Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmov10i19
(543 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P09012 Cluster: U1 small nuclear ribonucleoprotein A; n... 133 3e-30
UniRef50_P08579 Cluster: U2 small nuclear ribonucleoprotein B'';... 130 2e-29
UniRef50_Q1WCL9 Cluster: Small nuclear ribonucleoprotein polypep... 129 5e-29
UniRef50_P43332 Cluster: U1 small nuclear ribonucleoprotein A; n... 129 5e-29
UniRef50_Q5BXV2 Cluster: SJCHGC09182 protein; n=1; Schistosoma j... 116 3e-25
UniRef50_Q21323 Cluster: Rnp (Rrm rna binding domain) containing... 107 2e-22
UniRef50_Q5DD61 Cluster: SJCHGC05726 protein; n=2; Bilateria|Rep... 102 5e-21
UniRef50_A3AH19 Cluster: Putative uncharacterized protein; n=2; ... 96 5e-19
UniRef50_Q54J05 Cluster: U2 small nuclear ribonucleoprotein B; n... 93 4e-18
UniRef50_A1CE39 Cluster: RNA binding domain protein; n=6; Pezizo... 92 7e-18
UniRef50_Q0UXL2 Cluster: Putative uncharacterized protein; n=1; ... 88 1e-16
UniRef50_O74968 Cluster: U1 snRNP-associated protein Usp102; n=1... 84 2e-15
UniRef50_Q01EK0 Cluster: U2snrB small nuclear ribonucleoprotein ... 83 3e-15
UniRef50_Q5YES2 Cluster: Small nuclear ribonucleoprotein; n=1; B... 79 5e-14
UniRef50_Q1JSG9 Cluster: Rnp (Rrm rna binding domain) containing... 79 9e-14
UniRef50_Q22CK3 Cluster: U1 small nuclear ribonucleoprotein A; n... 75 8e-13
UniRef50_UPI00004983FC Cluster: U1snRNP-specific protein; n=1; E... 74 2e-12
UniRef50_Q4WNG1 Cluster: U1 small nuclear ribonucleoprotein A, p... 74 2e-12
UniRef50_A7AN41 Cluster: U2 small nuclear ribonucleoprotein B', ... 73 3e-12
UniRef50_Q7LL14 Cluster: Probable U2 small nuclear ribonucleopro... 72 8e-12
UniRef50_Q4UD23 Cluster: U1 snRNP protein, putative; n=1; Theile... 71 1e-11
UniRef50_Q4P2S8 Cluster: Putative uncharacterized protein; n=1; ... 71 1e-11
UniRef50_A0DWP2 Cluster: Chromosome undetermined scaffold_67, wh... 71 2e-11
UniRef50_A1CBE1 Cluster: Small nuclear ribonucleoprotein U1a,U2b... 71 2e-11
UniRef50_Q7RD14 Cluster: U1 small nuclear ribonucleoprotein a; n... 70 3e-11
UniRef50_UPI0001509B9E Cluster: U1 small nuclear ribonucleoprote... 69 5e-11
UniRef50_Q6CVJ3 Cluster: Kluyveromyces lactis strain NRRL Y-1140... 69 7e-11
UniRef50_Q6BWJ3 Cluster: Similar to sp|P09012 Homo sapiens U1 sm... 69 9e-11
UniRef50_A7ANK4 Cluster: U2 small nuclear ribonucleoprotein B', ... 68 2e-10
UniRef50_A3LPV2 Cluster: Predicted protein; n=2; Pichia|Rep: Pre... 67 2e-10
UniRef50_Q8I2G9 Cluster: Small nuclear ribonucleoprotein (SnRNP)... 66 4e-10
UniRef50_Q5A4F9 Cluster: Putative uncharacterized protein USA1; ... 65 1e-09
UniRef50_Q6C824 Cluster: Similar to tr|Q41499 Solanum tuberosum ... 64 2e-09
UniRef50_A0DPF4 Cluster: Chromosome undetermined scaffold_59, wh... 63 5e-09
UniRef50_Q6BW78 Cluster: Similar to tr|O74968 Schizosaccharomyce... 62 6e-09
UniRef50_Q75EQ7 Cluster: AAR022Wp; n=2; Saccharomycetaceae|Rep: ... 60 2e-08
UniRef50_Q5KMQ5 Cluster: Putative uncharacterized protein; n=1; ... 60 3e-08
UniRef50_A5DEK8 Cluster: Putative uncharacterized protein; n=1; ... 58 1e-07
UniRef50_A2DS99 Cluster: Putative uncharacterized protein; n=1; ... 58 2e-07
UniRef50_A5DSN5 Cluster: Putative uncharacterized protein; n=1; ... 56 5e-07
UniRef50_A3LPR6 Cluster: Predicted protein; n=3; Saccharomycetal... 56 5e-07
UniRef50_Q5K7D5 Cluster: RNA binding protein, putative; n=1; Fil... 55 1e-06
UniRef50_Q4PGF6 Cluster: Putative uncharacterized protein; n=1; ... 54 2e-06
UniRef50_P40567 Cluster: U2 small nuclear ribonucleoprotein B'';... 53 4e-06
UniRef50_A2FJ46 Cluster: Putative uncharacterized protein; n=1; ... 53 5e-06
UniRef50_Q57XJ8 Cluster: U2 small nuclear ribonucleoprotein B, p... 52 9e-06
UniRef50_Q22GW9 Cluster: Polypyrimidine tract-binding protein; n... 51 2e-05
UniRef50_A5DZH8 Cluster: Putative uncharacterized protein; n=1; ... 48 2e-04
UniRef50_Q6C8A0 Cluster: Similar to tr|O74968 Schizosaccharomyce... 47 2e-04
UniRef50_Q5CXS1 Cluster: U1 small nuclear ribonucleoprotein A, r... 47 3e-04
UniRef50_Q6FKR0 Cluster: Similarity; n=1; Candida glabrata|Rep: ... 46 6e-04
UniRef50_Q4RFZ2 Cluster: Chromosome undetermined SCAF15108, whol... 45 0.001
UniRef50_Q6E6F7 Cluster: U1 small ribonucleoprotein; n=1; Antono... 45 0.001
UniRef50_UPI0000DB7787 Cluster: PREDICTED: similar to RNA-bindin... 44 0.002
UniRef50_Q4U9D6 Cluster: RNA binding protein, putative; n=2; The... 43 0.004
UniRef50_UPI00006A0975 Cluster: RNA-binding region (RNP1, RRM) c... 43 0.005
UniRef50_A3AHI9 Cluster: Putative uncharacterized protein; n=1; ... 43 0.005
UniRef50_Q6CEQ5 Cluster: Similarities with tr|Q8ITY4 Caenorhabdi... 43 0.005
UniRef50_Q55CC1 Cluster: Putative uncharacterized protein; n=1; ... 42 0.007
UniRef50_UPI00015B592F Cluster: PREDICTED: hypothetical protein;... 42 0.012
UniRef50_Q503D7 Cluster: Zgc:110682; n=2; Danio rerio|Rep: Zgc:1... 42 0.012
UniRef50_UPI0000E80292 Cluster: PREDICTED: similar to RNA bindin... 41 0.016
UniRef50_A7QHK2 Cluster: Chromosome chr5 scaffold_98, whole geno... 41 0.021
UniRef50_Q6IRQ4 Cluster: MGC82187 protein; n=6; Tetrapoda|Rep: M... 40 0.028
UniRef50_Q14011 Cluster: Cold-inducible RNA-binding protein; n=6... 40 0.028
UniRef50_Q4N8H4 Cluster: RNA-binding protein, putative; n=2; The... 39 0.065
UniRef50_A7RZI8 Cluster: Predicted protein; n=1; Nematostella ve... 39 0.065
UniRef50_A4H9C2 Cluster: Putative uncharacterized protein; n=2; ... 39 0.065
UniRef50_Q96JI8 Cluster: KIAA1839 protein; n=28; Euteleostomi|Re... 39 0.065
UniRef50_A5DY14 Cluster: Putative uncharacterized protein; n=1; ... 39 0.065
UniRef50_Q8MLU3 Cluster: CG30327-PA; n=2; Drosophila melanogaste... 38 0.11
UniRef50_Q5TWC9 Cluster: ENSANGP00000026708; n=1; Anopheles gamb... 38 0.11
UniRef50_Q5CRM8 Cluster: T8M16_190-plant like protein with RRM d... 38 0.11
UniRef50_Q4QE24 Cluster: Putative uncharacterized protein; n=4; ... 38 0.11
UniRef50_Q4MZ00 Cluster: Splicing factor, putative; n=2; Theiler... 38 0.11
UniRef50_Q4PBP1 Cluster: Putative uncharacterized protein; n=1; ... 38 0.11
UniRef50_Q66IT0 Cluster: MGC84815 protein; n=1; Xenopus laevis|R... 38 0.15
UniRef50_Q4YUU2 Cluster: Cyclophilin, putative; n=4; Plasmodium|... 38 0.15
UniRef50_Q6ZR81 Cluster: CDNA FLJ46566 fis, clone THYMU3040829, ... 38 0.15
UniRef50_UPI0000498E5C Cluster: RNA-binding protein; n=1; Entamo... 38 0.20
UniRef50_Q1LV83 Cluster: Novel protein; n=4; Danio rerio|Rep: No... 38 0.20
UniRef50_Q6ID24 Cluster: At4g12630; n=6; Arabidopsis thaliana|Re... 38 0.20
UniRef50_Q6C3A0 Cluster: Similarity; n=1; Yarrowia lipolytica|Re... 38 0.20
UniRef50_Q4KLD9 Cluster: MGC116464 protein; n=1; Xenopus laevis|... 37 0.26
UniRef50_Q387J8 Cluster: RNA-binding protein, putative; n=3; Try... 37 0.26
UniRef50_A5K2K1 Cluster: RNA-binding protein, putative; n=8; Pla... 37 0.26
UniRef50_A7TFW1 Cluster: Putative uncharacterized protein; n=1; ... 37 0.26
UniRef50_A7NYH5 Cluster: Chromosome chr6 scaffold_3, whole genom... 37 0.35
UniRef50_Q4QA88 Cluster: Poly(A)-binding protein, putative; n=3;... 37 0.35
UniRef50_A2DSN3 Cluster: Putative uncharacterized protein; n=1; ... 37 0.35
UniRef50_Q5KBA9 Cluster: Putative uncharacterized protein; n=1; ... 36 0.46
UniRef50_Q01560 Cluster: Nucleolar protein 3; n=7; Fungi/Metazoa... 36 0.46
UniRef50_O83375 Cluster: RNA-binding protein, putative; n=1; Tre... 36 0.60
UniRef50_Q6FIQ5 Cluster: Candida glabrata strain CBS138 chromoso... 36 0.60
UniRef50_Q9FXE0 Cluster: F12A21.10; n=1; Arabidopsis thaliana|Re... 36 0.80
UniRef50_Q014L5 Cluster: Cyclophilin-type peptidyl-prolyl cis-tr... 36 0.80
UniRef50_Q7RNK1 Cluster: Ribonucleoprotein homolog F21B7.26-Arab... 36 0.80
UniRef50_Q7R663 Cluster: GLP_574_154581_155147; n=1; Giardia lam... 36 0.80
UniRef50_Q18318 Cluster: Putative uncharacterized protein C30B5.... 36 0.80
UniRef50_A7EXD1 Cluster: Putative uncharacterized protein; n=3; ... 36 0.80
UniRef50_A7PHW6 Cluster: Chromosome chr13 scaffold_17, whole gen... 35 1.1
UniRef50_Q8IS70 Cluster: Nucleolin-like protein; n=1; Euprymna s... 35 1.1
UniRef50_Q86AS4 Cluster: Similar to Dictyostelium discoideum (Sl... 35 1.1
UniRef50_Q4N0S1 Cluster: Putative uncharacterized protein; n=1; ... 35 1.1
UniRef50_Q759G9 Cluster: ADR307Wp; n=1; Eremothecium gossypii|Re... 35 1.1
UniRef50_Q14498 Cluster: RNA-binding protein 39; n=55; Euteleost... 35 1.1
UniRef50_Q5BSD0 Cluster: SJCHGC05002 protein; n=1; Schistosoma j... 35 1.4
UniRef50_Q8ILQ0 Cluster: Spliceosome-associated protein, putativ... 34 1.8
UniRef50_Q57WD0 Cluster: RNA-binding protein, putative; n=1; Try... 34 1.8
UniRef50_Q4D4H5 Cluster: Putative uncharacterized protein; n=2; ... 34 1.8
UniRef50_Q6FSA7 Cluster: Candida glabrata strain CBS138 chromoso... 34 1.8
UniRef50_Q6CUE4 Cluster: Kluyveromyces lactis strain NRRL Y-1140... 34 1.8
UniRef50_A1C5Y9 Cluster: Pre-mRNA branch site protein p14, putat... 34 1.8
UniRef50_UPI00015B552E Cluster: PREDICTED: similar to bruno; n=1... 34 2.4
UniRef50_UPI0000E45C64 Cluster: PREDICTED: similar to RNA-bindin... 34 2.4
UniRef50_UPI00006CB38A Cluster: polypyrimidine tract binding pro... 34 2.4
UniRef50_Q4RXM3 Cluster: Chromosome 11 SCAF14979, whole genome s... 34 2.4
UniRef50_A7QYR4 Cluster: Chromosome chr5 scaffold_253, whole gen... 34 2.4
UniRef50_A2XN97 Cluster: Putative uncharacterized protein; n=3; ... 34 2.4
UniRef50_Q8ILZ7 Cluster: Putative uncharacterized protein; n=1; ... 34 2.4
UniRef50_Q54NB8 Cluster: RNA-binding region-containing protein; ... 34 2.4
UniRef50_Q4QI27 Cluster: RNA-binding protein 5-like protein; n=3... 34 2.4
UniRef50_Q16MW3 Cluster: RNA recognition motif protein split end... 34 2.4
UniRef50_A7AMD5 Cluster: Splicing factor, CC1-like family protei... 34 2.4
UniRef50_A3FQ28 Cluster: Putative uncharacterized protein; n=1; ... 34 2.4
UniRef50_Q9Y7A8 Cluster: Pad-1; n=18; Pezizomycotina|Rep: Pad-1 ... 34 2.4
UniRef50_Q6C747 Cluster: Yarrowia lipolytica chromosome E of str... 34 2.4
UniRef50_A2QQZ9 Cluster: Similarity to oligouridylate binding pr... 34 2.4
UniRef50_A7AWK7 Cluster: RNA recognition motif. (A.k.a. RRM, RBD... 33 3.2
UniRef50_A0CCX3 Cluster: Chromosome undetermined scaffold_169, w... 33 3.2
UniRef50_Q6NV05 Cluster: Zgc:85696; n=7; Clupeocephala|Rep: Zgc:... 33 4.3
UniRef50_Q54G90 Cluster: Putative uncharacterized protein; n=1; ... 33 4.3
UniRef50_A4V6N1 Cluster: HnRNP A2/B1 protein; n=1; Dugesia japon... 33 4.3
UniRef50_A2E1S1 Cluster: Putative uncharacterized protein; n=1; ... 33 4.3
UniRef50_A0BZZ4 Cluster: Chromosome undetermined scaffold_14, wh... 33 4.3
UniRef50_Q6BMT1 Cluster: Similar to CA5935|IPF2798 Candida albic... 33 4.3
UniRef50_Q9Y580 Cluster: RNA-binding protein 7; n=27; Tetrapoda|... 33 4.3
UniRef50_Q5U3Q9 Cluster: Zgc:101754; n=4; Clupeocephala|Rep: Zgc... 33 5.6
UniRef50_Q69VQ4 Cluster: RNA recognition motif (RRM)-containing ... 33 5.6
UniRef50_Q019A8 Cluster: Molecular chaperone; n=2; Ostreococcus|... 33 5.6
UniRef50_Q7R8I3 Cluster: Drosophila melanogaster RE19804p-relate... 33 5.6
UniRef50_Q5CYN8 Cluster: Nop15p/nopp34; nucleolar protein with 1... 33 5.6
UniRef50_Q4N5B6 Cluster: Spliceosome associated protein, putativ... 33 5.6
UniRef50_Q20084 Cluster: Putative uncharacterized protein exc-7;... 33 5.6
UniRef50_Q6FMN2 Cluster: Candida glabrata strain CBS138 chromoso... 33 5.6
UniRef50_Q6CJZ1 Cluster: Kluyveromyces lactis strain NRRL Y-1140... 33 5.6
UniRef50_Q4PI99 Cluster: Putative uncharacterized protein; n=1; ... 33 5.6
UniRef50_A7EK71 Cluster: Putative uncharacterized protein; n=1; ... 33 5.6
UniRef50_Q96IZ5 Cluster: RNA-binding protein 41; n=29; Amniota|R... 33 5.6
UniRef50_Q4RJP2 Cluster: Chromosome 13 SCAF15035, whole genome s... 32 7.4
UniRef50_Q986X2 Cluster: ABC transporter, permease protein; n=2;... 32 7.4
UniRef50_A7HWJ5 Cluster: Activator of Hsp90 ATPase 1 family prot... 32 7.4
UniRef50_Q9M9E6 Cluster: F3F9.20; n=8; Arabidopsis thaliana|Rep:... 32 7.4
UniRef50_Q10N87 Cluster: Polyadenylate binding protein, types 1,... 32 7.4
UniRef50_Q23YD9 Cluster: RNA binding protein; n=2; Alveolata|Rep... 32 7.4
UniRef50_A7RXI1 Cluster: Predicted protein; n=1; Nematostella ve... 32 7.4
UniRef50_Q6BYW3 Cluster: Debaryomyces hansenii chromosome A of s... 32 7.4
UniRef50_Q6BUC2 Cluster: Similar to Tr|Q06106 Saccharomyces cere... 32 7.4
UniRef50_Q6BMQ4 Cluster: Similar to sp|P38741 Saccharomyces cere... 32 7.4
UniRef50_A3LZJ7 Cluster: Predicted protein; n=2; Pichia|Rep: Pre... 32 7.4
UniRef50_UPI00005A408C Cluster: PREDICTED: similar to RNA bindin... 32 9.8
UniRef50_Q4T2S2 Cluster: Chromosome undetermined SCAF10201, whol... 32 9.8
UniRef50_A1SSM5 Cluster: RNP-1 like RNA-binding protein precurso... 32 9.8
UniRef50_Q945S0 Cluster: U2 auxiliary factor small subunit; n=3;... 32 9.8
UniRef50_A4S763 Cluster: Predicted protein; n=1; Ostreococcus lu... 32 9.8
UniRef50_Q7R479 Cluster: GLP_480_99804_101795; n=1; Giardia lamb... 32 9.8
UniRef50_Q4DSQ8 Cluster: RNA-binding protein, putative; n=2; Try... 32 9.8
UniRef50_Q382W9 Cluster: RNA-binding protein, putative; n=1; Try... 32 9.8
