Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmov10i06
         (491 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory recept...    25   0.49 
AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxida...    21   6.1  
EF592178-1|ABQ95974.1|  532|Tribolium castaneum tyrosine hydroxy...    21   8.0  

>AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory receptor
           candidate 43 protein.
          Length = 353

 Score = 24.6 bits (51), Expect = 0.49
 Identities = 23/82 (28%), Positives = 33/82 (40%), Gaps = 5/82 (6%)
 Frame = +3

Query: 12  MLFILVYYAFTVGEIHKIVLRSIEKVSVRFLFLTY-----LAL*KRPVLRILILKSSSLG 176
           M F L+   FT+G+   +  RSI+     F+   Y     LAL    V+ I         
Sbjct: 1   MDFQLLQIMFTIGKFFALTPRSIKLEKQTFIQKFYAVAFFLALSIGVVVSIYSKSFHRNE 60

Query: 177 GFFKLYYYIFKPTYIYIFNYII 242
              K+    FK   +Y FNY +
Sbjct: 61  IHIKIVLMFFKEASLYCFNYYV 82


>AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxidase
           subunit 1 protein.
          Length = 682

 Score = 21.0 bits (42), Expect = 6.1
 Identities = 9/28 (32%), Positives = 17/28 (60%)
 Frame = +3

Query: 24  LVYYAFTVGEIHKIVLRSIEKVSVRFLF 107
           L YYAF+V  +H+   ++++  S   +F
Sbjct: 122 LFYYAFSVALLHRPDTQNLDLPSFIHVF 149


>EF592178-1|ABQ95974.1|  532|Tribolium castaneum tyrosine
           hydroxylase protein.
          Length = 532

 Score = 20.6 bits (41), Expect = 8.0
 Identities = 8/16 (50%), Positives = 12/16 (75%)
 Frame = -2

Query: 145 LSTGLFYSAKYVRNKN 98
           L+  +F S +YVR+KN
Sbjct: 333 LAFRIFQSTQYVRHKN 348


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 99,928
Number of Sequences: 336
Number of extensions: 2058
Number of successful extensions: 4
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 11525470
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)