Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmov10i05
(552 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At2g30050.1 68415.m03654 transducin family protein / WD-40 repea... 199 9e-52
At3g01340.1 68416.m00051 protein transport protein SEC13 family ... 194 2e-50
At2g26060.1 68415.m03129 transducin family protein / WD-40 repea... 64 8e-11
At4g35050.1 68417.m04974 WD-40 repeat protein (MSI3) contains 5 ... 59 2e-09
At5g67320.1 68418.m08490 WD-40 repeat family protein strong simi... 58 3e-09
At5g56130.1 68418.m07002 transducin family protein / WD-40 repea... 57 9e-09
At2g16780.1 68415.m01924 WD-40 repeat protein (MSI2) contains 5 ... 56 2e-08
At4g32990.1 68417.m04692 transducin family protein / WD-40 repea... 54 6e-08
At5g52820.1 68418.m06556 WD-40 repeat family protein / notchless... 53 1e-07
At5g13480.1 68418.m01554 WD-40 repeat family protein similar to ... 52 2e-07
At5g16750.1 68418.m01961 transducin family protein / WD-40 repea... 52 3e-07
At5g58230.1 68418.m07290 WD-40 repeat protein (MSI1) contains 6 ... 51 4e-07
At2g19520.1 68415.m02281 WD-40 repeat protein (MSI4) contains 6 ... 48 3e-06
At2g32700.5 68415.m04001 WD-40 repeat family protein contains 7 ... 48 4e-06
At2g32700.4 68415.m04000 WD-40 repeat family protein contains 7 ... 48 4e-06
At2g32700.3 68415.m03999 WD-40 repeat family protein contains 7 ... 48 4e-06
At2g32700.2 68415.m03998 WD-40 repeat family protein contains 7 ... 48 4e-06
At2g32700.1 68415.m03997 WD-40 repeat family protein contains 7 ... 48 4e-06
At5g25150.1 68418.m02981 transducin family protein / WD-40 repea... 48 6e-06
At2g41500.1 68415.m05127 WD-40 repeat family protein / small nuc... 48 6e-06
At2g19540.1 68415.m02283 transducin family protein / WD-40 repea... 47 7e-06
At1g29260.1 68414.m03578 peroxisomal targeting signal type 2 rec... 46 1e-05
At3g44530.1 68416.m04786 transducin family protein / WD-40 repea... 46 2e-05
At4g02730.1 68417.m00372 transducin family protein / WD-40 repea... 45 3e-05
At2g16405.1 68415.m01878 transducin family protein / WD-40 repea... 45 3e-05
At4g29730.1 68417.m04233 WD-40 repeat family protein contains 5 ... 45 4e-05
At2g47410.1 68415.m05917 transducin family protein / WD-40 repea... 45 4e-05
At1g61210.1 68414.m06897 WD-40 repeat family protein / katanin p... 45 4e-05
At5g08560.1 68418.m01018 transducin family protein / WD-40 repea... 44 5e-05
At3g16830.1 68416.m02149 WD-40 repeat family protein contains 10... 44 7e-05
At1g71840.1 68414.m08302 transducin family protein / WD-40 repea... 44 7e-05
At5g24520.3 68418.m02893 transparent testa glabra 1 protein (TTG... 44 9e-05
At5g24520.2 68418.m02892 transparent testa glabra 1 protein (TTG... 44 9e-05
At5g24520.1 68418.m02891 transparent testa glabra 1 protein (TTG... 44 9e-05
At2g31300.1 68415.m03821 transducin family protein / WD-40 repea... 44 9e-05
At2g30910.2 68415.m03768 transducin family protein / WD-40 repea... 44 9e-05
At2g30910.1 68415.m03767 transducin family protein / WD-40 repea... 44 9e-05
At3g18060.1 68416.m02297 transducin family protein / WD-40 repea... 43 1e-04
At2g43770.1 68415.m05441 transducin family protein / WD-40 repea... 43 1e-04
At4g11920.1 68417.m01895 WD-40 repeat family protein contains 6 ... 43 2e-04
At1g64350.1 68414.m07292 transducin family protein / WD-40 repea... 43 2e-04
At3g21540.1 68416.m02717 transducin family protein / WD-40 repea... 42 2e-04
At4g32551.1 68417.m04633 WD-40 repeat family protein (LEUNIG) co... 42 3e-04
At1g11160.1 68414.m01278 WD-40 repeat family protein / katanin p... 42 3e-04
At4g22910.1 68417.m03309 WD-40 repeat family protein contains 6 ... 41 5e-04
At1g04140.2 68414.m00404 transducin family protein / WD-40 repea... 41 6e-04
At1g04140.1 68414.m00403 transducin family protein / WD-40 repea... 41 6e-04
At3g26640.1 68416.m03329 transducin family protein / WD-40 repea... 40 8e-04
At2g05720.1 68415.m00613 transducin family protein / WD-40 repea... 40 8e-04
At5g49430.1 68418.m06116 transducin family protein / WD-40 repea... 39 0.002
At1g12910.1 68414.m01499 flower pigmentation protein (AN11) cont... 39 0.003
At5g54520.1 68418.m06788 WD-40 repeat family protein contains 5 ... 38 0.004
At3g15980.3 68416.m02022 coatomer protein complex, subunit beta ... 38 0.004
At3g15980.2 68416.m02021 coatomer protein complex, subunit beta ... 38 0.004
At3g15980.1 68416.m02020 coatomer protein complex, subunit beta ... 38 0.004
At3g15880.2 68416.m02009 WD-40 repeat family protein contains Pf... 38 0.004
At3g15880.1 68416.m02008 WD-40 repeat family protein contains Pf... 38 0.004
At2g01330.1 68415.m00050 transducin family protein / WD-40 repea... 38 0.004
At5g43920.1 68418.m05372 transducin family protein / WD-40 repea... 37 0.008
At3g49660.1 68416.m05427 transducin family protein / WD-40 repea... 37 0.008
At3g20740.1 68416.m02624 fertilization-independent endosperm pro... 37 0.008
At1g49040.1 68414.m05498 stomatal cytokinesis defective / SCD1 p... 37 0.008
At1g18830.1 68414.m02345 transducin family protein / WD-40 repea... 37 0.008
At5g08390.1 68418.m00988 transducin family protein / WD-40 repea... 37 0.010
At3g18860.2 68416.m02396 transducin family protein / WD-40 repea... 37 0.010
At3g18860.1 68416.m02395 transducin family protein / WD-40 repea... 37 0.010
At5g43930.1 68418.m05374 transducin family protein / WD-40 repea... 36 0.014
At2g33340.2 68415.m04087 transducin family protein / WD-40 repea... 36 0.014
At2g33340.1 68415.m04086 transducin family protein / WD-40 repea... 36 0.014
At1g80490.2 68414.m09430 WD-40 repeat family protein contains 9 ... 36 0.014
At1g80490.1 68414.m09429 WD-40 repeat family protein contains 9 ... 36 0.014
At3g63460.2 68416.m07146 WD-40 repeat family protein hypothetica... 36 0.018
At3g63460.1 68416.m07145 WD-40 repeat family protein hypothetica... 36 0.018
At5g64730.1 68418.m08140 transducin family protein / WD-40 repea... 36 0.024
At5g53500.1 68418.m06649 WD-40 repeat family protein contains Pf... 36 0.024
At5g27030.1 68418.m03224 WD-40 repeat family protein contains 8 ... 36 0.024
At5g23430.2 68418.m02749 transducin family protein / WD-40 repea... 36 0.024
At5g23430.1 68418.m02748 transducin family protein / WD-40 repea... 36 0.024
At4g35140.1 68417.m04996 transducin family protein / WD-40 repea... 36 0.024
At4g33270.1 68417.m04734 WD-40 repeat family protein contains 6 ... 36 0.024
At4g33260.1 68417.m04733 WD-40 repeat family protein contains 6 ... 36 0.024
At1g52360.1 68414.m05909 coatomer protein complex, subunit beta ... 36 0.024
At1g48870.1 68414.m05474 WD-40 repeat family protein contains Pf... 31 0.029
At1g79990.1 68414.m09356 coatomer protein complex, subunit beta ... 35 0.031
At4g29830.1 68417.m04246 transducin family protein / WD-40 repea... 35 0.042
At5g27570.1 68418.m03302 WD-40 repeat family protein contains 5 ... 34 0.073
At3g18140.1 68416.m02306 transducin family protein / WD-40 repea... 34 0.073
At1g36070.1 68414.m04484 WD-40 repeat family protein contains 2 ... 34 0.073
At5g27945.1 68418.m03364 transducin family protein / WD-40 repea... 33 0.096
At5g15550.1 68418.m01820 transducin family protein / WD-40 repea... 33 0.096
At4g18905.1 68417.m02787 transducin family protein / WD-40 repea... 33 0.096
At4g18900.1 68417.m02786 transducin family protein / WD-40 repea... 33 0.096
At5g50230.1 68418.m06221 transducin family protein / WD-40 repea... 33 0.13
At1g15750.2 68414.m01890 WD-40 repeat family protein contains 10... 33 0.13
At1g15750.1 68414.m01889 WD-40 repeat family protein contains 10... 33 0.13
At5g27080.1 68418.m03231 WD-40 repeat family protein contains 5 ... 33 0.17
At5g26900.1 68418.m03208 WD-40 repeat family protein contains 5 ... 33 0.17
At4g35370.1 68417.m05025 transducin family protein / WD-40 repea... 33 0.17
At3g16650.1 68416.m02128 PP1/PP2A phosphatases pleiotropic regul... 33 0.17
At1g64610.2 68414.m07324 WD-40 repeat family protein contains Pf... 33 0.17
At1g64610.1 68414.m07323 WD-40 repeat family protein contains Pf... 33 0.17
At3g45620.1 68416.m04927 transducin family protein / WD-40 repea... 32 0.22
At3g09080.1 68416.m01067 transducin family protein / WD-40 repea... 32 0.22
At5g19920.1 68418.m02370 transducin family protein / WD-40 repea... 32 0.29
At4g01860.2 68417.m00244 transducin family protein / WD-40 repea... 32 0.29
At4g01860.1 68417.m00243 transducin family protein / WD-40 repea... 32 0.29
At1g10580.1 68414.m01192 transducin family protein / WD-40 repea... 32 0.29
At5g63010.1 68418.m07905 WD-40 repeat family protein contains 4 ... 31 0.39
At4g34460.3 68417.m04900 guanine nucleotide-binding protein beta... 31 0.39
At4g34460.2 68417.m04898 guanine nucleotide-binding protein beta... 31 0.39
At4g34460.1 68417.m04899 guanine nucleotide-binding protein beta... 31 0.39
At4g15900.1 68417.m02416 PP1/PP2A phosphatases pleiotropic regul... 31 0.39
At2g47990.1 68415.m06006 transducin family protein / WD-40 repea... 31 0.39
At2g22040.1 68415.m02617 transducin family protein / WD-40 repea... 31 0.39
At1g73720.1 68414.m08536 transducin family protein / WD-40 repea... 31 0.39
At3g27640.1 68416.m03452 transducin family protein / WD-40 repea... 31 0.51
At4g25440.1 68417.m03663 WD-40 repeat family protein / zfwd1 pro... 31 0.68
At2g46340.1 68415.m05768 phytochrome A supressor spa1 (SPA1) ide... 31 0.68
At1g78070.2 68414.m09098 WD-40 repeat family protein contains Pf... 31 0.68
At3g10530.1 68416.m01264 transducin family protein / WD-40 repea... 30 0.89