UniRef50_A3FQM3 Cluster: RNA binding protein, putative; n=2; Cry... 32 9.8
UniRef50_A2EGG1 Cluster: Putative uncharacterized protein; n=1; ... 32 9.8
UniRef50_A2D9U4 Cluster: Putative uncharacterized protein; n=1; ... 32 9.8
UniRef50_Q750E5 Cluster: AGR010Cp; n=2; Saccharomycetaceae|Rep: ... 32 9.8
>UniRef50_P09012 Cluster: U1 small nuclear ribonucleoprotein A;
n=35; Euteleostomi|Rep: U1 small nuclear
ribonucleoprotein A - Homo sapiens (Human)
Length = 282
Score = 133 bits (321), Expect = 3e-30
Identities = 65/91 (71%), Positives = 71/91 (78%)
Frame = +3
Query: 195 DIRPNHTIYXXXXXXXXXXXXXXXSLYAIFSQFGQILDIVAMKTLKMRGQAFVIFKEISS 374
+ RPNHTIY SLYAIFSQFGQILDI+ ++LKMRGQAFVIFKE+SS
Sbjct: 5 ETRPNHTIYINNLNEKIKKDELKKSLYAIFSQFGQILDILVSRSLKMRGQAFVIFKEVSS 64
Query: 375 ATVALRSMQGFPFYDKPMRIQYSKIDSDIIA 467
AT ALRSMQGFPFYDKPMRIQY+K DSDIIA
Sbjct: 65 ATNALRSMQGFPFYDKPMRIQYAKTDSDIIA 95
>UniRef50_P08579 Cluster: U2 small nuclear ribonucleoprotein B'';
n=19; Mammalia|Rep: U2 small nuclear ribonucleoprotein
B'' - Homo sapiens (Human)
Length = 225
Score = 130 bits (314), Expect = 2e-29
Identities = 61/92 (66%), Positives = 71/92 (77%)
Frame = +3
Query: 192 MDIRPNHTIYXXXXXXXXXXXXXXXSLYAIFSQFGQILDIVAMKTLKMRGQAFVIFKEIS 371
MDIRPNHTIY SLYA+FSQFG ++DIVA+KT+KMRGQAFVIFKE+
Sbjct: 1 MDIRPNHTIYINNMNDKIKKEELKRSLYALFSQFGHVVDIVALKTMKMRGQAFVIFKELG 60
Query: 372 SATVALRSMQGFPFYDKPMRIQYSKIDSDIIA 467
S+T ALR +QGFPFY KPMRIQY+K DSDII+
Sbjct: 61 SSTNALRQLQGFPFYGKPMRIQYAKTDSDIIS 92
>UniRef50_Q1WCL9 Cluster: Small nuclear ribonucleoprotein
polypeptide A; n=2; Euteleostomi|Rep: Small nuclear
ribonucleoprotein polypeptide A - Ictalurus punctatus
(Channel catfish)
Length = 156
Score = 129 bits (311), Expect = 5e-29
Identities = 63/93 (67%), Positives = 72/93 (77%)
Frame = +3
Query: 189 TMDIRPNHTIYXXXXXXXXXXXXXXXSLYAIFSQFGQILDIVAMKTLKMRGQAFVIFKEI 368
+ D+R NHTIY SLYAIFSQFGQILDI+ +T+KMRGQAFVIFKE+
Sbjct: 3 SQDLRLNHTIYINNLNEKIKKDELKKSLYAIFSQFGQILDILVARTVKMRGQAFVIFKEV 62
Query: 369 SSATVALRSMQGFPFYDKPMRIQYSKIDSDIIA 467
+SA+ ALRSMQGFPFYDKPMRIQY+K DSDIIA
Sbjct: 63 NSASNALRSMQGFPFYDKPMRIQYAKQDSDIIA 95
>UniRef50_P43332 Cluster: U1 small nuclear ribonucleoprotein A;
n=32; Eumetazoa|Rep: U1 small nuclear ribonucleoprotein
A - Drosophila melanogaster (Fruit fly)
Length = 216
Score = 129 bits (311), Expect = 5e-29
Identities = 64/92 (69%), Positives = 71/92 (77%)
Frame = +3
Query: 192 MDIRPNHTIYXXXXXXXXXXXXXXXSLYAIFSQFGQILDIVAMKTLKMRGQAFVIFKEIS 371
M++ PN TIY SLYAIFSQFGQILDIVA+KTLKMRGQAFVIFKEI
Sbjct: 1 MEMLPNQTIYINNLNEKIKKEELKKSLYAIFSQFGQILDIVALKTLKMRGQAFVIFKEIG 60
Query: 372 SATVALRSMQGFPFYDKPMRIQYSKIDSDIIA 467
SA+ ALR+MQGFPFYDKPM+I YSK DSDI+A
Sbjct: 61 SASNALRTMQGFPFYDKPMQIAYSKSDSDIVA 92
Score = 33.5 bits (73), Expect = 3.2
Identities = 17/28 (60%), Positives = 20/28 (71%), Gaps = 3/28 (10%)
Frame = +1
Query: 469 KSKGTFQERPKRPKLPK---GTDDGKKK 543
K KGTF+ERPK+ K PK GTD+ K K
Sbjct: 93 KIKGTFKERPKKVKPPKPAPGTDEKKDK 120
>UniRef50_Q5BXV2 Cluster: SJCHGC09182 protein; n=1; Schistosoma
japonicum|Rep: SJCHGC09182 protein - Schistosoma
japonicum (Blood fluke)
Length = 239
Score = 116 bits (280), Expect = 3e-25
Identities = 53/91 (58%), Positives = 68/91 (74%)
Frame = +3
Query: 201 RPNHTIYXXXXXXXXXXXXXXXSLYAIFSQFGQILDIVAMKTLKMRGQAFVIFKEISSAT 380
+PN+TIY SLYA+F QFGQILDI+ +TLKMRGQAFV+F +I+SA+
Sbjct: 55 QPNNTIYINNLNEKIKRDELKKSLYAVFVQFGQILDIITSRTLKMRGQAFVVFDDINSAS 114
Query: 381 VALRSMQGFPFYDKPMRIQYSKIDSDIIAXK 473
ALRSMQGFP Y+KPMRI ++K+DSD+IA +
Sbjct: 115 TALRSMQGFPLYEKPMRIHFAKVDSDVIAKR 145
>UniRef50_Q21323 Cluster: Rnp (Rrm rna binding domain) containing
protein 3; n=7; Bilateria|Rep: Rnp (Rrm rna binding
domain) containing protein 3 - Caenorhabditis elegans
Length = 217
Score = 107 bits (256), Expect = 2e-22
Identities = 47/91 (51%), Positives = 66/91 (72%)
Frame = +3
Query: 195 DIRPNHTIYXXXXXXXXXXXXXXXSLYAIFSQFGQILDIVAMKTLKMRGQAFVIFKEISS 374
DI PNHTIY SL+ +F+QFG+I+ +++ + KMRGQA ++FKE+SS
Sbjct: 3 DINPNHTIYVNNLNEKVKKDELKRSLHMVFTQFGEIIQLMSFRKEKMRGQAHIVFKEVSS 62
Query: 375 ATVALRSMQGFPFYDKPMRIQYSKIDSDIIA 467
A+ ALR++QGFPFY KPMRIQY++ DSD+I+
Sbjct: 63 ASNALRALQGFPFYGKPMRIQYAREDSDVIS 93
>UniRef50_Q5DD61 Cluster: SJCHGC05726 protein; n=2; Bilateria|Rep:
SJCHGC05726 protein - Schistosoma japonicum (Blood
fluke)
Length = 226
Score = 102 bits (245), Expect = 5e-21
Identities = 48/95 (50%), Positives = 66/95 (69%), Gaps = 1/95 (1%)
Frame = +3
Query: 192 MDIRPNHTIYXXXXXXXXXXXXXXXSLYAIFSQFGQILDIVAMKTLKMRGQAFVIFKEIS 371
MDIRPNHT+Y +LY IF Q G+++DI+AMKT+KMRGQAF+I+++I+
Sbjct: 1 MDIRPNHTLYVNNLNDKVKKNDLKKALYYIFGQHGRLIDIIAMKTMKMRGQAFIIYQDIA 60
Query: 372 SATVALRSMQGFPFYDKPMRIQYSKIDS-DIIAXK 473
AT A RS+QGF + +PMR+ Y+K DS II+ K
Sbjct: 61 CATQAYRSLQGFQLFQRPMRVTYAKKDSLQIISLK 95
>UniRef50_A3AH19 Cluster: Putative uncharacterized protein; n=2;
Oryza sativa|Rep: Putative uncharacterized protein -
Oryza sativa subsp. japonica (Rice)
Length = 267
Score = 95.9 bits (228), Expect = 5e-19
Identities = 46/91 (50%), Positives = 61/91 (67%)
Frame = +3
Query: 195 DIRPNHTIYXXXXXXXXXXXXXXXSLYAIFSQFGQILDIVAMKTLKMRGQAFVIFKEISS 374
DI PN T+Y SLYA+ SQ+G+ILD+VA+KT K+RGQA+V+F EI++
Sbjct: 5 DIPPNQTVYLRNLNEKVKKEELKRSLYALCSQYGRILDVVALKTPKLRGQAWVVFSEITA 64
Query: 375 ATVALRSMQGFPFYDKPMRIQYSKIDSDIIA 467
AT A R +Q F FY K MR+QY+K SD +A
Sbjct: 65 ATNAFRGLQEFDFYGKRMRVQYAKTRSDCLA 95
>UniRef50_Q54J05 Cluster: U2 small nuclear ribonucleoprotein B; n=1;
Dictyostelium discoideum AX4|Rep: U2 small nuclear
ribonucleoprotein B - Dictyostelium discoideum AX4
Length = 241
Score = 93.1 bits (221), Expect = 4e-18
Identities = 44/91 (48%), Positives = 59/91 (64%)
Frame = +3
Query: 195 DIRPNHTIYXXXXXXXXXXXXXXXSLYAIFSQFGQILDIVAMKTLKMRGQAFVIFKEISS 374
DI PN T+Y L +FS++G IL+IV K+LKMRGQAF++FK+I+S
Sbjct: 7 DIPPNQTLYVNNLYEKISKKKLIEQLLLLFSKYGPILEIVGSKSLKMRGQAFIVFKDITS 66
Query: 375 ATVALRSMQGFPFYDKPMRIQYSKIDSDIIA 467
A+ ALR M GF F D+PM+IQY K SD ++
Sbjct: 67 ASNALREMNGFNFLDRPMKIQYCKSKSDAVS 97
>UniRef50_A1CE39 Cluster: RNA binding domain protein; n=6;
Pezizomycotina|Rep: RNA binding domain protein -
Aspergillus clavatus
Length = 194
Score = 92.3 bits (219), Expect = 7e-18
Identities = 41/88 (46%), Positives = 59/88 (67%)
Frame = +3
Query: 204 PNHTIYXXXXXXXXXXXXXXXSLYAIFSQFGQILDIVAMKTLKMRGQAFVIFKEISSATV 383
PN T+Y SLY +FS +G +LD+VAMKT KMRGQA ++FK++ ++T
Sbjct: 22 PNQTLYCTNLPDKLRKYDLRLSLYTLFSTYGTVLDVVAMKTEKMRGQAHIVFKDVQASTQ 81
Query: 384 ALRSMQGFPFYDKPMRIQYSKIDSDIIA 467
A+R++QGF F+ K M+I Y+K SD+IA
Sbjct: 82 AMRALQGFDFFGKEMKIVYAKGSSDVIA 109
>UniRef50_Q0UXL2 Cluster: Putative uncharacterized protein; n=1;
Phaeosphaeria nodorum|Rep: Putative uncharacterized
protein - Phaeosphaeria nodorum (Septoria nodorum)
Length = 177
Score = 87.8 bits (208), Expect = 1e-16
Identities = 39/88 (44%), Positives = 58/88 (65%)
Frame = +3
Query: 204 PNHTIYXXXXXXXXXXXXXXXSLYAIFSQFGQILDIVAMKTLKMRGQAFVIFKEISSATV 383
PN T+Y SLY +F+ +G +LD+VA+KT KMRGQA V+F+++ ++T
Sbjct: 20 PNRTLYVRNLNDKLPKEDLKRSLYMLFATYGVVLDVVALKTAKMRGQAHVVFRDLDASTQ 79
Query: 384 ALRSMQGFPFYDKPMRIQYSKIDSDIIA 467
A+R++QGF F+ K M+I Y+K SD IA
Sbjct: 80 AMRALQGFTFFGKDMQIAYAKTKSDTIA 107
>UniRef50_O74968 Cluster: U1 snRNP-associated protein Usp102; n=1;
Schizosaccharomyces pombe|Rep: U1 snRNP-associated
protein Usp102 - Schizosaccharomyces pombe (Fission
yeast)
Length = 249
Score = 84.2 bits (199), Expect = 2e-15
Identities = 40/97 (41%), Positives = 57/97 (58%)
Frame = +3
Query: 183 KMTMDIRPNHTIYXXXXXXXXXXXXXXXSLYAIFSQFGQILDIVAMKTLKMRGQAFVIFK 362
K T P+ T+Y L +F +G+++D+ A KTL+MRGQAFV+F
Sbjct: 17 KETDSQTPSETLYIRNIEEKIRLTMLKRILEHLFGSYGKVIDVQARKTLRMRGQAFVVFD 76
Query: 363 EISSATVALRSMQGFPFYDKPMRIQYSKIDSDIIAXK 473
+ +A+ AL+ +QG+P Y KPM IQYSK SDII +
Sbjct: 77 NLENASRALKDLQGYPLYGKPMMIQYSKSKSDIIVQR 113
>UniRef50_Q01EK0 Cluster: U2snrB small nuclear ribonucleoprotein
U2B, putative; n=2; Ostreococcus|Rep: U2snrB small
nuclear ribonucleoprotein U2B, putative - Ostreococcus
tauri
Length = 221
Score = 83.4 bits (197), Expect = 3e-15
Identities = 35/92 (38%), Positives = 58/92 (63%)
Frame = +3
Query: 189 TMDIRPNHTIYXXXXXXXXXXXXXXXSLYAIFSQFGQILDIVAMKTLKMRGQAFVIFKEI 368
T+ + +HT+Y +LY++FS FG+ILDIVA +T ++RGQA++++ +
Sbjct: 3 TVKQQGSHTLYVNNLSEKISKQELRMALYSVFSSFGKILDIVAARTYRLRGQAWIVYDTM 62
Query: 369 SSATVALRSMQGFPFYDKPMRIQYSKIDSDII 464
A A +Q FPFYDKP++I ++ + SD+I
Sbjct: 63 DEAQRAFEGLQNFPFYDKPLKIAFANLSSDVI 94
>UniRef50_Q5YES2 Cluster: Small nuclear ribonucleoprotein; n=1;
Bigelowiella natans|Rep: Small nuclear ribonucleoprotein
- Bigelowiella natans (Pedinomonas minutissima)
(Chlorarachnion sp.(strain CCMP 621))
Length = 227
Score = 79.4 bits (187), Expect = 5e-14
Identities = 38/92 (41%), Positives = 54/92 (58%)
Frame = +3
Query: 198 IRPNHTIYXXXXXXXXXXXXXXXSLYAIFSQFGQILDIVAMKTLKMRGQAFVIFKEISSA 377
+RPN TIY +LY FSQFG IL++ A K RGQA+++F ++S A
Sbjct: 7 VRPNQTIYIQNLNEKLKRDELRINLYHAFSQFGNILEVFASKKGNKRGQAWIVFDDLSGA 66
Query: 378 TVALRSMQGFPFYDKPMRIQYSKIDSDIIAXK 473
T ++R MQ F+ K MR+ Y+K SDII+ +
Sbjct: 67 TKSVRGMQNVDFFGKKMRLSYAKEKSDIISKR 98
>UniRef50_Q1JSG9 Cluster: Rnp (Rrm rna binding domain) containing
protein, putative; n=1; Toxoplasma gondii|Rep: Rnp (Rrm
rna binding domain) containing protein, putative -
Toxoplasma gondii
Length = 233
Score = 78.6 bits (185), Expect = 9e-14
Identities = 39/90 (43%), Positives = 52/90 (57%)
Frame = +3
Query: 195 DIRPNHTIYXXXXXXXXXXXXXXXSLYAIFSQFGQILDIVAMKTLKMRGQAFVIFKEISS 374
D+ PN T+Y LY FS +G +L++V T MRGQAFV+F ++ S
Sbjct: 31 DVPPNQTLYCNNLNDKLHKQDLQACLYEFFSAYGLVLEVVVRGT-NMRGQAFVVFADLGS 89
Query: 375 ATVALRSMQGFPFYDKPMRIQYSKIDSDII 464
AT ALR+ QG F KP+R+QY+K SD I
Sbjct: 90 ATAALRAAQGKDFLGKPLRLQYAKTKSDAI 119
Score = 31.9 bits (69), Expect = 9.8
Identities = 16/39 (41%), Positives = 22/39 (56%)
Frame = +3
Query: 291 FGQILDIVAMKTLKMRGQAFVIFKEISSATVALRSMQGF 407
FGQ + ++ RG AFV F + A VA++ MQGF
Sbjct: 180 FGQYRGHTESRLIEGRGVAFVDFSTQAQAAVAMQGMQGF 218
>UniRef50_Q22CK3 Cluster: U1 small nuclear ribonucleoprotein A; n=1;
Tetrahymena thermophila SB210|Rep: U1 small nuclear
ribonucleoprotein A - Tetrahymena thermophila SB210
Length = 270
Score = 75.4 bits (177), Expect = 8e-13
Identities = 34/87 (39%), Positives = 55/87 (63%)
Frame = +3
Query: 204 PNHTIYXXXXXXXXXXXXXXXSLYAIFSQFGQILDIVAMKTLKMRGQAFVIFKEISSATV 383
P T+Y LY +F QFG+ILDI+ K+ +RGQA++IFK+I++AT
Sbjct: 51 PKETLYINNLNDKINQEDMKYGLYFLFQQFGEILDIILKKSNTLRGQAWIIFKDITAATN 110
Query: 384 ALRSMQGFPFYDKPMRIQYSKIDSDII 464
A +++ GF F+DK ++I ++K S+I+
Sbjct: 111 AKKNLNGFLFFDKELKINFAKQRSEIL 137
>UniRef50_UPI00004983FC Cluster: U1snRNP-specific protein; n=1;
Entamoeba histolytica HM-1:IMSS|Rep: U1snRNP-specific
protein - Entamoeba histolytica HM-1:IMSS
Length = 232
Score = 74.1 bits (174), Expect = 2e-12
Identities = 33/69 (47%), Positives = 45/69 (65%)
Frame = +3
Query: 267 SLYAIFSQFGQILDIVAMKTLKMRGQAFVIFKEISSATVALRSMQGFPFYDKPMRIQYSK 446
SL +F +G +L + K+LKMRGQAFVI+ SA A+ S+Q +D+PM I YSK
Sbjct: 40 SLNTVFGAYGNVLQVCVRKSLKMRGQAFVIYDTKESAQFAMESLQNHELFDRPMHINYSK 99
Query: 447 IDSDIIAXK 473
++SDII K
Sbjct: 100 VESDIIVKK 108
>UniRef50_Q4WNG1 Cluster: U1 small nuclear ribonucleoprotein A,
putative; n=8; Eurotiomycetidae|Rep: U1 small nuclear
ribonucleoprotein A, putative - Aspergillus fumigatus
(Sartorya fumigata)
Length = 294
Score = 73.7 bits (173), Expect = 2e-12
Identities = 30/54 (55%), Positives = 44/54 (81%)
Frame = +3
Query: 267 SLYAIFSQFGQILDIVAMKTLKMRGQAFVIFKEISSATVALRSMQGFPFYDKPM 428
SLY +FS +G +LD+VAMKT KMRGQA ++FK++ ++T A+R++QGF F+ K M
Sbjct: 124 SLYTLFSTYGTVLDVVAMKTEKMRGQAHIVFKDVQASTQAMRALQGFEFFGKEM 177
>UniRef50_A7AN41 Cluster: U2 small nuclear ribonucleoprotein B',
putative; n=1; Babesia bovis|Rep: U2 small nuclear
ribonucleoprotein B', putative - Babesia bovis
Length = 285
Score = 73.3 bits (172), Expect = 3e-12
Identities = 41/100 (41%), Positives = 55/100 (55%), Gaps = 2/100 (2%)
Frame = +3
Query: 174 FVIKMTMD--IRPNHTIYXXXXXXXXXXXXXXXSLYAIFSQFGQILDIVAMKTLKMRGQA 347
+ +K+ D I PN TIY L +F +FG+ILDIVA+ + +GQA
Sbjct: 17 YTMKVDADPSIPPNQTIYIKNINERIKVDVLKAELLKMFGRFGKILDIVALTSFWRKGQA 76
Query: 348 FVIFKEISSATVALRSMQGFPFYDKPMRIQYSKIDSDIIA 467
F+IF + SAT AL MQGF M+I Y++ SDIIA
Sbjct: 77 FIIFDNVESATNALHEMQGFVMDGHAMQINYAREKSDIIA 116
>UniRef50_Q7LL14 Cluster: Probable U2 small nuclear
ribonucleoprotein B''; n=1; Schizosaccharomyces
pombe|Rep: Probable U2 small nuclear ribonucleoprotein
B'' - Schizosaccharomyces pombe (Fission yeast)
Length = 111
Score = 72.1 bits (169), Expect = 8e-12
Identities = 32/66 (48%), Positives = 50/66 (75%)
Frame = +3
Query: 267 SLYAIFSQFGQILDIVAMKTLKMRGQAFVIFKEISSATVALRSMQGFPFYDKPMRIQYSK 446
+LY +FS +G ++DIVA+KT KMRGQA V+F + S+A +A+++++ F F+ K M+IQY+
Sbjct: 23 ALYMLFSTYGTVVDIVALKTPKMRGQAHVVFFDPSAAAIAMKALKNFIFFGKEMKIQYAH 82
Query: 447 IDSDII 464
S II
Sbjct: 83 SKSKII 88
>UniRef50_Q4UD23 Cluster: U1 snRNP protein, putative; n=1; Theileria
annulata|Rep: U1 snRNP protein, putative - Theileria
annulata
Length = 346
Score = 71.3 bits (167), Expect = 1e-11
Identities = 35/103 (33%), Positives = 55/103 (53%)
Frame = +3
Query: 159 KTKLSFVIKMTMDIRPNHTIYXXXXXXXXXXXXXXXSLYAIFSQFGQILDIVAMKTLKMR 338
K + VI+ I PN T+Y L +F ++G+IL IVAMK+ R
