Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmov10i11
(638 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_06_0267 - 32751431-32751489,32751600-32751645,32751886-327519... 214 6e-56
12_01_0489 + 3872495-3872538,3872663-3872741,3872835-3872914,387... 93 2e-19
02_05_0449 - 29107310-29107377,29107732-29107777,29107860-291079... 91 7e-19
02_05_0922 - 32742863-32742958,32743081-32743136,32743253-327433... 88 5e-18
04_04_0840 + 28570642-28570809,28570919-28571025,28571137-285712... 81 1e-15
10_08_1019 - 22299800-22299946,22300040-22300109,22300930-223010... 46 2e-05
03_02_0326 + 7474352-7474448,7474913-7474977,7475105-7475191,747... 33 0.19
03_04_0206 - 18493178-18495310 30 1.3
10_08_0573 + 18872720-18872781,18873261-18873610,18873917-188743... 30 1.8
10_08_0327 + 16797366-16800639,16800979-16801067,16801120-16801593 30 1.8
02_05_0444 - 29073740-29073844,29074417-29074725,29077910-290779... 30 1.8
07_03_1328 + 25838952-25839155,25839412-25839959,25840167-25840482 29 4.1
10_06_0081 - 10449655-10450140,10450249-10450430,10450703-10450709 28 5.4
06_01_0102 + 834660-834911,835460-835568,835891-836006,836116-83... 28 5.4
04_04_0552 + 26195452-26195614,26195682-26195725,26198390-26199541 28 5.4
04_03_0521 + 16765347-16767324,16769202-16769392 28 5.4
03_05_1151 - 30763140-30763240,30764074-30764618,30764651-30764817 28 5.4
02_03_0314 - 17600970-17600974,17601230-17601357,17601832-176019... 28 5.4
01_01_0832 - 6500139-6500333,6500610-6500875,6501494-6501815,650... 28 5.4
>03_06_0267 -
32751431-32751489,32751600-32751645,32751886-32751960,
32752045-32752114,32752288-32752386,32752505-32752641,
32753040-32753221,32753314-32753482,32753824-32753856,
32753958-32754068,32754184-32754295,32755592-32755727,
32756264-32756291
Length = 418
Score = 214 bits (522), Expect = 6e-56
Identities = 97/190 (51%), Positives = 139/190 (73%), Gaps = 3/190 (1%)
Frame = +3
Query: 75 LWVDKHRPKDLMKLDYHKEQAVRLKNLVQQSDFPHLLIYGPSGAGKKTRVMCLLRELYGS 254
LWVDK+RPK L K+ H + A LK LV + D PHLL YGPSG+GKKT VM L+++++G+
Sbjct: 66 LWVDKYRPKTLDKVTVHDQVAQNLKKLVAEQDCPHLLFYGPSGSGKKTLVMALIKQMFGA 125
Query: 255 GVERLRQETMNF---TTPSNKKIEIMTVSSNYHIEVNPTDVGIHDRVVIMDLVKNVAQTH 425
G ++++ E + T N +IE+ +SS +H+E+NP+D G DR V+ +++K +A+
Sbjct: 126 GADKVKMENKTWKIDTGSRNIEIELAMLSSAHHVEMNPSDAGFQDRYVVQEVIKEMAKNR 185
Query: 426 QIDSNGQREFKVVILNEVDDLTKDAQHALRRTMEKYVATCRLILIANSISRVIPAIRSRC 605
ID+ G+R FKV++LNEVD L+++AQH+LRRTMEKY A+CRLIL NS S+V A+RSRC
Sbjct: 186 PIDAKGKRAFKVLVLNEVDKLSREAQHSLRRTMEKYSASCRLILCCNSSSKVTEAVRSRC 245
Query: 606 LTISVPAPTE 635
L + V AP+E
Sbjct: 246 LNVRVNAPSE 255
>12_01_0489 +
3872495-3872538,3872663-3872741,3872835-3872914,