At5g56090.1 68418.m06998 cytochrome oxidase assembly family prot... 30 1.2
At5g05970.1 68418.m00661 transducin family protein / WD-40 repea... 30 1.2
At4g03020.1 68417.m00410 transducin family protein / WD-40 repea... 30 1.2
At1g49540.1 68414.m05553 transducin family protein / WD-40 repea... 30 1.2
At5g50120.1 68418.m06207 transducin family protein / WD-40 repea... 29 1.6
At5g15550.2 68418.m01821 transducin family protein / WD-40 repea... 29 1.6
At3g13340.1 68416.m01679 WD-40 repeat family protein contains Pf... 29 1.6
At2g46290.1 68415.m05758 eukaryotic translation initiation facto... 29 1.6
At1g27840.1 68414.m03412 transducin family protein / WD-40 repea... 29 1.6
At1g04510.1 68414.m00442 transducin family protein / WD-40 repea... 29 1.6
At3g17500.1 68416.m02235 F-box family protein contains Pfam prof... 29 2.1
At1g19485.1 68414.m02427 AT hook motif-containing protein contai... 29 2.1
At3g42660.1 68416.m04436 transducin family protein / WD-40 repea... 29 2.7
At1g15440.2 68414.m01856 transducin family protein / WD-40 repea... 29 2.7
At1g15440.1 68414.m01855 transducin family protein / WD-40 repea... 29 2.7
At5g58760.1 68418.m07360 transducin family protein / WD-40 repea... 28 3.6
At4g28450.1 68417.m04071 transducin family protein / WD-40 repea... 28 3.6
At3g13290.1 68416.m01673 transducin family protein / WD-40 repea... 28 3.6
At1g47610.1 68414.m05288 transducin family protein / WD-40 repea... 28 3.6
At1g55680.1 68414.m06374 WD-40 repeat family protein contains 2 ... 28 4.8
At5g15170.1 68418.m01777 tyrosyl-DNA phosphodiesterase-related s... 27 6.3
At4g38480.1 68417.m05438 transducin family protein / WD-40 repea... 27 6.3
At3g23950.1 68416.m03008 F-box family protein contains Pfam:PF00... 27 6.3
At3g05090.2 68416.m00553 transducin family protein / WD-40 repea... 27 6.3
At3g05090.1 68416.m00552 transducin family protein / WD-40 repea... 27 6.3
At1g29320.1 68414.m03584 transducin family protein / WD-40 repea... 27 6.3
At5g51980.1 68418.m06451 WD-40 repeat family protein / zfwd2 pro... 27 8.3
At5g06820.1 68418.m00771 leucine-rich repeat transmembrane prote... 27 8.3
At3g44600.1 68416.m04794 peptidyl-prolyl cis-trans isomerase cyc... 27 8.3
>At2g30050.1 68415.m03654 transducin family protein / WD-40 repeat
family protein similar to SEC13-related protein
(SP:P55735) [Homo sapiens]
Length = 302
Score = 199 bits (486), Expect = 9e-52
Identities = 90/158 (56%), Positives = 118/158 (74%), Gaps = 4/158 (2%)
Frame = +3
Query: 78 IDTGHEDMIHDAELDYYGLKLATCSSDNSVKIYDIKN--GTQTLAADLKGHFGPVWQVAW 251
I+TGHED++HD ++DYYG ++AT SSD ++KI + N G+Q LA L GH GPVW+VAW
Sbjct: 6 IETGHEDIVHDVQMDYYGKRIATASSDCTIKITGVSNNGGSQQLAT-LTGHRGPVWEVAW 64
Query: 252 AHPKYGNLLASCSYDRKVIIWKE--SGEWTKLYEYTGHESSVNSVAWAPAEYGLILACCS 425
AHPKYG++LASCSYD +VI+WKE +WT+ + +T H+SSVNS+AWAP + GL LAC S
Sbjct: 65 AHPKYGSILASCSYDGQVILWKEGNQNQWTQDHVFTDHKSSVNSIAWAPHDIGLSLACGS 124
Query: 426 SDGSISIIQYSQDTGNWDVKKITGAHAIGVNSISWCPA 539
SDG+IS+ D G WD +I AH +GV S+SW PA
Sbjct: 125 SDGNISVFTARAD-GGWDTSRIDQAHPVGVTSVSWAPA 161
Score = 45.6 bits (103), Expect = 2e-05
Identities = 27/71 (38%), Positives = 39/71 (54%), Gaps = 3/71 (4%)
Frame = +3
Query: 138 LATCSSDNSVKIYDI-KNGTQTLAADLKGHFGPVWQVAWAHPKYGNLLASCSYDRKVIIW 314
+A+ S D V I+ + K G Q LK PVW+V+W+ GNLLA + V +W
Sbjct: 229 IASGSQDGKVIIWTVGKEGEQWEGKVLKDFMTPVWRVSWS--LTGNLLAVSDGNNNVTVW 286
Query: 315 KES--GEWTKL 341
KE+ GEW ++
Sbjct: 287 KEAVDGEWEQV 297
Score = 44.4 bits (100), Expect = 5e-05
Identities = 39/123 (31%), Positives = 62/123 (50%), Gaps = 8/123 (6%)
Frame = +3
Query: 135 KLATCSSDNSVKIYDIKNGTQTLAA--DLKGHFGPVWQVAWAHPKYG---NLLASCSYDR 299
KLA+ DN+VK++ + NG+ + L+ H V VAWA P G + +AS S D
Sbjct: 178 KLASGGCDNTVKVWKLANGSWKMDCFPALQKHTDWVRDVAWA-PNLGLPKSTIASGSQDG 236
Query: 300 KVIIW---KESGEWTKLYEYTGHESSVNSVAWAPAEYGLILACCSSDGSISIIQYSQDTG 470
KVIIW KE +W + V V+W+ G +LA + ++++ + + D G
Sbjct: 237 KVIIWTVGKEGEQWEGKV-LKDFMTPVWRVSWSLT--GNLLAVSDGNNNVTVWKEAVD-G 292
Query: 471 NWD 479
W+
Sbjct: 293 EWE 295
>At3g01340.1 68416.m00051 protein transport protein SEC13 family
protein / WD-40 repeat family protein similar to Protein
transport protein SEC13 SP|Q04491 {Saccharomyces
cerevisiae} and SEC13 (SP:P53024) [Pichia pastoris]
Length = 302
Score = 194 bits (474), Expect = 2e-50
Identities = 90/158 (56%), Positives = 114/158 (72%), Gaps = 4/158 (2%)
Frame = +3
Query: 78 IDTGHEDMIHDAELDYYGLKLATCSSDNSVKIYDIKN--GTQTLAADLKGHFGPVWQVAW 251
I+TGH D IHD +DYYG ++AT SSD ++KI + N G+Q LA L GH GPVWQVAW
Sbjct: 6 IETGHSDTIHDVVMDYYGKRVATASSDCTIKITGVSNSGGSQHLAT-LTGHRGPVWQVAW 64
Query: 252 AHPKYGNLLASCSYDRKVIIWKE--SGEWTKLYEYTGHESSVNSVAWAPAEYGLILACCS 425
AHPK+G+LLASCSYD ++I+WKE +WT+ + +T H+ SVNS+AWAP E GL LAC +
Sbjct: 65 AHPKFGSLLASCSYDGQIILWKEGNQNQWTQAHVFTDHKVSVNSIAWAPHELGLSLACGA 124
Query: 426 SDGSISIIQYSQDTGNWDVKKITGAHAIGVNSISWCPA 539
SDG+IS+ D G WD KI AH +GV S+SW PA
Sbjct: 125 SDGNISVFSARAD-GGWDTTKIDQAHPVGVTSVSWAPA 161
Score = 46.4 bits (105), Expect = 1e-05
Identities = 29/71 (40%), Positives = 39/71 (54%), Gaps = 3/71 (4%)
Frame = +3
Query: 138 LATCSSDNSVKIYDI-KNGTQTLAADLKGHFGPVWQVAWAHPKYGNLLASCSYDRKVIIW 314
+A+ S D V I+ I K G Q LK PVW+V+W+ GNLLA + V +W
Sbjct: 229 IASGSEDGKVIIWTIGKEGEQWEGTVLKDFKTPVWRVSWSLT--GNLLAVSDGNNNVTVW 286
Query: 315 KES--GEWTKL 341
KES GEW ++
Sbjct: 287 KESVDGEWEQV 297
Score = 44.8 bits (101), Expect = 4e-05
Identities = 41/125 (32%), Positives = 65/125 (52%), Gaps = 10/125 (8%)
Frame = +3
Query: 135 KLATCSSDNSVKIYDIKNGTQTLAA--DLKGHFGPVWQVAWAHPKYG---NLLASCSYDR 299
KLA+ D++VK++ NG+ + L H V VAWA P G + +AS S D
Sbjct: 178 KLASGGCDSTVKVWKFSNGSWKMDCFPALNKHTDWVRDVAWA-PNLGLPKSTIASGSEDG 236
Query: 300 KVIIW---KESGEW--TKLYEYTGHESSVNSVAWAPAEYGLILACCSSDGSISIIQYSQD 464
KVIIW KE +W T L ++ ++ V V+W+ G +LA + ++++ + S D
Sbjct: 237 KVIIWTIGKEGEQWEGTVLKDF---KTPVWRVSWSLT--GNLLAVSDGNNNVTVWKESVD 291
Query: 465 TGNWD 479
G W+
Sbjct: 292 -GEWE 295
>At2g26060.1 68415.m03129 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to WD40-repeat containing protein Ciao 1
(SP:O76071) [Homo sapiens]
Length = 352
Score = 63.7 bits (148), Expect = 8e-11
Identities = 44/139 (31%), Positives = 69/139 (49%), Gaps = 4/139 (2%)
Frame = +3
Query: 138 LATCSSDNSVKIYDIKNGTQTLAADL---KGHFGPVWQVAWAHPKYGNLLASCSYDRKVI 308
LA+CS DN+V+I++ + +++ + H V AW+ P G LLA+ S+D
Sbjct: 42 LASCSGDNTVRIWEQSSLSRSWTCKTVLEETHTRTVRSCAWS-PS-GQLLATASFDGTTG 99
Query: 309 IWKESG-EWTKLYEYTGHESSVNSVAWAPAEYGLILACCSSDGSISIIQYSQDTGNWDVK 485
IWK G E+ + GHE+ V SV+W + G LA CS D S+ I + + +D
Sbjct: 100 IWKNYGSEFECISTLEGHENEVKSVSWNAS--GSCLATCSRDKSVWIWEVLEG-NEYDCA 156
Query: 486 KITGAHAIGVNSISWCPAL 542
+ H V + W P +
Sbjct: 157 AVLTGHTQDVKMVQWHPTM 175
Score = 61.3 bits (142), Expect = 4e-10
Identities = 46/134 (34%), Positives = 70/134 (52%), Gaps = 8/134 (5%)
Frame = +3
Query: 69 LNTIDTGHEDMIHDAELDYYGLKLATCSSDNSVKIYDIKNGTQ-TLAADLKGHFGPVWQV 245
++T++ GHE+ + + G LATCS D SV I+++ G + AA L GH V V
Sbjct: 111 ISTLE-GHENEVKSVSWNASGSCLATCSRDKSVWIWEVLEGNEYDCAAVLTGHTQDVKMV 169
Query: 246 AWAHPKYGNLLASCSYDRKVIIW---KESGEW----TKLYEYTGHESSVNSVAWAPAEYG 404
W HP ++L SCSYD + +W + GE+ T GH S+V S+++ A G
Sbjct: 170 QW-HPTM-DVLFSCSYDNTIKVWWSEDDDGEYQCVQTLGESNNGHSSTVWSISFNAA--G 225
Query: 405 LILACCSSDGSISI 446
+ CS D ++ I
Sbjct: 226 DKMVTCSDDLTLKI 239
Score = 60.9 bits (141), Expect = 6e-10
Identities = 45/164 (27%), Positives = 66/164 (40%), Gaps = 2/164 (1%)
Frame = +3
Query: 63 TVLNTIDTGHEDMIHDAELDYYGLKLATCSSDNSVKIYDIKNGTQTLAADLKGHFGPVWQ 242
T ++ H + G LAT S D + I+ + L+GH V
Sbjct: 64 TCKTVLEETHTRTVRSCAWSPSGQLLATASFDGTTGIWKNYGSEFECISTLEGHENEVKS 123
Query: 243 VAWAHPKYGNLLASCSYDRKVIIWK--ESGEWTKLYEYTGHESSVNSVAWAPAEYGLILA 416
V+W G+ LA+CS D+ V IW+ E E+ TGH V V W P +L
Sbjct: 124 VSW--NASGSCLATCSRDKSVWIWEVLEGNEYDCAAVLTGHTQDVKMVQWHPTMD--VLF 179
Query: 417 CCSSDGSISIIQYSQDTGNWDVKKITGAHAIGVNSISWCPALSA 548
CS D +I + D G + + G G +S W + +A
Sbjct: 180 SCSYDNTIKVWWSEDDDGEYQCVQTLGESNNGHSSTVWSISFNA 223
Score = 54.0 bits (124), Expect = 6e-08
Identities = 40/115 (34%), Positives = 54/115 (46%), Gaps = 9/115 (7%)
Frame = +3
Query: 213 LKGHFGPVWQVAW----AHPK-YGNLLASCSYDRKVIIWKESG---EWT-KLYEYTGHES 365
L+GH VW VAW +H +LASCS D V IW++S WT K H
Sbjct: 16 LEGHTDRVWSVAWNPVSSHADGVSPILASCSGDNTVRIWEQSSLSRSWTCKTVLEETHTR 75
Query: 366 SVNSVAWAPAEYGLILACCSSDGSISIIQYSQDTGNWDVKKITGAHAIGVNSISW 530
+V S AW+P+ G +LA S DG+ I + ++ H V S+SW
Sbjct: 76 TVRSCAWSPS--GQLLATASFDGTTGI--WKNYGSEFECISTLEGHENEVKSVSW 126
Score = 44.4 bits (100), Expect = 5e-05
Identities = 43/155 (27%), Positives = 74/155 (47%), Gaps = 22/155 (14%)
Frame = +3
Query: 138 LATCSSDNSVKIY--DIKNG----TQTLAADLKGHFGPVWQVAWAHPKYGNLLASCSYDR 299
L +CS DN++K++ + +G QTL GH VW +++ G+ + +CS D
Sbjct: 178 LFSCSYDNTIKVWWSEDDDGEYQCVQTLGESNNGHSSTVWSISFNAA--GDKMVTCSDDL 235
Query: 300 KVIIW------KESGE----WTKLYEYTG-HESSVNSVAWAPAEYGLILACCSSDGSISI 446
+ IW +SGE W L +G H+ ++ S W+ + I+A + D +I +
Sbjct: 236 TLKIWGTDIAKMQSGEEYAPWIHLCTLSGYHDRTIYSAHWSRDD---IIASGAGDNAIRL 292
Query: 447 IQYSQ----DTGNWDVK-KITGAHAIGVNSISWCP 536
S+ D ++++ K AH VNS+ W P
Sbjct: 293 FVDSKHDSVDGPSYNLLLKKNKAHENDVNSVQWSP 327
Score = 43.2 bits (97), Expect = 1e-04
Identities = 39/149 (26%), Positives = 67/149 (44%), Gaps = 18/149 (12%)
Frame = +3
Query: 60 ITVLNTIDTGHEDMIHDAELDYYGLKLATCSSDNSVKIY--DI---KNGTQTL----AAD 212
+ L + GH + + G K+ TCS D ++KI+ DI ++G +
Sbjct: 202 VQTLGESNNGHSSTVWSISFNAAGDKMVTCSDDLTLKIWGTDIAKMQSGEEYAPWIHLCT 261
Query: 213 LKG-HFGPVWQVAWAHPKYGNLLASCSYDRKVIIWKESGEWT--------KLYEYTGHES 365
L G H ++ W+ +++AS + D + ++ +S + L + HE+