Sbjct: 33 KELYTMVIEADPSIPPNQTLYIKNINDRIKIDVLKRDLMELFGKYGKILQIVAMKSFWRR 92
Query: 339 GQAFVIFKEISSATVALRSMQGFPFYDKPMRIQYSKIDSDIIA 467
GQA+++F + S+T A+ +QGF Y ++I Y+ SDI++
Sbjct: 93 GQAWIVFDNVESSTQAMNELQGFKIYGHTLQINYALEKSDIVS 135
>UniRef50_Q4P2S8 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 303
Score = 71.3 bits (167), Expect = 1e-11
Identities = 29/58 (50%), Positives = 44/58 (75%)
Frame = +3
Query: 270 LYAIFSQFGQILDIVAMKTLKMRGQAFVIFKEISSATVALRSMQGFPFYDKPMRIQYS 443
L A+FS +G++LD+VA + MRGQAFV+F+ +S ++ A R ++GFPFY K + I+YS
Sbjct: 93 LLALFSTYGRVLDVVATRAPSMRGQAFVVFESVSFSSAAKRGLEGFPFYGKSLHIEYS 150
>UniRef50_A0DWP2 Cluster: Chromosome undetermined scaffold_67, whole
genome shotgun sequence; n=4; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_67,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 228
Score = 70.9 bits (166), Expect = 2e-11
Identities = 33/87 (37%), Positives = 50/87 (57%)
Frame = +3
Query: 183 KMTMDIRPNHTIYXXXXXXXXXXXXXXXSLYAIFSQFGQILDIVAMKTLKMRGQAFVIFK 362
++ D P T+Y LY +FSQFG++L IV KT K+RGQAF++F+
Sbjct: 11 QINQDSAPKETLYVTGLNDKIKLEDLKFVLYILFSQFGEVLQIVMKKTQKLRGQAFIVFQ 70
Query: 363 EISSATVALRSMQGFPFYDKPMRIQYS 443
I+ AT A ++ G YDKP+ I+++
Sbjct: 71 NITYATNAKSALTGMMVYDKPLIIEFA 97
>UniRef50_A1CBE1 Cluster: Small nuclear ribonucleoprotein U1a,U2b;
n=20; Pezizomycotina|Rep: Small nuclear ribonucleoprotein
U1a,U2b - Aspergillus clavatus
Length = 1390
Score = 70.9 bits (166), Expect = 2e-11
Identities = 31/64 (48%), Positives = 45/64 (70%)
Frame = +3
Query: 267 SLYAIFSQFGQILDIVAMKTLKMRGQAFVIFKEISSATVALRSMQGFPFYDKPMRIQYSK 446
+L IFS++G IL+IVA LK +GQAF++F ++ SAT A+ + GF +DKPM + Y+K
Sbjct: 1173 ALAEIFSEYGNILEIVAKTNLKAKGQAFIVFDDVESATRAIDEVNGFDLFDKPMVLDYAK 1232
Query: 447 IDSD 458
SD
Sbjct: 1233 TKSD 1236
>UniRef50_Q7RD14 Cluster: U1 small nuclear ribonucleoprotein a; n=7;
Plasmodium|Rep: U1 small nuclear ribonucleoprotein a -
Plasmodium yoelii yoelii
Length = 508
Score = 70.1 bits (164), Expect = 3e-11
Identities = 37/99 (37%), Positives = 55/99 (55%)
Frame = +3
Query: 165 KLSFVIKMTMDIRPNHTIYXXXXXXXXXXXXXXXSLYAIFSQFGQILDIVAMKTLKMRGQ 344
K + VI +I PN T+Y SL IF+Q+G I DI+ MK+ +GQ
Sbjct: 172 KYNKVITADPNIPPNETLYIKNLNDKIKCEDMKKSLKNIFNQYGLIEDIIVMKSFWRKGQ 231
Query: 345 AFVIFKEISSATVALRSMQGFPFYDKPMRIQYSKIDSDI 461
A++++ I S+T AL ++QGF + K M+I YS SD+
Sbjct: 232 AWIVYDTIESSTKALNALQGFVLFGKIMQINYSHNKSDV 270
>UniRef50_UPI0001509B9E Cluster: U1 small nuclear ribonucleoprotein
A; n=1; Tetrahymena thermophila SB210|Rep: U1 small
nuclear ribonucleoprotein A - Tetrahymena thermophila
SB210
Length = 247
Score = 69.3 bits (162), Expect = 5e-11
Identities = 32/87 (36%), Positives = 51/87 (58%)
Frame = +3
Query: 204 PNHTIYXXXXXXXXXXXXXXXSLYAIFSQFGQILDIVAMKTLKMRGQAFVIFKEISSATV 383
PN+TIY L+ +FS++G IL+I A K ++MRGQAFV+F++I+ A
Sbjct: 30 PNNTIYINNLNERISIDDLKQELFKLFSEYGSILEIKAKKNIRMRGQAFVVFEQIACAQK 89
Query: 384 ALRSMQGFPFYDKPMRIQYSKIDSDII 464
A+ ++ FY K + + ++K SD I
Sbjct: 90 AIEALNRKNFYGKALHLNFAKTKSDAI 116
>UniRef50_Q6CVJ3 Cluster: Kluyveromyces lactis strain NRRL Y-1140
chromosome B of strain NRRL Y- 1140 of Kluyveromyces
lactis; n=1; Kluyveromyces lactis|Rep: Kluyveromyces
lactis strain NRRL Y-1140 chromosome B of strain NRRL Y-
1140 of Kluyveromyces lactis - Kluyveromyces lactis
(Yeast) (Candida sphaerica)
Length = 114
Score = 68.9 bits (161), Expect = 7e-11
Identities = 35/108 (32%), Positives = 57/108 (52%)
Frame = +3
Query: 123 QSNSFLVTPLV*KTKLSFVIKMTMDIRPNHTIYXXXXXXXXXXXXXXXSLYAIFSQFGQI 302
Q N + P K K T++I PN+T+Y SLY +F+ +G++
Sbjct: 3 QKNGYSTEPPTKKQKTQQKTTETIEIEPNNTVYVKNLNDQIKIQTVRESLYMLFATYGEV 62
Query: 303 LDIVAMKTLKMRGQAFVIFKEISSATVALRSMQGFPFYDKPMRIQYSK 446
+ + T K RGQAF+ FK + A +AL S++ F++KP+ +Q+SK
Sbjct: 63 IKV--SMTPKQRGQAFITFKSVDEANLALLSLKDELFFNKPLVLQFSK 108
>UniRef50_Q6BWJ3 Cluster: Similar to sp|P09012 Homo sapiens U1 small
nuclear ribonucleoprotein A; n=1; Debaryomyces
hansenii|Rep: Similar to sp|P09012 Homo sapiens U1 small
nuclear ribonucleoprotein A - Debaryomyces hansenii
(Yeast) (Torulaspora hansenii)
Length = 116
Score = 68.5 bits (160), Expect = 9e-11
Identities = 34/87 (39%), Positives = 50/87 (57%)
Frame = +3
Query: 207 NHTIYXXXXXXXXXXXXXXXSLYAIFSQFGQILDIVAMKTLKMRGQAFVIFKEISSATVA 386
++T+Y +LY FS +G I+DIV KMRGQA +IF + AT A
Sbjct: 22 SYTLYVNNLNDKIQLATLKHNLYVYFSTYGDIIDIVMKAQGKMRGQAHIIFANVMHATNA 81
Query: 387 LRSMQGFPFYDKPMRIQYSKIDSDIIA 467
++S+QG PF++K + I+YS S II+
Sbjct: 82 MKSLQGKPFFEKDLHIEYSLKKSKIIS 108
>UniRef50_A7ANK4 Cluster: U2 small nuclear ribonucleoprotein B',
putative; n=3; Piroplasmida|Rep: U2 small nuclear
ribonucleoprotein B', putative - Babesia bovis
Length = 213
Score = 67.7 bits (158), Expect = 2e-10
Identities = 31/81 (38%), Positives = 46/81 (56%)
Frame = +3
Query: 204 PNHTIYXXXXXXXXXXXXXXXSLYAIFSQFGQILDIVAMKTLKMRGQAFVIFKEISSATV 383
PNHT+Y LY +G+I+DI A +T K+RGQAFV F EI+SA
Sbjct: 14 PNHTLYVSNLDDRIHVNDLRKLLYEFLIPYGEIVDISARRTQKLRGQAFVSFSEIASAIS 73
Query: 384 ALRSMQGFPFYDKPMRIQYSK 446
A + + G F D+P+++ Y++
Sbjct: 74 AFKGVNGRSFLDRPLKVAYAR 94
>UniRef50_A3LPV2 Cluster: Predicted protein; n=2; Pichia|Rep:
Predicted protein - Pichia stipitis (Yeast)
Length = 220
Score = 67.3 bits (157), Expect = 2e-10
Identities = 34/83 (40%), Positives = 48/83 (57%)
Frame = +3
Query: 210 HTIYXXXXXXXXXXXXXXXSLYAIFSQFGQILDIVAMKTLKMRGQAFVIFKEISSATVAL 389
+TIY SL IF++FG I+ I A K LKM+GQAF+ F+ SA AL
Sbjct: 9 NTIYVHNLNDKVSLKKLRQSLDEIFNKFGTIIQITAHKNLKMKGQAFITFETAESAAKAL 68
Query: 390 RSMQGFPFYDKPMRIQYSKIDSD 458
+Q ++KP++IQY+K +SD
Sbjct: 69 VKLQNHQLFNKPIKIQYAKTNSD 91
>UniRef50_Q8I2G9 Cluster: Small nuclear ribonucleoprotein (SnRNP),
putative; n=6; Plasmodium|Rep: Small nuclear
ribonucleoprotein (SnRNP), putative - Plasmodium
falciparum (isolate 3D7)
Length = 193
Score = 66.5 bits (155), Expect = 4e-10
Identities = 34/90 (37%), Positives = 49/90 (54%)
Frame = +3
Query: 195 DIRPNHTIYXXXXXXXXXXXXXXXSLYAIFSQFGQILDIVAMKTLKMRGQAFVIFKEISS 374
DI PN T+Y LY F +G I+DI K+ K RGQAF++F I+S
Sbjct: 5 DIPPNQTLYVNNLEDKINVNDLKFLLYEFFCPYGNIIDINIKKSNKGRGQAFIVFNNIAS 64
Query: 375 ATVALRSMQGFPFYDKPMRIQYSKIDSDII 464
+T+A ++++G F K + I Y+K S II
Sbjct: 65 STLAYKNLKGKMFLKKNININYAKTKSTII 94
>UniRef50_Q5A4F9 Cluster: Putative uncharacterized protein USA1;
n=1; Candida albicans|Rep: Putative uncharacterized
protein USA1 - Candida albicans (Yeast)
Length = 204
Score = 64.9 bits (151), Expect = 1e-09
Identities = 34/88 (38%), Positives = 49/88 (55%)
Frame = +3
Query: 204 PNHTIYXXXXXXXXXXXXXXXSLYAIFSQFGQILDIVAMKTLKMRGQAFVIFKEISSATV 383
P TIY L F+ G+IL I A+KTLK++GQAF+ F++I SAT
Sbjct: 4 PRQTIYVNNLNEKVSINKLKNELQQTFNVCGKILQISALKTLKLKGQAFITFEDIPSATK 63
Query: 384 ALRSMQGFPFYDKPMRIQYSKIDSDIIA 467
AL + + KPM + Y+K D+D+I+
Sbjct: 64 AL-ELNKKDLFSKPMNVTYAKSDADVIS 90
>UniRef50_Q6C824 Cluster: Similar to tr|Q41499 Solanum tuberosum
Spliceosomal protein; n=1; Yarrowia lipolytica|Rep:
Similar to tr|Q41499 Solanum tuberosum Spliceosomal
protein - Yarrowia lipolytica (Candida lipolytica)
Length = 146
Score = 64.1 bits (149), Expect = 2e-09
Identities = 35/88 (39%), Positives = 47/88 (53%)
Frame = +3
Query: 204 PNHTIYXXXXXXXXXXXXXXXSLYAIFSQFGQILDIVAMKTLKMRGQAFVIFKEISSATV 383
P+ T+Y LY FS +G ILDIVAMK +MRGQA V+F +I ++
Sbjct: 29 PSPTLYVKNLTDKCTKSDLKRYLYMRFSSYGHILDIVAMKNERMRGQAHVVFNDIDASIS 88
Query: 384 ALRSMQGFPFYDKPMRIQYSKIDSDIIA 467
AL +Q F K M I+Y++ S IA
Sbjct: 89 ALNGLQKSEFMGKEMVIEYARSKSHAIA 116
>UniRef50_A0DPF4 Cluster: Chromosome undetermined scaffold_59, whole
genome shotgun sequence; n=2; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_59,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 275
Score = 62.9 bits (146), Expect = 5e-09
Identities = 31/88 (35%), Positives = 47/88 (53%)
Frame = +3
Query: 204 PNHTIYXXXXXXXXXXXXXXXSLYAIFSQFGQILDIVAMKTLKMRGQAFVIFKEISSATV 383
PN T+Y +LYA+FSQ G++LDI+ K + MRGQAF++ ++ SA
Sbjct: 46 PNKTLYINRLNEKVTAEEMRQTLYALFSQSGKVLDIIVKKNILMRGQAFILMEDEESAIQ 105
Query: 384 ALRSMQGFPFYDKPMRIQYSKIDSDIIA 467
A YDK M++ ++K S I+
Sbjct: 106 AQIKFHNTQLYDKVMKVNFAKEKSYYIS 133
>UniRef50_Q6BW78 Cluster: Similar to tr|O74968 Schizosaccharomyces
pombe Small nuclear ribonucleoprotein; n=1; Debaryomyces
hansenii|Rep: Similar to tr|O74968 Schizosaccharomyces
pombe Small nuclear ribonucleoprotein - Debaryomyces
hansenii (Yeast) (Torulaspora hansenii)
Length = 252
Score = 62.5 bits (145), Expect = 6e-09
Identities = 28/90 (31%), Positives = 48/90 (53%)
Frame = +3
Query: 189 TMDIRPNHTIYXXXXXXXXXXXXXXXSLYAIFSQFGQILDIVAMKTLKMRGQAFVIFKEI 368
T D T+Y L ++F ++G+I+ I A K LKM+GQAFV F+
Sbjct: 37 TNDAESTETVYVNNLNDKVSVNKLKGELESVFQKYGKIIQITAHKNLKMKGQAFVTFENK 96
Query: 369 SSATVALRSMQGFPFYDKPMRIQYSKIDSD 458
+++ A+ +Q + KPM ++Y++ +SD
Sbjct: 97 TASEAAIHGLQEHELFGKPMHVEYARSNSD 126
>UniRef50_Q75EQ7 Cluster: AAR022Wp; n=2; Saccharomycetaceae|Rep:
AAR022Wp - Ashbya gossypii (Yeast) (Eremothecium
gossypii)
Length = 114
Score = 60.5 bits (140), Expect = 2e-08
Identities = 32/83 (38%), Positives = 47/83 (56%)
Frame = +3
Query: 204 PNHTIYXXXXXXXXXXXXXXXSLYAIFSQFGQILDIVAMKTLKMRGQAFVIFKEISSATV 383
P T+Y +LY +FS FG++L I AM K+RGQAFV+ + A +
Sbjct: 30 PRSTLYISNLNDQVKISTLRTNLYLLFSTFGEVLRI-AMSP-KLRGQAFVVLSTVDEANL 87
Query: 384 ALRSMQGFPFYDKPMRIQYSKID 452
A+ S++ F+ KP+RIQ+SK D
Sbjct: 88 AMISLKDESFFGKPLRIQFSKSD 110
>UniRef50_Q5KMQ5 Cluster: Putative uncharacterized protein; n=1;
Filobasidiella neoformans|Rep: Putative uncharacterized
protein - Cryptococcus neoformans (Filobasidiella
neoformans)
Length = 282
Score = 60.1 bits (139), Expect = 3e-08
Identities = 29/75 (38%), Positives = 44/75 (58%)
Frame = +3
Query: 204 PNHTIYXXXXXXXXXXXXXXXSLYAIFSQFGQILDIVAMKTLKMRGQAFVIFKEISSATV 383
P+ T+Y LYA+FS +G+++D+VA K RGQAFV+F+E +AT
Sbjct: 25 PSPTLYVSGLETKTKKPELRQQLYALFSPYGRVIDVVAKKHDGGRGQAFVVFEEQVAATA 84
Query: 384 ALRSMQGFPFYDKPM 428
ALR + G FY++ +
Sbjct: 85 ALRGLTGETFYNREL 99
>UniRef50_A5DEK8 Cluster: Putative uncharacterized protein; n=1;
Pichia guilliermondii|Rep: Putative uncharacterized
protein - Pichia guilliermondii (Yeast) (Candida
guilliermondii)
Length = 141
Score = 58.4 bits (135), Expect = 1e-07
Identities = 30/90 (33%), Positives = 47/90 (52%)
Frame = +3
Query: 198 IRPNHTIYXXXXXXXXXXXXXXXSLYAIFSQFGQILDIVAMKTLKMRGQAFVIFKEISSA 377
IRP+ T+Y +LY +FS +G ++DI+ KMRGQA +I + ++SA
Sbjct: 21 IRPSQTLYVNNLNDQVLRRLLKHNLYLLFSTYGDVIDIIIRP--KMRGQAHIILESVTSA 78
Query: 378 TVALRSMQGFPFYDKPMRIQYSKIDSDIIA 467
A + F+ K M + Y+K S I+A
Sbjct: 79 LSAKAGLDKRRFFSKEMSVNYAKTKSRIVA 108
>UniRef50_A2DS99 Cluster: Putative uncharacterized protein; n=1;
Trichomonas vaginalis G3|Rep: Putative uncharacterized
protein - Trichomonas vaginalis G3
Length = 238
Score = 57.6 bits (133), Expect = 2e-07
Identities = 26/59 (44%), Positives = 39/59 (66%)
Frame = +3
Query: 270 LYAIFSQFGQILDIVAMKTLKMRGQAFVIFKEISSATVALRSMQGFPFYDKPMRIQYSK 446
++A FS +GQI+DI A K +K RGQA+V ++ I SA A R + G + P+ IQ++K
Sbjct: 28 VFAYFSPYGQIIDISASKAIKKRGQAWVTYQNIESAINAKRDLNGIYIFSTPISIQFAK 86
Score = 32.3 bits (70), Expect = 7.4
Identities = 18/53 (33%), Positives = 29/53 (54%), Gaps = 1/53 (1%)
Frame = +3
Query: 291 FGQILDIVAMKTLKMRGQ-AFVIFKEISSATVALRSMQGFPFYDKPMRIQYSK 446
FGQ V ++TL + AFV +K + VA++ + GF + + IQ+SK
Sbjct: 186 FGQFPGFVEVRTLPGKQTIAFVEYKTEEQSAVAIQELNGFEIENHHLTIQFSK 238
>UniRef50_A5DSN5 Cluster: Putative uncharacterized protein; n=1;
Lodderomyces elongisporus NRRL YB-4239|Rep: Putative
uncharacterized protein - Lodderomyces elongisporus
(Yeast) (Saccharomyces elongisporus)
Length = 176
Score = 56.0 bits (129), Expect = 5e-07
Identities = 30/97 (30%), Positives = 57/97 (58%), Gaps = 1/97 (1%)
Frame = +3
Query: 180 IKMTMD-IRPNHTIYXXXXXXXXXXXXXXXSLYAIFSQFGQILDIVAMKTLKMRGQAFVI 356
IK+ ++ ++P+HT++ +LY +FS FG D++++K K AF+
Sbjct: 32 IKLDLNNLKPSHTLFVKNLDNKANKQSLVHNLYILFSAFG---DVISIKLYKC--YAFIA 86
Query: 357 FKEISSATVALRSMQGFPFYDKPMRIQYSKIDSDIIA 467
F + SA +ALRS+Q F+++P++I Y+ +S ++A
Sbjct: 87 FGLVESAKLALRSLQEEEFFERPLKIGYALKESKVVA 123
>UniRef50_A3LPR6 Cluster: Predicted protein; n=3;
Saccharomycetales|Rep: Predicted protein - Pichia
stipitis (Yeast)
Length = 124
Score = 56.0 bits (129), Expect = 5e-07
Identities = 29/90 (32%), Positives = 50/90 (55%)
Frame = +3
Query: 195 DIRPNHTIYXXXXXXXXXXXXXXXSLYAIFSQFGQILDIVAMKTLKMRGQAFVIFKEISS 374
+++P+ T+Y +LY +FS +G I+DI K RGQA +IF ++
Sbjct: 27 NLKPSQTLYIKNLNDKINPKIIKHNLYLLFSTYGDIIDIKNNK----RGQAHIIFTNVAG 82
Query: 375 ATVALRSMQGFPFYDKPMRIQYSKIDSDII 464
A++AL+ +Q F+DK + I Y+ +S I+
Sbjct: 83 ASLALKCLQDEEFFDKKLVINYAIKESKIV 112
>UniRef50_Q5K7D5 Cluster: RNA binding protein, putative; n=1;
Filobasidiella neoformans|Rep: RNA binding protein,
putative - Cryptococcus neoformans (Filobasidiella
neoformans)
Length = 285
Score = 54.8 bits (126), Expect = 1e-06
Identities = 26/69 (37%), Positives = 42/69 (60%)
Frame = +3
Query: 267 SLYAIFSQFGQILDIVAMKTLKMRGQAFVIFKEISSATVALRSMQGFPFYDKPMRIQYSK 446
+LY +F + + I+A ++MRGQAFV F +I SA A + + FP Y K ++I+++K
Sbjct: 78 TLYNLFKPYRPLQPIIAHHNIRMRGQAFVSFSDIESANEARKDVNEFPLYGKSIQIKFAK 137
Query: 447 IDSDIIAXK 473
SD I +
Sbjct: 138 GLSDSIVKR 146
>UniRef50_Q4PGF6 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 314
Score = 54.0 bits (124), Expect = 2e-06
