Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmov10i20
(479 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g65360.1 68418.m08221 histone H3 identical to histone H3 from... 234 3e-62
At5g10400.1 68418.m01206 histone H3 identical to several histone... 234 3e-62
At5g10390.1 68418.m01205 histone H3 identical to histone H3 from... 234 3e-62
At3g27360.1 68416.m03421 histone H3 identical to histone H3 from... 234 3e-62
At1g09200.1 68414.m01027 histone H3 identical to histone H3 from... 234 3e-62
At5g10980.1 68418.m01277 histone H3 identical to HISTONE H3.2, M... 233 6e-62
At4g40040.1 68417.m05668 histone H3.2 identical to Histone H3.2,... 233 6e-62
At4g40030.1 68417.m05667 histone H3.2 identical to Histone H3.2,... 233 6e-62
At5g65350.1 68418.m08220 histone H3 nearly identical to histone ... 225 2e-59
At1g75600.1 68414.m08784 histone H3.2, putative strong similarit... 223 4e-59
At1g13370.1 68414.m01554 histone H3, putative strong similarity ... 221 1e-58
At1g19890.1 68414.m02494 histone H3, putative similar to histone... 209 6e-55
At5g12910.1 68418.m01481 histone H3, putative similar to histone... 165 1e-41
At1g01370.1 68414.m00052 centromeric histone H3 HTR12 (HTR12) si... 99 1e-21
At2g33670.1 68415.m04126 seven transmembrane MLO family protein ... 28 2.8
At5g56280.1 68418.m07024 COP9 signalosome subunit 6 / CSN subuni... 27 5.0
At3g07980.1 68416.m00975 protein kinase, putative similar to MAP... 27 6.5
At1g11400.2 68414.m01310 expressed protein 27 6.5
At1g11400.1 68414.m01309 expressed protein 27 6.5
At5g66410.1 68418.m08376 expressed protein 27 8.7
>At5g65360.1 68418.m08221 histone H3 identical to histone H3 from
Zea mays SP|P05203, Medicago sativa GI:166384,
Encephalartos altensteinii SP|P08903, Pisum sativum
SP|P02300; contains Pfam profile PF00125 Core histone
H2A/H2B/H3/H4
Length = 136
Score = 234 bits (572), Expect = 3e-62
Identities = 113/121 (93%), Positives = 119/121 (98%)
Frame = +2
Query: 116 MARTKQTARKSTGGKAPRKQLATKAARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTE 295
MARTKQTARKSTGGKAPRKQLATKAARKSAP+TGGVKKPHR+RPGTVALREIR+YQKSTE
Sbjct: 1 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE 60
Query: 296 LLIRKLPFQRLVREIAQDFKTDLRFQSAAIGALQEASEAYLVGLFEDTXLCAIHAKRVTI 475
LLIRKLPFQRLVREIAQDFKTDLRFQS+A+ ALQEA+EAYLVGLFEDT LCAIHAKRVTI
Sbjct: 61 LLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAYLVGLFEDTNLCAIHAKRVTI 120
Query: 476 M 478
M
Sbjct: 121 M 121
>At5g10400.1 68418.m01206 histone H3 identical to several histone H3
proteins, including Zea mays SP|P05203, Medicago sativa
GI:166384, Encephalartos altensteinii SP|P08903, Pisum
sativum SP|P02300; contains Pfam profile PF00125 Core
histone H2A/H2B/H3/H4
Length = 136
Score = 234 bits (572), Expect = 3e-62
Identities = 113/121 (93%), Positives = 119/121 (98%)
Frame = +2
Query: 116 MARTKQTARKSTGGKAPRKQLATKAARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTE 295
MARTKQTARKSTGGKAPRKQLATKAARKSAP+TGGVKKPHR+RPGTVALREIR+YQKSTE
Sbjct: 1 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE 60
Query: 296 LLIRKLPFQRLVREIAQDFKTDLRFQSAAIGALQEASEAYLVGLFEDTXLCAIHAKRVTI 475
LLIRKLPFQRLVREIAQDFKTDLRFQS+A+ ALQEA+EAYLVGLFEDT LCAIHAKRVTI
Sbjct: 61 LLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAYLVGLFEDTNLCAIHAKRVTI 120