Sbjct: 262 LSGYHDRTIYSAHWSR---DDIIASGAGDNAIRLFVDSKHDSVDGPSYNLLLKKNKAHEN 318
Query: 366 SVNSVAWAPAEYGLILACCSSDGSISIIQ 452
VNSV W+P E +LA S DG + I Q
Sbjct: 319 DVNSVQWSPGEGNRLLASASDDGMVKIWQ 347
Score = 39.1 bits (87), Expect = 0.002
Identities = 24/77 (31%), Positives = 35/77 (45%), Gaps = 6/77 (7%)
Frame = +3
Query: 327 EWTKLYEYTGHESSVNSVAWAPAE-----YGLILACCSSDGSISIIQYSQDTGNWDVKKI 491
E ++ + GH V SVAW P ILA CS D ++ I + S + +W K +
Sbjct: 9 ELVEIQKLEGHTDRVWSVAWNPVSSHADGVSPILASCSGDNTVRIWEQSSLSRSWTCKTV 68
Query: 492 -TGAHAIGVNSISWCPA 539
H V S +W P+
Sbjct: 69 LEETHTRTVRSCAWSPS 85
>At4g35050.1 68417.m04974 WD-40 repeat protein (MSI3) contains 5
WD-40 repeats (PF0400); identical to WD-40 repeat
protein MSI3 (SP:O22469) [Arabidopsis thaliana]
Length = 424
Score = 58.8 bits (136), Expect = 2e-09
Identities = 42/157 (26%), Positives = 76/157 (48%), Gaps = 21/157 (13%)
Frame = +3
Query: 54 IMITVLNTIDTGHEDMIHDAELDYYGLK------LATCSSDNSVKIYDIKNGTQTLAADL 215
++I L T H+ +H+ E++Y LAT SSD++V ++D++ T L L
Sbjct: 243 LVIWDLRTNQMQHQVKVHEREINYLSFNPFNEWVLATASSDSTVALFDLRKLTAPLHV-L 301
Query: 216 KGHFGPVWQVAWAHPKYGNLLASCSYDRKVIIW---------------KESGEWTKLYEY 350
H G V+QV W P + +LAS DR++++W E G L+ +
Sbjct: 302 SKHEGEVFQVEW-DPNHETVLASSGEDRRLMVWDINRVGDEQLEIELDAEDGPPELLFSH 360
Query: 351 TGHESSVNSVAWAPAEYGLILACCSSDGSISIIQYSQ 461
GH++ ++ AW E +++ + D S+ + Q ++
Sbjct: 361 GGHKAKISDFAWNKDE-PWVISSVAEDNSLQVWQMAE 396
Score = 37.1 bits (82), Expect = 0.008
Identities = 21/63 (33%), Positives = 33/63 (52%), Gaps = 5/63 (7%)
Frame = +3
Query: 213 LKGHFGPVWQVAWAHPKYGNLLASCSYDRKVIIWKESGEWTK-----LYEYTGHESSVNS 377
L GH + +AW+ K G LL+ S D+++ +W S T ++ Y GH+S +
Sbjct: 165 LMGHEQEGYGLAWSSFKEGYLLSG-SQDQRICLWDVSATATDKVLNPMHVYEGHQSIIED 223
Query: 378 VAW 386
VAW
Sbjct: 224 VAW 226
Score = 27.1 bits (57), Expect = 8.3
Identities = 26/121 (21%), Positives = 51/121 (42%), Gaps = 1/121 (0%)
Frame = +3
Query: 87 GHEDMIHDAELDYYGLKL-ATCSSDNSVKIYDIKNGTQTLAADLKGHFGPVWQVAWAHPK 263
GH+ +I D + + D + I+D++ T + +K H + +++ +P
Sbjct: 216 GHQSIIEDVAWHMKNENIFGSAGDDCQLVIWDLR--TNQMQHQVKVHEREINYLSF-NPF 272
Query: 264 YGNLLASCSYDRKVIIWKESGEWTKLYEYTGHESSVNSVAWAPAEYGLILACCSSDGSIS 443
+LA+ S D V ++ L+ + HE V V W P + +LA D +
Sbjct: 273 NEWVLATASSDSTVALFDLRKLTAPLHVLSKHEGEVFQVEWDP-NHETVLASSGEDRRLM 331
Query: 444 I 446
+
Sbjct: 332 V 332
>At5g67320.1 68418.m08490 WD-40 repeat family protein strong
similarity to unknown protein (ref|NP_005638.1)
Length = 613
Score = 58.4 bits (135), Expect = 3e-09
Identities = 43/129 (33%), Positives = 66/129 (51%), Gaps = 8/129 (6%)
Frame = +3
Query: 84 TGHEDMIHDAELDYYGLKLATCSSDNSVKIYDIKNGTQTLAADLKGHFGPVWQVAWA--- 254
TGH+ ++ + D G LA+CS D++ KI++IK T DL+ H ++ + W+
Sbjct: 445 TGHQGEVNCVKWDPTGSLLASCSDDSTAKIWNIKQ--STFVHDLREHTKEIYTIRWSPTG 502
Query: 255 ----HPKYGNLLASCSYDRKVIIW-KESGEWTKLYEYTGHESSVNSVAWAPAEYGLILAC 419
+P LAS S+D V +W E G+ L + GH V S+A++P G +A
Sbjct: 503 PGTNNPNKQLTLASASFDSTVKLWDAELGK--MLCSFNGHREPVYSLAFSP--NGEYIAS 558
Query: 420 CSSDGSISI 446
S D SI I
Sbjct: 559 GSLDKSIHI 567
Score = 54.4 bits (125), Expect = 5e-08
Identities = 42/149 (28%), Positives = 64/149 (42%)
Frame = +3
Query: 90 HEDMIHDAELDYYGLKLATCSSDNSVKIYDIKNGTQTLAADLKGHFGPVWQVAWAHPKYG 269
H+ I + + G L T S D + ++D+K + + H GP V W +
Sbjct: 364 HKGPIFSLKWNKKGDYLLTGSVDRTAVVWDVK--AEEWKQQFEFHSGPTLDVDWRN---N 418
Query: 270 NLLASCSYDRKVIIWKESGEWTKLYEYTGHESSVNSVAWAPAEYGLILACCSSDGSISII 449
A+ S D + + K GE +TGH+ VN V W P G +LA CS D + I
Sbjct: 419 VSFATSSTDSMIYLCK-IGETRPAKTFTGHQGEVNCVKWDPT--GSLLASCSDDSTAKIW 475
Query: 450 QYSQDTGNWDVKKITGAHAIGVNSISWCP 536
Q T D+++ H + +I W P
Sbjct: 476 NIKQSTFVHDLRE----HTKEIYTIRWSP 500
>At5g56130.1 68418.m07002 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to beta transducin-like protein HET-E2C*4
(GI:17225206) [Podospora anserina]
Length = 315
Score = 56.8 bits (131), Expect = 9e-09
Identities = 33/98 (33%), Positives = 55/98 (56%), Gaps = 3/98 (3%)
Frame = +3
Query: 87 GHEDMIHDAELDYYGLKLATCSSDNSVKIYDIKNGTQTLAAD--LKGHFGPVWQVAWAHP 260
GH+ +H + G KLA+ S D + +I++I+ + A D LKGH V Q+ W P
Sbjct: 18 GHKKKVHSVAWNSNGTKLASGSVDQTARIWNIEPHGHSKAKDLELKGHTDSVDQLCW-DP 76
Query: 261 KYGNLLASCSYDRKVIIW-KESGEWTKLYEYTGHESSV 371
K+ +L+A+ S D+ V +W SG+ T+ E +G ++
Sbjct: 77 KHSDLVATASGDKSVRLWDARSGKCTQQVELSGENINI 114
Score = 36.7 bits (81), Expect = 0.010
Identities = 27/82 (32%), Positives = 35/82 (42%), Gaps = 3/82 (3%)
Frame = +3
Query: 210 DLKGHFGPVWQVAWAHPKYGNLLASCSYDRKVIIWK---ESGEWTKLYEYTGHESSVNSV 380
+ +GH V VAW G LAS S D+ IW K E GH SV+ +
Sbjct: 15 EYQGHKKKVHSVAWN--SNGTKLASGSVDQTARIWNIEPHGHSKAKDLELKGHTDSVDQL 72
Query: 381 AWAPAEYGLILACCSSDGSISI 446
W P L+ A S D S+ +
Sbjct: 73 CWDPKHSDLV-ATASGDKSVRL 93
Score = 27.1 bits (57), Expect = 8.3
Identities = 21/65 (32%), Positives = 29/65 (44%), Gaps = 1/65 (1%)
Frame = +3
Query: 345 EYTGHESSVNSVAWAPAEYGLILACCSSDGSISIIQYSQDTGNWDVKKI-TGAHAIGVNS 521
EY GH+ V+SVAW G LA S D + I + G+ K + H V+
Sbjct: 15 EYQGHKKKVHSVAW--NSNGTKLASGSVDQTARIWNI-EPHGHSKAKDLELKGHTDSVDQ 71
Query: 522 ISWCP 536
+ W P
Sbjct: 72 LCWDP 76
>At2g16780.1 68415.m01924 WD-40 repeat protein (MSI2) contains 5
WD-40 repeats (PF0400); identical to WD-40 repeat
protein MSI2 (SP:O22468) [Arabidopsis thaliana] WD-40
repeats (PF0400);
Length = 415
Score = 55.6 bits (128), Expect = 2e-08
Identities = 38/145 (26%), Positives = 70/145 (48%), Gaps = 21/145 (14%)
Frame = +3
Query: 90 HEDMIHDAELDYYGLK------LATCSSDNSVKIYDIKNGTQTLAADLKGHFGPVWQVAW 251
H+ +H+ E++Y LAT SSD++V ++D++ L + H G V+QV W
Sbjct: 254 HQVKVHEREVNYLSFNPFNEWVLATASSDSTVALFDLRKLNAPLHV-MSSHEGEVFQVEW 312
Query: 252 AHPKYGNLLASCSYDRKVIIW---------------KESGEWTKLYEYTGHESSVNSVAW 386
P + +LAS DR++++W E G L+ + GH++ ++ AW
Sbjct: 313 -DPNHETVLASSGEDRRLMVWDLNRVGEEQLEIELDAEDGPPELLFSHGGHKAKISDFAW 371
Query: 387 APAEYGLILACCSSDGSISIIQYSQ 461
E ++A + D S+ + Q ++
Sbjct: 372 NKNE-PWVIASVAEDNSLQVWQMAE 395
Score = 37.1 bits (82), Expect = 0.008
Identities = 34/125 (27%), Positives = 54/125 (43%), Gaps = 7/125 (5%)
Frame = +3
Query: 183 KNGTQTLAADLK--GHFGPVWQVAWAHPKYGNLLASCSYDRKVIIWKESGE-----WTKL 341
K+ T DL+ GH + ++W+ K G LL+ S D+K+ +W S +
Sbjct: 152 KSQTSECDPDLRLVGHDKEGYGLSWSPFKEGYLLSG-SQDQKICLWDVSATPQDKVLNAM 210
Query: 342 YEYTGHESSVNSVAWAPAEYGLILACCSSDGSISIIQYSQDTGNWDVKKITGAHAIGVNS 521
+ Y GHES++ V+W L DG + I DT ++ H VN
Sbjct: 211 FVYEGHESAIADVSWHMKNENL-FGSAGEDGRLVI----WDTRTNQMQHQVKVHEREVNY 265
Query: 522 ISWCP 536
+S+ P
Sbjct: 266 LSFNP 270
Score = 27.9 bits (59), Expect = 4.8
Identities = 29/121 (23%), Positives = 49/121 (40%), Gaps = 1/121 (0%)
Frame = +3
Query: 87 GHEDMIHDAELDYYGLKL-ATCSSDNSVKIYDIKNGTQTLAADLKGHFGPVWQVAWAHPK 263
GHE I D L + D + I+D + T + +K H V +++ +P
Sbjct: 215 GHESAIADVSWHMKNENLFGSAGEDGRLVIWDTR--TNQMQHQVKVHEREVNYLSF-NPF 271
Query: 264 YGNLLASCSYDRKVIIWKESGEWTKLYEYTGHESSVNSVAWAPAEYGLILACCSSDGSIS 443
+LA+ S D V ++ L+ + HE V V W P + +LA D +
Sbjct: 272 NEWVLATASSDSTVALFDLRKLNAPLHVMSSHEGEVFQVEWDP-NHETVLASSGEDRRLM 330
Query: 444 I 446
+
Sbjct: 331 V 331
>At4g32990.1 68417.m04692 transducin family protein / WD-40 repeat
family protein HIRA protein, Drosophila melanogaster,
PID:e1250847
Length = 318
Score = 54.0 bits (124), Expect = 6e-08
Identities = 46/131 (35%), Positives = 65/131 (49%), Gaps = 11/131 (8%)
Frame = +3
Query: 87 GHEDMIHDAELDYYGLKLATCSSDNSVKIYDIK----NGTQTLAADLKGHFGPVWQVAWA 254
GHE + + G LATC D SV I++I+ + T+A L GH V V W
Sbjct: 90 GHESEVKSVSWNASGSLLATCGRDKSVWIWEIQPEEDDEFDTIAV-LTGHSEDVKMVLW- 147
Query: 255 HPKYGNLLASCSYDRKVIIW---KESGEWT---KLYEY-TGHESSVNSVAWAPAEYGLIL 413
HP ++L SCSYD + IW E G++ L E GH S+V S+++ A G +
Sbjct: 148 HPTM-DVLFSCSYDNTIKIWCSEDEDGDYNCVQTLSELNNGHSSTVWSISFNAA--GDKM 204
Query: 414 ACCSSDGSISI 446
CS D ++ I
Sbjct: 205 VTCSDDLAVKI 215
Score = 53.2 bits (122), Expect = 1e-07
Identities = 46/158 (29%), Positives = 75/158 (47%), Gaps = 21/158 (13%)
Frame = +3
Query: 138 LATCSSDNSVKIYDIK------NGTQTLAADLKGHFGPVWQVAWAHPKYGNLLASCSYDR 299
L +CS DN++KI+ + N QTL+ GH VW +++ G+ + +CS D
Sbjct: 154 LFSCSYDNTIKIWCSEDEDGDYNCVQTLSELNNGHSSTVWSISFNAA--GDKMVTCSDDL 211
Query: 300 KVIIWK------ESGE----WTKLYEYTG-HESSVNSVAWAPAEYGLILACCSSDGSISI 446
V IWK +SGE WT + +G H+ ++ SV W+ G+I + D
Sbjct: 212 AVKIWKTDISRMQSGEGYVPWTHVCTLSGFHDRTIYSVHWS--RDGVIASGAGDDTIQLF 269
Query: 447 IQYSQDTGNWDVKKIT----GAHAIGVNSISWCPALSA 548
+ D+ + K+ AH + VNS+ W P +S+
Sbjct: 270 VDSDSDSVDGPSYKLLVKKEKAHEMDVNSVQWAPDVSS 307
Score = 50.8 bits (116), Expect = 6e-07
Identities = 44/155 (28%), Positives = 69/155 (44%), Gaps = 29/155 (18%)
Frame = +3
Query: 165 VKIYDIKNGTQTLAADLKGHFGPVWQVAWAHPKYGNLLASCSYDRKVIIWKESG---EWT 335
+K+ D G + + L+GH VW VAW +P ++ASCS D+ V IW++S WT
Sbjct: 1 MKVMDKNLGLEEVQK-LEGHTDRVWNVAW-NPAADGVIASCSADKTVRIWEQSSLTRSWT 58
Query: 336 -----KLYEYTG--------------------HESSVNSVAWAPAEYGLILACCSSDGSI 440
+L + G HES V SV+W + G +LA C D S+
Sbjct: 59 CKLGHRLGSFDGNTCVWENFATDSESVSVLRGHESEVKSVSWNAS--GSLLATCGRDKSV 116
Query: 441 SIIQYS-QDTGNWDVKKITGAHAIGVNSISWCPAL 542
I + ++ +D + H+ V + W P +
Sbjct: 117 WIWEIQPEEDDEFDTIAVLTGHSEDVKMVLWHPTM 151
Score = 35.9 bits (79), Expect = 0.018
Identities = 37/129 (28%), Positives = 59/129 (45%), Gaps = 18/129 (13%)
Frame = +3
Query: 60 ITVLNTIDTGHEDMIHDAELDYYGLKLATCSSDNSVKIY--DI---KNG----TQTLAAD 212
+ L+ ++ GH + + G K+ TCS D +VKI+ DI ++G T
Sbjct: 178 VQTLSELNNGHSSTVWSISFNAAGDKMVTCSDDLAVKIWKTDISRMQSGEGYVPWTHVCT 237
Query: 213 LKG-HFGPVWQVAWAHPKYGNLLASCSYDRKVIIWKES------GEWTKLY--EYTGHES 365
L G H ++ V W+ ++AS + D + ++ +S G KL + HE
Sbjct: 238 LSGFHDRTIYSVHWSR---DGVIASGAGDDTIQLFVDSDSDSVDGPSYKLLVKKEKAHEM 294