Identities = 25/66 (37%), Positives = 38/66 (57%)
Frame = +3
Query: 267 SLYAIFSQFGQILDIVAMKTLKMRGQAFVIFKEISSATVALRSMQGFPFYDKPMRIQYSK 446
+L +FS + +L + A L+MRGQAFV ++ +A A R FP Y K M+I ++K
Sbjct: 70 TLTNLFSNYATVLSVTAHTNLRMRGQAFVSLDDVHAADKARREAHLFPLYGKAMKISFAK 129
Query: 447 IDSDII 464
SD +
Sbjct: 130 SKSDAV 135
>UniRef50_P40567 Cluster: U2 small nuclear ribonucleoprotein B'';
n=2; Saccharomyces cerevisiae|Rep: U2 small nuclear
ribonucleoprotein B'' - Saccharomyces cerevisiae
(Baker's yeast)
Length = 111
Score = 53.2 bits (122), Expect = 4e-06
Identities = 23/63 (36%), Positives = 43/63 (68%)
Frame = +3
Query: 267 SLYAIFSQFGQILDIVAMKTLKMRGQAFVIFKEISSATVALRSMQGFPFYDKPMRIQYSK 446
+L+ +F+ FG++L V+M K RGQAF+ + I A++A S+ G F+ KP+++++SK
Sbjct: 47 NLFLLFATFGEVLK-VSMNFKKQRGQAFITMRTIDQASLAQISLNGERFFGKPLKVEFSK 105
Query: 447 IDS 455
++
Sbjct: 106 SET 108
>UniRef50_A2FJ46 Cluster: Putative uncharacterized protein; n=1;
Trichomonas vaginalis G3|Rep: Putative uncharacterized
protein - Trichomonas vaginalis G3
Length = 186
Score = 52.8 bits (121), Expect = 5e-06
Identities = 27/87 (31%), Positives = 45/87 (51%)
Frame = +3
Query: 186 MTMDIRPNHTIYXXXXXXXXXXXXXXXSLYAIFSQFGQILDIVAMKTLKMRGQAFVIFKE 365
M+ I P+ T++ +LY +FS +++I A K + RGQA+V F
Sbjct: 1 MSKPIAPSQTLFVRNLTDKIPIDDLKRNLYYLFSSVAPVVEINARKG-QSRGQAWVSFPN 59
Query: 366 ISSATVALRSMQGFPFYDKPMRIQYSK 446
+ SA + ++ FPF K ++I+YSK
Sbjct: 60 LESAEIIMKQFNNFPFLGKALQIEYSK 86
>UniRef50_Q57XJ8 Cluster: U2 small nuclear ribonucleoprotein B,
putative; n=5; Trypanosomatidae|Rep: U2 small nuclear
ribonucleoprotein B, putative - Trypanosoma brucei
Length = 117
Score = 52.0 bits (119), Expect = 9e-06
Identities = 26/84 (30%), Positives = 43/84 (51%)
Frame = +3
Query: 204 PNHTIYXXXXXXXXXXXXXXXSLYAIFSQFGQILDIVAMKTLKMRGQAFVIFKEISSATV 383
P T+Y LY +QFG ++D++ K+ M GQAFV+F ++++AT
Sbjct: 4 PKQTLYIRGLPDKPSAEEVRRLLYLYCTQFGPVIDVLYCKSKSMYGQAFVVFTDVATATN 63
Query: 384 ALRSMQGFPFYDKPMRIQYSKIDS 455
A R + FY + ++ Y+K S
Sbjct: 64 ARRELHERQFYGRIIQAFYAKRQS 87
>UniRef50_Q22GW9 Cluster: Polypyrimidine tract-binding protein; n=1;
Tetrahymena thermophila SB210|Rep: Polypyrimidine
tract-binding protein - Tetrahymena thermophila SB210
Length = 829
Score = 50.8 bits (116), Expect = 2e-05
Identities = 24/61 (39%), Positives = 37/61 (60%)
Frame = +3
Query: 270 LYAIFSQFGQILDIVAMKTLKMRGQAFVIFKEISSATVALRSMQGFPFYDKPMRIQYSKI 449
LY +FS +G I+ I+ MK + QA + F+E S AT A ++ P+Y+ ++I YSK
Sbjct: 521 LYNLFSNYGNIVKIIFMK---QKRQALIEFEETSQATAAKENLNNLPYYNAQIKIDYSKY 577
Query: 450 D 452
D
Sbjct: 578 D 578
>UniRef50_A5DZH8 Cluster: Putative uncharacterized protein; n=1;
Lodderomyces elongisporus NRRL YB-4239|Rep: Putative
uncharacterized protein - Lodderomyces elongisporus
(Yeast) (Saccharomyces elongisporus)
Length = 234
Score = 47.6 bits (108), Expect = 2e-04
Identities = 21/91 (23%), Positives = 44/91 (48%)
Frame = +3
Query: 192 MDIRPNHTIYXXXXXXXXXXXXXXXSLYAIFSQFGQILDIVAMKTLKMRGQAFVIFKEIS 371
M P TIY +L + + +I+ KTL+++GQAF+ F++++
Sbjct: 1 MSSEPKRTIYLNNLNDKVSINKLRSNLATLLQPYNPT-NIIVAKTLRLKGQAFITFQDVT 59
Query: 372 SATVALRSMQGFPFYDKPMRIQYSKIDSDII 464
+A A+ + + K MR ++ +++D +
Sbjct: 60 NAQAAINQLNNKQLFSKSMRASFAHLENDAV 90
>UniRef50_Q6C8A0 Cluster: Similar to tr|O74968 Schizosaccharomyces
pombe Small nuclear ribonucleoprotein; n=1; Yarrowia
lipolytica|Rep: Similar to tr|O74968 Schizosaccharomyces
pombe Small nuclear ribonucleoprotein - Yarrowia
lipolytica (Candida lipolytica)
Length = 226
Score = 47.2 bits (107), Expect = 2e-04
Identities = 29/95 (30%), Positives = 43/95 (45%), Gaps = 3/95 (3%)
Frame = +3
Query: 198 IRPNHTIYXXXXXXXXXXXXXXXSLYAIFSQFGQILDIVAMKTLKMRGQAFVIFKEISSA 377
I P TIY +L I ++G +LD+VA L++RGQAFV+F I SA
Sbjct: 4 IAPCETIYIRNINEKIKIPTLKTTLKEICKEYGDVLDVVAHGNLRLRGQAFVVFDSIDSA 63
Query: 378 TVALRSMQGFP---FYDKPMRIQYSKIDSDIIAXK 473
A+ ++ + + Y+K SD K
Sbjct: 64 ESAISALNSTKVDGLKGSVVEVTYAKSPSDATMAK 98
>UniRef50_Q5CXS1 Cluster: U1 small nuclear ribonucleoprotein A, rrm
domain; n=2; Cryptosporidium|Rep: U1 small nuclear
ribonucleoprotein A, rrm domain - Cryptosporidium parvum
Iowa II
Length = 122
Score = 46.8 bits (106), Expect = 3e-04
Identities = 26/83 (31%), Positives = 40/83 (48%)
Frame = +3
Query: 207 NHTIYXXXXXXXXXXXXXXXSLYAIFSQFGQILDIVAMKTLKMRGQAFVIFKEISSATVA 386
N T+Y L+ +F QFG I I RGQAF++F++++ A A
Sbjct: 16 NKTLYCKNLNDKINKKDLKILLFELFIQFGLIDKITIRGGSPYRGQAFILFQDLNCAINA 75
Query: 387 LRSMQGFPFYDKPMRIQYSKIDS 455
S+ G KP+ I+Y+K +S
Sbjct: 76 KNSINGMNVLGKPIHIEYAKENS 98
>UniRef50_Q6FKR0 Cluster: Similarity; n=1; Candida glabrata|Rep:
Similarity - Candida glabrata (Yeast) (Torulopsis
glabrata)
Length = 118
Score = 46.0 bits (104), Expect = 6e-04
Identities = 21/84 (25%), Positives = 45/84 (53%)
Frame = +3
Query: 204 PNHTIYXXXXXXXXXXXXXXXSLYAIFSQFGQILDIVAMKTLKMRGQAFVIFKEISSATV 383
P +T+Y L+ +FS +G++L V + +R QAF+ + + A++
Sbjct: 32 PKNTLYIRNLNEKINTKRLRHGLFMLFSIYGEVLK-VTINFKALRAQAFITLRSVEEASL 90
Query: 384 ALRSMQGFPFYDKPMRIQYSKIDS 455
A +++G F++ P+ I++SK ++
Sbjct: 91 AKAALEGEVFFNIPLSIEFSKANT 114
>UniRef50_Q4RFZ2 Cluster: Chromosome undetermined SCAF15108, whole
genome shotgun sequence; n=2; Tetraodontidae|Rep:
Chromosome undetermined SCAF15108, whole genome shotgun
sequence - Tetraodon nigroviridis (Green puffer)
Length = 609
Score = 45.2 bits (102), Expect = 0.001
Identities = 22/58 (37%), Positives = 33/58 (56%)
Frame = +3
Query: 300 ILDIVAMKTLKMRGQAFVIFKEISSATVALRSMQGFPFYDKPMRIQYSKIDSDIIAXK 473
+ DI+ MK +M+GQAFV SA ALR G+ YDKP+ ++ +K ++ K
Sbjct: 437 MFDIMLMKEGRMKGQAFVGLPSEQSAEKALRETNGYVLYDKPLIVRLTKSKEEVWTDK 494
>UniRef50_Q6E6F7 Cluster: U1 small ribonucleoprotein; n=1;
Antonospora locustae|Rep: U1 small ribonucleoprotein -
Antonospora locustae (Nosema locustae)
Length = 175
Score = 44.8 bits (101), Expect = 0.001
Identities = 23/85 (27%), Positives = 38/85 (44%)
Frame = +3
Query: 192 MDIRPNHTIYXXXXXXXXXXXXXXXSLYAIFSQFGQILDIVAMKTLKMRGQAFVIFKEIS 371
M+ RP T+Y L + S++ ++D+ T+++RGQAFV FK
Sbjct: 1 MNNRPCRTLYFQNLNEKMNKSELARRLKMLVSRYAYVVDVTIWNTMRLRGQAFVTFKTTD 60
Query: 372 SATVALRSMQGFPFYDKPMRIQYSK 446
A + F F M+I ++K
Sbjct: 61 DAAKIKSILDNFFFLGTSMKIHFAK 85
>UniRef50_UPI0000DB7787 Cluster: PREDICTED: similar to RNA-binding
region (RNP1, RRM) containing 3; n=1; Apis
mellifera|Rep: PREDICTED: similar to RNA-binding region
(RNP1, RRM) containing 3 - Apis mellifera
Length = 403
Score = 44.0 bits (99), Expect = 0.002
Identities = 19/48 (39%), Positives = 30/48 (62%)
Frame = +3
Query: 306 DIVAMKTLKMRGQAFVIFKEISSATVALRSMQGFPFYDKPMRIQYSKI 449
D+ M+ +M+GQAF+ + + A +AL GF DKPM +Q++KI
Sbjct: 353 DVRLMQEGRMKGQAFITLQNVEQAQLALDETNGFILKDKPMVVQFAKI 400
>UniRef50_Q4U9D6 Cluster: RNA binding protein, putative; n=2;
Theileria|Rep: RNA binding protein, putative - Theileria
annulata
Length = 479
Score = 43.2 bits (97), Expect = 0.004
Identities = 25/62 (40%), Positives = 37/62 (59%), Gaps = 3/62 (4%)
Frame = +3
Query: 279 IFSQFGQILDI---VAMKTLKMRGQAFVIFKEISSATVALRSMQGFPFYDKPMRIQYSKI 449
IFS FG IL+I +T K++G FV +++ SA +AL SMQGF KP+++ +
Sbjct: 173 IFSSFGDILNIDLPTDPETNKVKGFCFVEYRKKESADLALVSMQGFHIKGKPIKLGRPNV 232
Query: 450 DS 455
S
Sbjct: 233 SS 234
>UniRef50_UPI00006A0975 Cluster: RNA-binding region (RNP1, RRM)
containing 3; n=1; Xenopus tropicalis|Rep: RNA-binding
region (RNP1, RRM) containing 3 - Xenopus tropicalis
Length = 536
Score = 42.7 bits (96), Expect = 0.005
Identities = 20/49 (40%), Positives = 31/49 (63%)
Frame = +3
Query: 300 ILDIVAMKTLKMRGQAFVIFKEISSATVALRSMQGFPFYDKPMRIQYSK 446
+ DI MK +M+GQAF+ F A AL+ + G+ +DKPM IQ+++
Sbjct: 473 MFDIRLMKEGRMKGQAFIGFPTEDVAAQALKHVHGYVLHDKPMVIQFAR 521
>UniRef50_A3AHI9 Cluster: Putative uncharacterized protein; n=1;
Oryza sativa (japonica cultivar-group)|Rep: Putative
uncharacterized protein - Oryza sativa subsp. japonica
(Rice)
Length = 537
Score = 42.7 bits (96), Expect = 0.005
Identities = 22/48 (45%), Positives = 28/48 (58%)
Frame = +3
Query: 303 LDIVAMKTLKMRGQAFVIFKEISSATVALRSMQGFPFYDKPMRIQYSK 446
L I M+ +MRGQAFV F + A AL + GF F KPM IQ+ +
Sbjct: 482 LSIKLMQEGRMRGQAFVTFPSVELAQRALNLVHGFVFKGKPMIIQFGR 529
>UniRef50_Q6CEQ5 Cluster: Similarities with tr|Q8ITY4 Caenorhabditis
elegans Putative uncharacterized protein; n=1; Yarrowia
lipolytica|Rep: Similarities with tr|Q8ITY4
Caenorhabditis elegans Putative uncharacterized protein
- Yarrowia lipolytica (Candida lipolytica)
Length = 113
Score = 42.7 bits (96), Expect = 0.005
Identities = 18/51 (35%), Positives = 32/51 (62%)
Frame = +3
Query: 270 LYAIFSQFGQILDIVAMKTLKMRGQAFVIFKEISSATVALRSMQGFPFYDK 422
LY +F +FG + I A RG AFV++++I AT A++++ GF + ++
Sbjct: 27 LYELFGRFGAVRQIRAGSEKDTRGTAFVVYEDIDDATEAVKTLSGFNYKNR 77
>UniRef50_Q55CC1 Cluster: Putative uncharacterized protein; n=1;
Dictyostelium discoideum AX4|Rep: Putative
uncharacterized protein - Dictyostelium discoideum AX4
Length = 578
Score = 42.3 bits (95), Expect = 0.007
Identities = 19/39 (48%), Positives = 25/39 (64%)
Frame = +3
Query: 330 KMRGQAFVIFKEISSATVALRSMQGFPFYDKPMRIQYSK 446
K+R QAF+ F I AT+AL QGF + KP+ I +SK
Sbjct: 538 KLRNQAFITFPTIQLATLALNQTQGFKLHQKPILILFSK 576
>UniRef50_UPI00015B592F Cluster: PREDICTED: hypothetical protein;
n=1; Nasonia vitripennis|Rep: PREDICTED: hypothetical
protein - Nasonia vitripennis
Length = 478
Score = 41.5 bits (93), Expect = 0.012
Identities = 18/44 (40%), Positives = 28/44 (63%)
Frame = +3
Query: 318 MKTLKMRGQAFVIFKEISSATVALRSMQGFPFYDKPMRIQYSKI 449
M+ +M+GQAFV I+ A +AL G+ DKPM +Q++K+
Sbjct: 432 MQEGRMKGQAFVTLPNIAQAQLALEETNGYILKDKPMVVQFAKV 475
>UniRef50_Q503D7 Cluster: Zgc:110682; n=2; Danio rerio|Rep:
Zgc:110682 - Danio rerio (Zebrafish) (Brachydanio rerio)
Length = 471
Score = 41.5 bits (93), Expect = 0.012
Identities = 20/62 (32%), Positives = 34/62 (54%), Gaps = 2/62 (3%)
Frame = +3
Query: 270 LYAIFSQFGQILDIVAMKTL--KMRGQAFVIFKEISSATVALRSMQGFPFYDKPMRIQYS 443
LY +FS +G++LD +KT + G AFV + A A+ + G F +P+ ++ S
Sbjct: 99 LYDLFSPYGKVLDCDKVKTKPSSLTGYAFVYMEHKEDAEQAIEGLHGTTFMGRPLAVELS 158
Query: 444 KI 449
K+
Sbjct: 159 KV 160
>UniRef50_UPI0000E80292 Cluster: PREDICTED: similar to RNA binding
motif protein 41; n=1; Gallus gallus|Rep: PREDICTED:
similar to RNA binding motif protein 41 - Gallus gallus
Length = 360
Score = 41.1 bits (92), Expect = 0.016
Identities = 21/61 (34%), Positives = 36/61 (59%), Gaps = 2/61 (3%)
Frame = +3
Query: 270 LYAIFSQFGQILDIVAMKTL--KMRGQAFVIFKEISSATVALRSMQGFPFYDKPMRIQYS 443
+ ++F++F Q + + L +MRGQAF+ F +I SA A+ + G+ KPM I++
Sbjct: 276 MVSLFARFQQDSTPIQFRLLSGRMRGQAFITFPDIQSAQDAMLLVNGYRLQGKPMVIEFG 335
Query: 444 K 446
K
Sbjct: 336 K 336
>UniRef50_A7QHK2 Cluster: Chromosome chr5 scaffold_98, whole genome
shotgun sequence; n=4; Vitis vinifera|Rep: Chromosome
chr5 scaffold_98, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 165
Score = 40.7 bits (91), Expect = 0.021
Identities = 20/48 (41%), Positives = 28/48 (58%)
Frame = +3
Query: 303 LDIVAMKTLKMRGQAFVIFKEISSATVALRSMQGFPFYDKPMRIQYSK 446
L + M+ +MRGQAFV F + A AL + G+ F KPM IQ+ +
Sbjct: 110 LSVKLMQEGRMRGQAFVTFPSVELAHHALNLVNGYVFKGKPMIIQFGR 157
>UniRef50_Q6IRQ4 Cluster: MGC82187 protein; n=6; Tetrapoda|Rep:
MGC82187 protein - Xenopus laevis (African clawed frog)
Length = 370
Score = 40.3 bits (90), Expect = 0.028
Identities = 20/60 (33%), Positives = 37/60 (61%), Gaps = 3/60 (5%)
Frame = +3
Query: 267 SLYAIFSQFGQILDIVAMK---TLKMRGQAFVIFKEISSATVALRSMQGFPFYDKPMRIQ 437
+L A+F ++G++++++ MK T K RG AFV F+ + A A R + G KP++++
Sbjct: 23 ALEAVFCKYGRVVEVLLMKDRETNKSRGFAFVTFESPADAKDAARELNGKALDGKPIKVE 82
>UniRef50_Q14011 Cluster: Cold-inducible RNA-binding protein; n=62;
Eukaryota|Rep: Cold-inducible RNA-binding protein - Homo
sapiens (Human)
Length = 172
Score = 40.3 bits (90), Expect = 0.028
Identities = 23/67 (34%), Positives = 37/67 (55%), Gaps = 3/67 (4%)
Frame = +3
Query: 267 SLYAIFSQFGQILDIVAMK---TLKMRGQAFVIFKEISSATVALRSMQGFPFYDKPMRIQ 437
SL +FS++GQI ++V +K T + RG FV F+ I A A+ +M G + +R+
Sbjct: 21 SLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAMNGKSVDGRQIRVD 80
Query: 438 YSKIDSD 458
+ SD
Sbjct: 81 QAGKSSD 87
>UniRef50_Q4N8H4 Cluster: RNA-binding protein, putative; n=2;
Theileria|Rep: RNA-binding protein, putative - Theileria
parva
Length = 539
Score = 39.1 bits (87), Expect = 0.065
Identities = 20/60 (33%), Positives = 32/60 (53%), Gaps = 3/60 (5%)
Frame = +3
Query: 270 LYAIFSQFGQILDI---VAMKTLKMRGQAFVIFKEISSATVALRSMQGFPFYDKPMRIQY 440
L+ FS FG+++ + T + +G AFV + SAT A+ +M GF K +R+ Y
Sbjct: 470 LFRTFSPFGRVVQARIAIDRSTNRSKGYAFVSYDNPESATQAVANMNGFTIMGKKLRVNY 529
>UniRef50_A7RZI8 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 476
Score = 39.1 bits (87), Expect = 0.065
Identities = 19/47 (40%), Positives = 28/47 (59%)
Frame = +3
Query: 306 DIVAMKTLKMRGQAFVIFKEISSATVALRSMQGFPFYDKPMRIQYSK 446
DI MK +M+GQAFV A ALR + G+ + KP+ IQ+++
Sbjct: 422 DIRLMKEGRMKGQAFVTLPSEEKAKRALREVHGYMLHGKPIVIQFAR 468
>UniRef50_A4H9C2 Cluster: Putative uncharacterized protein; n=2;
Leishmania braziliensis|Rep: Putative uncharacterized
protein - Leishmania braziliensis
Length = 347
Score = 39.1 bits (87), Expect = 0.065
Identities = 23/66 (34%), Positives = 34/66 (51%), Gaps = 3/66 (4%)
Frame = +3
