Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmov10i05
         (552 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY705395-1|AAU12504.1|  569|Anopheles gambiae nicotinic acetylch...    26   0.72 
AY705397-1|AAU12506.1|  555|Anopheles gambiae nicotinic acetylch...    25   1.7  
X85217-1|CAA59483.1| 1231|Anopheles gambiae Anlar protein.             23   6.7  
AY805323-1|AAV66543.1|  459|Anopheles gambiae beta subunit-GABA-...    23   6.7  
AY578798-1|AAT07303.1|  356|Anopheles gambiae baboon protein.          23   6.7  

>AY705395-1|AAU12504.1|  569|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 2 protein.
          Length = 569

 Score = 26.2 bits (55), Expect = 0.72
 Identities = 17/63 (26%), Positives = 24/63 (38%), Gaps = 3/63 (4%)
 Frame = +3

Query: 357 HESSVNSVAWAPAEYGLILACCSSDGSI---SIIQYSQDTGNWDVKKITGAHAIGVNSIS 527
           HE   +   W PAEYG +         I    I+ Y+   G + V  +T A       + 
Sbjct: 90  HEWQDHKFKWDPAEYGGVTELYVPSEHIWLPDIVLYNNADGEYVVTTLTKAILHYTGKVI 149

Query: 528 WCP 536
           W P
Sbjct: 150 WTP 152


>AY705397-1|AAU12506.1|  555|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 4 protein.
          Length = 555

 Score = 25.0 bits (52), Expect = 1.7
 Identities = 15/54 (27%), Positives = 21/54 (38%), Gaps = 3/54 (5%)
 Frame = +3

Query: 384 WAPAEYGLILACCSSDGSI---SIIQYSQDTGNWDVKKITGAHAIGVNSISWCP 536
           W P EYG +         I    I+ Y+   GN++V   T A       + W P
Sbjct: 91  WEPKEYGGVQMLHVPSDHIWRPDIVLYNNADGNFEVTLATKATIYSEGLVEWKP 144


>X85217-1|CAA59483.1| 1231|Anopheles gambiae Anlar protein.
          Length = 1231

 Score = 23.0 bits (47), Expect = 6.7
 Identities = 8/17 (47%), Positives = 10/17 (58%)
 Frame = -2

Query: 539 SWAPTNRINTNGMCTRY 489
           +W P  R + NG  TRY
Sbjct: 131 TWEPPTREHRNGQITRY 147


>AY805323-1|AAV66543.1|  459|Anopheles gambiae beta
           subunit-GABA-A-gated chloride channelprotein.
          Length = 459

 Score = 23.0 bits (47), Expect = 6.7
 Identities = 10/28 (35%), Positives = 19/28 (67%), Gaps = 2/28 (7%)
 Frame = +3

Query: 108 DAELDYYGL--KLATCSSDNSVKIYDIK 185
           +AE   +G   K +TCS+D+ +++ DI+
Sbjct: 324 EAERKVFGKTEKTSTCSADDIIELQDIR 351


>AY578798-1|AAT07303.1|  356|Anopheles gambiae baboon protein.
          Length = 356

 Score = 23.0 bits (47), Expect = 6.7
 Identities = 12/38 (31%), Positives = 18/38 (47%), Gaps = 4/38 (10%)
 Frame = +3

Query: 216 KGHFGPVWQVAWAHPKYGNLLAS----CSYDRKVIIWK 317
           KG FG VW+  W        + S    CS+ R+  I++
Sbjct: 67  KGRFGEVWRGRWRGENVAVKIFSSREECSWSREAEIYQ 104


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 593,144
Number of Sequences: 2352
Number of extensions: 11872
Number of successful extensions: 66
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 66
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 66
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 51301854
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)