Query: 366 SVNSVAWAP 392
VNSV WAP
Sbjct: 295 DVNSVQWAP 303
>At5g52820.1 68418.m06556 WD-40 repeat family protein / notchless
protein, putative similar to notchless [Xenopus laevis]
GI:3687833; contains Pfam PF00400: WD domain, G-beta
repeat (8 copies)
Length = 473
Score = 52.8 bits (121), Expect = 1e-07
Identities = 34/104 (32%), Positives = 53/104 (50%), Gaps = 1/104 (0%)
Frame = +3
Query: 84 TGHEDMIHDAELDYYGLKLATCSSDNSVKIYDIKNG-TQTLAADLKGHFGPVWQVAWAHP 260
TGH+ +++ G +A+ S D SV+++ NG T +GH GPV+QV+W+
Sbjct: 357 TGHQQLVNHVYFSPDGKWIASASFDKSVRLW---NGITGQFVTVFRGHVGPVYQVSWSAD 413
Query: 261 KYGNLLASCSYDRKVIIWKESGEWTKLYEYTGHESSVNSVAWAP 392
LL S S D + IW+ + K + GH V +V W+P
Sbjct: 414 --SRLLLSGSKDSTLKIWEIRTKKLK-QDLPGHADEVFAVDWSP 454
Score = 38.3 bits (85), Expect = 0.003
Identities = 39/123 (31%), Positives = 57/123 (46%)
Frame = +3
Query: 168 KIYDIKNGTQTLAADLKGHFGPVWQVAWAHPKYGNLLASCSYDRKVIIWKESGEWTKLYE 347
+I + +QT+A GH V V+++ G LAS S D V +W E T L+
Sbjct: 94 RIRPVNRCSQTIA----GHAEAVLCVSFSPD--GKQLASGSGDTTVRLWDLYTE-TPLFT 146
Query: 348 YTGHESSVNSVAWAPAEYGLILACCSSDGSISIIQYSQDTGNWDVKKITGAHAIGVNSIS 527
GH++ V +VAW+P G L S G I ++ G + +TG H + IS
Sbjct: 147 CKGHKNWVLTVAWSPD--GKHLVSGSKSGEICC--WNPKKGELEGSPLTG-HKKWITGIS 201
Query: 528 WCP 536
W P
Sbjct: 202 WEP 204
Score = 28.3 bits (60), Expect = 3.6
Identities = 26/85 (30%), Positives = 39/85 (45%)
Frame = +3
Query: 276 LASCSYDRKVIIWKESGEWTKLYEYTGHESSVNSVAWAPAEYGLILACCSSDGSISIIQY 455
L S S D + +W+ S TGH+ VN V ++P G +A S D S+ + +
Sbjct: 332 LVSGSDDFTMFLWEPSVSKQPKKRLTGHQQLVNHVYFSPD--GKWIASASFDKSVRL--W 387
Query: 456 SQDTGNWDVKKITGAHAIGVNSISW 530
+ TG + V G H V +SW
Sbjct: 388 NGITGQF-VTVFRG-HVGPVYQVSW 410
>At5g13480.1 68418.m01554 WD-40 repeat family protein similar to
WD-repeat protein WDC146 (SP:Q9C0J8|) {Homo sapiens};
contains 3 weak Pfam PF00400: WD domain, G-beta repeats;
Length = 711
Score = 52.4 bits (120), Expect = 2e-07
Identities = 34/115 (29%), Positives = 53/115 (46%)
Frame = +3
Query: 87 GHEDMIHDAELDYYGLKLATCSSDNSVKIYDIKNGTQTLAADLKGHFGPVWQVAWAHPKY 266
GH++++ + + G L T S D +K+YDI+ T +GH V +AW HP +
Sbjct: 308 GHKNIVLSVKWNQNGNWLLTASKDQIIKLYDIR--TMKELQSFRGHTKDVTSLAW-HPCH 364
Query: 267 GNLLASCSYDRKVIIWKESGEWTKLYEYTGHESSVNSVAWAPAEYGLILACCSSD 431
S S D + W E ++ H++SV +AW P Y L C S+
Sbjct: 365 EEYFVSGSSDGSICHWIVGHENPQIEIPNAHDNSVWDLAWHPIGY---LLCSGSN 416
Score = 37.1 bits (82), Expect = 0.008
Identities = 47/168 (27%), Positives = 70/168 (41%), Gaps = 17/168 (10%)
Frame = +3
Query: 84 TGHEDMIHDAELDYYGLKLATCSSDNSVKIYD-------------IKNGTQTLAADL--- 215
T H++ I D LK +CS D +VK++D I G + +
Sbjct: 204 TAHKESIRDLSFCKTDLKFCSCSDDTTVKVWDFTKCVDESSLTGYIGKGVIEIRFGVMPC 263
Query: 216 -KGHFGPVWQVAWAHPKYGNLLASCSYDRKVIIWKESGEWTKLYEYTGHESSVNSVAWAP 392
GH V V W HP +LL S D+ V +W ++ +L GH++ V SV W
Sbjct: 264 NAGHGWDVKSVDW-HPT-KSLLVSGGKDQLVKLW-DTRSGRELCSLHGHKNIVLSVKW-- 318
Query: 393 AEYGLILACCSSDGSISIIQYSQDTGNWDVKKITGAHAIGVNSISWCP 536
+ G L S D I + Y T +++ G H V S++W P
Sbjct: 319 NQNGNWLLTASKDQIIKL--YDIRTMK-ELQSFRG-HTKDVTSLAWHP 362
>At5g16750.1 68418.m01961 transducin family protein / WD-40 repeat
family protein contains 8 WD-40 repeats (PF00400);
similar to transducin homolog sazD - Homo sapiens,
EMBL:U02609
Length = 876
Score = 52.0 bits (119), Expect = 3e-07
Identities = 42/155 (27%), Positives = 68/155 (43%)
Frame = +3
Query: 63 TVLNTIDTGHEDMIHDAELDYYGLKLATCSSDNSVKIYDIKNGTQTLAADLKGHFGPVWQ 242
+V +TI+ G D + L L + ++++D++ T KGH GPV
Sbjct: 51 SVKSTIE-GESDTLTALALSPDDKLLFSAGHSRQIRVWDLE--TLKCIRSWKGHEGPVMG 107
Query: 243 VAWAHPKYGNLLASCSYDRKVIIWKESGEWTKLYEYTGHESSVNSVAWAPAEYGLILACC 422
+A H G LLA+ DRKV++W G + Y + GH+ V+S+ + P IL
Sbjct: 108 MA-CHAS-GGLLATAGADRKVLVWDVDGGFCTHY-FRGHKGVVSSILFHPDSNKNILISG 164
Query: 423 SSDGSISIIQYSQDTGNWDVKKITGAHAIGVNSIS 527
S D ++ + + I H V SI+
Sbjct: 165 SDDATVRVWDLNAKNTEKKCLAIMEKHFSAVTSIA 199
Score = 31.1 bits (67), Expect = 0.51
Identities = 25/99 (25%), Positives = 41/99 (41%)
Frame = +3
Query: 87 GHEDMIHDAELDYYGLKLATCSSDNSVKIYDIKNGTQTLAADLKGHFGPVWQVAWAHPKY 266
GH+ I E + T S D +VKI+ I +G + +GH V + ++
Sbjct: 539 GHKRRIFSVEFSTVDQCVMTASGDKTVKIWAISDG--SCLKTFEGHTSSVLRASFITD-- 594
Query: 267 GNLLASCSYDRKVIIWKESGEWTKLYEYTGHESSVNSVA 383
G SC D + +W + + Y HE V ++A
Sbjct: 595 GTQFVSCGADGLLKLWNVNTS-ECIATYDQHEDKVWALA 632
>At5g58230.1 68418.m07290 WD-40 repeat protein (MSI1) contains 6
WD-40 repeats (PF0400); identical to WD-40 repeat
protein (SP:O22467) [Arabidopsis thaliana]
Length = 424
Score = 51.2 bits (117), Expect = 4e-07
Identities = 33/122 (27%), Positives = 60/122 (49%), Gaps = 13/122 (10%)
Frame = +3
Query: 138 LATCSSDNSVKIYDIKNGTQTLAADLKGHFGPVWQVAWAHPKYGNLLASCSYDRKVIIW- 314
+AT S+D +VK++D++ T H V+QV W +PK +LASC R++++W
Sbjct: 289 VATGSTDKTVKLFDLRK-LSTALHTFDSHKEEVFQVGW-NPKNETILASCCLGRRLMVWD 346
Query: 315 ------------KESGEWTKLYEYTGHESSVNSVAWAPAEYGLILACCSSDGSISIIQYS 458
E G L+ + GH S ++ +W P E +++ + D + I Q +
Sbjct: 347 LSRIDEEQTVEDAEDGPPELLFIHGGHTSKISDFSWNPCE-DWVISSVAEDNILQIWQMA 405
Query: 459 QD 464
++
Sbjct: 406 EN 407
Score = 31.9 bits (69), Expect = 0.29
Identities = 26/113 (23%), Positives = 50/113 (44%), Gaps = 5/113 (4%)
Frame = +3
Query: 213 LKGHFGPVWQVAWAHPKYGNLLASCSYDRKVIIW-----KESGEWTKLYEYTGHESSVNS 377
L+GH + ++W+ K G+LL S S D ++ +W ++ + HE V
Sbjct: 174 LRGHSSEGYGLSWSKFKQGHLL-SGSDDAQICLWDINATPKNKSLDAQQIFKAHEGVVED 232
Query: 378 VAWAPAEYGLILACCSSDGSISIIQYSQDTGNWDVKKITGAHAIGVNSISWCP 536
VAW + + D + I + + V+ + AH++ VN +++ P
Sbjct: 233 VAW-HLRHEYLFGSVGDDQYLLIWDLRSPSASKPVQSVV-AHSMEVNCLAFNP 283
Score = 29.9 bits (64), Expect = 1.2
Identities = 23/97 (23%), Positives = 41/97 (42%), Gaps = 9/97 (9%)
Frame = +3
Query: 273 LLASCSYDRKVIIWKESGEWTKLYEYTGHESSVNSVAWAPAEYGLILACCSSD----GSI 440
++A+ S D+ V ++ T L+ + H+ V V W P ++ +CC +
Sbjct: 288 VVATGSTDKTVKLFDLRKLSTALHTFDSHKEEVFQVGWNPKNETILASCCLGRRLMVWDL 347
Query: 441 SIIQYSQ-----DTGNWDVKKITGAHAIGVNSISWCP 536
S I Q + G ++ I G H ++ SW P
Sbjct: 348 SRIDEEQTVEDAEDGPPELLFIHGGHTSKISDFSWNP 384
>At2g19520.1 68415.m02281 WD-40 repeat protein (MSI4) contains 6 (4
significant) WD-40 repeats (PF0400); identical to WD-40
repeat protein MSI4 (SP:O22607) [Arabidopsis thaliana]
Length = 507
Score = 48.4 bits (110), Expect = 3e-06
Identities = 31/131 (23%), Positives = 61/131 (46%), Gaps = 6/131 (4%)
Frame = +3
Query: 87 GHEDMIHDAELDYYGLK-LATCSSDNSVKIYDIKNGTQTLAADLKGHFGPVWQVAWAHPK 263
GHED + D + + D+ + ++D + GT + K H + V W +P
Sbjct: 290 GHEDTVEDVAFSPTSAQEFCSVGDDSCLILWDARTGTNPVTKVEKAHDADLHCVDW-NPH 348
Query: 264 YGNLLASCSYDRKVIIWKE-----SGEWTKLYEYTGHESSVNSVAWAPAEYGLILACCSS 428
NL+ + S D V ++ +G + +Y++ GH+++V V W+P + + +
Sbjct: 349 DDNLILTGSADNTVRLFDRRKLTANGVGSPIYKFEGHKAAVLCVQWSP-DKSSVFGSSAE 407
Query: 429 DGSISIIQYSQ 461
DG ++I Y +
Sbjct: 408 DGLLNIWDYDR 418
>At2g32700.5 68415.m04001 WD-40 repeat family protein contains 7
WD-40 repeats ; similar to LEUNIG
(GP:11141605)[Arabidopsis thaliana]
Length = 785
Score = 48.0 bits (109), Expect = 4e-06
Identities = 38/149 (25%), Positives = 64/149 (42%)
Frame = +3
Query: 90 HEDMIHDAELDYYGLKLATCSSDNSVKIYDIKNGTQTLAADLKGHFGPVWQVAWAHPKYG 269
H +I D +LAT S D ++KI+D + L + GH PV + + HPK
Sbjct: 549 HAHIITDVRFRPNSTQLATSSFDKTIKIWDASDPGYFLRT-ISGHAAPVMSIDF-HPKKT 606
Query: 270 NLLASCSYDRKVIIWKESGEWTKLYEYTGHESSVNSVAWAPAEYGLILACCSSDGSISII 449
LL SC + + W + + + + V + P G LA +S+ ++SI
Sbjct: 607 ELLCSCDSNNDIRFWDINASCVRAV-----KGASTQVRFQP-RTGQFLA-AASENTVSIF 659
Query: 450 QYSQDTGNWDVKKITGAHAIGVNSISWCP 536
+ ++ K H+ V+S+ W P
Sbjct: 660 DIENNNKRVNIFK---GHSSNVHSVCWSP 685
Score = 39.1 bits (87), Expect = 0.002
Identities = 29/98 (29%), Positives = 50/98 (51%)
Frame = +3
Query: 138 LATCSSDNSVKIYDIKNGTQTLAADLKGHFGPVWQVAWAHPKYGNLLASCSYDRKVIIWK 317
L +C S+N ++ +DI A+ ++ G QV + P+ G LA+ S + V I+
Sbjct: 609 LCSCDSNNDIRFWDIN------ASCVRAVKGASTQVRF-QPRTGQFLAAAS-ENTVSIFD 660
Query: 318 ESGEWTKLYEYTGHESSVNSVAWAPAEYGLILACCSSD 431
++ + GH S+V+SV W+P G ++A S D
Sbjct: 661 IENNNKRVNIFKGHSSNVHSVCWSP--NGELVASVSED 696
Score = 34.3 bits (75), Expect = 0.055
Identities = 27/103 (26%), Positives = 50/103 (48%)
Frame = +3
Query: 123 YYGLKLATCSSDNSVKIYDIKNGTQTLAADLKGHFGPVWQVAWAHPKYGNLLASCSYDRK 302
Y G LA+ D V I++++ T + + + H + V + P LA+ S+D+
Sbjct: 518 YDGKLLASAGHDKKVFIWNME--TLQVESTPEEHAHIITDVRF-RPN-STQLATSSFDKT 573
Query: 303 VIIWKESGEWTKLYEYTGHESSVNSVAWAPAEYGLILACCSSD 431
+ IW S L +GH + V S+ + P + L+ +C S++
Sbjct: 574 IKIWDASDPGYFLRTISGHAAPVMSIDFHPKKTELLCSCDSNN 616
>At2g32700.4 68415.m04000 WD-40 repeat family protein contains 7
WD-40 repeats ; similar to LEUNIG
(GP:11141605)[Arabidopsis thaliana]
Length = 787
Score = 48.0 bits (109), Expect = 4e-06
Identities = 38/149 (25%), Positives = 64/149 (42%)
Frame = +3
Query: 90 HEDMIHDAELDYYGLKLATCSSDNSVKIYDIKNGTQTLAADLKGHFGPVWQVAWAHPKYG 269
H +I D +LAT S D ++KI+D + L + GH PV + + HPK
Sbjct: 551 HAHIITDVRFRPNSTQLATSSFDKTIKIWDASDPGYFLRT-ISGHAAPVMSIDF-HPKKT 608
Query: 270 NLLASCSYDRKVIIWKESGEWTKLYEYTGHESSVNSVAWAPAEYGLILACCSSDGSISII 449
LL SC + + W + + + + V + P G LA +S+ ++SI
Sbjct: 609 ELLCSCDSNNDIRFWDINASCVRAV-----KGASTQVRFQP-RTGQFLA-AASENTVSIF 661
Query: 450 QYSQDTGNWDVKKITGAHAIGVNSISWCP 536
+ ++ K H+ V+S+ W P
Sbjct: 662 DIENNNKRVNIFK---GHSSNVHSVCWSP 687
Score = 39.1 bits (87), Expect = 0.002
Identities = 29/98 (29%), Positives = 50/98 (51%)
Frame = +3
Query: 138 LATCSSDNSVKIYDIKNGTQTLAADLKGHFGPVWQVAWAHPKYGNLLASCSYDRKVIIWK 317
L +C S+N ++ +DI A+ ++ G QV + P+ G LA+ S + V I+
Sbjct: 611 LCSCDSNNDIRFWDIN------ASCVRAVKGASTQVRF-QPRTGQFLAAAS-ENTVSIFD 662