Query: 270 LYAIFSQFGQILDIVAMKTL---KMRGQAFVIFKEISSATVALRSMQGFPFYDKPMRIQY 440
L AIFS FG I + M+ + + G AFV +++ A ALR G P K + +Q+
Sbjct: 42 LRAIFSAFGNITSSMVMRDIYSGQSLGTAFVRYEKHEEALRALRDAHGMPLLGKTVSVQW 101
Query: 441 SKIDSD 458
+K D
Sbjct: 102 AKQQHD 107
>UniRef50_Q96JI8 Cluster: KIAA1839 protein; n=28; Euteleostomi|Rep:
KIAA1839 protein - Homo sapiens (Human)
Length = 541
Score = 39.1 bits (87), Expect = 0.065
Identities = 21/60 (35%), Positives = 33/60 (55%), Gaps = 2/60 (3%)
Frame = +3
Query: 273 YAIFSQFGQ--ILDIVAMKTLKMRGQAFVIFKEISSATVALRSMQGFPFYDKPMRIQYSK 446
Y FS Q + DI MK +M+GQAF+ +A AL+ G+ + KPM +Q+++
Sbjct: 467 YVDFSSETQRIMFDIRLMKEGRMKGQAFIGLPNEKAAAKALKEANGYVLFGKPMVVQFAR 526
>UniRef50_A5DY14 Cluster: Putative uncharacterized protein; n=1;
Lodderomyces elongisporus NRRL YB-4239|Rep: Putative
uncharacterized protein - Lodderomyces elongisporus
(Yeast) (Saccharomyces elongisporus)
Length = 105
Score = 39.1 bits (87), Expect = 0.065
Identities = 22/74 (29%), Positives = 36/74 (48%), Gaps = 5/74 (6%)
Frame = +3
Query: 267 SLYAIFSQFGQILDIVAMKTLKMRGQAFVIFKEISSATVALRSMQGFPFYDKPM-----R 431
S+Y FSQ+G I + + +GQ F+I+ I SA A + G F + + +
Sbjct: 19 SIYDFFSQYGHIYQVRTSTKEQHQGQVFIIYDNIQSAERAAKEANGVNFQGRYLVTSIYQ 78
Query: 432 IQYSKIDSDIIAXK 473
+ SKID ++ K
Sbjct: 79 VDKSKIDQKVMTLK 92
>UniRef50_Q8MLU3 Cluster: CG30327-PA; n=2; Drosophila
melanogaster|Rep: CG30327-PA - Drosophila melanogaster
(Fruit fly)
Length = 407
Score = 38.3 bits (85), Expect = 0.11
Identities = 23/62 (37%), Positives = 35/62 (56%), Gaps = 3/62 (4%)
Frame = +3
Query: 270 LYAIFSQFGQILDIVAMKTLKMRGQAFVIFKEISSATV---ALRSMQGFPFYDKPMRIQY 440
LYA ++ + LDI M +M+GQAFV F + ++ + AL G ++DKPM + Y
Sbjct: 345 LYAKYTAASK-LDIKVMHQGRMKGQAFVTFLDANNPEIIAQALNETNGLLWHDKPMIVCY 403
Query: 441 SK 446
K
Sbjct: 404 GK 405
>UniRef50_Q5TWC9 Cluster: ENSANGP00000026708; n=1; Anopheles gambiae
str. PEST|Rep: ENSANGP00000026708 - Anopheles gambiae
str. PEST
Length = 279
Score = 38.3 bits (85), Expect = 0.11
Identities = 21/50 (42%), Positives = 30/50 (60%), Gaps = 2/50 (4%)
Frame = +3
Query: 303 LDIVAMKTLKMRGQAFVIF--KEISSATVALRSMQGFPFYDKPMRIQYSK 446
++I MKT +M+GQAFV F K + AL ++ G+ DKPM + Y K
Sbjct: 228 MEIKLMKTGRMKGQAFVTFVPKFKNCIDQALATVNGYILKDKPMVVSYGK 277
>UniRef50_Q5CRM8 Cluster: T8M16_190-plant like protein with RRM
domain; n=2; Cryptosporidium|Rep: T8M16_190-plant like
protein with RRM domain - Cryptosporidium parvum Iowa II
Length = 600
Score = 38.3 bits (85), Expect = 0.11
Identities = 21/44 (47%), Positives = 28/44 (63%), Gaps = 1/44 (2%)
Frame = +3
Query: 267 SLYAIFSQFGQILD-IVAMKTLKMRGQAFVIFKEISSATVALRS 395
S+ +FSQFG + + IV K K RG AFV FK I SA +A ++
Sbjct: 112 SVIEVFSQFGDVEEGIVLKKDGKSRGYAFVTFKTIESALLACKN 155
>UniRef50_Q4QE24 Cluster: Putative uncharacterized protein; n=4;
Leishmania|Rep: Putative uncharacterized protein -
Leishmania major
Length = 348
Score = 38.3 bits (85), Expect = 0.11
Identities = 22/66 (33%), Positives = 34/66 (51%), Gaps = 3/66 (4%)
Frame = +3
Query: 270 LYAIFSQFGQILDIVAMKTL---KMRGQAFVIFKEISSATVALRSMQGFPFYDKPMRIQY 440
L IFS FG+I + M+ + + G AFV ++E A A+R G P K + +Q+
Sbjct: 35 LREIFSAFGKITSSMVMRDIYNGQSLGTAFVRYEEHEEALRAMRDAHGMPLLGKTVSVQW 94
Query: 441 SKIDSD 458
+K D
Sbjct: 95 AKQQHD 100
>UniRef50_Q4MZ00 Cluster: Splicing factor, putative; n=2;
Theileria|Rep: Splicing factor, putative - Theileria
parva
Length = 644
Score = 38.3 bits (85), Expect = 0.11
Identities = 20/65 (30%), Positives = 33/65 (50%), Gaps = 2/65 (3%)
Frame = +3
Query: 270 LYAIFSQFGQILDIVAMKT--LKMRGQAFVIFKEISSATVALRSMQGFPFYDKPMRIQYS 443
L +FS FG I+D+ +T +G A++ FK + A AL M GF + +++ Y+
Sbjct: 439 LNQLFSPFGNIIDVALARTDDGNSKGYAYIRFKRWNEAKEALNVMNGFDINGQQIKVAYA 498
Query: 444 KIDSD 458
D
Sbjct: 499 NTRKD 503
>UniRef50_Q4PBP1 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 638
Score = 38.3 bits (85), Expect = 0.11
Identities = 21/54 (38%), Positives = 31/54 (57%)
Frame = +3
Query: 282 FSQFGQILDIVAMKTLKMRGQAFVIFKEISSATVALRSMQGFPFYDKPMRIQYS 443
F QFGQI M + RG AF+ + ++ SA A+ +M+G F +P+ I YS
Sbjct: 267 FEQFGQIKTFFDM--VNKRGIAFITYYDLRSARDAMLAMKGALFGGRPINIHYS 318
>UniRef50_Q66IT0 Cluster: MGC84815 protein; n=1; Xenopus laevis|Rep:
MGC84815 protein - Xenopus laevis (African clawed frog)
Length = 291
Score = 37.9 bits (84), Expect = 0.15
Identities = 22/43 (51%), Positives = 27/43 (62%), Gaps = 3/43 (6%)
Frame = +3
Query: 267 SLYAIFSQFGQILDIVAMK---TLKMRGQAFVIFKEISSATVA 386
SL A +SQ+G+I D+V MK + K RG FV FKE SS A
Sbjct: 28 SLRAYYSQWGEITDVVVMKDPRSNKSRGFGFVTFKEASSVDKA 70
>UniRef50_Q4YUU2 Cluster: Cyclophilin, putative; n=4;
Plasmodium|Rep: Cyclophilin, putative - Plasmodium
berghei
Length = 134
Score = 37.9 bits (84), Expect = 0.15
Identities = 24/62 (38%), Positives = 33/62 (53%), Gaps = 3/62 (4%)
Frame = +3
Query: 270 LYAIFSQFGQILDI---VAMKTLKMRGQAFVIFKEISSATVALRSMQGFPFYDKPMRIQY 440
LY IFS FG I +I + + T K RG AF+ + E A AL +M F K + + Y
Sbjct: 23 LYDIFSSFGDIRNIEIPMNLVTNKHRGFAFIEYVEKDDAKHALYNMSNFELNGKIITVNY 82
Query: 441 SK 446
S+
Sbjct: 83 SR 84
>UniRef50_Q6ZR81 Cluster: CDNA FLJ46566 fis, clone THYMU3040829,
moderately similar to Cold- inducible RNA-binding
protein; n=1; Homo sapiens|Rep: CDNA FLJ46566 fis, clone
THYMU3040829, moderately similar to Cold- inducible
RNA-binding protein - Homo sapiens (Human)
Length = 135
Score = 37.9 bits (84), Expect = 0.15
Identities = 20/49 (40%), Positives = 30/49 (61%), Gaps = 3/49 (6%)
Frame = +3
Query: 267 SLYAIFSQFGQILDIVAMK---TLKMRGQAFVIFKEISSATVALRSMQG 404
SL +FS++GQI ++V +K T + RG FV F+ I A A+ +M G
Sbjct: 21 SLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAMNG 69
>UniRef50_UPI0000498E5C Cluster: RNA-binding protein; n=1; Entamoeba
histolytica HM-1:IMSS|Rep: RNA-binding protein -
Entamoeba histolytica HM-1:IMSS
Length = 291
Score = 37.5 bits (83), Expect = 0.20
Identities = 20/59 (33%), Positives = 35/59 (59%)
Frame = +3
Query: 270 LYAIFSQFGQILDIVAMKTLKMRGQAFVIFKEISSATVALRSMQGFPFYDKPMRIQYSK 446
++ IFSQFG+I DI +T + F+ F ++ SA AL++M K ++I++S+
Sbjct: 122 IHQIFSQFGEIKDI--RQTPNKKHHRFIEFFDLRSAEKALKTMNKSELNGKKLKIEFSR 178
>UniRef50_Q1LV83 Cluster: Novel protein; n=4; Danio rerio|Rep: Novel
protein - Danio rerio (Zebrafish) (Brachydanio rerio)
Length = 865
Score = 37.5 bits (83), Expect = 0.20
Identities = 22/60 (36%), Positives = 35/60 (58%), Gaps = 2/60 (3%)
Frame = +3
Query: 270 LYAIFSQFGQILDI-VAMKTL-KMRGQAFVIFKEISSATVALRSMQGFPFYDKPMRIQYS 443
L IFS+FG +L+ + +K K RG AFV+FK + A AL +M G D+ + + ++
Sbjct: 252 LKQIFSEFGTVLEAKIPLKPDGKKRGFAFVLFKRMPEAGKALTAMNGKKIKDRQVAVDWA 311
Score = 33.9 bits (74), Expect = 2.4
Identities = 21/65 (32%), Positives = 37/65 (56%), Gaps = 2/65 (3%)
Frame = +3
Query: 270 LYAIFSQFGQILDI-VAMKTL-KMRGQAFVIFKEISSATVALRSMQGFPFYDKPMRIQYS 443
L IFS+FG +L+ + +K K +G AFV FK +S A A +M D+P+ + ++
Sbjct: 140 LKQIFSKFGTVLETRIPLKPDGKKKGFAFVQFKCVSEAEKARAAMNRKAIRDRPVEVDWT 199
Query: 444 KIDSD 458
+++
Sbjct: 200 TSNTE 204
>UniRef50_Q6ID24 Cluster: At4g12630; n=6; Arabidopsis thaliana|Rep:
At4g12630 - Arabidopsis thaliana (Mouse-ear cress)
Length = 117
Score = 37.5 bits (83), Expect = 0.20
Identities = 21/55 (38%), Positives = 32/55 (58%)
Frame = +3
Query: 282 FSQFGQILDIVAMKTLKMRGQAFVIFKEISSATVALRSMQGFPFYDKPMRIQYSK 446
F +FG+ L+ +A + R AFV F A A+ S+QGFP P+RI+++K
Sbjct: 43 FLRFGE-LESLAFQP--GRSYAFVNFNHDEDAFAAIESLQGFPLSGNPLRIEFAK 94
>UniRef50_Q6C3A0 Cluster: Similarity; n=1; Yarrowia lipolytica|Rep:
Similarity - Yarrowia lipolytica (Candida lipolytica)
Length = 190
Score = 37.5 bits (83), Expect = 0.20
Identities = 17/64 (26%), Positives = 36/64 (56%)
Frame = +3
Query: 267 SLYAIFSQFGQILDIVAMKTLKMRGQAFVIFKEISSATVALRSMQGFPFYDKPMRIQYSK 446
+++++F FG I+++ K V F+E A A+ +M G+ + KP+R++ +K
Sbjct: 19 TVHSLFLSFGPIVEVNLHKRPSGIQHGSVQFEEAEDAAAAVDNMGGYDLFGKPLRVRLAK 78
Query: 447 IDSD 458
D++
Sbjct: 79 GDTE 82
>UniRef50_Q4KLD9 Cluster: MGC116464 protein; n=1; Xenopus
laevis|Rep: MGC116464 protein - Xenopus laevis (African
clawed frog)
Length = 391
Score = 37.1 bits (82), Expect = 0.26
Identities = 26/68 (38%), Positives = 38/68 (55%), Gaps = 5/68 (7%)
Frame = +3
Query: 270 LYAIFSQFGQILDIVA-MKTLKM---RGQAFVIFKEISSATVALRSMQGFPFYDKPMRIQ 437
L+ FSQFG ++ MK + +G AFV F A A++SM G FY+K + +Q
Sbjct: 114 LFDTFSQFGNLISTPKIMKDPESGGSKGFAFVSFDSFDGADHAIQSMNGQFFYNKQIVVQ 173
Query: 438 YS-KIDSD 458
Y+ K DS+
Sbjct: 174 YAYKKDSN 181
>UniRef50_Q387J8 Cluster: RNA-binding protein, putative; n=3;
Trypanosoma|Rep: RNA-binding protein, putative -
Trypanosoma brucei
Length = 200
Score = 37.1 bits (82), Expect = 0.26
Identities = 21/71 (29%), Positives = 41/71 (57%), Gaps = 3/71 (4%)
Frame = +3
Query: 270 LYAIFSQFGQI--LDIVAMK-TLKMRGQAFVIFKEISSATVALRSMQGFPFYDKPMRIQY 440
L+ +F+QFG I + I+ K T + RG FV + SAT A++ + G+P K +++ +
Sbjct: 94 LFQLFAQFGPIESVKIIYDKVTRESRGYGFVKYMYFFSATYAVQWLNGYPIAGKRLKVAF 153
Query: 441 SKIDSDIIAXK 473
+ ++ + + K
Sbjct: 154 ANAEAAMESYK 164
>UniRef50_A5K2K1 Cluster: RNA-binding protein, putative; n=8;
Plasmodium|Rep: RNA-binding protein, putative -
Plasmodium vivax
Length = 513
Score = 37.1 bits (82), Expect = 0.26
Identities = 23/62 (37%), Positives = 33/62 (53%), Gaps = 3/62 (4%)
Frame = +3
Query: 270 LYAIFSQFGQILD--IVAMK-TLKMRGQAFVIFKEISSATVALRSMQGFPFYDKPMRIQY 440
L FS FG++L I K T + RG AFV ++ I SA A+ M GF +K +++
Sbjct: 388 LIQAFSPFGELLSARIATEKSTGRNRGFAFVSYESIESAAAAISQMNGFMALNKKLKVTV 447
Query: 441 SK 446
K
Sbjct: 448 KK 449
>UniRef50_A7TFW1 Cluster: Putative uncharacterized protein; n=1;
Vanderwaltozyma polyspora DSM 70294|Rep: Putative
uncharacterized protein - Vanderwaltozyma polyspora DSM
70294
Length = 415
Score = 37.1 bits (82), Expect = 0.26
Identities = 22/61 (36%), Positives = 35/61 (57%), Gaps = 1/61 (1%)
Frame = +3
Query: 270 LYAIFSQFGQILDIVAMKTLK-MRGQAFVIFKEISSATVALRSMQGFPFYDKPMRIQYSK 446
L IF+ FG +MK +K + G AFV F++ SA A+ + G F D+P+ + YS+
Sbjct: 133 LNEIFAPFG------SMKEVKILNGFAFVEFEDSESAAKAIEEVNGKTFADQPLEVVYSR 186
Query: 447 I 449
+
Sbjct: 187 V 187
>UniRef50_A7NYH5 Cluster: Chromosome chr6 scaffold_3, whole genome
shotgun sequence; n=12; Eukaryota|Rep: Chromosome chr6
scaffold_3, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 429
Score = 36.7 bits (81), Expect = 0.35
Identities = 18/60 (30%), Positives = 37/60 (61%), Gaps = 3/60 (5%)
Frame = +3
Query: 270 LYAIFSQFGQILDIVAMK---TLKMRGQAFVIFKEISSATVALRSMQGFPFYDKPMRIQY 440
L A+FSQ+G+I+D+ ++ T K +G AFV +++ S +A+ ++ G + +R+ +
Sbjct: 52 LLAVFSQYGEIVDVNLVRDKGTGKSKGFAFVAYEDQRSTNLAVDNLNGAQILGRIIRVDH 111
>UniRef50_Q4QA88 Cluster: Poly(A)-binding protein, putative; n=3;
Leishmania|Rep: Poly(A)-binding protein, putative -
Leishmania major
Length = 544
Score = 36.7 bits (81), Expect = 0.35
Identities = 22/63 (34%), Positives = 34/63 (53%), Gaps = 4/63 (6%)
Frame = +3
Query: 270 LYAIFSQFGQILDIVAMKTLK--MRGQAFVIFKEISSATVALRSMQGFPFYD--KPMRIQ 437
L IF FG+I MK ++G AFV F++ A+ ALRS+ G P KP+ +
Sbjct: 305 LREIFEPFGKITSCAIMKEPNGTLKGFAFVCFEDKQHASAALRSLNGHPLEHSAKPLYVS 364
Query: 438 YSK 446
+++
Sbjct: 365 HAE 367
>UniRef50_A2DSN3 Cluster: Putative uncharacterized protein; n=1;
Trichomonas vaginalis G3|Rep: Putative uncharacterized
protein - Trichomonas vaginalis G3
Length = 280
Score = 36.7 bits (81), Expect = 0.35
Identities = 18/59 (30%), Positives = 33/59 (55%), Gaps = 3/59 (5%)
Frame = +3
Query: 279 IFSQFGQILDIVAMKT---LKMRGQAFVIFKEISSATVALRSMQGFPFYDKPMRIQYSK 446
+F +G IL + T ++ RG AFV F++ A A+ + G F++ +R+Q++K
Sbjct: 31 VFEPYGTILTAFIVNTRGTVRSRGIAFVEFEKHEQAEAAMAATNGMKFWENQIRVQWAK 89
>UniRef50_Q5KBA9 Cluster: Putative uncharacterized protein; n=1;
Filobasidiella neoformans|Rep: Putative uncharacterized
protein - Cryptococcus neoformans (Filobasidiella
neoformans)
Length = 373
Score = 36.3 bits (80), Expect = 0.46
Identities = 17/62 (27%), Positives = 38/62 (61%), Gaps = 3/62 (4%)
Frame = +3
Query: 270 LYAIFSQFGQILDIVAMK---TLKMRGQAFVIFKEISSATVALRSMQGFPFYDKPMRIQY 440
L IFSQ+G+I+D+ ++ T K RG F+++++ S +A+ +M G + +++ +
Sbjct: 47 LITIFSQWGEIMDVNLVRDKETGKSRGFGFLMYEDQRSTVLAVDNMNGTQVIGRTLKVDH 106
Query: 441 SK 446
++
Sbjct: 107 TR 108
>UniRef50_Q01560 Cluster: Nucleolar protein 3; n=7; Fungi/Metazoa
group|Rep: Nucleolar protein 3 - Saccharomyces
cerevisiae (Baker's yeast)
Length = 414
Score = 36.3 bits (80), Expect = 0.46
Identities = 18/45 (40%), Positives = 28/45 (62%), Gaps = 1/45 (2%)
Frame = +3
Query: 318 MKTLK-MRGQAFVIFKEISSATVALRSMQGFPFYDKPMRIQYSKI 449
MK +K + G AFV F+E SA A+ + G F ++P+ + YSK+
Sbjct: 151 MKEVKILNGFAFVEFEEAESAAKAIEEVHGKSFANQPLEVVYSKL 195
>UniRef50_O83375 Cluster: RNA-binding protein, putative; n=1;
Treponema pallidum|Rep: RNA-binding protein, putative -
Treponema pallidum
Length = 105
Score = 35.9 bits (79), Expect = 0.60
Identities = 17/62 (27%), Positives = 34/62 (54%), Gaps = 3/62 (4%)
Frame = +3
Query: 270 LYAIFSQFGQILDIVAMK---TLKMRGQAFVIFKEISSATVALRSMQGFPFYDKPMRIQY 440
L ++FSQFG++L + +K T + +G FV + SA + + + F + +R+ Y
Sbjct: 35 LASLFSQFGEVLSVAVIKDKLTQRSKGFGFVEMESAESAELVINELNEKEFEGRRLRVNY 94
Query: 441 SK 446
++
Sbjct: 95 AE 96
>UniRef50_Q6FIQ5 Cluster: Candida glabrata strain CBS138 chromosome
M complete sequence; n=1; Candida glabrata|Rep: Candida
glabrata strain CBS138 chromosome M complete sequence -
