Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmov10i19
(543 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
05_01_0398 + 3142934-3143110,3143697-3143930,3144180-3144353,314... 104 5e-23
03_02_0694 - 10448712-10448996,10449030-10449074,10449588-104496... 96 2e-20
03_02_0865 - 11895257-11895340,11896004-11896069,11896297-118963... 43 2e-04
04_04_0435 - 25170348-25170593,25170989-25171189,25171580-251717... 40 0.001
03_06_0418 + 33785482-33785870,33786098-33786173,33786985-337870... 34 0.084
03_06_0523 + 34499533-34499705,34499808-34499917,34500037-345002... 33 0.15
09_02_0322 - 7240125-7241568,7242043-7243253,7245782-7246144,724... 33 0.19
09_06_0188 - 21441377-21442201 32 0.26
05_07_0125 + 27861368-27862282 32 0.34
08_02_0783 - 21166491-21166892,21167139-21167251,21168127-211682... 31 0.59
06_03_0614 - 22753092-22753349,22754059-22754277,22754712-227549... 31 0.59
09_04_0736 - 19815427-19815642,19815782-19816903,19817006-198177... 30 1.4
04_04_1627 - 34867557-34870095,34870159-34870391,34871274-34871276 30 1.4
04_04_0979 - 29862280-29862444,29862718-29862999,29863831-298639... 30 1.4
04_01_0107 - 1107976-1108033,1108411-1108638,1110109-1110422,111... 29 2.4
01_06_0188 - 27310814-27311138,27311197-27311547,27311682-273116... 29 3.2
04_03_0876 + 20493213-20493339,20493574-20493642,20493745-20493890 28 4.2
01_04_0103 + 16046012-16046018,16046214-16046366,16046908-160471... 28 4.2
08_01_0001 - 14186-14288,14473-14590,14671-14727,14943-15010,151... 27 7.3
04_04_1294 - 32424762-32426309 27 9.7
>05_01_0398 + 3142934-3143110,3143697-3143930,3144180-3144353,
3144450-3144554,3145274-3145351,3146019-3146100,
3146519-3146681,3147100-3147435,3147511-3147641,
3147687-3147729,3147826-3148444,3148523-3148588,
3149103-3149265,3149557-3149635,3150232-3150431,
3150972-3151144,3151466-3151559,3152353-3152444,
3153146-3153436
Length = 1099
Score = 104 bits (249), Expect = 5e-23
Identities = 50/88 (56%), Positives = 65/88 (73%)
Frame = +3
Query: 204 PNHTIYXXXXXXXXXXXXXXXSLYAIFSQFGQILDIVAMKTLKMRGQAFVIFKEISSATV 383
PN TIY SL A+FSQFG+ILD++A KTLK +GQA+V+F++++SAT
Sbjct: 867 PNVTIYINNLNEKIKLEELKKSLRAVFSQFGKILDVLAFKTLKHKGQAWVVFEDVASATE 926
Query: 384 ALRSMQGFPFYDKPMRIQYSKIDSDIIA 467
AL+SMQ FPF++KPMRIQY+K SDIIA
Sbjct: 927 ALKSMQDFPFHNKPMRIQYAKTKSDIIA 954
Score = 27.5 bits (58), Expect = 7.3
Identities = 15/37 (40%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
Frame = +3
Query: 339 GQAFVIFKEISSATVALRSMQGFPF-YDKPMRIQYSK 446
G AFV + + AT A+ +QGF D M I Y+K
Sbjct: 1062 GIAFVEYGDEGQATAAMNHLQGFKITKDNQMLISYAK 1098
>03_02_0694 -
10448712-10448996,10449030-10449074,10449588-10449647,
10449817-10449890,10451056-10451149,10451851-10452023,
10452526-10452598
Length = 267
Score = 95.9 bits (228), Expect = 2e-20
Identities = 46/91 (50%), Positives = 61/91 (67%)
Frame = +3
Query: 195 DIRPNHTIYXXXXXXXXXXXXXXXSLYAIFSQFGQILDIVAMKTLKMRGQAFVIFKEISS 374
DI PN T+Y SLYA+ SQ+G+ILD+VA+KT K+RGQA+V+F EI++
