Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmov10i07
         (640 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul...    24   1.1  
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A...    24   1.1  
AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.       23   3.3  
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             23   3.3  
AY263366-1|AAO92605.1|  139|Apis mellifera octopamine receptor p...    22   5.8  
AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor p...    22   5.8  
DQ435327-1|ABD92642.1|  145|Apis mellifera OBP10 protein.              21   7.6  
AB253415-1|BAE86926.1|  588|Apis mellifera alpha-glucosidase pro...    21   7.6  

>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
            AbsCAM-Ig7B protein.
          Length = 1923

 Score = 24.2 bits (50), Expect = 1.1
 Identities = 16/55 (29%), Positives = 21/55 (38%)
 Frame = +1

Query: 208  AGMHKGIETEAAKALEKLCAHTFPLDVTRVESVQEFRKYVLTVLKDNPKYKFHAV 372
            AG    +E  A  + E L   + PL   R   +Q F          NP Y F +V
Sbjct: 1007 AGPPINLEARALSSSEILITWSPPLPELRHGDIQGFNVGYRETSSSNPSYNFSSV 1061


>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
            AbsCAM-Ig7A protein.
          Length = 1919

 Score = 24.2 bits (50), Expect = 1.1
 Identities = 16/55 (29%), Positives = 21/55 (38%)
 Frame = +1

Query: 208  AGMHKGIETEAAKALEKLCAHTFPLDVTRVESVQEFRKYVLTVLKDNPKYKFHAV 372
            AG    +E  A  + E L   + PL   R   +Q F          NP Y F +V
Sbjct: 1003 AGPPINLEARALSSSEILITWSPPLPELRHGDIQGFNVGYRETSSSNPSYNFSSV 1057


>AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.
          Length = 735

 Score = 22.6 bits (46), Expect = 3.3
 Identities = 18/68 (26%), Positives = 30/68 (44%), Gaps = 5/68 (7%)
 Frame = +1

Query: 394 TVGKYEWMTASMIESPVHVNLLGAMRV-ISAFLPEIRKTA----IETTSKPKPRIINVGS 558
           ++ K    TA M + P +  +     V +SA +  +R  A      +   P P I N+ +
Sbjct: 366 SIPKLNLSTALMSQPPPNFGVSQVSPVSMSALVSAVRSPAGGQLPPSAGAPMPPIPNMSN 425

Query: 559 HCGLQPLP 582
             G+ PLP
Sbjct: 426 MSGMPPLP 433


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 22.6 bits (46), Expect = 3.3
 Identities = 9/23 (39%), Positives = 16/23 (69%)
 Frame = -1

Query: 472 LSSRRANSHEPGFLSSMLSSIRT 404
           LSS  ++ HEPG  ++ +++I T
Sbjct: 641 LSSTHSHPHEPGAPATTITTITT 663


>AY263366-1|AAO92605.1|  139|Apis mellifera octopamine receptor
           protein.
          Length = 139

 Score = 21.8 bits (44), Expect = 5.8
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = -2

Query: 453 IHMNRAFYHRCCHPFVLS 400
           +++ RAF   C HP V S
Sbjct: 28  MYLVRAFCRNCIHPTVFS 45


>AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor
           protein.
          Length = 587

 Score = 21.8 bits (44), Expect = 5.8
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = -2

Query: 453 IHMNRAFYHRCCHPFVLS 400
           +++ RAF   C HP V S
Sbjct: 476 MYLVRAFCRNCIHPTVFS 493


>DQ435327-1|ABD92642.1|  145|Apis mellifera OBP10 protein.
          Length = 145

 Score = 21.4 bits (43), Expect = 7.6
 Identities = 6/15 (40%), Positives = 10/15 (66%)
 Frame = +2

Query: 551 LVAIVACSLCPPSLH 595
           L  ++ C +C PS+H
Sbjct: 7   LSLLITCLICSPSVH 21


>AB253415-1|BAE86926.1|  588|Apis mellifera alpha-glucosidase
           protein.
          Length = 588

 Score = 21.4 bits (43), Expect = 7.6
 Identities = 10/34 (29%), Positives = 17/34 (50%)
 Frame = +1

Query: 376 NNAGVMTVGKYEWMTASMIESPVHVNLLGAMRVI 477
           NNA + T      +T +   +PV +N+ G   +I
Sbjct: 526 NNAKIYTSSVNSNLTVNQTVNPVAINIPGDTSII 559


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 174,524
Number of Sequences: 438
Number of extensions: 3721
Number of successful extensions: 10
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 19193721
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)