Candida glabrata (Yeast) (Torulopsis glabrata)
Length = 299
Score = 35.9 bits (79), Expect = 0.60
Identities = 19/45 (42%), Positives = 28/45 (62%), Gaps = 2/45 (4%)
Frame = +3
Query: 270 LYAIFSQFGQILDI--VAMKTLKMRGQAFVIFKEISSATVALRSM 398
L +F+++G+I+ + V K K RG AFV+FKE SA V R +
Sbjct: 131 LQKVFAKYGEIVRVRVVRDKQNKSRGYAFVLFKETDSARVCTRDI 175
>UniRef50_Q9FXE0 Cluster: F12A21.10; n=1; Arabidopsis thaliana|Rep:
F12A21.10 - Arabidopsis thaliana (Mouse-ear cress)
Length = 527
Score = 35.5 bits (78), Expect = 0.80
Identities = 22/60 (36%), Positives = 32/60 (53%)
Frame = +3
Query: 267 SLYAIFSQFGQILDIVAMKTLKMRGQAFVIFKEISSATVALRSMQGFPFYDKPMRIQYSK 446
+L IF +G++ + +T R Q FV F ++ A ALR M G KPM IQ+S+
Sbjct: 198 TLRHIFQVYGEVKQV--RETPCKREQRFVEFFDVRDAAKALRVMNGKVISGKPMVIQFSR 255
>UniRef50_Q014L5 Cluster: Cyclophilin-type peptidyl-prolyl cis-trans
isomerase; n=1; Ostreococcus tauri|Rep: Cyclophilin-type
peptidyl-prolyl cis-trans isomerase - Ostreococcus tauri
Length = 252
Score = 35.5 bits (78), Expect = 0.80
Identities = 18/57 (31%), Positives = 35/57 (61%), Gaps = 3/57 (5%)
Frame = +3
Query: 279 IFSQFGQILDIVAMK---TLKMRGQAFVIFKEISSATVALRSMQGFPFYDKPMRIQY 440
+FSQFG+I+D+ ++ T K RG AFV + + S +A+ ++ G + +R+++
Sbjct: 55 VFSQFGEIVDVNVVREEETGKSRGFAFVCYADQRSTVLAVDNLNGSTVGGRIIRVEH 111
>UniRef50_Q7RNK1 Cluster: Ribonucleoprotein homolog
F21B7.26-Arabidopsis thaliana-related; n=5;
Plasmodium|Rep: Ribonucleoprotein homolog
F21B7.26-Arabidopsis thaliana-related - Plasmodium
yoelii yoelii
Length = 507
Score = 35.5 bits (78), Expect = 0.80
Identities = 23/62 (37%), Positives = 33/62 (53%), Gaps = 3/62 (4%)
Frame = +3
Query: 270 LYAIFSQFGQILD--IVAMK-TLKMRGQAFVIFKEISSATVALRSMQGFPFYDKPMRIQY 440
L A FS FG I+ I K T + RG AFV + + SA A++ M GF + K +++
Sbjct: 414 LLAAFSPFGNIISAYIATEKDTGRNRGFAFVSYDNVDSAINAVKYMNGFLAHKKKLKVTI 473
Query: 441 SK 446
K
Sbjct: 474 KK 475
>UniRef50_Q7R663 Cluster: GLP_574_154581_155147; n=1; Giardia
lamblia ATCC 50803|Rep: GLP_574_154581_155147 - Giardia
lamblia ATCC 50803
Length = 188
Score = 35.5 bits (78), Expect = 0.80
Identities = 18/61 (29%), Positives = 33/61 (54%), Gaps = 2/61 (3%)
Frame = +3
Query: 282 FSQFGQILDIVAM--KTLKMRGQAFVIFKEISSATVALRSMQGFPFYDKPMRIQYSKIDS 455
FSQFG++L + K K RG +V F + A +A +M + ++K +++ Y + +
Sbjct: 29 FSQFGKVLQVRVSRNKEQKSRGYGYVKFASRAVAKIAAETMNNYLMFNKILKVSYLETWN 88
Query: 456 D 458
D
Sbjct: 89 D 89
>UniRef50_Q18318 Cluster: Putative uncharacterized protein C30B5.4;
n=2; Caenorhabditis|Rep: Putative uncharacterized
protein C30B5.4 - Caenorhabditis elegans
Length = 302
Score = 35.5 bits (78), Expect = 0.80
Identities = 16/58 (27%), Positives = 36/58 (62%), Gaps = 3/58 (5%)
Frame = +3
Query: 276 AIFSQFGQILDIVAMK---TLKMRGQAFVIFKEISSATVALRSMQGFPFYDKPMRIQY 440
A+FSQ+G++++I ++ T K +G AF+ +K+ S +A+ + G + + +R+ +
Sbjct: 56 AVFSQYGEVMNINLIRDKDTGKSKGFAFLCYKDQRSTILAVDNFNGISLHKRMIRVDH 113
>UniRef50_A7EXD1 Cluster: Putative uncharacterized protein; n=3;
Fungi/Metazoa group|Rep: Putative uncharacterized
protein - Sclerotinia sclerotiorum 1980
Length = 194
Score = 35.5 bits (78), Expect = 0.80
Identities = 15/57 (26%), Positives = 31/57 (54%)
Frame = +3
Query: 270 LYAIFSQFGQILDIVAMKTLKMRGQAFVIFKEISSATVALRSMQGFPFYDKPMRIQY 440
L+ +F +FG I I +G AFV++++++ + A + GF F ++ + + Y
Sbjct: 29 LFDLFGKFGAIRQIRQGIATNTKGTAFVVYEDVTDSKTACDKLNGFNFQNRYLVVLY 85
>UniRef50_A7PHW6 Cluster: Chromosome chr13 scaffold_17, whole genome
shotgun sequence; n=2; Vitis vinifera|Rep: Chromosome
chr13 scaffold_17, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 313
Score = 35.1 bits (77), Expect = 1.1
Identities = 19/48 (39%), Positives = 25/48 (52%), Gaps = 3/48 (6%)
Frame = +3
Query: 270 LYAIFSQFGQILDIVAMK---TLKMRGQAFVIFKEISSATVALRSMQG 404
L+ IFS FG++ + +K T RG AFV+F A A R M G
Sbjct: 130 LFTIFSTFGKVAKVTILKDRHTRHSRGVAFVLFVSRDEAIAAAREMNG 177
>UniRef50_Q8IS70 Cluster: Nucleolin-like protein; n=1; Euprymna
scolopes|Rep: Nucleolin-like protein - Euprymna scolopes
Length = 161
Score = 35.1 bits (77), Expect = 1.1
Identities = 15/43 (34%), Positives = 25/43 (58%)
Frame = +3
Query: 318 MKTLKMRGQAFVIFKEISSATVALRSMQGFPFYDKPMRIQYSK 446
M+ ++RGQAF+ A VAL GF + +PM +Q+++
Sbjct: 109 MQEGRIRGQAFITLPNEEVAKVALEDTNGFVLHSRPMVVQFAR 151
>UniRef50_Q86AS4 Cluster: Similar to Dictyostelium discoideum (Slime
mold). Homeobox-containing protein; n=2; Dictyostelium
discoideum|Rep: Similar to Dictyostelium discoideum
(Slime mold). Homeobox-containing protein - Dictyostelium
discoideum (Slime mold)
Length = 1104
Score = 35.1 bits (77), Expect = 1.1
Identities = 16/48 (33%), Positives = 29/48 (60%)
Frame = +3
Query: 306 DIVAMKTLKMRGQAFVIFKEISSATVALRSMQGFPFYDKPMRIQYSKI 449
+I +++ L+ + AFV F I +AT AL+++ G D +R+ Y K+
Sbjct: 1036 EIESIRILRKKACAFVNFMNIPNATAALQTLNGKKLGDTIVRVNYGKV 1083
>UniRef50_Q4N0S1 Cluster: Putative uncharacterized protein; n=1;
Theileria parva|Rep: Putative uncharacterized protein -
Theileria parva
Length = 288
Score = 35.1 bits (77), Expect = 1.1
Identities = 16/29 (55%), Positives = 22/29 (75%)
Frame = +3
Query: 318 MKTLKMRGQAFVIFKEISSATVALRSMQG 404
MK+ RGQA+VI+ I+SAT AL+ +QG
Sbjct: 1 MKSFWRRGQAWVIYDNINSATEALKELQG 29
>UniRef50_Q759G9 Cluster: ADR307Wp; n=1; Eremothecium gossypii|Rep:
ADR307Wp - Ashbya gossypii (Yeast) (Eremothecium
gossypii)
Length = 566
Score = 35.1 bits (77), Expect = 1.1
Identities = 22/59 (37%), Positives = 32/59 (54%)
Frame = +3
Query: 270 LYAIFSQFGQILDIVAMKTLKMRGQAFVIFKEISSATVALRSMQGFPFYDKPMRIQYSK 446
L A F FGQI V +K +G FV + + SSA A+ MQGFP + +R+ + +
Sbjct: 298 LRAYFQPFGQI---VYVKIPVGKGCGFVQYVDRSSAENAIAKMQGFPIGNSRVRLSWGR 353
>UniRef50_Q14498 Cluster: RNA-binding protein 39; n=55;
Euteleostomi|Rep: RNA-binding protein 39 - Homo sapiens
(Human)
Length = 530
Score = 35.1 bits (77), Expect = 1.1
Identities = 19/58 (32%), Positives = 29/58 (50%), Gaps = 3/58 (5%)
Frame = +3
Query: 270 LYAIFSQFGQILDIVAM---KTLKMRGQAFVIFKEISSATVALRSMQGFPFYDKPMRI 434
L IF FG+I I M +T + +G F+ F + A AL + GF +PM++
Sbjct: 266 LRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQLNGFELAGRPMKV 323
>UniRef50_Q5BSD0 Cluster: SJCHGC05002 protein; n=1; Schistosoma
japonicum|Rep: SJCHGC05002 protein - Schistosoma
japonicum (Blood fluke)
Length = 152
Score = 34.7 bits (76), Expect = 1.4
Identities = 14/39 (35%), Positives = 26/39 (66%)
Frame = +3
Query: 330 KMRGQAFVIFKEISSATVALRSMQGFPFYDKPMRIQYSK 446
+M+GQAF+ S+A AL + G+ YD+P+ +Q+++
Sbjct: 99 RMKGQAFIGLACESTAKQALEATNGYMLYDRPIVVQFAR 137
>UniRef50_Q8ILQ0 Cluster: Spliceosome-associated protein, putative;
n=6; Plasmodium|Rep: Spliceosome-associated protein,
putative - Plasmodium falciparum (isolate 3D7)
Length = 484
Score = 34.3 bits (75), Expect = 1.8
Identities = 20/65 (30%), Positives = 34/65 (52%), Gaps = 3/65 (4%)
Frame = +3
Query: 270 LYAIFSQFGQILDIVAMKTL--KMRGQAFVIFKEISSATVALRSMQGFPFYDKPMRIQYS 443
L+ IFS FGQI+ + M+ +G F+ + S+ +A+ +M +K + I Y+
Sbjct: 123 LFDIFSSFGQIMTVKVMRNEDDTSKGHGFISYDNFESSDLAIENMNNQFICNKKVHISYA 182
Query: 444 -KIDS 455
K DS
Sbjct: 183 FKKDS 187
>UniRef50_Q57WD0 Cluster: RNA-binding protein, putative; n=1;
Trypanosoma brucei|Rep: RNA-binding protein, putative -
Trypanosoma brucei
Length = 593
Score = 34.3 bits (75), Expect = 1.8
Identities = 19/66 (28%), Positives = 32/66 (48%), Gaps = 3/66 (4%)
Frame = +3
Query: 270 LYAIFSQFGQILDIVAMKTL---KMRGQAFVIFKEISSATVALRSMQGFPFYDKPMRIQY 440
L +FS +G+IL M+ + G AFV F A A+ ++ G+ + M +Q+
Sbjct: 146 LVDLFSPYGEILSAAVMRNIHTGDSLGTAFVRFATTEQAQAAMEALTGYVLEGRSMVVQW 205
Query: 441 SKIDSD 458
+K D
Sbjct: 206 AKRQHD 211
>UniRef50_Q4D4H5 Cluster: Putative uncharacterized protein; n=2;
Trypanosoma cruzi|Rep: Putative uncharacterized protein
- Trypanosoma cruzi
Length = 601
Score = 34.3 bits (75), Expect = 1.8
Identities = 21/62 (33%), Positives = 32/62 (51%), Gaps = 3/62 (4%)
Frame = +3
Query: 270 LYAIFSQFGQILDIVAM---KTLKMRGQAFVIFKEISSATVALRSMQGFPFYDKPMRIQY 440
LY F +G+I M T K RG AFV FKE+++A A M F+ + + ++
Sbjct: 253 LYKHFHPYGEIESAKVMLDIHTGKSRGIAFVKFKEVANAEKAAEEMNNSVFHGETIAVRV 312
Query: 441 SK 446
+K
Sbjct: 313 AK 314
>UniRef50_Q6FSA7 Cluster: Candida glabrata strain CBS138 chromosome
H complete sequence; n=1; Candida glabrata|Rep: Candida
glabrata strain CBS138 chromosome H complete sequence -
Candida glabrata (Yeast) (Torulopsis glabrata)
Length = 555
Score = 34.3 bits (75), Expect = 1.8
Identities = 20/59 (33%), Positives = 31/59 (52%)
Frame = +3
Query: 270 LYAIFSQFGQILDIVAMKTLKMRGQAFVIFKEISSATVALRSMQGFPFYDKPMRIQYSK 446
L + F FG I+ + K +G FV + E SSA A+ MQGFP + +R+ + +
Sbjct: 343 LRSYFEPFGTIIYV---KIPAGKGCGFVQYVERSSAETAITKMQGFPIANSRVRLSWGR 398
>UniRef50_Q6CUE4 Cluster: Kluyveromyces lactis strain NRRL Y-1140
chromosome C of strain NRRL Y- 1140 of Kluyveromyces
lactis; n=1; Kluyveromyces lactis|Rep: Kluyveromyces
lactis strain NRRL Y-1140 chromosome C of strain NRRL Y-
1140 of Kluyveromyces lactis - Kluyveromyces lactis
(Yeast) (Candida sphaerica)
Length = 540
Score = 34.3 bits (75), Expect = 1.8
Identities = 18/63 (28%), Positives = 32/63 (50%)
Frame = +3
Query: 270 LYAIFSQFGQILDIVAMKTLKMRGQAFVIFKEISSATVALRSMQGFPFYDKPMRIQYSKI 449
L+ +F FG I D+ K + FV + E A A+ +QGF P+R+ + ++
Sbjct: 461 LFELFKPFGTITDV---KIPPGKQCGFVKYNERLEAEAAINGLQGFIIMGSPIRLSWGRL 517
Query: 450 DSD 458
+S+
Sbjct: 518 NSN 520
>UniRef50_A1C5Y9 Cluster: Pre-mRNA branch site protein p14,
putative; n=10; Pezizomycotina|Rep: Pre-mRNA branch site
protein p14, putative - Aspergillus clavatus
Length = 113
Score = 34.3 bits (75), Expect = 1.8
Identities = 16/57 (28%), Positives = 30/57 (52%)
Frame = +3
Query: 270 LYAIFSQFGQILDIVAMKTLKMRGQAFVIFKEISSATVALRSMQGFPFYDKPMRIQY 440
L+ +F +FG I I +G AFV+++++ A A + GF F ++ + + Y
Sbjct: 27 LFDLFGKFGPIRQIRQGIANNSKGTAFVVYEDVHDAKQACDKLNGFNFQNRYLVVLY 83
>UniRef50_UPI00015B552E Cluster: PREDICTED: similar to bruno; n=1;
Nasonia vitripennis|Rep: PREDICTED: similar to bruno -
Nasonia vitripennis
Length = 544
Score = 33.9 bits (74), Expect = 2.4
Identities = 20/62 (32%), Positives = 32/62 (51%), Gaps = 3/62 (4%)
Frame = +3
Query: 270 LYAIFSQFGQILD---IVAMKTLKMRGQAFVIFKEISSATVALRSMQGFPFYDKPMRIQY 440
L A+F FG +L + +T K + FV + + SSA A++ M GF K +++Q
Sbjct: 476 LIAMFMPFGNVLSAKVFIDKETKKSKCFGFVSYDKPSSAQKAIQMMHGFQIGTKRLKVQL 535
Query: 441 SK 446
K
Sbjct: 536 KK 537
>UniRef50_UPI0000E45C64 Cluster: PREDICTED: similar to RNA-binding
region (RNP1, RRM) containing 3; n=1; Strongylocentrotus
purpuratus|Rep: PREDICTED: similar to RNA-binding region
(RNP1, RRM) containing 3 - Strongylocentrotus purpuratus
Length = 518
Score = 33.9 bits (74), Expect = 2.4
Identities = 17/49 (34%), Positives = 28/49 (57%)
Frame = +3
Query: 300 ILDIVAMKTLKMRGQAFVIFKEISSATVALRSMQGFPFYDKPMRIQYSK 446
+ +I MK +M+GQAFV +A ALR G +DKP+ + +++
Sbjct: 443 MFNIQLMKQGRMKGQAFVGLPSELAAQRALRDTNGLLVHDKPIVVSFAR 491
>UniRef50_UPI00006CB38A Cluster: polypyrimidine tract binding protein,
putative; n=1; Tetrahymena thermophila SB210|Rep:
polypyrimidine tract binding protein, putative -
Tetrahymena thermophila SB210
Length = 1213
Score = 33.9 bits (74), Expect = 2.4
Identities = 20/62 (32%), Positives = 32/62 (51%)
Frame = +3
Query: 270 LYAIFSQFGQILDIVAMKTLKMRGQAFVIFKEISSATVALRSMQGFPFYDKPMRIQYSKI 449
LY IFS FG I+ I+ + + AF+ + +AT A M F+D +R+ YS
Sbjct: 977 LYNIFSNFGDIVKIILKRN---KCTAFIEYTMQENATKAKEFMDKKIFFDNEIRVFYSHF 1033
Query: 450 DS 455
++
Sbjct: 1034 ET 1035
>UniRef50_Q4RXM3 Cluster: Chromosome 11 SCAF14979, whole genome
shotgun sequence; n=2; Clupeocephala|Rep: Chromosome 11
SCAF14979, whole genome shotgun sequence - Tetraodon
nigroviridis (Green puffer)
Length = 3147
Score = 33.9 bits (74), Expect = 2.4
Identities = 18/59 (30%), Positives = 31/59 (52%)
Frame = +3
Query: 270 LYAIFSQFGQILDIVAMKTLKMRGQAFVIFKEISSATVALRSMQGFPFYDKPMRIQYSK 446
L IF +FG+I+DI K + AFV + +I+S A++ M G +++ + K
Sbjct: 450 LLDIFQRFGEIVDIDIKKVNGVPQYAFVQYSDIASVCKAIKKMDGEYLGSNRLKLGFGK 508
>UniRef50_A7QYR4 Cluster: Chromosome chr5 scaffold_253, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr5 scaffold_253, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 888
Score = 33.9 bits (74), Expect = 2.4
Identities = 18/59 (30%), Positives = 32/59 (54%)
Frame = +3
Query: 270 LYAIFSQFGQILDIVAMKTLKMRGQAFVIFKEISSATVALRSMQGFPFYDKPMRIQYSK 446
L A+FS+FG + ++ + R AFV F+ A A ++QG PM+I++++
Sbjct: 33 LLAVFSRFGALDCFISYSS---RSFAFVYFRRGEDARAAREALQGMVVLGTPMKIEFAR 88
>UniRef50_A2XN97 Cluster: Putative uncharacterized protein; n=3;
Oryza sativa|Rep: Putative uncharacterized protein -
Oryza sativa subsp. indica (Rice)
Length = 199
Score = 33.9 bits (74), Expect = 2.4
Identities = 17/57 (29%), Positives = 30/57 (52%)
Frame = +3
Query: 270 LYAIFSQFGQILDIVAMKTLKMRGQAFVIFKEISSATVALRSMQGFPFYDKPMRIQY 440
+Y IF ++G I I RG AFV++++I A A+ + GF ++ + + Y
Sbjct: 35 MYDIFGKYGAIRQIRLGNAKDTRGTAFVVYEDIYDAKNAVDHLSGFNVANRYLIVLY 91
>UniRef50_Q8ILZ7 Cluster: Putative uncharacterized protein; n=1;
Plasmodium falciparum 3D7|Rep: Putative uncharacterized
protein - Plasmodium falciparum (isolate 3D7)
Length = 514
Score = 33.9 bits (74), Expect = 2.4
Identities = 21/62 (33%), Positives = 34/62 (54%), Gaps = 3/62 (4%)
Frame = +3