Sbjct: 5 DIPPNQTVYLRNLNEKVKKEELKRSLYALCSQYGRILDVVALKTPKLRGQAWVVFSEITA 64
Query: 375 ATVALRSMQGFPFYDKPMRIQYSKIDSDIIA 467
AT A R +Q F FY K MR+QY+K SD +A
Sbjct: 65 ATNAFRGLQEFDFYGKRMRVQYAKTRSDCLA 95
Score = 30.3 bits (65), Expect = 1.0
Identities = 15/37 (40%), Positives = 24/37 (64%), Gaps = 1/37 (2%)
Frame = +3
Query: 339 GQAFVIFKEISSATVALRSMQGFPFYD-KPMRIQYSK 446
G AFV +++ S + VA++++QGF PM I Y+K
Sbjct: 230 GIAFVEYEDDSQSMVAMQALQGFKITPYNPMAISYAK 266
>03_02_0865 -
11895257-11895340,11896004-11896069,11896297-11896355,
11896470-11896557,11897158-11897328,11897406-11897564,
11897653-11897835,11897931-11898012,11898753-11898959,
11899099-11899170,11901948-11902055,11902460-11902506
Length = 441
Score = 42.7 bits (96), Expect = 2e-04
Identities = 22/48 (45%), Positives = 28/48 (58%)
Frame = +3
Query: 303 LDIVAMKTLKMRGQAFVIFKEISSATVALRSMQGFPFYDKPMRIQYSK 446
L I M+ +MRGQAFV F + A AL + GF F KPM IQ+ +
Sbjct: 386 LSIKLMQEGRMRGQAFVTFPSVELAQRALNLVHGFVFKGKPMIIQFGR 433
>04_04_0435 -
25170348-25170593,25170989-25171189,25171580-25171756,
25172284-25172418,25173131-25173262,25173292-25173369,
25173452-25174108,25174210-25174328,25175897-25176173
Length = 673
Score = 39.9 bits (89), Expect = 0.001
Identities = 22/64 (34%), Positives = 32/64 (50%), Gaps = 3/64 (4%)
Frame = +3
Query: 270 LYAIFSQFGQILDIVAMKTLKMR---GQAFVIFKEISSATVALRSMQGFPFYDKPMRIQY 440
LY +FSQ GQ++ + + + R G A+V F A AL + P KP+R+ Y
Sbjct: 55 LYELFSQAGQVMSVRVCRDISSRRSLGYAYVNFNNPVDAARALELLNFAPLNGKPIRVMY 114
Query: 441 SKID 452
S D
Sbjct: 115 SNRD 118
>03_06_0418 +
33785482-33785870,33786098-33786173,33786985-33787071,
33788096-33788143
Length = 199
Score = 33.9 bits (74), Expect = 0.084
Identities = 17/57 (29%), Positives = 30/57 (52%)
Frame = +3
Query: 270 LYAIFSQFGQILDIVAMKTLKMRGQAFVIFKEISSATVALRSMQGFPFYDKPMRIQY 440
+Y IF ++G I I RG AFV++++I A A+ + GF ++ + + Y
Sbjct: 35 MYDIFGKYGAIRQIRLGNAKDTRGTAFVVYEDIYDAKNAVDHLSGFNVANRYLIVLY 91
>03_06_0523 +
34499533-34499705,34499808-34499917,34500037-34500224,
34500984-34501451
Length = 312
Score = 33.1 bits (72), Expect = 0.15
Identities = 15/60 (25%), Positives = 37/60 (61%), Gaps = 3/60 (5%)
Frame = +3
Query: 270 LYAIFSQFGQILDIVAMK---TLKMRGQAFVIFKEISSATVALRSMQGFPFYDKPMRIQY 440
L A+F+Q+G+++D+ ++ T K +G AF+ +++ S +A+ ++ G + +R+ +
Sbjct: 52 LLAVFAQYGEVVDVNLVRDKGTGKSKGFAFLAYEDQRSTILAVDNLNGAKVLGRIVRVDH 111
>09_02_0322 -
7240125-7241568,7242043-7243253,7245782-7246144,
7246502-7246522
Length = 1012
Score = 32.7 bits (71), Expect = 0.19
Identities = 16/39 (41%), Positives = 21/39 (53%)
Frame = +3
Query: 336 RGQAFVIFKEISSATVALRSMQGFPFYDKPMRIQYSKID 452
R AFV F A A+R +QG P+RI++SK D
Sbjct: 91 RSFAFVTFAREEDAVAAVRELQGIHLRGAPIRIEFSKGD 129
Score = 32.7 bits (71), Expect = 0.19
Identities = 21/63 (33%), Positives = 35/63 (55%)
Frame = +3
Query: 267 SLYAIFSQFGQILDIVAMKTLKMRGQAFVIFKEISSATVALRSMQGFPFYDKPMRIQYSK 446
+L+ FS FG+++ I T R AFV + I++A A ++QG F + + I +S+
Sbjct: 193 TLWEAFSPFGEVVKIT---TFPGRTYAFVQYTTIAAACRAKETLQGNIFNNPRVSICFSR 249