Query: 476 M 478
M
Sbjct: 121 M 121
>At5g10390.1 68418.m01205 histone H3 identical to histone H3 from
Zea mays SP|P05203, Medicago sativa GI:166384,
Encephalartos altensteinii SP|P08903, Pisum sativum
SP|P02300; contains Pfam profile PF00125 Core histone
H2A/H2B/H3/H4
Length = 136
Score = 234 bits (572), Expect = 3e-62
Identities = 113/121 (93%), Positives = 119/121 (98%)
Frame = +2
Query: 116 MARTKQTARKSTGGKAPRKQLATKAARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTE 295
MARTKQTARKSTGGKAPRKQLATKAARKSAP+TGGVKKPHR+RPGTVALREIR+YQKSTE
Sbjct: 1 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE 60
Query: 296 LLIRKLPFQRLVREIAQDFKTDLRFQSAAIGALQEASEAYLVGLFEDTXLCAIHAKRVTI 475
LLIRKLPFQRLVREIAQDFKTDLRFQS+A+ ALQEA+EAYLVGLFEDT LCAIHAKRVTI
Sbjct: 61 LLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAYLVGLFEDTNLCAIHAKRVTI 120
Query: 476 M 478
M
Sbjct: 121 M 121
>At3g27360.1 68416.m03421 histone H3 identical to histone H3 from
Zea mays SP|P05203, Medicago sativa GI:166384,
Encephalartos altensteinii SP|P08903, Pisum sativum
SP|P02300; contains Pfam profile PF00125 Core histone
H2A/H2B/H3/H4
Length = 136
Score = 234 bits (572), Expect = 3e-62
Identities = 113/121 (93%), Positives = 119/121 (98%)
Frame = +2
Query: 116 MARTKQTARKSTGGKAPRKQLATKAARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTE 295
MARTKQTARKSTGGKAPRKQLATKAARKSAP+TGGVKKPHR+RPGTVALREIR+YQKSTE
Sbjct: 1 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE 60
Query: 296 LLIRKLPFQRLVREIAQDFKTDLRFQSAAIGALQEASEAYLVGLFEDTXLCAIHAKRVTI 475
LLIRKLPFQRLVREIAQDFKTDLRFQS+A+ ALQEA+EAYLVGLFEDT LCAIHAKRVTI
Sbjct: 61 LLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAYLVGLFEDTNLCAIHAKRVTI 120
Query: 476 M 478
M
Sbjct: 121 M 121
>At1g09200.1 68414.m01027 histone H3 identical to histone H3 from
Zea mays SP|P05203, Medicago sativa GI:166384,
Encephalartos altensteinii SP|P08903, Pisum sativum
SP|P02300; contains Pfam profile PF00125 Core histone
H2A/H2B/H3/H4
Length = 136
Score = 234 bits (572), Expect = 3e-62
Identities = 113/121 (93%), Positives = 119/121 (98%)
Frame = +2
Query: 116 MARTKQTARKSTGGKAPRKQLATKAARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTE 295
MARTKQTARKSTGGKAPRKQLATKAARKSAP+TGGVKKPHR+RPGTVALREIR+YQKSTE
Sbjct: 1 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTE 60
Query: 296 LLIRKLPFQRLVREIAQDFKTDLRFQSAAIGALQEASEAYLVGLFEDTXLCAIHAKRVTI 475
LLIRKLPFQRLVREIAQDFKTDLRFQS+A+ ALQEA+EAYLVGLFEDT LCAIHAKRVTI
Sbjct: 61 LLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAYLVGLFEDTNLCAIHAKRVTI 120
Query: 476 M 478
M
Sbjct: 121 M 121
>At5g10980.1 68418.m01277 histone H3 identical to HISTONE H3.2,
MINOR, Medicago sativa, SWISSPROT:P11105, histone H3
variant H3.3 Lycopersicon esculentum GI:1435157;
contains Pfam profile PF00125 Core histone H2A/H2B/H3/H4
Length = 136
Score = 233 bits (569), Expect = 6e-62
Identities = 114/121 (94%), Positives = 118/121 (97%)
Frame = +2
Query: 116 MARTKQTARKSTGGKAPRKQLATKAARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTE 295
MARTKQTARKSTGGKAPRKQLATKAARKSAP+TGGVKKPHRYRPGTVALREIR+YQKSTE
Sbjct: 1 MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTE 60
Query: 296 LLIRKLPFQRLVREIAQDFKTDLRFQSAAIGALQEASEAYLVGLFEDTXLCAIHAKRVTI 475