Query: 270 LYAIFSQFGQILDI-VAMK--TLKMRGQAFVIFKEISSATVALRSMQGFPFYDKPMRIQY 440
L + FS FG I+ +A + T + RG AFV + + SA A++ M GF + K +++
Sbjct: 421 LLSAFSPFGNIISAHIATERDTGRNRGFAFVSYDNVDSAINAVKYMNGFLAHKKKLKVTI 480
Query: 441 SK 446
K
Sbjct: 481 KK 482
>UniRef50_Q54NB8 Cluster: RNA-binding region-containing protein;
n=1; Dictyostelium discoideum AX4|Rep: RNA-binding
region-containing protein - Dictyostelium discoideum AX4
Length = 1035
Score = 33.9 bits (74), Expect = 2.4
Identities = 19/56 (33%), Positives = 32/56 (57%), Gaps = 3/56 (5%)
Frame = +3
Query: 276 AIFSQFGQILDIVAMK---TLKMRGQAFVIFKEISSATVALRSMQGFPFYDKPMRI 434
+IFSQFG+++ M+ T K +G FV F+ SA A+ +M GF + +++
Sbjct: 787 SIFSQFGRVISCFLMQNADTGKHKGFGFVDFELKKSADDAIATMNGFELLGRSIKV 842
>UniRef50_Q4QI27 Cluster: RNA-binding protein 5-like protein; n=3;
Leishmania|Rep: RNA-binding protein 5-like protein -
Leishmania major
Length = 245
Score = 33.9 bits (74), Expect = 2.4
Identities = 19/71 (26%), Positives = 37/71 (52%), Gaps = 3/71 (4%)
Frame = +3
Query: 270 LYAIFSQFGQILDIVAMKTLKM---RGQAFVIFKEISSATVALRSMQGFPFYDKPMRIQY 440
L +FS +G+I+ M+ K +G FV+F+E+SSA A+ + G ++++
Sbjct: 36 LQDLFSPYGRIVSARIMRAKKSHASKGYGFVMFREVSSAEKAIEGLHGRVVDGSRIQVRR 95
Query: 441 SKIDSDIIAXK 473
+ D+ + K
Sbjct: 96 ANADASMTFSK 106
>UniRef50_Q16MW3 Cluster: RNA recognition motif protein split ends;
n=1; Aedes aegypti|Rep: RNA recognition motif protein
split ends - Aedes aegypti (Yellowfever mosquito)
Length = 663
Score = 33.9 bits (74), Expect = 2.4
Identities = 20/56 (35%), Positives = 33/56 (58%), Gaps = 2/56 (3%)
Frame = +3
Query: 282 FSQFGQILDIVAMKTLKMRGQAFVIFKEISSATVALRSMQGFPF--YDKPMRIQYS 443
F +FG I I + K QAF+++ I +AT A++ M+GFP D+ +RI ++
Sbjct: 307 FDRFGAIKKI---EYNKGDTQAFILYDSIDAATAAVKEMRGFPLGAPDRRIRIDFA 359
>UniRef50_A7AMD5 Cluster: Splicing factor, CC1-like family protein;
n=1; Babesia bovis|Rep: Splicing factor, CC1-like family
protein - Babesia bovis
Length = 488
Score = 33.9 bits (74), Expect = 2.4
Identities = 17/58 (29%), Positives = 31/58 (53%), Gaps = 3/58 (5%)
Frame = +3
Query: 279 IFSQFGQILDIVAMKTLKMR---GQAFVIFKEISSATVALRSMQGFPFYDKPMRIQYS 443
+FS FG I+ + ++ GQA++ FK S A A+ +M GF + +++ Y+
Sbjct: 267 MFSPFGNIISVEILRDPHSNLPLGQAYIKFKRTSEAKEAVTAMNGFDIGGQTIKVAYA 324
>UniRef50_A3FQ28 Cluster: Putative uncharacterized protein; n=1;
Cryptosporidium parvum Iowa II|Rep: Putative
uncharacterized protein - Cryptosporidium parvum Iowa II
Length = 86
Score = 33.9 bits (74), Expect = 2.4
Identities = 18/46 (39%), Positives = 24/46 (52%)
Frame = +3
Query: 270 LYAIFSQFGQILDIVAMKTLKMRGQAFVIFKEISSATVALRSMQGF 407
LY IF + G I I +G AFV++ EI A AL+ + GF
Sbjct: 32 LYDIFGRHGTIRQIRRGVGEDTKGTAFVVYDEIEDAKSALKQLSGF 77
>UniRef50_Q9Y7A8 Cluster: Pad-1; n=18; Pezizomycotina|Rep: Pad-1 -
Neurospora crassa
Length = 575
Score = 33.9 bits (74), Expect = 2.4
Identities = 18/57 (31%), Positives = 28/57 (49%), Gaps = 2/57 (3%)
Frame = +3
Query: 270 LYAIFSQFGQILDIVAMK--TLKMRGQAFVIFKEISSATVALRSMQGFPFYDKPMRI 434
L +F FG++ + K + RG FV F++ A AL M GF +P+R+
Sbjct: 297 LQNVFEPFGELEFVQLQKDDNGRSRGYGFVQFRDAGQAREALEKMNGFDLAGRPIRV 353
>UniRef50_Q6C747 Cluster: Yarrowia lipolytica chromosome E of strain
CLIB 122 of Yarrowia lipolytica; n=1; Yarrowia
lipolytica|Rep: Yarrowia lipolytica chromosome E of
strain CLIB 122 of Yarrowia lipolytica - Yarrowia
lipolytica (Candida lipolytica)
Length = 294
Score = 33.9 bits (74), Expect = 2.4
Identities = 22/62 (35%), Positives = 32/62 (51%), Gaps = 3/62 (4%)
Frame = +3
Query: 270 LYAIFSQFGQILDIVAMK---TLKMRGQAFVIFKEISSATVALRSMQGFPFYDKPMRIQY 440
L +F ++G I + K T + RG AFV + S A AL +M G F + M++ Y
Sbjct: 230 LRRMFGKYGMINRVYVAKDRDTGRPRGFAFVTYTLKSHAQAALEAMDGHGFDNLIMKVDY 289
Query: 441 SK 446
SK
Sbjct: 290 SK 291
>UniRef50_A2QQZ9 Cluster: Similarity to oligouridylate binding
protein ubp1; n=18; Pezizomycotina|Rep: Similarity to
oligouridylate binding protein ubp1 - Aspergillus niger
Length = 497
Score = 33.9 bits (74), Expect = 2.4
Identities = 21/48 (43%), Positives = 25/48 (52%), Gaps = 3/48 (6%)
Frame = +3
Query: 270 LYAIFSQFGQILDIVAM---KTLKMRGQAFVIFKEISSATVALRSMQG 404
L FS FG + + M KT + RG FV F+E S A AL SM G
Sbjct: 200 LLQAFSAFGSVSEARVMWDMKTGRSRGYGFVAFRERSDADKALSSMDG 247
>UniRef50_A7AWK7 Cluster: RNA recognition motif. (A.k.a. RRM, RBD,
or RNP) domain containing protein; n=1; Babesia
bovis|Rep: RNA recognition motif. (A.k.a. RRM, RBD, or
RNP) domain containing protein - Babesia bovis
Length = 420
Score = 33.5 bits (73), Expect = 3.2
Identities = 21/64 (32%), Positives = 33/64 (51%), Gaps = 3/64 (4%)
Frame = +3
Query: 282 FSQFGQILDI-VAM--KTLKMRGQAFVIFKEISSATVALRSMQGFPFYDKPMRIQYSKID 452
FSQFG+IL +A T + +G AFV + SA A++ + GF K +++ K D
Sbjct: 307 FSQFGKILSSRIASDRSTGRHKGYAFVSYDTPESAAQAIQHLNGFTVLGKRLKVTIKKGD 366
Query: 453 SDII 464
+
Sbjct: 367 ESTV 370
>UniRef50_A0CCX3 Cluster: Chromosome undetermined scaffold_169,
whole genome shotgun sequence; n=2; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_169,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 158
Score = 33.5 bits (73), Expect = 3.2
Identities = 19/58 (32%), Positives = 31/58 (53%)
Frame = +3
Query: 270 LYAIFSQFGQILDIVAMKTLKMRGQAFVIFKEISSATVALRSMQGFPFYDKPMRIQYS 443
L +F Q+GQI +I + AFV F+++ A A S+QG + M+I+Y+
Sbjct: 22 LEELFKQYGQITEIKVLDK-GPHVYAFVEFEKVEKAIEAYNSLQGRELKGQAMKIEYA 78
>UniRef50_Q6NV05 Cluster: Zgc:85696; n=7; Clupeocephala|Rep:
Zgc:85696 - Danio rerio (Zebrafish) (Brachydanio rerio)
Length = 556
Score = 33.1 bits (72), Expect = 4.3
Identities = 17/60 (28%), Positives = 32/60 (53%)
Frame = +3
Query: 270 LYAIFSQFGQILDIVAMKTLKMRGQAFVIFKEISSATVALRSMQGFPFYDKPMRIQYSKI 449
L +F FG++L+ K++G AFV + A A+ ++ G F +P+ ++ SK+
Sbjct: 99 LQELFQTFGKVLECD-----KVKGYAFVHMENKEDALQAIEALHGTSFKGRPLSVELSKV 153
>UniRef50_Q54G90 Cluster: Putative uncharacterized protein; n=1;
Dictyostelium discoideum AX4|Rep: Putative
uncharacterized protein - Dictyostelium discoideum AX4
Length = 459
Score = 33.1 bits (72), Expect = 4.3
Identities = 18/63 (28%), Positives = 37/63 (58%), Gaps = 5/63 (7%)
Frame = +3
Query: 270 LYAIFSQFGQILD---IVAMKTLKMRGQAFVIFKEISSATVALRSMQGFPFYD--KPMRI 434
L +FS +G++++ ++ + T RGQ V + + SA A++S+ GF D KP+ +
Sbjct: 235 LSELFSAYGEVVESKLLIDITTNASRGQGLVRYIDTQSAINAVKSLNGFILQDPEKPLIV 294
Query: 435 QYS 443
+++
Sbjct: 295 RFA 297
>UniRef50_A4V6N1 Cluster: HnRNP A2/B1 protein; n=1; Dugesia
japonica|Rep: HnRNP A2/B1 protein - Dugesia japonica
(Planarian)
Length = 386
Score = 33.1 bits (72), Expect = 4.3
Identities = 16/34 (47%), Positives = 22/34 (64%), Gaps = 3/34 (8%)
Frame = +3
Query: 282 FSQFGQILDIVAMKTL---KMRGQAFVIFKEISS 374
FS++G + D+VAM+ K RG FV+FKE S
Sbjct: 38 FSKYGDVCDVVAMRDKTGNKSRGFGFVVFKEAES 71
>UniRef50_A2E1S1 Cluster: Putative uncharacterized protein; n=1;
Trichomonas vaginalis G3|Rep: Putative uncharacterized
protein - Trichomonas vaginalis G3
Length = 100
Score = 33.1 bits (72), Expect = 4.3
Identities = 16/61 (26%), Positives = 31/61 (50%)
Frame = +3
Query: 270 LYAIFSQFGQILDIVAMKTLKMRGQAFVIFKEISSATVALRSMQGFPFYDKPMRIQYSKI 449
LY +FS++G I I AFV+F + A A ++ G+ ++ + +QY ++
Sbjct: 30 LYELFSRYGSIYQIRLGCIPSTSTTAFVVFDNVLDAQAAKDALNGYTIENRYLIVQYYRL 89
Query: 450 D 452
+
Sbjct: 90 N 90
>UniRef50_A0BZZ4 Cluster: Chromosome undetermined scaffold_14, whole
genome shotgun sequence; n=4; Eukaryota|Rep: Chromosome
undetermined scaffold_14, whole genome shotgun sequence
- Paramecium tetraurelia
Length = 260
Score = 33.1 bits (72), Expect = 4.3
Identities = 21/62 (33%), Positives = 31/62 (50%), Gaps = 3/62 (4%)
Frame = +3
Query: 267 SLYAIFSQFGQILDIVAMK---TLKMRGQAFVIFKEISSATVALRSMQGFPFYDKPMRIQ 437
+LY FS FG IL M+ T +G FV + S+ AL +M G K +R++
Sbjct: 121 TLYETFSAFGHILSTKIMRNPETGVSKGYGFVSYDNFESSDGALTAMNGQFLGTKIIRVE 180
Query: 438 YS 443
Y+
Sbjct: 181 YA 182
>UniRef50_Q6BMT1 Cluster: Similar to CA5935|IPF2798 Candida albicans
IPF2798; n=3; Saccharomycetales|Rep: Similar to
CA5935|IPF2798 Candida albicans IPF2798 - Debaryomyces
hansenii (Yeast) (Torulaspora hansenii)
Length = 387
Score = 33.1 bits (72), Expect = 4.3
Identities = 16/50 (32%), Positives = 28/50 (56%)
Frame = +3
Query: 324 TLKMRGQAFVIFKEISSATVALRSMQGFPFYDKPMRIQYSKIDSDIIAXK 473
T K +G AF+ F++ S T AL+S ++P+R++Y + S + K
Sbjct: 259 TGKCKGFAFIDFRDESGPTTALKSKLAKSLINRPLRLEYGEDRSKLTPKK 308
>UniRef50_Q9Y580 Cluster: RNA-binding protein 7; n=27;
Tetrapoda|Rep: RNA-binding protein 7 - Homo sapiens
(Human)
Length = 266
Score = 33.1 bits (72), Expect = 4.3
Identities = 18/59 (30%), Positives = 30/59 (50%), Gaps = 2/59 (3%)
Frame = +3
Query: 270 LYAIFSQFGQILDIVAMKTL--KMRGQAFVIFKEISSATVALRSMQGFPFYDKPMRIQY 440
L+ +F Q G ++ + K K + AFV FK S A+ + G Y +P++IQ+
Sbjct: 26 LFELFHQAGPVIKVKIPKDKDGKPKQFAFVNFKHEVSVPYAMNLLNGIKLYGRPIKIQF 84
>UniRef50_Q5U3Q9 Cluster: Zgc:101754; n=4; Clupeocephala|Rep:
Zgc:101754 - Danio rerio (Zebrafish) (Brachydanio rerio)
Length = 439
Score = 32.7 bits (71), Expect = 5.6
Identities = 16/63 (25%), Positives = 33/63 (52%)
Frame = +3
Query: 267 SLYAIFSQFGQILDIVAMKTLKMRGQAFVIFKEISSATVALRSMQGFPFYDKPMRIQYSK 446
SL++ F + + + T +++GQAF+ + A AL + G+ +KP+ I++ +
Sbjct: 352 SLFSRFQKDESQPILYRLLTGRLKGQAFITLADAKIAQAALDLLNGYKLLEKPLVIEFGR 411
Query: 447 IDS 455
S
Sbjct: 412 ARS 414
>UniRef50_Q69VQ4 Cluster: RNA recognition motif (RRM)-containing
protein-like; n=3; Oryza sativa|Rep: RNA recognition
motif (RRM)-containing protein-like - Oryza sativa
subsp. japonica (Rice)
Length = 1005
Score = 32.7 bits (71), Expect = 5.6
Identities = 16/39 (41%), Positives = 21/39 (53%)
Frame = +3
Query: 336 RGQAFVIFKEISSATVALRSMQGFPFYDKPMRIQYSKID 452
R AFV F A A+R +QG P+RI++SK D
Sbjct: 84 RSFAFVTFAREEDAVAAVRELQGIHLRGAPIRIEFSKGD 122
Score = 32.7 bits (71), Expect = 5.6
Identities = 21/63 (33%), Positives = 35/63 (55%)
Frame = +3
Query: 267 SLYAIFSQFGQILDIVAMKTLKMRGQAFVIFKEISSATVALRSMQGFPFYDKPMRIQYSK 446
+L+ FS FG+++ I T R AFV + I++A A ++QG F + + I +S+
Sbjct: 186 TLWEAFSPFGEVVKIT---TFPGRTYAFVQYTTIAAACRAKETLQGNIFNNPRVSICFSR 242
Query: 447 IDS 455
DS
Sbjct: 243 SDS 245
>UniRef50_Q019A8 Cluster: Molecular chaperone; n=2;
Ostreococcus|Rep: Molecular chaperone - Ostreococcus
tauri
Length = 477
Score = 32.7 bits (71), Expect = 5.6
Identities = 15/46 (32%), Positives = 25/46 (54%)
Frame = +3
Query: 267 SLYAIFSQFGQILDIVAMKTLKMRGQAFVIFKEISSATVALRSMQG 404
+L IF FG + D+V + K +G A V+F+ + + A R+ G
Sbjct: 372 ALRGIFEAFGIVEDVVVREGKKKKGSALVVFENVEACERAARASCG 417
>UniRef50_Q7R8I3 Cluster: Drosophila melanogaster RE19804p-related;
n=2; Aconoidasida|Rep: Drosophila melanogaster
RE19804p-related - Plasmodium yoelii yoelii
Length = 123
Score = 32.7 bits (71), Expect = 5.6
Identities = 18/57 (31%), Positives = 29/57 (50%)
Frame = +3
Query: 270 LYAIFSQFGQILDIVAMKTLKMRGQAFVIFKEISSATVALRSMQGFPFYDKPMRIQY 440
LY IF ++G + I + RG +FV++ +I A AL + GF + + I Y
Sbjct: 42 LYDIFGKYGTVRQIRKGNSEGTRGTSFVVYDDIYDAKNALDHLSGFNVAGRYLVILY 98
>UniRef50_Q5CYN8 Cluster: Nop15p/nopp34; nucleolar protein with 1
RRM domain; n=2; Cryptosporidium|Rep: Nop15p/nopp34;
nucleolar protein with 1 RRM domain - Cryptosporidium
parvum Iowa II
Length = 156
Score = 32.7 bits (71), Expect = 5.6
Identities = 17/53 (32%), Positives = 30/53 (56%), Gaps = 3/53 (5%)
Frame = +3
Query: 282 FSQFGQILDIVAMKTLK---MRGQAFVIFKEISSATVALRSMQGFPFYDKPMR 431
FSQFG+IL I ++ K RG AF+ F+ + A +A +M + + + ++
Sbjct: 36 FSQFGKILRIKLSRSKKNGHSRGYAFIEFESMEVAQIAASTMNNYIIFKRSLK 88
>UniRef50_Q4N5B6 Cluster: Spliceosome associated protein, putative;
n=2; Theileria|Rep: Spliceosome associated protein,
putative - Theileria parva
Length = 290
Score = 32.7 bits (71), Expect = 5.6
Identities = 17/59 (28%), Positives = 32/59 (54%), Gaps = 1/59 (1%)
Frame = +3
Query: 270 LYAIFSQFGQILDIVAMKT-LKMRGQAFVIFKEISSATVALRSMQGFPFYDKPMRIQYS 443
L+ FS FG++L +++ + A V F + ++ ALR+M G +KP+ + Y+
Sbjct: 121 LHDTFSAFGRVLSAKMVRSETSGKTYAIVSFDDFEASDAALRTMNGQFLCNKPIHVSYA 179
>UniRef50_Q20084 Cluster: Putative uncharacterized protein exc-7;
n=2; Caenorhabditis|Rep: Putative uncharacterized
protein exc-7 - Caenorhabditis elegans
Length = 456
Score = 32.7 bits (71), Expect = 5.6
Identities = 17/59 (28%), Positives = 33/59 (55%), Gaps = 2/59 (3%)
Frame = +3
Query: 270 LYAIFSQFGQILDIVAMK--TLKMRGQAFVIFKEISSATVALRSMQGFPFYDKPMRIQY 440
L+ +FSQFG I+++ ++ T + +G AFV + A A+ S+ G K +++ +
Sbjct: 390 LWQLFSQFGAIVNVKILRDLTQQCKGYAFVSMSNYTEAYNAMLSLNGTNLAGKTLQVVF 448
>UniRef50_Q6FMN2 Cluster: Candida glabrata strain CBS138 chromosome
K complete sequence; n=1; Candida glabrata|Rep: Candida
glabrata strain CBS138 chromosome K complete sequence -
Candida glabrata (Yeast) (Torulopsis glabrata)
Length = 802
Score = 32.7 bits (71), Expect = 5.6
Identities = 19/59 (32%), Positives = 29/59 (49%)
Frame = +3
Query: 270 LYAIFSQFGQILDIVAMKTLKMRGQAFVIFKEISSATVALRSMQGFPFYDKPMRIQYSK 446
L IF FG IL I K + FV F+ A A++ +QGF + P+R+ + +
Sbjct: 483 LRKIFQPFGNILSI---KIPPGKNCGFVKFEHKIDAEAAIQGLQGFVLVENPIRLSWGR 538
>UniRef50_Q6CJZ1 Cluster: Kluyveromyces lactis strain NRRL Y-1140
chromosome F of strain NRRL Y- 1140 of Kluyveromyces
lactis; n=1; Kluyveromyces lactis|Rep: Kluyveromyces
lactis strain NRRL Y-1140 chromosome F of strain NRRL Y-
1140 of Kluyveromyces lactis - Kluyveromyces lactis