Query: 447 IDS 455
DS
Sbjct: 250 SDS 252
>09_06_0188 - 21441377-21442201
Length = 274
Score = 32.3 bits (70), Expect = 0.26
Identities = 16/48 (33%), Positives = 26/48 (54%), Gaps = 3/48 (6%)
Frame = +3
Query: 270 LYAIFSQFGQILDIVAMK---TLKMRGQAFVIFKEISSATVALRSMQG 404
L+ +FS+FG++ + +K + + RG AFV+F A A M G
Sbjct: 86 LHTLFSRFGRVARVTVLKDRDSRRSRGVAFVLFVRREDAAAAAAEMHG 133
>05_07_0125 + 27861368-27862282
Length = 304
Score = 31.9 bits (69), Expect = 0.34
Identities = 17/62 (27%), Positives = 32/62 (51%), Gaps = 2/62 (3%)
Frame = +3
Query: 270 LYAIFSQFGQILDIVAMKTLK--MRGQAFVIFKEISSATVALRSMQGFPFYDKPMRIQYS 443
+Y S+FG++ + L M G +V F+E A A ++QG + +P+ ++YS
Sbjct: 85 IYEELSKFGEVETLNVCDNLADHMIGNVYVQFREEEQAVAAHNALQGRFYSGRPIIVEYS 144
Query: 444 KI 449
+
Sbjct: 145 PV 146
>08_02_0783 -
21166491-21166892,21167139-21167251,21168127-21168208,
21168298-21168416,21168471-21168528,21168954-21169016,
21169641-21169850,21171549-21171731
Length = 409
Score = 31.1 bits (67), Expect = 0.59
Identities = 17/50 (34%), Positives = 29/50 (58%)
Frame = +3
Query: 270 LYAIFSQFGQILDIVAMKTLKMRGQAFVIFKEISSATVALRSMQGFPFYD 419
L+ +FS FG + I AM QA + + +I++A VA ++++G YD
Sbjct: 209 LHTVFSAFGTVQKI-AMFEKNGGMQALIQYPDITTAAVAKQALEGHCIYD 257
>06_03_0614 -
22753092-22753349,22754059-22754277,22754712-22754960,
22755186-22755275,22755379-22755456,22755562-22756337,
22757042-22757384
Length = 670
Score = 31.1 bits (67), Expect = 0.59
Identities = 18/48 (37%), Positives = 25/48 (52%), Gaps = 2/48 (4%)
Frame = +3
Query: 267 SLYAIFSQFGQILD--IVAMKTLKMRGQAFVIFKEISSATVALRSMQG 404
SLY +FS FG IL + K +G F+ F+ SSA A+ + G
Sbjct: 164 SLYEMFSSFGTILSSKVATDFNGKSKGYGFIQFESESSAKDAINGLNG 211
>09_04_0736 -
19815427-19815642,19815782-19816903,19817006-19817707,
19817808-19817855,19817959-19818201,19819035-19819391
Length = 895
Score = 29.9 bits (64), Expect = 1.4
Identities = 19/57 (33%), Positives = 30/57 (52%)
Frame = +3
Query: 276 AIFSQFGQILDIVAMKTLKMRGQAFVIFKEISSATVALRSMQGFPFYDKPMRIQYSK 446
A FS G LD V M R AFV+F+ + A AL ++QG +R+++++
Sbjct: 64 ASFSPHGA-LDCV-MARAGPRSYAFVLFRSVPEARAALDALQGSKVKGSVVRLEFAR 118
>04_04_1627 - 34867557-34870095,34870159-34870391,34871274-34871276
Length = 924
Score = 29.9 bits (64), Expect = 1.4
Identities = 18/66 (27%), Positives = 30/66 (45%)
Frame = +3
Query: 270 LYAIFSQFGQILDIVAMKTLKMRGQAFVIFKEISSATVALRSMQGFPFYDKPMRIQYSKI 449
L+ Q Q +V T +G FV F + SA VAL M G+P + ++ + +
Sbjct: 719 LFLPCGQITQAKVVVERYTGVSKGFGFVKFADAYSAAVALTHMNGYPLDGHVLEVRIAGV 778
Query: 450 DSDIIA 467
D ++
Sbjct: 779 HPDAMS 784
>04_04_0979 -
29862280-29862444,29862718-29862999,29863831-29863929,
29864037-29864366
Length = 291
Score = 29.9 bits (64), Expect = 1.4
Identities = 15/58 (25%), Positives = 28/58 (48%), Gaps = 2/58 (3%)
Frame = +3
Query: 279 IFSQFGQILDIVAMKTL--KMRGQAFVIFKEISSATVALRSMQGFPFYDKPMRIQYSK 446
+F+Q G + D+ +K K +G AFV A A+ + + +R+++SK
Sbjct: 99 LFAQCGAVKDVEVIKGKDGKKKGFAFVTMATAEEAAAAVEKLNSLDVMGRTIRVEFSK 156
>04_01_0107 -