3873888-3874007,3874090-3874159,3874238-3874311,
3874393-3874513,3874600-3874662,3874748-3874807,
3875156-3875281,3875358-3875441,3875912-3876010
Length = 339
Score = 93.1 bits (221), Expect = 2e-19
Identities = 57/177 (32%), Positives = 87/177 (49%), Gaps = 1/177 (0%)
Frame = +3
Query: 78 WVDKHRPKDLMKLDYHKEQAVR-LKNLVQQSDFPHLLIYGPSGAGKKTRVMCLLRELYGS 254
WV+K+RP+ + + H+E+ VR L +Q +D PH+L YGP G GK T + + +LYG
Sbjct: 11 WVEKYRPRQVKDVA-HQEEVVRVLTTTLQTADLPHMLFYGPPGTGKTTTALAIAYQLYGP 69
Query: 255 GVERLRQETMNFTTPSNKKIEIMTVSSNYHIEVNPTDVGIHDRVVIMDLVKNVAQTHQID 434
E + + ++ I ++ R I D + +
Sbjct: 70 --ELYKSRVLELNASDDRGINVV-------------------RTKIKDFAAVAVGSARKG 108
Query: 435 SNGQREFKVVILNEVDDLTKDAQHALRRTMEKYVATCRLILIANSISRVIPAIRSRC 605
+K++IL+E D +T+DAQ+ALRRTME Y R I N ISR+I + SRC
Sbjct: 109 GYPCPPYKIIILDEADSMTEDAQNALRRTMETYSKVTRFFFICNYISRIIEPLASRC 165
>02_05_0449 - 29107310-29107377,29107732-29107777,29107860-29107934,
29108053-29108122,29108313-29108408,29108728-29108914,
29109001-29109169,29109614-29109646,29109731-29109841,
29110070-29111256,29112380-29112448,29114417-29114975,
29115455-29115589,29115714-29115896
Length = 995
Score = 91.1 bits (216), Expect = 7e-19
Identities = 46/187 (24%), Positives = 97/187 (51%), Gaps = 3/187 (1%)
Frame = +3
Query: 78 WVDKHRPKDLMKLDYHKEQAVRLKNLVQQSDFPHLLIYGPSGAGKKTRVMCLLRELYGSG 257
W DK+RP+ L H+EQ +LK LV PH++ GP G+GK + ++ E++G
Sbjct: 686 WADKYRPRTLGGFTCHREQIEQLKQLVSTEFCPHIIFKGPPGSGKSSLCRAVVTEIFGDS 745
Query: 258 VERLRQETMNFTTPSNKKIEIMT--VSSNYHIEVNPTDVGIHDRVVIMDLVKNVAQTHQ- 428
+ + + + + ++ SS++H+E+N + V+MDL + +
Sbjct: 746 SLNVSHYLKSCSGQGSTSMPVLVPLSSSDHHMELNLRYYSKNAGYVLMDLANEITNKKKT 805
Query: 429 IDSNGQREFKVVILNEVDDLTKDAQHALRRTMEKYVATCRLILIANSISRVIPAIRSRCL 608
D + +++FKV++L +VD +++ Q ++ ++ T ++++ S ++ +++SRC
Sbjct: 806 TDPSVRKKFKVIVLYDVDKVSESNQRLIKWMIDSSSDTHKILMTCQDESHILDSMKSRCK 865
Query: 609 TISVPAP 629
I + P
Sbjct: 866 LICIGVP 872
>02_05_0922 -
32742863-32742958,32743081-32743136,32743253-32743382,
32743768-32743849,32744038-32744227,32744290-32744369,
32744769-32744985,32745740-32745923
Length = 344
Score = 88.2 bits (209), Expect = 5e-18
Identities = 56/186 (30%), Positives = 94/186 (50%), Gaps = 10/186 (5%)
Frame = +3
Query: 78 WVDKHRPKDLMKLDYHKEQAVRLKNLVQQSDFPHLLIYGPSGAGKKTRVMCLLRELYGSG 257
WV+K+RP+ L + H++ + L ++ PHLL+YGP G GK + ++ + R+LYGS
Sbjct: 40 WVEKYRPQSLGDVAAHRDIVDTIDRLTNENRLPHLLLYGPPGTGKTSTILAVARKLYGSQ 99
Query: 258 VERLRQETMNFTTPSNKKIEIMTVSSNYHIEVNPTDVGIHDRVVIMDLVKNVAQTHQIDS 437
N +E+N +D D V+ +++ A +
Sbjct: 100 Y------------------------GNMILELNASDERGID--VVRQQIQDFASARSLSF 133
Query: 438 NGQREFKVVILNEVDDLTKDAQHALRR----------TMEKYVATCRLILIANSISRVIP 587
