Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmov10i06
         (491 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q5EQN4 Cluster: NADH dehydrogenase subunit 6; n=1; Perg...    36   0.49 
UniRef50_Q2URY3 Cluster: Predicted protein; n=1; Aspergillus ory...    35   1.1  
UniRef50_Q7RDE6 Cluster: Putative uncharacterized protein PY0547...    33   2.6  
UniRef50_Q7RN41 Cluster: Putative uncharacterized protein PY0198...    32   6.0  
UniRef50_O87160 Cluster: WblD protein; n=1; Vibrio cholerae|Rep:...    32   8.0  
UniRef50_Q24GK3 Cluster: Putative uncharacterized protein; n=1; ...    32   8.0  

>UniRef50_Q5EQN4 Cluster: NADH dehydrogenase subunit 6; n=1; Perga
           condei|Rep: NADH dehydrogenase subunit 6 - Perga condei
          Length = 177

 Score = 35.9 bits (79), Expect = 0.49
 Identities = 26/94 (27%), Positives = 49/94 (52%), Gaps = 1/94 (1%)
 Frame = +3

Query: 6   ISMLFILVYYAFTVGEIHKIVLRSIEKVSVRFLFLTYLAL*KR-PVLRILILKSSSLGGF 182
           +SM+  L+Y  F    I  I L  I  + + F+++T L   K+    +++++ +  L   
Sbjct: 37  MSMMMGLMYKTFWFSYI--IFLIIIGALLILFIYMTNLVPNKKFNFSKLMMMFTLMLSMM 94

Query: 183 FKLYYYIFKPTYIYIFNYIINKAV*NLFS*NHFI 284
             LY YI+KP    +F +++N    N+ + N+FI
Sbjct: 95  NMLYLYIYKPDLNNMFMFVLNXKDMNMINENNFI 128


>UniRef50_Q2URY3 Cluster: Predicted protein; n=1; Aspergillus
           oryzae|Rep: Predicted protein - Aspergillus oryzae
          Length = 502

 Score = 34.7 bits (76), Expect = 1.1
 Identities = 19/76 (25%), Positives = 38/76 (50%), Gaps = 1/76 (1%)
 Frame = +3

Query: 18  FILVYYAFTVGEIHKIVLRSIEKVSVRFLFLTYLAL*KRPVLRILILKSSSLGGFFKLYY 197
           F+ +Y+ F V  +   +  +   ++ R  F T + +  R +L +L+    S  G F L Y
Sbjct: 419 FVYIYF-FVVASLVMFLFAAFAVLARRHNFYTSIGITTRIILGVLLASLVSFVGKFALAY 477

Query: 198 -YIFKPTYIYIFNYII 242
            ++  PT +Y F +++
Sbjct: 478 EFMTSPTILYAFTFVL 493


>UniRef50_Q7RDE6 Cluster: Putative uncharacterized protein PY05476;
            n=9; Plasmodium (Vinckeia)|Rep: Putative uncharacterized
            protein PY05476 - Plasmodium yoelii yoelii
          Length = 3569

 Score = 33.5 bits (73), Expect = 2.6
 Identities = 16/49 (32%), Positives = 28/49 (57%)
 Frame = -2

Query: 418  ISPV*ACENLIYFYINYNTKFTKSIYFYIKFKLFRSKAESFLYK*IKWF 272
            I P+     +I  +I+ N K  KSIY Y    +++ K ++FL+  IK++
Sbjct: 2117 IEPIKNKNKIIKKFISINGKCKKSIYIYFFHYIYKKKIDAFLHIKIKYY 2165


>UniRef50_Q7RN41 Cluster: Putative uncharacterized protein PY01983;
            n=8; Plasmodium (Vinckeia)|Rep: Putative uncharacterized
            protein PY01983 - Plasmodium yoelii yoelii
          Length = 2473

 Score = 32.3 bits (70), Expect = 6.0
 Identities = 19/79 (24%), Positives = 39/79 (49%)
 Frame = +3

Query: 33   YAFTVGEIHKIVLRSIEKVSVRFLFLTYLAL*KRPVLRILILKSSSLGGFFKLYYYIFKP 212
            Y F +     I L +I  ++ + +   Y+ L  R ++  +I+KS S+ G    ++Y+   
Sbjct: 1798 YIFIISYKFNIFLLNIFNINSKLVVHDYV-LPDRCIVDFVIIKSFSIDGNIYTFFYVHDK 1856

Query: 213  TYIYIFNYIINKAV*NLFS 269
             Y YI+  +   ++  L+S
Sbjct: 1857 KYYYIYQLLNYSSISLLYS 1875


>UniRef50_O87160 Cluster: WblD protein; n=1; Vibrio cholerae|Rep:
           WblD protein - Vibrio cholerae
          Length = 398

 Score = 31.9 bits (69), Expect = 8.0
 Identities = 25/87 (28%), Positives = 45/87 (51%), Gaps = 7/87 (8%)
 Frame = +3

Query: 15  LFILVYYAFTVGEIHKIVLRS----IEKVSVRFLFLTYLAL*KRPVLRILILKSSSLGG- 179
           L  L+ + + +  +   +L++    I + S+ F+F  YLAL   P L +L+     +GG 
Sbjct: 40  LLDLLMFFYVMVSVFNYILKNGGLRILRCSLYFIFFLYLAL--FPSLFLLVFSRDVVGGS 97

Query: 180 -FFKLYYYIFKPTYIYIFNYI-INKAV 254
            F   YY+ F    ++ FNY+ +N+ V
Sbjct: 98  VFISQYYFTFTILPLF-FNYLYVNRHV 123


>UniRef50_Q24GK3 Cluster: Putative uncharacterized protein; n=1;
           Tetrahymena thermophila SB210|Rep: Putative
           uncharacterized protein - Tetrahymena thermophila SB210
          Length = 839

 Score = 31.9 bits (69), Expect = 8.0
 Identities = 13/34 (38%), Positives = 23/34 (67%)
 Frame = -3

Query: 387 FIFILIITQNLLNLSIFTLNLNYLGVKLNHFFIN 286
           FIF++    +L NL +F+ +L+Y+G K NH  ++
Sbjct: 642 FIFMIQKLSSLTNLRLFSASLSYIGQKNNHHSVD 675


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 377,401,180
Number of Sequences: 1657284
Number of extensions: 6301911
Number of successful extensions: 14271
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 13491
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14183
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 28437262108
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)