Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmov10i21
         (561 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL021483-7|CAA16344.3|  218|Caenorhabditis elegans Hypothetical ...    29   2.3  
AF106577-5|AAC78192.2|  353|Caenorhabditis elegans Hypothetical ...    28   4.0  
U40799-4|AAA81482.1|  426|Caenorhabditis elegans Hypothetical pr...    28   5.3  
AL031621-2|CAA20934.2| 1000|Caenorhabditis elegans Hypothetical ...    27   7.0  
Z77654-4|CAB01131.2|  151|Caenorhabditis elegans Hypothetical pr...    27   9.2  

>AL021483-7|CAA16344.3|  218|Caenorhabditis elegans Hypothetical
           protein Y38H8A.5 protein.
          Length = 218

 Score = 29.1 bits (62), Expect = 2.3
 Identities = 9/27 (33%), Positives = 18/27 (66%)
 Frame = -1

Query: 327 DYQFSQEGTGRFFCAICEKCFFQFFNI 247
           +++ + E T +F C+IC + F Q +N+
Sbjct: 153 NHRLTHEDTKKFSCSICSRAFHQSYNL 179


>AF106577-5|AAC78192.2|  353|Caenorhabditis elegans Hypothetical
           protein F46F5.14 protein.
          Length = 353

 Score = 28.3 bits (60), Expect = 4.0
 Identities = 10/31 (32%), Positives = 18/31 (58%)
 Frame = +1

Query: 163 LDIQSWWEVPSIAYFCSLFRTAFNLLDFDIE 255
           ++I S W  PS+   C ++   F++LD + E
Sbjct: 6   INISSTWTFPSLFLLCFIYVVVFSILDLNSE 36


>U40799-4|AAA81482.1|  426|Caenorhabditis elegans Hypothetical
           protein F42C5.2 protein.
          Length = 426

 Score = 27.9 bits (59), Expect = 5.3
 Identities = 24/101 (23%), Positives = 46/101 (45%), Gaps = 9/101 (8%)
 Frame = +1

Query: 172 QSWWEVPSIAYFCSLFRTAFNLLDFDIEELEEALLTDGTEESASSLLTELIVRLLNGCL- 348
           +S W +    + C      F +L   I ++++ L  D  EES    +  +  RL++ CL 
Sbjct: 322 KSIWRIAVFHFVCWAPFWGFTMLPNYIYQIDQFLHGDNEEESGGESIFLVYCRLVSNCLP 381

Query: 349 -----GNNDVSAF---NYQMYLRRLFRRKCQETGRYNPFNT 447
                GN  + A    + + ++    ++K + T ++NP NT
Sbjct: 382 YINAAGNWVLYALLNVDVRKHIYNQPKKKRKFTLKFNPVNT 422


>AL031621-2|CAA20934.2| 1000|Caenorhabditis elegans Hypothetical
           protein F28H6.4 protein.
          Length = 1000

 Score = 27.5 bits (58), Expect = 7.0
 Identities = 14/32 (43%), Positives = 22/32 (68%), Gaps = 1/32 (3%)
 Frame = +1

Query: 430 YNPFNTDI-DFQFLPLRTKVEILYALCDFRLD 522
           YN F+  + +F+FL L  KV++ YA+ D R+D
Sbjct: 128 YNFFSKKLHEFRFLTLEEKVDLYYAM-DIRVD 158


>Z77654-4|CAB01131.2|  151|Caenorhabditis elegans Hypothetical
           protein C50B8.4 protein.
          Length = 151

 Score = 27.1 bits (57), Expect = 9.2
 Identities = 11/23 (47%), Positives = 15/23 (65%)
 Frame = +2

Query: 428 GTIPSILTLIFNFCLCGQR*KYY 496
           G +  ++TLIF F LCG+R   Y
Sbjct: 114 GAVLVVITLIFLFVLCGERVTLY 136


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,442,403
Number of Sequences: 27780
Number of extensions: 284869
Number of successful extensions: 650
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 637
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 650
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1155524042
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)