++ K+V+L+E D +TKDAQ ALRR +EK+ + R LI N ++++IP
Sbjct: 134 GAKQSVKMVLLDEADAMTKDAQFALRRATSSNLPHLTVIEKHTRSTRFALICNHVNKIIP 193
Query: 588 AIRSRC 605
A++SRC
Sbjct: 194 ALQSRC 199
>04_04_0840 +
28570642-28570809,28570919-28571025,28571137-28571238,
28571786-28571981,28572691-28572819,28572869-28572895,
28572896-28573090,28573182-28573292
Length = 344
Score = 80.6 bits (190), Expect = 1e-15
Identities = 57/179 (31%), Positives = 90/179 (50%)
Frame = +3
Query: 78 WVDKHRPKDLMKLDYHKEQAVRLKNLVQQSDFPHLLIYGPSGAGKKTRVMCLLRELYGSG 257
WV+K+RP + + + + RL+++ + + P+L++ GP G GK T ++ L EL G
Sbjct: 19 WVEKYRPTRVADVGGNSDAVARLQDIARDGNMPNLILSGPPGTGKTTSILSLAHELLG-- 76
Query: 258 VERLRQETMNFTTPSNKKIEIMTVSSNYHIEVNPTDVGIHDRVVIMDLVKNVAQTHQIDS 437
PS ++ + E+N +D D V+ + +K AQ
Sbjct: 77 -------------PSYREAVL---------ELNASDDRGLD--VVRNKIKMFAQKKVTLQ 112
Query: 438 NGQREFKVVILNEVDDLTKDAQHALRRTMEKYVATCRLILIANSISRVIPAIRSRCLTI 614
G+ K+VIL+E D +T AQ ALRRTME Y T R L N+ S++I I+SRC +
Sbjct: 113 PGRH--KIVILDEADSMTSGAQQALRRTMEIYSNTTRFALACNTSSKIIEPIQSRCAIV 169
>10_08_1019 -
22299800-22299946,22300040-22300109,22300930-22301066,
22301142-22301195,22301638-22301694,22301814-22301846,
22301942-22302067,22302162-22302815,22303042-22303166,
22303770-22303935
Length = 522
Score = 46.4 bits (105), Expect = 2e-05
Identities = 26/99 (26%), Positives = 49/99 (49%), Gaps = 7/99 (7%)
Frame = +3
Query: 75 LWVDKHRPKDLMKLDYHKEQAVRLKNL-----VQQSDFPHLLIYGPSGAGKKTRVMCLLR 239
+W DK+RP L +K+ A+ L N V + H++ GP+ GK++ V L+
Sbjct: 289 IWADKYRPNFLNDFICNKDAALELYNQGFTPQVTAQECNHIIFEGPTSVGKRSMVSALIW 348
Query: 240 ELYGSGVERLRQETMNFTTPSN--KKIEIMTVSSNYHIE 350
+ + + ++ ++T F K I+I S++H+E
Sbjct: 349 DAFATDNLKIEEQTKRFELKGEIAKHIDIRVKISSHHVE 387
>03_02_0326 +
7474352-7474448,7474913-7474977,7475105-7475191,
7475393-7475440,7476086-7476142,7476588-7476687,
7476875-7477185,7477298-7477667,7478745-7478876,
7479362-7479575,7479650-7479710,7480098-7480292
Length = 578
Score = 33.1 bits (72), Expect = 0.19
Identities = 20/65 (30%), Positives = 33/65 (50%), Gaps = 8/65 (12%)
Frame = +3
Query: 75 LWVDKHRPKDLMKLDYHKEQAVRLKN-LVQQSDFPH-------LLIYGPSGAGKKTRVMC 230
LWVDK++P L +L HK++ +K L ++ P L++ G +G GK +
Sbjct: 64 LWVDKYKPHSLAELSVHKKKVEDVKKWLDEKLRAPKGTFGGWTLVLTGQAGVGKSATIKA 123
Query: 231 LLREL 245
+ EL
Sbjct: 124 IAAEL 128
>03_04_0206 - 18493178-18495310
Length = 710
Score = 30.3 bits (65), Expect = 1.3
Identities = 18/66 (27%), Positives = 33/66 (50%), Gaps = 3/66 (4%)
Frame = +3
Query: 186 IYGPSGAGKKTRVMCLLRELYGSGVERLRQETMNFTTPSNKKIEIMTVSSN---YHIEVN 356
I GP+GAGK T + L +L + E R + + S ++++T+ N Y + ++