LLIRKLPFQRLVREIAQDFKTDLRFQS A+ ALQEA+EAYLVGLFEDT LCAIHAKRVTI
Sbjct: 61 LLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTI 120
Query: 476 M 478
M
Sbjct: 121 M 121
>At4g40040.1 68417.m05668 histone H3.2 identical to Histone H3.2,
minor Lolium temulentum SP|P11105, nearly identical to
histone H3.2 Mus pahari GI:515005; contains Pfam profile
PF00125 Core histone H2A/H2B/H3/H4
Length = 136
Score = 233 bits (569), Expect = 6e-62
Identities = 114/121 (94%), Positives = 118/121 (97%)
Frame = +2
Query: 116 MARTKQTARKSTGGKAPRKQLATKAARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTE 295
MARTKQTARKSTGGKAPRKQLATKAARKSAP+TGGVKKPHRYRPGTVALREIR+YQKSTE
Sbjct: 1 MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTE 60
Query: 296 LLIRKLPFQRLVREIAQDFKTDLRFQSAAIGALQEASEAYLVGLFEDTXLCAIHAKRVTI 475
LLIRKLPFQRLVREIAQDFKTDLRFQS A+ ALQEA+EAYLVGLFEDT LCAIHAKRVTI
Sbjct: 61 LLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTI 120
Query: 476 M 478
M
Sbjct: 121 M 121
>At4g40030.1 68417.m05667 histone H3.2 identical to Histone H3.2,
minor Lolium temulentum SP|P11105, nearly identical to
histone H3.2 Mus pahari GI:515005; contains Pfam profile
PF00125 Core histone H2A/H2B/H3/H4
Length = 136
Score = 233 bits (569), Expect = 6e-62
Identities = 114/121 (94%), Positives = 118/121 (97%)
Frame = +2
Query: 116 MARTKQTARKSTGGKAPRKQLATKAARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTE 295
MARTKQTARKSTGGKAPRKQLATKAARKSAP+TGGVKKPHRYRPGTVALREIR+YQKSTE
Sbjct: 1 MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTE 60
Query: 296 LLIRKLPFQRLVREIAQDFKTDLRFQSAAIGALQEASEAYLVGLFEDTXLCAIHAKRVTI 475
LLIRKLPFQRLVREIAQDFKTDLRFQS A+ ALQEA+EAYLVGLFEDT LCAIHAKRVTI
Sbjct: 61 LLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTI 120
Query: 476 M 478
M
Sbjct: 121 M 121
>At5g65350.1 68418.m08220 histone H3 nearly identical to histone H3
from Zea mays SP|P05203, Medicago sativa GI:166384,
Encephalartos altensteinii SP|P08903, Pisum sativum
SP|P02300; contains Pfam profile PF00125 Core histone
H2A/H2B/H3/H4
Length = 139
Score = 225 bits (549), Expect = 2e-59
Identities = 108/121 (89%), Positives = 117/121 (96%)
Frame = +2
Query: 116 MARTKQTARKSTGGKAPRKQLATKAARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTE 295
MARTKQTAR STGGKAPRKQLA KAAR+SAP+TGGVKKPHR+RPGTVALR+IR+YQKSTE
Sbjct: 1 MARTKQTARISTGGKAPRKQLAPKAARQSAPATGGVKKPHRFRPGTVALRDIRKYQKSTE 60
Query: 296 LLIRKLPFQRLVREIAQDFKTDLRFQSAAIGALQEASEAYLVGLFEDTXLCAIHAKRVTI 475
+LIRKLPFQRLVREIAQDFKTDLRFQS+A+ ALQEA+EAYLVGLFEDT LCAIHAKRVTI
Sbjct: 61 ILIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAYLVGLFEDTNLCAIHAKRVTI 120
Query: 476 M 478
M
Sbjct: 121 M 121
>At1g75600.1 68414.m08784 histone H3.2, putative strong similarity
to histone H3.2 SP|P11105 GI:417103 from Lolium
temulentum, histone H3.2 from Mus pahari GI:515005;
contains Pfam profile PF00125 Core histone H2A/H2B/H3/H4
Length = 136
Score = 223 bits (546), Expect = 4e-59
Identities = 110/121 (90%), Positives = 115/121 (95%)
Frame = +2
Query: 116 MARTKQTARKSTGGKAPRKQLATKAARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTE 295
MARTKQTARKS GGKAPR LATKAARKSAP+TGGVKKPHRYRPGTVALREIR+YQKSTE
Sbjct: 1 MARTKQTARKSHGGKAPRTLLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTE 60