Query: 318 ESGEWTKLYEYTGHESSVNSVAWAPAEYGLILACCSSD 431
++ + GH S+V+SV W+P G ++A S D
Sbjct: 663 IENNNKRVNIFKGHSSNVHSVCWSP--NGELVASVSED 698
Score = 34.3 bits (75), Expect = 0.055
Identities = 27/103 (26%), Positives = 50/103 (48%)
Frame = +3
Query: 123 YYGLKLATCSSDNSVKIYDIKNGTQTLAADLKGHFGPVWQVAWAHPKYGNLLASCSYDRK 302
Y G LA+ D V I++++ T + + + H + V + P LA+ S+D+
Sbjct: 520 YDGKLLASAGHDKKVFIWNME--TLQVESTPEEHAHIITDVRF-RPN-STQLATSSFDKT 575
Query: 303 VIIWKESGEWTKLYEYTGHESSVNSVAWAPAEYGLILACCSSD 431
+ IW S L +GH + V S+ + P + L+ +C S++
Sbjct: 576 IKIWDASDPGYFLRTISGHAAPVMSIDFHPKKTELLCSCDSNN 618
>At2g32700.3 68415.m03999 WD-40 repeat family protein contains 7
WD-40 repeats ; similar to LEUNIG
(GP:11141605)[Arabidopsis thaliana]
Length = 787
Score = 48.0 bits (109), Expect = 4e-06
Identities = 38/149 (25%), Positives = 64/149 (42%)
Frame = +3
Query: 90 HEDMIHDAELDYYGLKLATCSSDNSVKIYDIKNGTQTLAADLKGHFGPVWQVAWAHPKYG 269
H +I D +LAT S D ++KI+D + L + GH PV + + HPK
Sbjct: 551 HAHIITDVRFRPNSTQLATSSFDKTIKIWDASDPGYFLRT-ISGHAAPVMSIDF-HPKKT 608
Query: 270 NLLASCSYDRKVIIWKESGEWTKLYEYTGHESSVNSVAWAPAEYGLILACCSSDGSISII 449
LL SC + + W + + + + V + P G LA +S+ ++SI
Sbjct: 609 ELLCSCDSNNDIRFWDINASCVRAV-----KGASTQVRFQP-RTGQFLA-AASENTVSIF 661
Query: 450 QYSQDTGNWDVKKITGAHAIGVNSISWCP 536
+ ++ K H+ V+S+ W P
Sbjct: 662 DIENNNKRVNIFK---GHSSNVHSVCWSP 687
Score = 39.1 bits (87), Expect = 0.002
Identities = 29/98 (29%), Positives = 50/98 (51%)
Frame = +3
Query: 138 LATCSSDNSVKIYDIKNGTQTLAADLKGHFGPVWQVAWAHPKYGNLLASCSYDRKVIIWK 317
L +C S+N ++ +DI A+ ++ G QV + P+ G LA+ S + V I+
Sbjct: 611 LCSCDSNNDIRFWDIN------ASCVRAVKGASTQVRF-QPRTGQFLAAAS-ENTVSIFD 662
Query: 318 ESGEWTKLYEYTGHESSVNSVAWAPAEYGLILACCSSD 431
++ + GH S+V+SV W+P G ++A S D
Sbjct: 663 IENNNKRVNIFKGHSSNVHSVCWSP--NGELVASVSED 698
Score = 34.3 bits (75), Expect = 0.055
Identities = 27/103 (26%), Positives = 50/103 (48%)
Frame = +3
Query: 123 YYGLKLATCSSDNSVKIYDIKNGTQTLAADLKGHFGPVWQVAWAHPKYGNLLASCSYDRK 302
Y G LA+ D V I++++ T + + + H + V + P LA+ S+D+
Sbjct: 520 YDGKLLASAGHDKKVFIWNME--TLQVESTPEEHAHIITDVRF-RPN-STQLATSSFDKT 575
Query: 303 VIIWKESGEWTKLYEYTGHESSVNSVAWAPAEYGLILACCSSD 431
+ IW S L +GH + V S+ + P + L+ +C S++
Sbjct: 576 IKIWDASDPGYFLRTISGHAAPVMSIDFHPKKTELLCSCDSNN 618
>At2g32700.2 68415.m03998 WD-40 repeat family protein contains 7
WD-40 repeats ; similar to LEUNIG
(GP:11141605)[Arabidopsis thaliana]
Length = 787
Score = 48.0 bits (109), Expect = 4e-06
Identities = 38/149 (25%), Positives = 64/149 (42%)
Frame = +3
Query: 90 HEDMIHDAELDYYGLKLATCSSDNSVKIYDIKNGTQTLAADLKGHFGPVWQVAWAHPKYG 269
H +I D +LAT S D ++KI+D + L + GH PV + + HPK
Sbjct: 551 HAHIITDVRFRPNSTQLATSSFDKTIKIWDASDPGYFLRT-ISGHAAPVMSIDF-HPKKT 608
Query: 270 NLLASCSYDRKVIIWKESGEWTKLYEYTGHESSVNSVAWAPAEYGLILACCSSDGSISII 449
LL SC + + W + + + + V + P G LA +S+ ++SI
Sbjct: 609 ELLCSCDSNNDIRFWDINASCVRAV-----KGASTQVRFQP-RTGQFLA-AASENTVSIF 661
Query: 450 QYSQDTGNWDVKKITGAHAIGVNSISWCP 536
+ ++ K H+ V+S+ W P
Sbjct: 662 DIENNNKRVNIFK---GHSSNVHSVCWSP 687
Score = 39.1 bits (87), Expect = 0.002
Identities = 29/98 (29%), Positives = 50/98 (51%)
Frame = +3
Query: 138 LATCSSDNSVKIYDIKNGTQTLAADLKGHFGPVWQVAWAHPKYGNLLASCSYDRKVIIWK 317
L +C S+N ++ +DI A+ ++ G QV + P+ G LA+ S + V I+
Sbjct: 611 LCSCDSNNDIRFWDIN------ASCVRAVKGASTQVRF-QPRTGQFLAAAS-ENTVSIFD 662
Query: 318 ESGEWTKLYEYTGHESSVNSVAWAPAEYGLILACCSSD 431
++ + GH S+V+SV W+P G ++A S D
Sbjct: 663 IENNNKRVNIFKGHSSNVHSVCWSP--NGELVASVSED 698
Score = 34.3 bits (75), Expect = 0.055
Identities = 27/103 (26%), Positives = 50/103 (48%)
Frame = +3
Query: 123 YYGLKLATCSSDNSVKIYDIKNGTQTLAADLKGHFGPVWQVAWAHPKYGNLLASCSYDRK 302
Y G LA+ D V I++++ T + + + H + V + P LA+ S+D+
Sbjct: 520 YDGKLLASAGHDKKVFIWNME--TLQVESTPEEHAHIITDVRF-RPN-STQLATSSFDKT 575
Query: 303 VIIWKESGEWTKLYEYTGHESSVNSVAWAPAEYGLILACCSSD 431
+ IW S L +GH + V S+ + P + L+ +C S++
Sbjct: 576 IKIWDASDPGYFLRTISGHAAPVMSIDFHPKKTELLCSCDSNN 618
>At2g32700.1 68415.m03997 WD-40 repeat family protein contains 7
WD-40 repeats ; similar to LEUNIG
(GP:11141605)[Arabidopsis thaliana]
Length = 787
Score = 48.0 bits (109), Expect = 4e-06
Identities = 38/149 (25%), Positives = 64/149 (42%)
Frame = +3
Query: 90 HEDMIHDAELDYYGLKLATCSSDNSVKIYDIKNGTQTLAADLKGHFGPVWQVAWAHPKYG 269
H +I D +LAT S D ++KI+D + L + GH PV + + HPK
Sbjct: 551 HAHIITDVRFRPNSTQLATSSFDKTIKIWDASDPGYFLRT-ISGHAAPVMSIDF-HPKKT 608
Query: 270 NLLASCSYDRKVIIWKESGEWTKLYEYTGHESSVNSVAWAPAEYGLILACCSSDGSISII 449
LL SC + + W + + + + V + P G LA +S+ ++SI
Sbjct: 609 ELLCSCDSNNDIRFWDINASCVRAV-----KGASTQVRFQP-RTGQFLA-AASENTVSIF 661
Query: 450 QYSQDTGNWDVKKITGAHAIGVNSISWCP 536
+ ++ K H+ V+S+ W P
Sbjct: 662 DIENNNKRVNIFK---GHSSNVHSVCWSP 687
Score = 39.1 bits (87), Expect = 0.002
Identities = 29/98 (29%), Positives = 50/98 (51%)
Frame = +3
Query: 138 LATCSSDNSVKIYDIKNGTQTLAADLKGHFGPVWQVAWAHPKYGNLLASCSYDRKVIIWK 317
L +C S+N ++ +DI A+ ++ G QV + P+ G LA+ S + V I+
Sbjct: 611 LCSCDSNNDIRFWDIN------ASCVRAVKGASTQVRF-QPRTGQFLAAAS-ENTVSIFD 662
Query: 318 ESGEWTKLYEYTGHESSVNSVAWAPAEYGLILACCSSD 431
++ + GH S+V+SV W+P G ++A S D
Sbjct: 663 IENNNKRVNIFKGHSSNVHSVCWSP--NGELVASVSED 698
Score = 34.3 bits (75), Expect = 0.055
Identities = 27/103 (26%), Positives = 50/103 (48%)
Frame = +3
Query: 123 YYGLKLATCSSDNSVKIYDIKNGTQTLAADLKGHFGPVWQVAWAHPKYGNLLASCSYDRK 302
Y G LA+ D V I++++ T + + + H + V + P LA+ S+D+
Sbjct: 520 YDGKLLASAGHDKKVFIWNME--TLQVESTPEEHAHIITDVRF-RPN-STQLATSSFDKT 575
Query: 303 VIIWKESGEWTKLYEYTGHESSVNSVAWAPAEYGLILACCSSD 431
+ IW S L +GH + V S+ + P + L+ +C S++
Sbjct: 576 IKIWDASDPGYFLRTISGHAAPVMSIDFHPKKTELLCSCDSNN 618
>At5g25150.1 68418.m02981 transducin family protein / WD-40 repeat
family protein similar to TBP-associated factor
(GI:1732075) [Homo sapiens] and to 100 kDa subunit of
Pol II transcription factor (GI:1491718) {Homo sapiens];
contains Pfam PF00400: WD domain, G-beta repeat (6
copies)|8689032|gb|AV528749.1|AV528749
Length = 666
Score = 47.6 bits (108), Expect = 6e-06
Identities = 38/119 (31%), Positives = 61/119 (51%), Gaps = 1/119 (0%)
Frame = +3
Query: 87 GHEDMIHDAELDYYGLKLATCSSDNSVKIYDIKNGTQTLAADLKGHFGPVWQVAWAHPKY 266
GH + DA+ +G A+CS D + +I+ + + Q L + GH V W HP
Sbjct: 458 GHNYPVWDAQFSPFGHYFASCSHDRTARIWSM-DRIQPLRI-MAGHLS---DVDW-HPNC 511
Query: 267 GNLLASCSYDRKVIIWK-ESGEWTKLYEYTGHESSVNSVAWAPAEYGLILACCSSDGSI 440
N +A+ S D+ V +W ++GE ++ + GH S V S+A +P G +A DG+I
Sbjct: 512 -NYIATGSSDKTVRLWDVQTGECVRI--FIGHRSMVLSLAMSPD--GRYMASGDEDGTI 565
>At2g41500.1 68415.m05127 WD-40 repeat family protein / small
nuclear ribonucleoprotein Prp4p-related similar to U4/U6
small nuclear ribonucleoprotein hPrp4 (GP:2708305) {Homo
sapiens}; contains Pfam PF00400: WD domain, G-beta
repeat (7 copies)|19877698|gb|AU238529.1|AU238529
Length = 554
Score = 47.6 bits (108), Expect = 6e-06
Identities = 35/123 (28%), Positives = 56/123 (45%)
Frame = +3
Query: 78 IDTGHEDMIHDAELDYYGLKLATCSSDNSVKIYDIKNGTQTLAADLKGHFGPVWQVAWAH 257
+ GH ++ G A+C D+ +++D++ G L +GH PV+ V ++
Sbjct: 376 LQEGHSRSVYGIAFQQDGALAASCGLDSLARVWDLRTGRSILV--FQGHIKPVFSVNFS- 432
Query: 258 PKYGNLLASCSYDRKVIIWKESGEWTKLYEYTGHESSVNSVAWAPAEYGLILACCSSDGS 437
P G LAS D + IW + LY H + V+ V + P E G LA S D
Sbjct: 433 PN-GYHLASGGEDNQCRIW-DLRMRKSLYIIPAHANLVSQVKYEPQE-GYFLATASYDMK 489
Query: 438 ISI 446
++I
Sbjct: 490 VNI 492
Score = 44.8 bits (101), Expect = 4e-05
Identities = 34/115 (29%), Positives = 52/115 (45%)
Frame = +3
Query: 63 TVLNTIDTGHEDMIHDAELDYYGLKLATCSSDNSVKIYDIKNGTQTLAADLKGHFGPVWQ 242
T+L T + GH D + G L T S D + +++DI G + L + GH V+
Sbjct: 330 TLLQTFE-GHLDRLARVAFHPSGKYLGTTSYDKTWRLWDINTGAELLLQE--GHSRSVYG 386
Query: 243 VAWAHPKYGNLLASCSYDRKVIIWKESGEWTKLYEYTGHESSVNSVAWAPAEYGL 407
+A+ G L ASC D +W + + + GH V SV ++P Y L
Sbjct: 387 IAFQQD--GALAASCGLDSLARVW-DLRTGRSILVFQGHIKPVFSVNFSPNGYHL 438
Score = 44.4 bits (100), Expect = 5e-05
Identities = 30/98 (30%), Positives = 45/98 (45%)
Frame = +3
Query: 87 GHEDMIHDAELDYYGLKLATCSSDNSVKIYDIKNGTQTLAADLKGHFGPVWQVAWAHPKY 266
GH + G LA+ DN +I+D++ + H V QV + P+
Sbjct: 421 GHIKPVFSVNFSPNGYHLASGGEDNQCRIWDLRMRKSLYI--IPAHANLVSQVKY-EPQE 477
Query: 267 GNLLASCSYDRKVIIWKESGEWTKLYEYTGHESSVNSV 380
G LA+ SYD KV IW +++ + GHES V S+
Sbjct: 478 GYFLATASYDMKVNIW-SGRDFSLVKSLAGHESKVASL 514
>At2g19540.1 68415.m02283 transducin family protein / WD-40 repeat
family protein contains WD-40 repeats (PF00400); similar
to Glutamate-rich WD repeat protein (GRWD)
(SP:Q9BQ67)[Homo sapiens]
Length = 469
Score = 47.2 bits (107), Expect = 7e-06
Identities = 33/114 (28%), Positives = 50/114 (43%), Gaps = 2/114 (1%)
Frame = +3
Query: 195 QTLAADLKGHFGPVWQVAWAHPKYGNLLASCSYDRKVIIWKE-SGEWT-KLYEYTGHESS 368
Q + GH + + W+ G LL+ + +W+ SG W + GH +S
Sbjct: 213 QAPLVNFSGHKDEGYAIDWSPATAGRLLSG-DCKSMIHLWEPASGSWAVDPIPFAGHTAS 271
Query: 369 VNSVAWAPAEYGLILACCSSDGSISIIQYSQDTGNWDVKKITGAHAIGVNSISW 530
V + W+PAE + A CS DGS+++ + G AH VN ISW
Sbjct: 272 VEDLQWSPAEEN-VFASCSVDGSVAV--WDIRLGKSPALSFK-AHNADVNVISW 321
Score = 35.5 bits (78), Expect = 0.024
Identities = 32/107 (29%), Positives = 51/107 (47%), Gaps = 5/107 (4%)
Frame = +3
Query: 141 ATCSSDNSVKIYDIKNGTQTLAADLKGHFGPVWQVAWAHPKYGNLLASCSYD-----RKV 305
A+CS D SV ++DI+ G ++ A K H V ++W + +LAS S D R +
Sbjct: 286 ASCSVDGSVAVWDIRLG-KSPALSFKAHNADVNVISW-NRLASCMLASGSDDGTFSIRDL 343
Query: 306 IIWKESGEWTKLYEYTGHESSVNSVAWAPAEYGLILACCSSDGSISI 446
+ K +EY H+ + S+ W+ A LA S D ++I
Sbjct: 344 RLIKGGDAVVAHFEY--HKHPITSIEWS-AHEASTLAVTSGDNQLTI 387
>At1g29260.1 68414.m03578 peroxisomal targeting signal type 2
receptor (PEX7) identical to peroxisomal targeting
