Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmov10i11
         (638 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein.    27   0.38 
AJ439060-10|CAD27761.1| 1197|Anopheles gambiae putative FGF-sign...    26   1.2  
AY193729-1|AAO62002.1|  499|Anopheles gambiae cytochrome P450 CY...    25   2.0  
AJ439353-1|CAD27923.1| 1127|Anopheles gambiae putative Na-K-Cl s...    23   6.2  

>AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein.
          Length = 1376

 Score = 27.5 bits (58), Expect = 0.38
 Identities = 17/69 (24%), Positives = 35/69 (50%)
 Frame = +3

Query: 186 IYGPSGAGKKTRVMCLLRELYGSGVERLRQETMNFTTPSNKKIEIMTVSSNYHIEVNPTD 365
           I GP+G+GK   +  +L  ++G   +++R          +KK+ ++  +S  H   N   
Sbjct: 99  IIGPNGSGKSNVIDSMLF-VFGYRAQKIR----------SKKLSVLMHNSAKHPNTNSCT 147

Query: 366 VGIHDRVVI 392
           VG+H + ++
Sbjct: 148 VGVHFKQIV 156


>AJ439060-10|CAD27761.1| 1197|Anopheles gambiae putative
           FGF-signaling promoter protein.
          Length = 1197

 Score = 25.8 bits (54), Expect = 1.2
 Identities = 16/62 (25%), Positives = 31/62 (50%), Gaps = 2/62 (3%)
 Frame = +3

Query: 81  VDKHRPKDLMKLDYHKEQAVRLKNLVQQSDFPHLLIY--GPSGAGKKTRVMCLLRELYGS 254
           ++   P D+ +L  H + A  LKN  Q ++   +  Y  G SGA     ++   ++ +G+
Sbjct: 588 INGRTPSDIAELAGHYKIASALKNFSQMNELTTMYHYFKGVSGASSDQVMIQPKQQQHGT 647

Query: 255 GV 260
           G+
Sbjct: 648 GL 649


>AY193729-1|AAO62002.1|  499|Anopheles gambiae cytochrome P450
           CYPm3r9 protein.
          Length = 499

 Score = 25.0 bits (52), Expect = 2.0
 Identities = 13/26 (50%), Positives = 18/26 (69%)
 Frame = +3

Query: 141 RLKNLVQQSDFPHLLIYGPSGAGKKT 218
           R+KN VQ++DF  LLI   S  G+K+
Sbjct: 259 RVKNNVQRNDFVDLLIKMMSKDGEKS 284


>AJ439353-1|CAD27923.1| 1127|Anopheles gambiae putative Na-K-Cl
           symporter protein.
          Length = 1127

 Score = 23.4 bits (48), Expect = 6.2
 Identities = 10/14 (71%), Positives = 12/14 (85%)
 Frame = -3

Query: 135 LVLCGNPTSLNLLV 94
           LVLCG+P+S  LLV
Sbjct: 690 LVLCGHPSSRPLLV 703


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 616,786
Number of Sequences: 2352
Number of extensions: 11688
Number of successful extensions: 22
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 62723250
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)