(Yeast) (Candida sphaerica)
Length = 589
Score = 32.7 bits (71), Expect = 5.6
Identities = 20/59 (33%), Positives = 31/59 (52%)
Frame = +3
Query: 270 LYAIFSQFGQILDIVAMKTLKMRGQAFVIFKEISSATVALRSMQGFPFYDKPMRIQYSK 446
L + F FGQI V +K +G FV + + SA A+ MQGFP + +R+ + +
Sbjct: 332 LRSYFQPFGQI---VYVKIPVGKGCGFVQYVDRISAETAISKMQGFPIGNSRIRLSWGR 387
>UniRef50_Q4PI99 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 640
Score = 32.7 bits (71), Expect = 5.6
Identities = 19/55 (34%), Positives = 30/55 (54%), Gaps = 3/55 (5%)
Frame = +3
Query: 279 IFSQFGQI--LDIVAM-KTLKMRGQAFVIFKEISSATVALRSMQGFPFYDKPMRI 434
+F FG+I +D+ +T K +G F+ FK+ A AL M GF D+ +R+
Sbjct: 421 VFEPFGEIEYVDLHREPETGKSKGFCFIQFKKAEDAKKALEQMNGFVLADRAIRV 475
>UniRef50_A7EK71 Cluster: Putative uncharacterized protein; n=1;
Sclerotinia sclerotiorum 1980|Rep: Putative
uncharacterized protein - Sclerotinia sclerotiorum 1980
Length = 443
Score = 32.7 bits (71), Expect = 5.6
Identities = 18/39 (46%), Positives = 22/39 (56%)
Frame = +3
Query: 30 ARDAPVSTKTA*TCKKNLEVSNLIPPSLTLVQSNSFLVT 146
A DAPVST T ++ L +SN SLT +Q LVT
Sbjct: 220 ASDAPVSTLTYTALQQQLNISNSSHVSLTAIQKADILVT 258
>UniRef50_Q96IZ5 Cluster: RNA-binding protein 41; n=29; Amniota|Rep:
RNA-binding protein 41 - Homo sapiens (Human)
Length = 413
Score = 32.7 bits (71), Expect = 5.6
Identities = 16/43 (37%), Positives = 24/43 (55%)
Frame = +3
Query: 318 MKTLKMRGQAFVIFKEISSATVALRSMQGFPFYDKPMRIQYSK 446
M T +MRGQAF+ F A AL + G+ + K + I++ K
Sbjct: 344 MMTGRMRGQAFITFPNKEIAWQALHLVNGYKLHGKILVIEFGK 386
>UniRef50_Q4RJP2 Cluster: Chromosome 13 SCAF15035, whole genome
shotgun sequence; n=2; Euteleostomi|Rep: Chromosome 13
SCAF15035, whole genome shotgun sequence - Tetraodon
nigroviridis (Green puffer)
Length = 720
Score = 32.3 bits (70), Expect = 7.4
Identities = 21/45 (46%), Positives = 28/45 (62%), Gaps = 2/45 (4%)
Frame = +3
Query: 270 LYAIFSQFGQILDI-VAMKTL-KMRGQAFVIFKEISSATVALRSM 398
L + S+FG IL+ + +K KMRG AFV FK +SSA AL +
Sbjct: 122 LKQVCSKFGPILEAKIPLKPDGKMRGFAFVQFKNMSSAAKALNGL 166
>UniRef50_Q986X2 Cluster: ABC transporter, permease protein; n=2;
Alphaproteobacteria|Rep: ABC transporter, permease
protein - Rhizobium loti (Mesorhizobium loti)
Length = 302
Score = 32.3 bits (70), Expect = 7.4
Identities = 15/42 (35%), Positives = 24/42 (57%)
Frame = +3
Query: 300 ILDIVAMKTLKMRGQAFVIFKEISSATVALRSMQGFPFYDKP 425
+LD V L+ +GQA ++ A++ALRS+ F F +P
Sbjct: 91 LLDRVLFSRLRSQGQAIIVVMASFGASMALRSLLEFTFSSRP 132
>UniRef50_A7HWJ5 Cluster: Activator of Hsp90 ATPase 1 family
protein; n=1; Parvibaculum lavamentivorans DS-1|Rep:
Activator of Hsp90 ATPase 1 family protein -
Parvibaculum lavamentivorans DS-1
Length = 180
Score = 32.3 bits (70), Expect = 7.4
Identities = 12/26 (46%), Positives = 16/26 (61%)
Frame = +1
Query: 46 FQRKLPRPVKRIWKYPI*FRLHSHWF 123
F+R LP P++R+WKY L WF
Sbjct: 15 FERLLPGPIERVWKYLTDAELRGLWF 40
>UniRef50_Q9M9E6 Cluster: F3F9.20; n=8; Arabidopsis thaliana|Rep:
F3F9.20 - Arabidopsis thaliana (Mouse-ear cress)
Length = 302
Score = 32.3 bits (70), Expect = 7.4
Identities = 18/39 (46%), Positives = 24/39 (61%), Gaps = 3/39 (7%)
Frame = +3
Query: 282 FSQFGQILDIVAM---KTLKMRGQAFVIFKEISSATVAL 389
F QFG+IL+ V + T K +G FV F+E SAT A+
Sbjct: 37 FEQFGEILEAVIITDKNTGKSKGYGFVTFRESDSATRAV 75
>UniRef50_Q10N87 Cluster: Polyadenylate binding protein, types 1, 2,
3, 4 family protein, expressed; n=4; Magnoliophyta|Rep:
Polyadenylate binding protein, types 1, 2, 3, 4 family
protein, expressed - Oryza sativa subsp. japonica (Rice)
Length = 647
Score = 32.3 bits (70), Expect = 7.4
Identities = 17/53 (32%), Positives = 27/53 (50%), Gaps = 2/53 (3%)
Frame = +3
Query: 282 FSQFGQILDIVAMKTLK--MRGQAFVIFKEISSATVALRSMQGFPFYDKPMRI 434
F++FG I M+ K +G FV + A A+ +M+G FY KP+ +
Sbjct: 339 FNEFGNITSAKIMRDEKGISKGFGFVCYNTPEEAKCAVSNMRGVMFYGKPLYV 391
>UniRef50_Q23YD9 Cluster: RNA binding protein; n=2; Alveolata|Rep:
RNA binding protein - Tetrahymena thermophila SB210
Length = 137
Score = 32.3 bits (70), Expect = 7.4
Identities = 15/46 (32%), Positives = 25/46 (54%)
Frame = +3
Query: 270 LYAIFSQFGQILDIVAMKTLKMRGQAFVIFKEISSATVALRSMQGF 407
LY +F +G I I + +G AFV++++I A A+ + GF
Sbjct: 49 LYDVFGTYGPIRQIRKGVSGDKKGTAFVVYEDIFDAKTAVEHLNGF 94
>UniRef50_A7RXI1 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 424
Score = 32.3 bits (70), Expect = 7.4
Identities = 20/55 (36%), Positives = 28/55 (50%), Gaps = 3/55 (5%)
Frame = +3
Query: 282 FSQFGQILDIVAMK---TLKMRGQAFVIFKEISSATVALRSMQGFPFYDKPMRIQ 437
F Q+G I D+ +K T + RG +V F + SSA +A M G D P I+
Sbjct: 37 FEQYGTIEDVWVVKDKATKENRGVCYVKFVKASSAALACEEMDGRQIGDDPKPIK 91
>UniRef50_Q6BYW3 Cluster: Debaryomyces hansenii chromosome A of
strain CBS767 of Debaryomyces hansenii; n=1;
Debaryomyces hansenii|Rep: Debaryomyces hansenii
chromosome A of strain CBS767 of Debaryomyces hansenii -
Debaryomyces hansenii (Yeast) (Torulaspora hansenii)
Length = 841
Score = 32.3 bits (70), Expect = 7.4
Identities = 19/59 (32%), Positives = 30/59 (50%)
Frame = +3
Query: 270 LYAIFSQFGQILDIVAMKTLKMRGQAFVIFKEISSATVALRSMQGFPFYDKPMRIQYSK 446
L+ IFSQ+G I+ I A+K G F F+ S ++ P ++K MR+ S+
Sbjct: 372 LFRIFSQYGDIIQI-AIKA----GYGFTQFRTAESCLDCIKGESNVPLHNKVMRLDASR 425
>UniRef50_Q6BUC2 Cluster: Similar to Tr|Q06106 Saccharomyces
cerevisiae YPR112c MRD1; n=3; Saccharomycetales|Rep:
Similar to Tr|Q06106 Saccharomyces cerevisiae YPR112c
MRD1 - Debaryomyces hansenii (Yeast) (Torulaspora
hansenii)
Length = 109
Score = 32.3 bits (70), Expect = 7.4
Identities = 16/62 (25%), Positives = 30/62 (48%)
Frame = +3
Query: 267 SLYAIFSQFGQILDIVAMKTLKMRGQAFVIFKEISSATVALRSMQGFPFYDKPMRIQYSK 446
SLY + FG I I + +G F+++ +S+A A +S+ G F + + +
Sbjct: 23 SLYELAGNFGNIHQIRIPVDEQNKGTCFIVYNNLSNAIRASKSLNGINFQGRYLVSMHYS 82
Query: 447 ID 452
+D
Sbjct: 83 VD 84
>UniRef50_Q6BMQ4 Cluster: Similar to sp|P38741 Saccharomyces
cerevisiae YHL024w RIM4 No sporulation singleton; n=1;
Debaryomyces hansenii|Rep: Similar to sp|P38741
Saccharomyces cerevisiae YHL024w RIM4 No sporulation
singleton - Debaryomyces hansenii (Yeast) (Torulaspora
hansenii)
Length = 631
Score = 32.3 bits (70), Expect = 7.4
Identities = 19/61 (31%), Positives = 31/61 (50%)
Frame = +3
Query: 282 FSQFGQILDIVAMKTLKMRGQAFVIFKEISSATVALRSMQGFPFYDKPMRIQYSKIDSDI 461
F + G+I ++ +K FV +KE SSA A+ F DK M +QY ++ S+
Sbjct: 358 FKRHGKIEEVTIIKKTS-NTFGFVKYKEESSAASAVERENHSMFKDKTMHVQYRELHSNT 416
Query: 462 I 464
+
Sbjct: 417 L 417
>UniRef50_A3LZJ7 Cluster: Predicted protein; n=2; Pichia|Rep:
Predicted protein - Pichia stipitis (Yeast)
Length = 387
Score = 32.3 bits (70), Expect = 7.4
Identities = 14/41 (34%), Positives = 25/41 (60%)
Frame = +3
Query: 324 TLKMRGQAFVIFKEISSATVALRSMQGFPFYDKPMRIQYSK 446
T K +G AF+ FK+ + T AL+S ++P+R++Y +
Sbjct: 264 TGKCKGFAFIDFKDETGPTAALKSKLAKKLINRPLRLEYGE 304
>UniRef50_UPI00005A408C Cluster: PREDICTED: similar to RNA binding
motif protein 7; n=1; Canis lupus familiaris|Rep:
PREDICTED: similar to RNA binding motif protein 7 -
Canis familiaris
Length = 251
Score = 31.9 bits (69), Expect = 9.8
Identities = 18/57 (31%), Positives = 30/57 (52%)
Frame = +3
Query: 270 LYAIFSQFGQILDIVAMKTLKMRGQAFVIFKEISSATVALRSMQGFPFYDKPMRIQY 440
L+ +F Q G I+ V + K + AFV FK S A+ + G + +P++IQ+
Sbjct: 78 LFELFHQAGPIVK-VKIPNGKPKQFAFVNFKHKVSVPYAMNLLNGIKLFGRPIKIQF 133
>UniRef50_Q4T2S2 Cluster: Chromosome undetermined SCAF10201, whole
genome shotgun sequence; n=1; Tetraodon
nigroviridis|Rep: Chromosome undetermined SCAF10201,
whole genome shotgun sequence - Tetraodon nigroviridis
(Green puffer)
Length = 375
Score = 31.9 bits (69), Expect = 9.8
Identities = 17/60 (28%), Positives = 35/60 (58%), Gaps = 3/60 (5%)
Frame = +3
Query: 270 LYAIFSQFGQILD---IVAMKTLKMRGQAFVIFKEISSATVALRSMQGFPFYDKPMRIQY 440
L A+FS+F Q + + T +M+GQAF+ ++ +A AL+ + G+ +P+ +++
Sbjct: 314 LVALFSRFQQENRPPVLYRLLTGRMKGQAFITLPDVETAQRALQLVHGYRGLGRPLVLEF 373
>UniRef50_A1SSM5 Cluster: RNP-1 like RNA-binding protein precursor;
n=6; Proteobacteria|Rep: RNP-1 like RNA-binding protein
precursor - Psychromonas ingrahamii (strain 37)
Length = 160
Score = 31.9 bits (69), Expect = 9.8
Identities = 18/60 (30%), Positives = 34/60 (56%), Gaps = 3/60 (5%)
Frame = +3
Query: 267 SLYAIFSQFGQILDIVAMK---TLKMRGQAFVIFKEISSATVALRSMQGFPFYDKPMRIQ 437
++ ++FS+ GQ+L + MK T K RG FV E A A+ ++ F F ++ ++++
Sbjct: 83 AIRSLFSEHGQVLSVRLMKDKHTGKRRGFGFVEMPE-KDANNAINALNEFEFQERSLKVR 141
>UniRef50_Q945S0 Cluster: U2 auxiliary factor small subunit; n=3;
Eukaryota|Rep: U2 auxiliary factor small subunit -
Arabidopsis thaliana (Mouse-ear cress)
Length = 283
Score = 31.9 bits (69), Expect = 9.8
Identities = 16/62 (25%), Positives = 34/62 (54%), Gaps = 2/62 (3%)
Frame = +3
Query: 270 LYAIFSQFGQI--LDIVAMKTLKMRGQAFVIFKEISSATVALRSMQGFPFYDKPMRIQYS 443
++ ++FG++ L++ M G +V+FKE A AL+++QG + +P+ +S
Sbjct: 85 IFEELNKFGEVESLNVCVNLADHMIGNVYVLFKEEDHAAAALQALQGRFYSGRPIIADFS 144
Query: 444 KI 449
+
Sbjct: 145 PV 146
>UniRef50_A4S763 Cluster: Predicted protein; n=1; Ostreococcus
lucimarinus CCE9901|Rep: Predicted protein -
Ostreococcus lucimarinus CCE9901
Length = 288
Score = 31.9 bits (69), Expect = 9.8
Identities = 17/64 (26%), Positives = 32/64 (50%), Gaps = 3/64 (4%)
Frame = +3
Query: 270 LYAIFSQFGQILDIVAM---KTLKMRGQAFVIFKEISSATVALRSMQGFPFYDKPMRIQY 440
L +F Q G +++ VA+ T + +G V+F+ A A++ G +PM+I+
Sbjct: 225 LRQVFQQVGNVVNAVAVCHTDTGRSKGWGTVLFETREQAQAAIQGFNGVELEHRPMQIKL 284
Query: 441 SKID 452
+ D
Sbjct: 285 DRYD 288
>UniRef50_Q7R479 Cluster: GLP_480_99804_101795; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_480_99804_101795 - Giardia lamblia
ATCC 50803
Length = 663
Score = 31.9 bits (69), Expect = 9.8
Identities = 21/68 (30%), Positives = 36/68 (52%), Gaps = 2/68 (2%)
Frame = +3
Query: 270 LYAIFSQFGQILDIVAMKTL--KMRGQAFVIFKEISSATVALRSMQGFPFYDKPMRIQYS 443
L + SQFG+++ A K L ++RG AFV + A VAL ++ FY + + +++
Sbjct: 582 LKQLVSQFGRVVSFRAPKKLDGRLRGFAFVQYATEKEAEVALNRIKLTHFYGRHLVPEFT 641
Query: 444 KIDSDIIA 467
D + A
Sbjct: 642 TEDQGLDA 649
>UniRef50_Q4DSQ8 Cluster: RNA-binding protein, putative; n=2;
Trypanosoma cruzi|Rep: RNA-binding protein, putative -
Trypanosoma cruzi
Length = 340
Score = 31.9 bits (69), Expect = 9.8
Identities = 16/60 (26%), Positives = 31/60 (51%), Gaps = 4/60 (6%)
Frame = +3
Query: 267 SLYAIFSQFGQILDIVAMKTLKM----RGQAFVIFKEISSATVALRSMQGFPFYDKPMRI 434
SL +F +FG ++ ++ K +G FV++ + S A+ M GF ++K +R+
Sbjct: 23 SLREMFEKFGTLVSARVIRDKKRDGHPKGYGFVVYADRESGLRAMEEMNGFKIHNKHLRV 82
>UniRef50_Q382W9 Cluster: RNA-binding protein, putative; n=1;
Trypanosoma brucei|Rep: RNA-binding protein, putative -
Trypanosoma brucei
Length = 217
Score = 31.9 bits (69), Expect = 9.8
Identities = 17/49 (34%), Positives = 29/49 (59%), Gaps = 3/49 (6%)
Frame = +3
Query: 270 LYAIFSQFGQILDIVAMKTL---KMRGQAFVIFKEISSATVALRSMQGF 407
L+ +FS +G+I M++ + RG FV+F+ SSA A+ S+ G+
Sbjct: 32 LFDLFSPYGRISSARIMRSKGARQSRGYGFVLFRHASSAEKAIDSLVGY 80
>UniRef50_A3FQM3 Cluster: RNA binding protein, putative; n=2;
Cryptosporidium|Rep: RNA binding protein, putative -
Cryptosporidium parvum Iowa II
Length = 906
Score = 31.9 bits (69), Expect = 9.8
Identities = 21/50 (42%), Positives = 27/50 (54%), Gaps = 3/50 (6%)
Frame = +3
Query: 267 SLYAIFSQFGQILDIVAM--KTL-KMRGQAFVIFKEISSATVALRSMQGF 407
SL +F +FG IL M KT + +G AFV + I SA A+ M GF
Sbjct: 750 SLVGLFCRFGNILSAHLMVDKTSGRNKGVAFVSYDNIHSAAEAVNHMNGF 799
>UniRef50_A2EGG1 Cluster: Putative uncharacterized protein; n=1;
Trichomonas vaginalis G3|Rep: Putative uncharacterized
protein - Trichomonas vaginalis G3
Length = 225
Score = 31.9 bits (69), Expect = 9.8
Identities = 17/47 (36%), Positives = 24/47 (51%), Gaps = 2/47 (4%)
Frame = +3
Query: 270 LYAIFSQFGQILDIVAMKTL--KMRGQAFVIFKEISSATVALRSMQG 404
+YA F QFG + DIV L + G +V F E A +++QG
Sbjct: 98 VYAEFKQFGNVQDIVIASNLTEHLYGNVYVRFNEPDEALACHKALQG 144
>UniRef50_A2D9U4 Cluster: Putative uncharacterized protein; n=1;
Trichomonas vaginalis G3|Rep: Putative uncharacterized
protein - Trichomonas vaginalis G3
Length = 1076
Score = 31.9 bits (69), Expect = 9.8
Identities = 13/32 (40%), Positives = 21/32 (65%)
Frame = +2
Query: 107 FTHIGSIEFVPCHASRIKNKT*FCNQNDNGYK 202
FTH + VPC+ S++++KT F + N NG +
Sbjct: 967 FTHRINFSLVPCYVSKLEDKTEFDSVNMNGIR 998
>UniRef50_Q750E5 Cluster: AGR010Cp; n=2; Saccharomycetaceae|Rep:
AGR010Cp - Ashbya gossypii (Yeast) (Eremothecium
gossypii)
Length = 266
Score = 31.9 bits (69), Expect = 9.8
Identities = 11/41 (26%), Positives = 29/41 (70%)
Frame = +3
Query: 321 KTLKMRGQAFVIFKEISSATVALRSMQGFPFYDKPMRIQYS 443
+T K +G AF+ FK++++++ A+R++ G+ ++ ++ Y+
Sbjct: 47 QTGKSKGYAFIEFKDLATSSSAVRNLNGYALGNRTLKCGYT 87
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 489,832,857
Number of Sequences: 1657284
Number of extensions: 9026341
Number of successful extensions: 18113
Number of sequences better than 10.0: 172
Number of HSP's better than 10.0 without gapping: 17657
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18092
length of database: 575,637,011
effective HSP length: 96
effective length of database: 416,537,747
effective search space used: 34989170748
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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