signal type 2 receptor (Pex7p) (GI:9502414) [Arabidopsis
thaliana]; WD-40 repeat protein family member; contains
6 WD-40 repeats (PF00400); similar to peroxismal
targeting signal 2 receptor (PTS2R) (Peroxin-7)
(PEX7)(SP:O00628) [Homo sapiens]
Length = 317
Score = 46.4 bits (105), Expect = 1e-05
Identities = 34/109 (31%), Positives = 52/109 (47%)
Frame = +3
Query: 138 LATCSSDNSVKIYDIKNGTQTLAADLKGHFGPVWQVAWAHPKYGNLLASCSYDRKVIIWK 317
LAT S D +VK++D+++ LA L GH V +V ++ P +L+ASCSYD V +W
Sbjct: 208 LATSSVDKTVKVWDVRSYRVPLAV-LNGHGYAVRKVKFS-PHRRSLIASCSYDMSVCLWD 265
Query: 318 ESGEWTKLYEYTGHESSVNSVAWAPAEYGLILACCSSDGSISIIQYSQD 464
E + Y H + + GL +A D + + Q D
Sbjct: 266 YMVEDALVGRYDHHTEFAVGIDMSVLVEGL-MASTGWDELVYVWQQGMD 313
Score = 41.9 bits (94), Expect = 3e-04
Identities = 31/111 (27%), Positives = 52/111 (46%), Gaps = 1/111 (0%)
Frame = +3
Query: 126 YGLKLATCSSDNSVKIYDIKNGTQTLAADLKGHFGPVWQVAWAHPKYGN-LLASCSYDRK 302
+G A+ S D +++I+D++ T+ + H + W KY + +LA+ S D+
Sbjct: 161 HGDVFASASGDCTLRIWDVREPGSTMI--IPAHDFEILSCDWN--KYDDCILATSSVDKT 216
Query: 303 VIIWKESGEWTKLYEYTGHESSVNSVAWAPAEYGLILACCSSDGSISIIQY 455
V +W L GH +V V ++P LI A CS D S+ + Y
Sbjct: 217 VKVWDVRSYRVPLAVLNGHGYAVRKVKFSPHRRSLI-ASCSYDMSVCLWDY 266
Score = 33.9 bits (74), Expect = 0.073
Identities = 28/101 (27%), Positives = 46/101 (45%)
Frame = +3
Query: 144 TCSSDNSVKIYDIKNGTQTLAADLKGHFGPVWQVAWAHPKYGNLLASCSYDRKVIIWKES 323
T S D++VK++ + K H V+Q W +PK+G++ AS S D + IW +
Sbjct: 124 TSSWDDTVKLWAMDRPASVRT--FKEHAYCVYQAVW-NPKHGDVFASASGDCTLRIW-DV 179
Query: 324 GEWTKLYEYTGHESSVNSVAWAPAEYGLILACCSSDGSISI 446
E H+ + S W + ILA S D ++ +
Sbjct: 180 REPGSTMIIPAHDFEILSCDWNKYD-DCILATSSVDKTVKV 219
>At3g44530.1 68416.m04786 transducin family protein / WD-40 repeat
family protein contains 6 (4 significant) WD-40 repeats
(PF0400); nuclear protein HIRA, mouse, PIR:S68141
Length = 1051
Score = 46.0 bits (104), Expect = 2e-05
Identities = 31/91 (34%), Positives = 45/91 (49%)
Frame = +3
Query: 87 GHEDMIHDAELDYYGLKLATCSSDNSVKIYDIKNGTQTLAADLKGHFGPVWQVAWAHPKY 266
GH + D LA+ S DN+V I++++ G T L+GH V V W
Sbjct: 116 GHTADVVDLNWSPDDSMLASGSLDNTVHIWNMRTGMCTTV--LRGHLSLVKGVTW--DPI 171
Query: 267 GNLLASCSYDRKVIIWKESGEWTKLYEYTGH 359
G+ +AS S D+ VIIW+ S +W + GH
Sbjct: 172 GSFIASQSDDKTVIIWRTS-DWGMAHRTDGH 201
Score = 34.3 bits (75), Expect = 0.055
Identities = 45/168 (26%), Positives = 71/168 (42%), Gaps = 19/168 (11%)
Frame = +3
Query: 90 HEDM-IHDAELDYYGLKLATCSSDNSVKIYDIKN--GTQTLAADLKGHFGPVWQVAWAHP 260
HE + I ++ G + AT D+ D++N + L A L+ HFG V V WA
Sbjct: 11 HEGLQIFSIDVQPNGERFATGGGDHKSVDKDLQNIDTKERLLATLRDHFGSVNCVRWA-- 68
Query: 261 KYGNLLASCSYDRKVIIWKE----------SGE------WTKLYEYTGHESSVNSVAWAP 392
K +AS S D+ + I + SGE W + GH + V + W+P
Sbjct: 69 KNSRYVASGSDDQVIQIHERKPGSGTTEFGSGEAPDVENWKAVMTLRGHTADVVDLNWSP 128
Query: 393 AEYGLILACCSSDGSISIIQYSQDTGNWDVKKITGAHAIGVNSISWCP 536
+ +LA S D ++ I ++ TG + H V ++W P
Sbjct: 129 DD--SMLASGSLDNTVHI--WNMRTGM--CTTVLRGHLSLVKGVTWDP 170
Score = 33.5 bits (73), Expect = 0.096
Identities = 17/62 (27%), Positives = 29/62 (46%)
Frame = +3
Query: 270 NLLASCSYDRKVIIWKESGEWTKLYEYTGHESSVNSVAWAPAEYGLILACCSSDGSISII 449
N++A S DR + +W SV ++W+P Y L CS DG++++I
Sbjct: 298 NVIAMGSQDRTITVWTTGSARPLFVAKHFFGQSVVDLSWSPDGYSLF--ACSLDGTVAMI 355
Query: 450 QY 455
+
Sbjct: 356 HF 357
>At4g02730.1 68417.m00372 transducin family protein / WD-40 repeat
family protein similar to C. elegans putative WD-repeat
protein C14B1.4 (SP:Q17963)
Length = 333
Score = 45.2 bits (102), Expect = 3e-05
Identities = 23/73 (31%), Positives = 42/73 (57%)
Frame = +3
Query: 213 LKGHFGPVWQVAWAHPKYGNLLASCSYDRKVIIWKESGEWTKLYEYTGHESSVNSVAWAP 392
L+GH + V +++ GNLLAS S D+ +I+W + ++ ++ Y GH S ++ +AW+
Sbjct: 39 LEGHTAAISCVKFSND--GNLLASASVDKTMILWSAT-NYSLIHRYEGHSSGISDLAWSS 95
Query: 393 AEYGLILACCSSD 431
+ C +SD
Sbjct: 96 DSH---YTCSASD 105
Score = 38.7 bits (86), Expect = 0.003
Identities = 33/128 (25%), Positives = 60/128 (46%), Gaps = 1/128 (0%)
Frame = +3
Query: 87 GHEDMIHDAELDYYGLKLATCSSDNSVKIYDIKNGTQTLAADLKGHFGPVWQVAWAHPKY 266
GH I D + S D +++I+D ++ + L L+GH V+ V + P
Sbjct: 83 GHSSGISDLAWSSDSHYTCSASDDCTLRIWDARSPYECLKV-LRGHTNFVFCVNFNPPS- 140
Query: 267 GNLLASCSYDRKVIIWK-ESGEWTKLYEYTGHESSVNSVAWAPAEYGLILACCSSDGSIS 443
NL+ S S+D + IW+ ++G+ ++ + H ++SV + G ++ S DGS
Sbjct: 141 -NLIVSGSFDETIRIWEVKTGKCVRMIK--AHSMPISSVHF--NRDGSLIVSASHDGSCK 195
Query: 444 IIQYSQDT 467
I + T
Sbjct: 196 IWDAKEGT 203
>At2g16405.1 68415.m01878 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to WD-repeat protein 13 (SP:Q9H1Z4) [Homo
sapiens]
Length = 482
Score = 45.2 bits (102), Expect = 3e-05
Identities = 24/58 (41%), Positives = 32/58 (55%)
Frame = +3
Query: 150 SSDNSVKIYDIKNGTQTLAADLKGHFGPVWQVAWAHPKYGNLLASCSYDRKVIIWKES 323
S D++V YD+ T L+GH PV VAW H + NLLAS + VI+WK +
Sbjct: 423 SEDSNVYFYDLTKPKHTCVNKLQGHRFPVMCVAWNHGE--NLLASSDFYGVVIVWKRA 478
>At4g29730.1 68417.m04233 WD-40 repeat family protein contains 5
WD-40 repeats (PF0400); similar to WD-40 repeat protein
MSI4 (SP:O22607) [Arabidopsis thaliana]
Length = 496
Score = 44.8 bits (101), Expect = 4e-05
Identities = 31/129 (24%), Positives = 59/129 (45%), Gaps = 6/129 (4%)
Frame = +3
Query: 78 IDTGHEDMIHD-AELDYYGLKLATCSSDNSVKIYDIKNGTQTLAADLKGHFGPVWQVAWA 254
I GH+D + D A + + D+ + ++D + GT K H + V W
Sbjct: 276 IYNGHKDTVEDVAFCPSSAQEFCSVGDDSCLMLWDARTGTSPAMKVEKAHDADLHCVDW- 334
Query: 255 HPKYGNLLASCSYDRKVIIWKE-----SGEWTKLYEYTGHESSVNSVAWAPAEYGLILAC 419
+P NL+ + S D V ++ +G + +Y++ GH ++V V W+P + +
Sbjct: 335 NPHDNNLILTGSADNTVRVFDRRNLTSNGVGSPVYKFEGHRAAVLCVQWSP-DKSSVFGS 393
Query: 420 CSSDGSISI 446
+ DG ++I
Sbjct: 394 SAEDGLLNI 402
>At2g47410.1 68415.m05917 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to WDR protein, form B (GI:14970593) [Mus
musculus]
Length = 1589
Score = 44.8 bits (101), Expect = 4e-05
Identities = 36/128 (28%), Positives = 62/128 (48%), Gaps = 3/128 (2%)
Frame = +3
Query: 87 GHEDMIHDAELDYYGLKLATCSSDNSVKIYDIKNGTQTLAADLKGHFGPVWQVAWAHPKY 266
GH + ++ A D G + T S D VKI+ ++ T A +GH G + +A +
Sbjct: 303 GHRNAVYCAIFDRSGRYVITGSDDRLVKIWSME--TALCLASCRGHEGDITDLAVS--SN 358
Query: 267 GNLLASCSYDRKVIIWKESGEWTKLYEYTGHESSVNSVAWAPAEYGLI-LACCSSDGSIS 443
L+AS S D + +W+ + + GH +V ++A++P + + L S DG+
Sbjct: 359 NALVASASNDFVIRVWR-LPDGMPISVLRGHTGAVTAIAFSPRQASVYQLLSSSDDGTCR 417
Query: 444 I--IQYSQ 461
I +YSQ
Sbjct: 418 IWDARYSQ 425
>At1g61210.1 68414.m06897 WD-40 repeat family protein / katanin p80
subunit, putative contains 5 WD-40 repeats (PF00400);
similar to katanin p80 subunit (GI:3005601)
[Strongylocentrotus purpuratus]
Length = 1180
Score = 44.8 bits (101), Expect = 4e-05
Identities = 41/151 (27%), Positives = 68/151 (45%)
Frame = +3
Query: 84 TGHEDMIHDAELDYYGLKLATCSSDNSVKIYDIKNGTQTLAADLKGHFGPVWQVAWAHPK 263
TGH E +G LA+ SSD ++KI+DI+ + KGH + + +
Sbjct: 97 TGHRSNCSAVEFHPFGEFLASGSSDANLKIWDIRK--KGCIQTYKGHSRGISTIRFTPD- 153
Query: 264 YGNLLASCSYDRKVIIWKESGEWTKLYEYTGHESSVNSVAWAPAEYGLILACCSSDGSIS 443
G + S D V +W + L+E+ HE + S+ + P E+ +LA S+D ++
Sbjct: 154 -GRWVVSGGLDNVVKVW-DLTAGKLLHEFKFHEGPIRSLDFHPLEF--LLATGSADRTVK 209
Query: 444 IIQYSQDTGNWDVKKITGAHAIGVNSISWCP 536
D +++ T A GV SI + P
Sbjct: 210 F----WDLETFELIGSTRPEATGVRSIKFHP 236
Score = 31.9 bits (69), Expect = 0.29
Identities = 23/56 (41%), Positives = 30/56 (53%)
Frame = +3
Query: 261 KYGNLLASCSYDRKVIIWKESGEWTKLYEYTGHESSVNSVAWAPAEYGLILACCSS 428
K L + D KV +W G+ T L GH S+V+SVA+ AE L+LA SS
Sbjct: 26 KTSRLFITGGDDYKVNLWA-IGKPTSLMSLCGHTSAVDSVAFDSAEV-LVLAGASS 79
>At5g08560.1 68418.m01018 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to will die slowly protein (WDS) (SP:Q9V3J8)
[Drosophila melanogaster]
Length = 589
Score = 44.4 bits (100), Expect = 5e-05
Identities = 39/143 (27%), Positives = 64/143 (44%), Gaps = 2/143 (1%)
Frame = +3
Query: 93 EDMIHDAELDYYGLKLATCSSDNSVKIYDIKNGTQTLAADLKGHFGPVWQVAWAHPKYGN 272
EDMI L + + +++++I+ G + + KGH + + Y
Sbjct: 443 EDMITSFSLSNDNKYILVNLLNQEIRLWNIE-GDPKIVSRYKGHKRSRFIIRSCFGGYKQ 501
Query: 273 -LLASCSYDRKVIIWKESGEWTKLYEYTGHESSVNSVAWAPAEYGLILACCSSDGSISII 449
+AS S D +V IW S + E GH +VN V+W+P + LA S DG+I I
Sbjct: 502 AFIASGSEDSQVYIWHRS-TGKLIVELPGHAGAVNCVSWSPTNLHM-LASASDDGTIRIW 559
Query: 450 QYSQ-DTGNWDVKKITGAHAIGV 515
+ + N K + G+ + GV
Sbjct: 560 GLDRINQQNQKKKLVQGSSSNGV 582
Score = 38.3 bits (85), Expect = 0.003
Identities = 23/71 (32%), Positives = 36/71 (50%), Gaps = 2/71 (2%)
Frame = +3
Query: 213 LKGHFGPVWQVAWAHPKYGNLLASCSYDRKVIIWKES--GEWTKLYEYTGHESSVNSVAW 386
L+ H VW + ++H G LAS S D+ IIW+ S G + + GH V ++ W
Sbjct: 270 LESHTDEVWFLQFSHN--GKYLASSSKDQTAIIWEISADGHISLKHTLVGHHKPVIAILW 327
Query: 387 APAEYGLILAC 419
+P + +L C
Sbjct: 328 SPDD-RQVLTC 337
Score = 27.1 bits (57), Expect = 8.3
Identities = 20/81 (24%), Positives = 36/81 (44%)
Frame = +3
Query: 294 DRKVIIWKESGEWTKLYEYTGHESSVNSVAWAPAEYGLILACCSSDGSISIIQYSQDTGN 473
++++ +W G+ + Y GH+ S + Y S+ S + + + TG
Sbjct: 464 NQEIRLWNIEGDPKIVSRYKGHKRSRFIIRSCFGGYKQAFIASGSEDS-QVYIWHRSTGK 522
Query: 474 WDVKKITGAHAIGVNSISWCP 536
V+ + G HA VN +SW P
Sbjct: 523 LIVE-LPG-HAGAVNCVSWSP 541
>At3g16830.1 68416.m02149 WD-40 repeat family protein contains 10
WD-40 repeats (PF00400) (1 weak)
Length = 1131
Score = 44.0 bits (99), Expect = 7e-05
Identities = 27/109 (24%), Positives = 48/109 (44%)
Frame = +3
Query: 129 GLKLATCSSDNSVKIYDIKNGTQTLAADLKGHFGPVWQVAWAHPKYGNLLASCSYDRKVI 308
G L + + + +Y + ++ H G V +A+AHP + +C D+ +
Sbjct: 421 GNLLGVSFTKHLIHVYAYQGSDLRQHLEIDAHVGCVNDLAFAHPNKQMCVVTCGDDKLIK 480
Query: 309 IWKESGEWTKLYEYTGHESSVNSVAWAPAEYGLILACCSSDGSISIIQY 455
+W SG+ KL+ + GHE+ V S+ E + + DG I Y