Query: 296 LLIRKLPFQRLVREIAQDFKTDLRFQSAAIGALQEASEAYLVGLFEDTXLCAIHAKRVTI 475
LLIRKLPFQRLVREIAQD+KTDLRFQS A+ ALQEA+EAYLVGLFEDT LCAIHAKRVTI
Sbjct: 61 LLIRKLPFQRLVREIAQDYKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTI 120
Query: 476 M 478
M
Sbjct: 121 M 121
>At1g13370.1 68414.m01554 histone H3, putative strong similarity to
Histone H3.2, minor Medicago sativa SP|P11105, histone
H3 Rubus idaeus GI:10732809; contains Pfam profile
PF00125 Core histone H2A/H2B/H3/H4
Length = 136
Score = 221 bits (541), Expect = 1e-58
Identities = 109/121 (90%), Positives = 115/121 (95%)
Frame = +2
Query: 116 MARTKQTARKSTGGKAPRKQLATKAARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTE 295
MARTKQ+ARKS GGKAP KQLATKAARKSAP+TGGVKKPHR+RPGTVALREIR+YQKSTE
Sbjct: 1 MARTKQSARKSHGGKAPTKQLATKAARKSAPTTGGVKKPHRFRPGTVALREIRKYQKSTE 60
Query: 296 LLIRKLPFQRLVREIAQDFKTDLRFQSAAIGALQEASEAYLVGLFEDTXLCAIHAKRVTI 475
LL RKLPFQRLVREIAQDFKTDLRFQS A+ ALQEA+EAYLVGLFEDT LCAIHAKRVTI
Sbjct: 61 LLNRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTI 120
Query: 476 M 478
M
Sbjct: 121 M 121
>At1g19890.1 68414.m02494 histone H3, putative similar to histone H3
from Chlamydomonas reinhardtii GI:571470, Volvox carteri
SP|P08437, histone H3.2 minor from Lolium temulentum
SP|P11105; contains Pfam profile PF00125 Core histone
H2A/H2B/H3/H4
Length = 137
Score = 209 bits (511), Expect = 6e-55
Identities = 104/122 (85%), Positives = 112/122 (91%), Gaps = 1/122 (0%)
Frame = +2
Query: 116 MARTKQTARKSTGGKAPRKQLATKAARKSA-PSTGGVKKPHRYRPGTVALREIRRYQKST 292
MARTKQTARKSTGGK PRK+LATKAARK+ P GGVK+ HR+RPGTVALREIR+YQKST
Sbjct: 1 MARTKQTARKSTGGKGPRKELATKAARKTRRPYRGGVKRAHRFRPGTVALREIRKYQKST 60
Query: 293 ELLIRKLPFQRLVREIAQDFKTDLRFQSAAIGALQEASEAYLVGLFEDTXLCAIHAKRVT 472
+LLIRKLPFQRLVREIAQDFK DLRFQS A+ ALQEA+EAYLVGLFEDT LCAIHAKRVT
Sbjct: 61 DLLIRKLPFQRLVREIAQDFKVDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVT 120
Query: 473 IM 478
IM
Sbjct: 121 IM 122
>At5g12910.1 68418.m01481 histone H3, putative similar to histone H3
from Mus musculus GI:51301, Gallus gallus GI:211859,
Medicago sativa GI:166384, Pisum sativum SP|P02300;
contains Pfam profile PF00125 Core histone H2A/H2B/H3/H4
Length = 131
Score = 165 bits (402), Expect = 1e-41
Identities = 81/121 (66%), Positives = 100/121 (82%)
Frame = +2
Query: 116 MARTKQTARKSTGGKAPRKQLATKAARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTE 295
MAR+ QTARK+TGGKAP A + + S P +KKP+RY+PGTVALREIR+YQK+T+
Sbjct: 1 MARSNQTARKATGGKAPH--FAMRVWQHSTPP---LKKPYRYKPGTVALREIRKYQKTTD 55
Query: 296 LLIRKLPFQRLVREIAQDFKTDLRFQSAAIGALQEASEAYLVGLFEDTXLCAIHAKRVTI 475
L+IRKLPFQRLV+EIAQ K DLRFQ+ A+ ALQEA+EA++VG+FEDT LCA+HAKR TI
Sbjct: 56 LVIRKLPFQRLVKEIAQSLKADLRFQTGAVSALQEAAEAFMVGMFEDTNLCAMHAKRSTI 115
Query: 476 M 478
M
Sbjct: 116 M 116
>At1g01370.1 68414.m00052 centromeric histone H3 HTR12 (HTR12)
similar to histone H3 GB:X17141 GI:10795 from
Tetrahymena pyriformis, GI:161790 from Tetrahymena
thermophila; contains Pfam profile PF00125 Core histone
H2A/H2B/H3/H4
Length = 178
Score = 99.1 bits (236), Expect = 1e-21
Identities = 58/120 (48%), Positives = 75/120 (62%), Gaps = 2/120 (1%)
Frame = +2
Query: 125 TKQTARKSTGGKAPRKQLATKAARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTELLI 304
T+QT ++ R+ K +R++ P G KK +RYRPGTVAL+EIR +QK T LLI