1107976-1108033,1108411-1108638,1110109-1110422,
1110568-1110680,1111740-1111845
Length = 272
Score = 29.1 bits (62), Expect = 2.4
Identities = 16/45 (35%), Positives = 28/45 (62%)
Frame = +3
Query: 279 IFSQFGQILDIVAMKTLKMRGQAFVIFKEISSATVALRSMQGFPF 413
+F ++G+I D + MK+ G AFV F++ A+R++ G+PF
Sbjct: 21 LFYRYGRI-DRIDMKS----GFAFVYFEDERDGDEAIRALDGYPF 60
>01_06_0188 -
27310814-27311138,27311197-27311547,27311682-27311693,
27313598-27313662,27314945-27314968
Length = 258
Score = 28.7 bits (61), Expect = 3.2
Identities = 16/62 (25%), Positives = 32/62 (51%), Gaps = 2/62 (3%)
Frame = +3
Query: 270 LYAIFSQFGQILDIVAMKTLK--MRGQAFVIFKEISSATVALRSMQGFPFYDKPMRIQYS 443
++ S+FG+I ++ L M G +V F+E A A ++QG + +P+ + +S
Sbjct: 80 IFEELSKFGEIENLNVCDNLADHMIGNVYVQFREEDQAAAAHTALQGRFYSGRPIIVDFS 139
Query: 444 KI 449
+
Sbjct: 140 PV 141
>04_03_0876 + 20493213-20493339,20493574-20493642,20493745-20493890
Length = 113
Score = 28.3 bits (60), Expect = 4.2
Identities = 20/49 (40%), Positives = 26/49 (53%), Gaps = 3/49 (6%)
Frame = +3
Query: 267 SLYAIFSQFGQILD--IVAMK-TLKMRGQAFVIFKEISSATVALRSMQG 404
SL FSQ+GQ+L+ IV K T + +G FV F +A A M G
Sbjct: 52 SLAEAFSQYGQVLEATIVTDKMTNRPKGFGFVKFASEEAANKAKEEMNG 100
>01_04_0103 +
16046012-16046018,16046214-16046366,16046908-16047158,
16047509-16047631,16047818-16047931,16048153-16048315,
16048867-16049462
Length = 468
Score = 28.3 bits (60), Expect = 4.2
Identities = 11/18 (61%), Positives = 12/18 (66%)
Frame = -2
Query: 224 DINGMVGSYIHCHFDYKT 171
D NG V S +HCH D KT
Sbjct: 208 DGNGSVASEVHCHHDAKT 225
>08_01_0001 -
14186-14288,14473-14590,14671-14727,14943-15010,
15104-15144,15405-15461,15980-16041,16833-16929,
17016-17102,17171-17263,17394-17452,17653-17716
Length = 301
Score = 27.5 bits (58), Expect = 7.3
Identities = 15/33 (45%), Positives = 20/33 (60%)
Frame = +3
Query: 312 VAMKTLKMRGQAFVIFKEISSATVALRSMQGFP 410
+A K L MR + VIF + +A VA S+Q FP
Sbjct: 111 IAGKELMMRHRRRVIFSVVVTAIVAGVSLQNFP 143
>04_04_1294 - 32424762-32426309
Length = 515
Score = 27.1 bits (57), Expect = 9.7
Identities = 17/47 (36%), Positives = 27/47 (57%), Gaps = 3/47 (6%)
Frame = +3
Query: 270 LYAIFSQFGQILD---IVAMKTLKMRGQAFVIFKEISSATVALRSMQ 401
L + FS+FG++ D I ++ + +G FV+F+ SA ALR Q
Sbjct: 130 LRSAFSRFGELEDCRVISDKQSGRSKGYGFVLFRSRRSALRALRRPQ 176
Score = 27.1 bits (57), Expect = 9.7
Identities = 18/43 (41%), Positives = 25/43 (58%), Gaps = 3/43 (6%)
Frame = +3
Query: 270 LYAIFSQFGQILD--IVAMKTL-KMRGQAFVIFKEISSATVAL 389
LY FSQFG+I + + KT K +G A ++K + SA AL
Sbjct: 246 LYEYFSQFGEIEEGPLGFDKTTGKPKGFALFVYKSVESARRAL 288
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,522,469
Number of Sequences: 37544
Number of extensions: 224711
Number of successful extensions: 403
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 395
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 403
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1210221432
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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