Sbjct: 515 IVGPNGAGKSTLLNLLAGDLTPTKGEVRRSQKLRIGRYSQHFVDLLTMEENAVQYLLRLH 574
Query: 357 PTDVGI 374
P G+
Sbjct: 575 PDQEGM 580
>10_08_0573 +
18872720-18872781,18873261-18873610,18873917-18874334,
18875172-18877180,18877390-18877398,18880291-18880398,
18880399-18880469,18880769-18881785
Length = 1347
Score = 29.9 bits (64), Expect = 1.8
Identities = 13/37 (35%), Positives = 23/37 (62%)
Frame = -1
Query: 224 NSCFLTGSRGPVNKKVRKVTLLHKIFQTYSLFFVVIQ 114
+ C++ GS G V +KVR +T+L F + ++F + Q
Sbjct: 422 DECYILGSPGEVPEKVRHLTVLLDEFASQNMFETISQ 458
>10_08_0327 + 16797366-16800639,16800979-16801067,16801120-16801593
Length = 1278
Score = 29.9 bits (64), Expect = 1.8
Identities = 28/101 (27%), Positives = 47/101 (46%)
Frame = +3
Query: 300 SNKKIEIMTVSSNYHIEVNPTDVGIHDRVVIMDLVKNVAQTHQIDSNGQREFKVVILNEV 479
+N K++ + S N P + D ++++DL KN + +I S ++ IL +
Sbjct: 691 NNSKLQKVDFSGNMLDGTIPVAISKLDALILLDLSKN-RLSGEIPSELGNLAQLQIL--L 747
Query: 480 DDLTKDAQHALRRTMEKYVATCRLILIANSISRVIPAIRSR 602
D + A+ +EK + RL L N +S IPA SR
Sbjct: 748 DLSSNSLSGAIPPNLEKLITLQRLNLSHNELSGSIPAGFSR 788
>02_05_0444 -
29073740-29073844,29074417-29074725,29077910-29077981,
29078541-29078633,29078825-29078982,29079247-29079415,
29080204-29081241,29081632-29081759,29081926-29081985,
29082033-29083077
Length = 1058
Score = 29.9 bits (64), Expect = 1.8
Identities = 32/113 (28%), Positives = 51/113 (45%)
Frame = +3
Query: 174 PHLLIYGPSGAGKKTRVMCLLRELYGSGVERLRQETMNFTTPSNKKIEIMTVSSNYHIEV 353
P L+I GP G GK LL EL V+ + E + T PSN ++ M V + +
Sbjct: 489 PVLIIQGPPGTGKTV----LLTELIVRAVQ--QGENVLVTAPSNAAVDNM-VERLSNTGL 541
Query: 354 NPTDVGIHDRVVIMDLVKNVAQTHQIDSNGQREFKVVILNEVDDLTKDAQHAL 512
N VG R+ K++A +I + +F+ + + DL KD + +
Sbjct: 542 NIVRVGNPARISPSVASKSLA---EIVNGRLEQFRKELERKRSDLRKDLSYCI 591
>07_03_1328 + 25838952-25839155,25839412-25839959,25840167-25840482
Length = 355
Score = 28.7 bits (61), Expect = 4.1
Identities = 15/28 (53%), Positives = 17/28 (60%)
Frame = +3
Query: 78 WVDKHRPKDLMKLDYHKEQAVRLKNLVQ 161
W+D RPKDLM L Y + R KNL Q
Sbjct: 159 WIDGRRPKDLMPLVYAISKK-RKKNLRQ 185
>10_06_0081 - 10449655-10450140,10450249-10450430,10450703-10450709
Length = 224
Score = 28.3 bits (60), Expect = 5.4
Identities = 11/17 (64%), Positives = 12/17 (70%)
Frame = +3
Query: 72 SLWVDKHRPKDLMKLDY 122
S W+D RPKDLM L Y
Sbjct: 104 SAWIDGQRPKDLMPLVY 120
>06_01_0102 +
834660-834911,835460-835568,835891-836006,836116-836235,
836398-836436,836678-836811,837035-837299,837615-837698,
837943-838003,838748-838810,839174-839216,839632-839711,
839831-840267
Length = 600
Score = 28.3 bits (60), Expect = 5.4
Identities = 14/36 (38%), Positives = 21/36 (58%)
Frame = +3
Query: 144 LKNLVQQSDFPHLLIYGPSGAGKKTRVMCLLRELYG 251
