADC-LYQSRWPFSTAFCTISF 93
F+ Y+ ++A+C + SR+PF T C I F
Sbjct: 159 FIWDYVSVRVSANCEMDVSRFPFDTQICQIRF 190
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,284,944
Number of Sequences: 27780
Number of extensions: 201996
Number of successful extensions: 616
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 595
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 614
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 892829112
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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