Sbjct: 481 VWDLSGK--KLFTFEGHEAPVYSICPHQKENIQFIFSTALDGKIKAWLY 527
>At1g71840.1 68414.m08302 transducin family protein / WD-40 repeat
family protein contains Pfam profile:PF00560 Leucine
Rich Repeat (4 copies); Pfam profile:PF00069 Eukaryotic
protein kinase domain; Pfam profile:PF00400 WD domain,
G-beta repeat (7 copies)
Length = 407
Score = 44.0 bits (99), Expect = 7e-05
Identities = 35/120 (29%), Positives = 56/120 (46%)
Frame = +3
Query: 87 GHEDMIHDAELDYYGLKLATCSSDNSVKIYDIKNGTQTLAADLKGHFGPVWQVAWAHPKY 266
GH+D + Y G LA+ D V+I+D +GT D G G W V W HP+
Sbjct: 111 GHKDSVSCLAFSYDGQLLASGGLDGVVQIFDASSGTLKCVLDGPG-AGIEW-VRW-HPR- 166
Query: 267 GNLLASCSYDRKVIIWKESGEWTKLYEYTGHESSVNSVAWAPAEYGLILACCSSDGSISI 446
G+++ + S D + +W E L ++GH +V + P G ++ S D S+ +
Sbjct: 167 GHIVLAGSEDCSLWMWNADKE-AYLNMFSGHNLNVTCGDFTPD--GKLICTGSDDASLIV 223
Score = 30.3 bits (65), Expect = 0.89
Identities = 29/101 (28%), Positives = 43/101 (42%), Gaps = 2/101 (1%)
Frame = +3
Query: 150 SSDNSVKIYDIKNGTQTLAADLKGHFGPVWQVAWAHPKYGN--LLASCSYDRKVIIWKES 323
S D SV I +I G + + L H V V ++ P L A+ D+K+IIW
Sbjct: 261 SKDGSVHIVNIVTGK--VVSSLNSHTDSVECVKFS-PSSATIPLAATGGMDKKLIIWDLQ 317
Query: 324 GEWTKLYEYTGHESSVNSVAWAPAEYGLILACCSSDGSISI 446
+ HE V S+ W L C ++G++SI
Sbjct: 318 HSTPRFI--CEHEEGVTSLTWIGTSKYLATGC--ANGTVSI 354
>At5g24520.3 68418.m02893 transparent testa glabra 1 protein (TTG1)
identical to transparent testa glabra 1 (Ttg1) protein
(GI:10177852) {Arabidopsis thaliana}; contains Pfam
PF00400: WD domain, G-beta repeat (4 copies,1 weak);
Length = 341
Score = 43.6 bits (98), Expect = 9e-05
Identities = 36/155 (23%), Positives = 68/155 (43%), Gaps = 1/155 (0%)
Frame = +3
Query: 63 TVLNTIDTGHEDMIHDAELDYYGLKLATCSSDNSVKIYDIKNGTQ-TLAADLKGHFGPVW 239
+V+ T H+ +HD + A+ S+D SV+I+D+++ T+ + P+
Sbjct: 165 SVVETQLIAHDKEVHDIAWGEARV-FASVSADGSVRIFDLRDKEHSTIIYESPQPDTPLL 223
Query: 240 QVAWAHPKYGNLLASCSYDRKVIIWKESGEWTKLYEYTGHESSVNSVAWAPAEYGLILAC 419
++AW + KV+I + E H++SVN++AWAP I C
Sbjct: 224 RLAWNKQDLRYMATILMDSNKVVILDIRSPTMPVAELERHQASVNAIAWAPQSCKHI--C 281
Query: 420 CSSDGSISIIQYSQDTGNWDVKKITGAHAIGVNSI 524
D + ++I W++ + G + I S+
Sbjct: 282 SGGDDTQALI--------WELPTVAGPNGIDPMSV 308
Score = 39.5 bits (88), Expect = 0.001
Identities = 33/136 (24%), Positives = 57/136 (41%), Gaps = 2/136 (1%)
Frame = +3
Query: 135 KLATCSSDNSVKIYDIKNGTQTLAADLKGHFGPVWQVAWAHPKYGNLLASCSYDRKVIIW 314
+L TCS D + I+DI+ + L H V +AW + + AS S D V I+
Sbjct: 147 RLGTCSIDTTCTIWDIEK--SVVETQLIAHDKEVHDIAWGEAR---VFASVSADGSVRIF 201
Query: 315 --KESGEWTKLYEYTGHESSVNSVAWAPAEYGLILACCSSDGSISIIQYSQDTGNWDVKK 488
++ T +YE ++ + +AW + + + I+ T V +
Sbjct: 202 DLRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILMDSNKVVILDIRSPT--MPVAE 259
Query: 489 ITGAHAIGVNSISWCP 536
+ H VN+I+W P
Sbjct: 260 LE-RHQASVNAIAWAP 274
>At5g24520.2 68418.m02892 transparent testa glabra 1 protein (TTG1)
identical to transparent testa glabra 1 (Ttg1) protein
(GI:10177852) {Arabidopsis thaliana}; contains Pfam
PF00400: WD domain, G-beta repeat (4 copies,1 weak);
Length = 341
Score = 43.6 bits (98), Expect = 9e-05
Identities = 36/155 (23%), Positives = 68/155 (43%), Gaps = 1/155 (0%)
Frame = +3
Query: 63 TVLNTIDTGHEDMIHDAELDYYGLKLATCSSDNSVKIYDIKNGTQ-TLAADLKGHFGPVW 239
+V+ T H+ +HD + A+ S+D SV+I+D+++ T+ + P+
Sbjct: 165 SVVETQLIAHDKEVHDIAWGEARV-FASVSADGSVRIFDLRDKEHSTIIYESPQPDTPLL 223
Query: 240 QVAWAHPKYGNLLASCSYDRKVIIWKESGEWTKLYEYTGHESSVNSVAWAPAEYGLILAC 419
++AW + KV+I + E H++SVN++AWAP I C
Sbjct: 224 RLAWNKQDLRYMATILMDSNKVVILDIRSPTMPVAELERHQASVNAIAWAPQSCKHI--C 281
Query: 420 CSSDGSISIIQYSQDTGNWDVKKITGAHAIGVNSI 524
D + ++I W++ + G + I S+
Sbjct: 282 SGGDDTQALI--------WELPTVAGPNGIDPMSV 308
Score = 39.5 bits (88), Expect = 0.001
Identities = 33/136 (24%), Positives = 57/136 (41%), Gaps = 2/136 (1%)
Frame = +3
Query: 135 KLATCSSDNSVKIYDIKNGTQTLAADLKGHFGPVWQVAWAHPKYGNLLASCSYDRKVIIW 314
+L TCS D + I+DI+ + L H V +AW + + AS S D V I+
Sbjct: 147 RLGTCSIDTTCTIWDIEK--SVVETQLIAHDKEVHDIAWGEAR---VFASVSADGSVRIF 201
Query: 315 --KESGEWTKLYEYTGHESSVNSVAWAPAEYGLILACCSSDGSISIIQYSQDTGNWDVKK 488
++ T +YE ++ + +AW + + + I+ T V +
Sbjct: 202 DLRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILMDSNKVVILDIRSPT--MPVAE 259
Query: 489 ITGAHAIGVNSISWCP 536
+ H VN+I+W P
Sbjct: 260 LE-RHQASVNAIAWAP 274
>At5g24520.1 68418.m02891 transparent testa glabra 1 protein (TTG1)
identical to transparent testa glabra 1 (Ttg1) protein
(GI:10177852) {Arabidopsis thaliana}; contains Pfam
PF00400: WD domain, G-beta repeat (4 copies,1 weak);
Length = 341
Score = 43.6 bits (98), Expect = 9e-05
Identities = 36/155 (23%), Positives = 68/155 (43%), Gaps = 1/155 (0%)
Frame = +3
Query: 63 TVLNTIDTGHEDMIHDAELDYYGLKLATCSSDNSVKIYDIKNGTQ-TLAADLKGHFGPVW 239
+V+ T H+ +HD + A+ S+D SV+I+D+++ T+ + P+
Sbjct: 165 SVVETQLIAHDKEVHDIAWGEARV-FASVSADGSVRIFDLRDKEHSTIIYESPQPDTPLL 223
Query: 240 QVAWAHPKYGNLLASCSYDRKVIIWKESGEWTKLYEYTGHESSVNSVAWAPAEYGLILAC 419
++AW + KV+I + E H++SVN++AWAP I C
Sbjct: 224 RLAWNKQDLRYMATILMDSNKVVILDIRSPTMPVAELERHQASVNAIAWAPQSCKHI--C 281
Query: 420 CSSDGSISIIQYSQDTGNWDVKKITGAHAIGVNSI 524
D + ++I W++ + G + I S+
Sbjct: 282 SGGDDTQALI--------WELPTVAGPNGIDPMSV 308
Score = 39.5 bits (88), Expect = 0.001
Identities = 33/136 (24%), Positives = 57/136 (41%), Gaps = 2/136 (1%)
Frame = +3
Query: 135 KLATCSSDNSVKIYDIKNGTQTLAADLKGHFGPVWQVAWAHPKYGNLLASCSYDRKVIIW 314
+L TCS D + I+DI+ + L H V +AW + + AS S D V I+
Sbjct: 147 RLGTCSIDTTCTIWDIEK--SVVETQLIAHDKEVHDIAWGEAR---VFASVSADGSVRIF 201
Query: 315 --KESGEWTKLYEYTGHESSVNSVAWAPAEYGLILACCSSDGSISIIQYSQDTGNWDVKK 488
++ T +YE ++ + +AW + + + I+ T V +
Sbjct: 202 DLRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILMDSNKVVILDIRSPT--MPVAE 259
Query: 489 ITGAHAIGVNSISWCP 536
+ H VN+I+W P
Sbjct: 260 LE-RHQASVNAIAWAP 274
>At2g31300.1 68415.m03821 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
identical to putative ARP2/3 protein complex subunit p41
(GI:4432825)[Arabidopsis thaliana]; similar to ARP2/3
complex 41 kDa subunit (P41-ARC) (Actin-related protein
2/3 complex subunit 1B) (SP:Q9WV32) [Mus musculus]
Length = 378
Score = 43.6 bits (98), Expect = 9e-05
Identities = 33/135 (24%), Positives = 52/135 (38%), Gaps = 2/135 (1%)
Frame = +3
Query: 138 LATCSSDNSVKIY-DIKNGTQTLAADLKGHFGPVWQVAWAHPKYGNLLASCSYDRKVIIW 314
+A C ++ V IY + L+ H V + W+ N + + S+DR +W
Sbjct: 25 VALCPNNTEVHIYKSLSQDHWERLHVLQKHDQIVSGIDWSSKS--NKIVTVSHDRNSYVW 82
Query: 315 K-ESGEWTKLYEYTGHESSVNSVAWAPAEYGLILACCSSDGSISIIQYSQDTGNWDVKKI 491
E EW + V W+P E + S ++ I Y Q+ W K I
Sbjct: 83 SLEGAEWVPTLVILRLNRAALCVQWSPKENKFAVG--SGAKTVCICYYEQENNWWVSKLI 140
Query: 492 TGAHAIGVNSISWCP 536
H V S++W P
Sbjct: 141 RKRHESSVTSVAWHP 155
Score = 31.9 bits (69), Expect = 0.29
Identities = 17/44 (38%), Positives = 23/44 (52%)
Frame = +3
Query: 315 KESGEWTKLYEYTGHESSVNSVAWAPAEYGLILACCSSDGSISI 446
+E+ W HESSV SVAW P ++LA S+DG +
Sbjct: 130 QENNWWVSKLIRKRHESSVTSVAWHP--NNVLLATTSTDGKCRV 171
>At2g30910.2 68415.m03768 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400) (1
weak); similar to ARP2/3 complex 41 kDa subunit
(P41-ARC) (Actin-related protein 2/3 complex subunit 1B)
(SP:O88656) [Rattus norvegicus]
Length = 378
Score = 43.6 bits (98), Expect = 9e-05
Identities = 33/135 (24%), Positives = 52/135 (38%), Gaps = 2/135 (1%)
Frame = +3
Query: 138 LATCSSDNSVKIY-DIKNGTQTLAADLKGHFGPVWQVAWAHPKYGNLLASCSYDRKVIIW 314
+A C ++ V IY + L+ H V + W+ N + + S+DR +W
Sbjct: 25 VALCPNNTEVHIYKSLSQDHWERLHVLQKHDQIVSGIDWSSKS--NKIVTVSHDRNSYVW 82
Query: 315 K-ESGEWTKLYEYTGHESSVNSVAWAPAEYGLILACCSSDGSISIIQYSQDTGNWDVKKI 491
E EW + V W+P E + S ++ I Y Q+ W K I
Sbjct: 83 SLEGAEWVPTLVILRLNRAALCVQWSPKENKFAVG--SGAKTVCICYYEQENNWWVSKLI 140
Query: 492 TGAHAIGVNSISWCP 536
H V S++W P
Sbjct: 141 RKRHESSVTSVAWHP 155
Score = 31.9 bits (69), Expect = 0.29
Identities = 17/44 (38%), Positives = 23/44 (52%)
Frame = +3
Query: 315 KESGEWTKLYEYTGHESSVNSVAWAPAEYGLILACCSSDGSISI 446
+E+ W HESSV SVAW P ++LA S+DG +
Sbjct: 130 QENNWWVSKLIRKRHESSVTSVAWHP--NNVLLATTSTDGKCRV 171
>At2g30910.1 68415.m03767 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400) (1
weak); similar to ARP2/3 complex 41 kDa subunit
(P41-ARC) (Actin-related protein 2/3 complex subunit 1B)
(SP:O88656) [Rattus norvegicus]
Length = 378
Score = 43.6 bits (98), Expect = 9e-05
Identities = 33/135 (24%), Positives = 52/135 (38%), Gaps = 2/135 (1%)
Frame = +3
Query: 138 LATCSSDNSVKIY-DIKNGTQTLAADLKGHFGPVWQVAWAHPKYGNLLASCSYDRKVIIW 314
+A C ++ V IY + L+ H V + W+ N + + S+DR +W
Sbjct: 25 VALCPNNTEVHIYKSLSQDHWERLHVLQKHDQIVSGIDWSSKS--NKIVTVSHDRNSYVW 82
Query: 315 K-ESGEWTKLYEYTGHESSVNSVAWAPAEYGLILACCSSDGSISIIQYSQDTGNWDVKKI 491
E EW + V W+P E + S ++ I Y Q+ W K I
Sbjct: 83 SLEGAEWVPTLVILRLNRAALCVQWSPKENKFAVG--SGAKTVCICYYEQENNWWVSKLI 140
Query: 492 TGAHAIGVNSISWCP 536
H V S++W P
Sbjct: 141 RKRHESSVTSVAWHP 155
Score = 31.9 bits (69), Expect = 0.29
Identities = 17/44 (38%), Positives = 23/44 (52%)
Frame = +3
Query: 315 KESGEWTKLYEYTGHESSVNSVAWAPAEYGLILACCSSDGSISI 446
+E+ W HESSV SVAW P ++LA S+DG +
Sbjct: 130 QENNWWVSKLIRKRHESSVTSVAWHP--NNVLLATTSTDGKCRV 171
>At3g18060.1 68416.m02297 transducin family protein / WD-40 repeat
family protein similar to 66 kDa stress protein
(SP:P90587) [Physarum polycephalum (Slime mold)];
similar to WDR1 protein GB:AAD05042 [Gallus gallus]
(Genomics 56 (1), 59-69 (1999)); contains 11 WD-40
repeats (PF00400)
Length = 609
Score = 43.2 bits (97), Expect = 1e-04
Identities = 33/134 (24%), Positives = 57/134 (42%)
Frame = +3