L L + +DF + + GP+G GK T ++ ELYG
Sbjct: 83 LPYLTENNDFMVIGVIGPTGVGKST----IMNELYG 114
>04_04_0552 + 26195452-26195614,26195682-26195725,26198390-26199541
Length = 452
Score = 28.3 bits (60), Expect = 5.4
Identities = 11/17 (64%), Positives = 12/17 (70%)
Frame = +3
Query: 72 SLWVDKHRPKDLMKLDY 122
S W+D RPKDLM L Y
Sbjct: 185 STWIDGRRPKDLMPLVY 201
>04_03_0521 + 16765347-16767324,16769202-16769392
Length = 722
Score = 28.3 bits (60), Expect = 5.4
Identities = 15/39 (38%), Positives = 20/39 (51%)
Frame = +3
Query: 144 LKNLVQQSDFPHLLIYGPSGAGKKTRVMCLLRELYGSGV 260
LKN + DF + LIYG G+ + CL E+ GV
Sbjct: 41 LKNGLGPDDFSYSLIYGFVKDGEVDKAHCLFLEMMEQGV 79
>03_05_1151 - 30763140-30763240,30764074-30764618,30764651-30764817
Length = 270
Score = 28.3 bits (60), Expect = 5.4
Identities = 11/17 (64%), Positives = 12/17 (70%)
Frame = +3
Query: 72 SLWVDKHRPKDLMKLDY 122
S W+D RPKDLM L Y
Sbjct: 122 SAWIDGRRPKDLMPLVY 138
>02_03_0314 -
17600970-17600974,17601230-17601357,17601832-17601924,
17602145-17602257,17602520-17602627,17602724-17602828,
17603185-17603355,17603474-17603652,17603741-17603969,
17604841-17604955,17605137-17605312,17606060-17606143,
17606463-17606630,17607011-17607097,17607201-17607323
Length = 627
Score = 28.3 bits (60), Expect = 5.4
Identities = 12/20 (60%), Positives = 14/20 (70%)
Frame = +3
Query: 174 PHLLIYGPSGAGKKTRVMCL 233
P LI GP+GAGK T + CL
Sbjct: 28 PLTLIVGPNGAGKTTIIECL 47
>01_01_0832 - 6500139-6500333,6500610-6500875,6501494-6501815,
6501915-6502156,6502229-6502457,6503020-6503184,
6503279-6503605,6504150-6504191,6504333-6504400,
6504748-6504934,6506249-6506311,6506748-6506790,
6506919-6507019,6507110-6507184,6507359-6507445,
6507593-6507682,6507906-6507992,6508585-6508783,
6509113-6509177,6509502-6509606,6509726-6509871,
6510100-6510224,6510335-6510437,6510482-6510596,
6510734-6510869,6511298-6511387,6511484-6511578,
6511698-6511763,6511868-6511936,6512034-6512147,
6512241-6512448,6512545-6512600,6512818-6513552
Length = 1671
Score = 28.3 bits (60), Expect = 5.4
Identities = 14/27 (51%), Positives = 19/27 (70%)
Frame = +3
Query: 177 HLLIYGPSGAGKKTRVMCLLRELYGSG 257
HLL+ GPSG+G KT ++ L L+ SG
Sbjct: 1409 HLLVMGPSGSG-KTSLLRALAGLWTSG 1434
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,963,724
Number of Sequences: 37544
Number of extensions: 285405
Number of successful extensions: 868
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 820
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 863
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1573040476
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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