Sbjct: 45 TQQTNPTTSPATGTRR--GAKRSRQAMPR-GSQKKSYRYRPGTVALKEIRHFQKQTNLLI 101
Query: 305 RKLPFQRLVREIAQDFKTDL--RFQSAAIGALQEASEAYLVGLFEDTXLCAIHAKRVTIM 478
F R VR I R+ + A+ ALQEA+E YLVGLF D+ LCAIHA+RVT+M
Sbjct: 102 PAASFIREVRSITHMLAPPQINRWTAEALVALQEAAEDYLVGLFSDSMLCAIHARRVTLM 161
>At2g33670.1 68415.m04126 seven transmembrane MLO family protein /
MLO-like protein 5 (MLO5) identical to MLO-like protein
5 (AtMlo5) [Arabidopsis thaliana] SWISS-PROT:O22815;
similar to MLO protein SWISS-PROT:P93766,
NCBI_gi:1877221 [Hordeum vulgare][Barley]
Length = 501
Score = 28.3 bits (60), Expect = 2.8
Identities = 11/30 (36%), Positives = 17/30 (56%)
Frame = -3
Query: 180 ASCLRGALPPVDLRAVCLVRAIVYFFNVFH 91
A C +G +P + L A+ V ++F VFH
Sbjct: 132 AQCKKGYVPLISLNALHQVHIFIFFLAVFH 161
>At5g56280.1 68418.m07024 COP9 signalosome subunit 6 / CSN subunit 6
(CSN6A) identical to CSN complex subunit 6A [Arabidopsis
thaliana] GI:18056665, COP9 complex subunit 6
[Arabidopsis thaliana] GI:15809663; contains Pfam
profile PF01398: Mov34/MPN/PAD-1 family; identical to
cDNA CSN complex subunit 6A (CSN6A) GI:18056664
Length = 317
Score = 27.5 bits (58), Expect = 5.0
Identities = 15/44 (34%), Positives = 23/44 (52%)
Frame = -2
Query: 427 QANEISLACLLESSDGGRLETQISFEILSDFSHKTLERQLTDKQ 296
Q N C++ G +E SFE+L D S +TL+R +K+
Sbjct: 53 QQNPRVYGCVIGVQRGRTVEIFNSFELLYDPSTQTLDRSFLEKK 96
>At3g07980.1 68416.m00975 protein kinase, putative similar to MAP3K
epsilon protein kinase [Arabidopsis thaliana]
gi|3549652|emb|CAA12272
Length = 1367
Score = 27.1 bits (57), Expect = 6.5
Identities = 17/45 (37%), Positives = 23/45 (51%)
Frame = +3
Query: 72 KISSLTCEKH*KSKQWLVLNKQPVNLLEVKLRVNNLLQKRRENQR 206
K+ EKH K KQ +V N P L NL+++RR+ QR
Sbjct: 1306 KLIKAVYEKHPKPKQLIVENDLPQKL-------QNLIEERRDGQR 1343
>At1g11400.2 68414.m01310 expressed protein
Length = 204
Score = 27.1 bits (57), Expect = 6.5
Identities = 12/36 (33%), Positives = 20/36 (55%)
Frame = +2
Query: 215 GGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQ 322
G ++KP R RPG E+ +YQ L+ +++ Q
Sbjct: 34 GTLRKPIRIRPGYTPEDEVVKYQSKGSLMKKEMASQ 69
>At1g11400.1 68414.m01309 expressed protein
Length = 204
Score = 27.1 bits (57), Expect = 6.5
Identities = 12/36 (33%), Positives = 20/36 (55%)
Frame = +2
Query: 215 GGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQ 322
G ++KP R RPG E+ +YQ L+ +++ Q
Sbjct: 34 GTLRKPIRIRPGYTPEDEVVKYQSKGSLMKKEMASQ 69
>At5g66410.1 68418.m08376 expressed protein
Length = 230
Score = 26.6 bits (56), Expect = 8.7
Identities = 15/59 (25%), Positives = 27/59 (45%)
Frame = +2
Query: 302 IRKLPFQRLVREIAQDFKTDLRFQSAAIGALQEASEAYLVGLFEDTXLCAIHAKRVTIM 478
+ L F ++ A+D+K ++ A G+ E L L +D L +HA R+ +
Sbjct: 10 LSNLAFGNVLAAAARDYKKEVLANEKAQGSRPVNEEVDLDELMDDPELEKLHADRIAAL 68
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,542,831
Number of Sequences: 28952
Number of extensions: 172802
Number of successful extensions: 528
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 519
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 525
length of database: 12,070,560
effective HSP length: 76
effective length of database: 9,870,208
effective search space used: 819227264
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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