Query: 129 GLKLATCSSDNSVKIYDIKNGTQTLAADLKGHFGPVWQVAWAHPKYGNLLASCSYDRKVI 308
G + D + +Y I + T A L+ H G + + ++ P ++ AS +R+ +
Sbjct: 459 GTEAVIGGQDGKLHLYSINGDSLTEEAVLERHRGAISVIRYS-PDL-SMFASADLNREAV 516
Query: 309 IWKESGEWTKLYEYTGHESSVNSVAWAPAEYGLILACCSSDGSISIIQYSQDTGNWDVKK 488
+W KL H + +N +AW+P ++A S D +I Y D
Sbjct: 517 VWDRVSREMKLKNMLYHSARINCLAWSP--NSTMVATGSLD--TCVIVYEVDKPASSRMT 572
Query: 489 ITGAHAIGVNSISW 530
I GAH GV + +
Sbjct: 573 IKGAHLGGVYGLGF 586
Score = 36.3 bits (80), Expect = 0.014
Identities = 34/123 (27%), Positives = 56/123 (45%), Gaps = 3/123 (2%)
Frame = +3
Query: 81 DTGHEDMIHDAELDYYGLKLATCSSDNSVKIYDIK-NGTQTLAADLK--GHFGPVWQVAW 251
D GH+ I+ G ++ T S+D S KI+DI NG+ +L L G G V +
Sbjct: 228 DDGHKGSIYAVSWSPDGKQVLTVSADKSAKIWDISDNGSGSLNTTLNCPGSSGGVDDMLV 287
Query: 252 AHPKYGNLLASCSYDRKVIIWKESGEWTKLYEYTGHESSVNSVAWAPAEYGLILACCSSD 431
+ + + S + I+ S ++++GH +V+S+A IL+ S D
Sbjct: 288 GCLWQNDHIVTVSLGGTISIFSASDLDKSPFQFSGHMKNVSSLAVLKGNADYILS-GSYD 346
Query: 432 GSI 440
G I
Sbjct: 347 GLI 349
>At2g43770.1 68415.m05441 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to U5 snRNP-specific 40 kDa protein (GI:3820594)
[Homo sapiens]
Length = 343
Score = 43.2 bits (97), Expect = 1e-04
Identities = 38/124 (30%), Positives = 58/124 (46%), Gaps = 6/124 (4%)
Frame = +3
Query: 87 GHEDMIHDAELDYYGLKLATCSSDNSVKIYDIK-NGTQTLAADL-KGH---FGP-VWQVA 248
GH+D I L G L T DN + ++D++ Q + +GH F + + +
Sbjct: 220 GHQDTITGMSLSPDGSYLLTNGMDNKLCVWDMRPYAPQNRCVKIFEGHQHNFEKNLLKCS 279
Query: 249 WAHPKYGNLLASCSYDRKVIIWKESGEWTKLYEYTGHESSVNSVAWAPAEYGLILACCSS 428
W+ G + + S DR V IW + T +Y+ GH SVN + P E I+ CSS
Sbjct: 280 WSPD--GTKVTAGSSDRMVHIWDTTSRRT-IYKLPGHTGSVNECVFHPTE--PIIGSCSS 334
Query: 429 DGSI 440
D +I
Sbjct: 335 DKNI 338
Score = 41.5 bits (93), Expect = 4e-04
Identities = 35/121 (28%), Positives = 60/121 (49%), Gaps = 3/121 (2%)
Frame = +3
Query: 183 KNGTQTLAAD---LKGHFGPVWQVAWAHPKYGNLLASCSYDRKVIIWKESGEWTKLYEYT 353
KN T +L A L GH V+ + + +P G L+AS S+DR++ +W+ G+
Sbjct: 36 KNRTSSLEAPIMLLSGHPSAVYTMKF-NPA-GTLIASGSHDREIFLWRVHGDCKNFMVLK 93
Query: 354 GHESSVNSVAWAPAEYGLILACCSSDGSISIIQYSQDTGNWDVKKITGAHAIGVNSISWC 533
GH++++ + W G + S D ++ + +TG +KK+ H+ VNS C
Sbjct: 94 GHKNAILDLHW--TSDGSQIVSASPDKTVR--AWDVETGK-QIKKM-AEHSSFVNSC--C 145
Query: 534 P 536
P
Sbjct: 146 P 146
Score = 33.5 bits (73), Expect = 0.096
Identities = 28/111 (25%), Positives = 51/111 (45%), Gaps = 7/111 (6%)
Frame = +3
Query: 135 KLATCSSDNSVKIYDIKNGTQTLAADLKGHFGPVWQVAWAHPKYGNLLASCSYDRKVIIW 314
K+ T DN VK++D++ G T+ L+GH + ++ + G+ L + D K+ +W
Sbjct: 194 KIFTGGVDNDVKVWDLRKGEATMT--LEGHQDTITGMSLSPD--GSYLLTNGMDNKLCVW 249
Query: 315 -----KESGEWTKLYEYTGH--ESSVNSVAWAPAEYGLILACCSSDGSISI 446
K++E H E ++ +W+P G + SSD + I
Sbjct: 250 DMRPYAPQNRCVKIFEGHQHNFEKNLLKCSWSPD--GTKVTAGSSDRMVHI 298
>At4g11920.1 68417.m01895 WD-40 repeat family protein contains 6 WD
repeats (PF00400); similar to Fzr1 (GI:6463679) {Homo
sapiens}; similar to WD repeat protein Srw1
-Schizosaccharomyces pombe,PID:d1023012
Length = 475
Score = 42.7 bits (96), Expect = 2e-04
Identities = 25/91 (27%), Positives = 45/91 (49%)
Frame = +3
Query: 138 LATCSSDNSVKIYDIKNGTQTLAADLKGHFGPVWQVAWAHPKYGNLLASCSYDRKVIIWK 317
L++ S D S+ DI+ + + LKGH + + W+ LAS D K+ +W
Sbjct: 264 LSSGSRDKSILQRDIRT-QEDHVSKLKGHKSEICGLKWSSDN--RELASGGNDNKLFVWN 320
Query: 318 ESGEWTKLYEYTGHESSVNSVAWAPAEYGLI 410
+ L + H ++V ++AW+P +GL+
Sbjct: 321 QHSTQPVL-RFCEHAAAVKAIAWSPHHFGLL 350
>At1g64350.1 68414.m07292 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to nuclear pore protein SEH1 (SP:P53011)
[Saccharomyces cerevisiae]
Length = 326
Score = 42.7 bits (96), Expect = 2e-04
Identities = 23/64 (35%), Positives = 36/64 (56%), Gaps = 4/64 (6%)
Frame = +3
Query: 267 GNLLASCSYDRKVIIWKESGEWTKLYEYTGH----ESSVNSVAWAPAEYGLILACCSSDG 434
G+ LA+ S + K+ I++ S + + T ESS+ + W P+EYG +AC DG
Sbjct: 21 GDRLAAGSLNGKLSIYESSTSSSSTFSCTSKVRVSESSIVKIVWLPSEYGDAVACVCEDG 80
Query: 435 SISI 446
S+SI
Sbjct: 81 SLSI 84
Score = 34.3 bits (75), Expect = 0.055
Identities = 18/44 (40%), Positives = 23/44 (52%), Gaps = 2/44 (4%)
Frame = +3
Query: 207 ADLKGHFGPVWQVAWAHPKYGNLLASCSYDRKVIIWKE--SGEW 332
+ L GH G VWQ+ W G LAS D V +W+ +GEW
Sbjct: 274 SSLSGHQGEVWQMEW--DMSGMTLASTGSDGMVKLWQSNLNGEW 315
Score = 31.9 bits (69), Expect = 0.29
Identities = 26/130 (20%), Positives = 52/130 (40%), Gaps = 11/130 (8%)
Frame = +3
Query: 129 GLKLATCSSDNSVKIYDIK---NGTQTLAADLKGHFGPVWQVAWAHPKYGNLLASCSYDR 299
G +LA S + + IY+ + T + + ++ + ++ W +YG+ +A D
Sbjct: 21 GDRLAAGSLNGKLSIYESSTSSSSTFSCTSKVRVSESSIVKIVWLPSEYGDAVACVCEDG 80
Query: 300 KVIIWKESG------EWTKLYEYTGHESSVNSVAWAPAEYGLILACCSSDGSISIIQYSQ 461
+ IW+E EW S V V + + L + SDG + + +
Sbjct: 81 SLSIWEELSEDAHGLEWKLCKSMKNKSSQVLDVQFGVSRKSLKMVAAYSDGYLRVFELLN 140
Query: 462 --DTGNWDVK 485
+ NW ++
Sbjct: 141 PLELKNWQLQ 150
>At3g21540.1 68416.m02717 transducin family protein / WD-40 repeat
family protein contains Pfam profile: PF00400 WD domain,
G-beta repeat (10 copies); similar to WD-repeat protein
3 (SP:Q9UNX4) [Homo sapiens]
Length = 955
Score = 42.3 bits (95), Expect = 2e-04
Identities = 25/78 (32%), Positives = 40/78 (51%)
Frame = +3
Query: 153 SDNSVKIYDIKNGTQTLAADLKGHFGPVWQVAWAHPKYGNLLASCSYDRKVIIWKESGEW 332
+D S++I+D + GT + H G V A + K G++LAS S D +I+W GE
Sbjct: 84 ADGSIRIWDTEKGT--CEVNFNSHKGAV--TALRYNKVGSMLASGSKDNDIILWDVVGE- 138
Query: 333 TKLYEYTGHESSVNSVAW 386
+ L+ GH V + +
Sbjct: 139 SGLFRLRGHRDQVTDLVF 156
>At4g32551.1 68417.m04633 WD-40 repeat family protein (LEUNIG)
contains seven G-protein beta WD-40 repeats; beta
transducin-like protein, Podospora anserina, gb:L28125;
contains Pfam profiles PF04503: Single-stranded DNA
binding protein, SSDP; PF00400:WD domain, G-beta repeat;
identical to cDNA LEUNIG (LEUNIG) GI:11141604
Length = 931
Score = 41.9 bits (94), Expect = 3e-04
Identities = 33/118 (27%), Positives = 58/118 (49%), Gaps = 3/118 (2%)
Frame = +3
Query: 87 GHEDMIHDAELDYYGLK---LATCSSDNSVKIYDIKNGTQTLAADLKGHFGPVWQVAWAH 257
GH M+ LD++ +K + +C +DN ++ + I NG+ T + + G Q+ +
Sbjct: 734 GHSSMV--TSLDFHPIKDDLICSCDNDNEIRYWSINNGSCT-----RVYKGGSTQIRF-Q 785
Query: 258 PKYGNLLASCSYDRKVIIWKESGEWTKLYEYTGHESSVNSVAWAPAEYGLILACCSSD 431
P+ G LA+ S + ++ E+ + GH + +NSV W P+ G LA S D
Sbjct: 786 PRVGKYLAASSANLVNVLDVET--QAIRHSLQGHANPINSVCWDPS--GDFLASVSED 839
Score = 36.3 bits (80), Expect = 0.014
Identities = 21/66 (31%), Positives = 33/66 (50%)
Frame = +3
Query: 276 LASCSYDRKVIIWKESGEWTKLYEYTGHESSVNSVAWAPAEYGLILACCSSDGSISIIQY 455
LA+ S+D+ V +W + L + GH S V S+ + P + LI CS D I +
Sbjct: 708 LATSSFDKTVRVWDADNKGYSLRTFMGHSSMVTSLDFHPIKDDLI---CSCDNDNEIRYW 764
Query: 456 SQDTGN 473
S + G+
Sbjct: 765 SINNGS 770
Score = 31.1 bits (67), Expect = 0.51
Identities = 21/90 (23%), Positives = 43/90 (47%)
Frame = +3
Query: 267 GNLLASCSYDRKVIIWKESGEWTKLYEYTGHESSVNSVAWAPAEYGLILACCSSDGSISI 446
G +LAS +D+K ++W K H + + + ++P++ L LA S D ++ +
Sbjct: 663 GKMLASAGHDKKAVLWYTDTMKPKT-TLEEHTAMITDIRFSPSQ--LRLATSSFDKTVRV 719
Query: 447 IQYSQDTGNWDVKKITGAHAIGVNSISWCP 536
+ D + ++ G H+ V S+ + P
Sbjct: 720 --WDADNKGYSLRTFMG-HSSMVTSLDFHP 746
>At1g11160.1 68414.m01278 WD-40 repeat family protein / katanin p80
subunit, putative similar to contains 6 WD-40 repeats
(PF00400); katanin p80 subunit (GI:3005601)
[Strongylocentrotus purpuratus]
Length = 974
Score = 41.9 bits (94), Expect = 3e-04
Identities = 37/151 (24%), Positives = 69/151 (45%)
Frame = +3
Query: 84 TGHEDMIHDAELDYYGLKLATCSSDNSVKIYDIKNGTQTLAADLKGHFGPVWQVAWAHPK 263
TGH E +G LA+ SSD +++++D + + KGH + + ++
Sbjct: 46 TGHRSNCSAVEFHPFGEFLASGSSDTNLRVWDTRK--KGCIQTYKGHTRGISTIEFSPD- 102
Query: 264 YGNLLASCSYDRKVIIWKESGEWTKLYEYTGHESSVNSVAWAPAEYGLILACCSSDGSIS 443
G + S D V +W + L+E+ HE + S+ + P E+ +LA S+D ++
Sbjct: 103 -GRWVVSGGLDNVVKVW-DLTAGKLLHEFKCHEGPIRSLDFHPLEF--LLATGSADRTVK 158
Query: 444 IIQYSQDTGNWDVKKITGAHAIGVNSISWCP 536
D +++ T A GV +I++ P
Sbjct: 159 F----WDLETFELIGTTRPEATGVRAIAFHP 185
>At4g22910.1 68417.m03309 WD-40 repeat family protein contains 6
WD-40 repeats (PF00400); similar to fizzy-related
protein (GI:5813825) Drosophila melanogaster,
PID:g2326419;
Length = 518
Score = 41.1 bits (92), Expect = 5e-04
Identities = 25/91 (27%), Positives = 47/91 (51%)
Frame = +3
Query: 138 LATCSSDNSVKIYDIKNGTQTLAADLKGHFGPVWQVAWAHPKYGNLLASCSYDRKVIIWK 317
L++ S D S+ DI+ + + L GH V + W++ LAS D ++ +W
Sbjct: 307 LSSGSRDKSILQRDIRC-QEDHVSKLAGHKSEVCGLKWSYDN--RELASGGNDNRLFVWN 363
Query: 318 ESGEWTKLYEYTGHESSVNSVAWAPAEYGLI 410
+ L +Y+ H ++V ++AW+P +GL+
Sbjct: 364 QHSTQPVL-KYSEHTAAVKAIAWSPHVHGLL 393
>At1g04140.2 68414.m00404 transducin family protein / WD-40 repeat
family protein contains 4 WD-40 repeats (PF00400);
similar to neural cell adhesion molecule 2, large
isoform precursor gb|M76710 from Xenopus laevis, and
beta transducin from S. cerevisiae gb|Q05946. ESTs
gb|N65081 gb|Z30910, gb|Z34190, gb|Z34611, gb|R30101,
gb|H36304, and gb|N65606 come from
Length = 793
Score = 40.7 bits (91), Expect = 6e-04
Identities = 24/75 (32%), Positives = 41/75 (54%), Gaps = 1/75 (1%)
Frame = +3
Query: 129 GLKLATCSSDNSVKIYDIKNGTQTLAADLKGHFGPVWQVAWAHPKYGNLLASCSYDRKVI 308
G LA+ D++VKI D + G L GH W V + HP++ ++AS S D +V
Sbjct: 115 GRTLASTHGDHTVKIIDCETGK--CLKILTGHRRTPWVVRF-HPRHSEIVASGSLDHEVR 171
Query: 309 IWK-ESGEWTKLYEY 350
+W ++GE + +++
Sbjct: 172 LWNAKTGECIRTHDF 186
>At1g04140.1 68414.m00403 transducin family protein / WD-40 repeat
family protein contains 4 WD-40 repeats (PF00400);
similar to neural cell adhesion molecule 2, large
isoform precursor gb|M76710 from Xenopus laevis, and
beta transducin from S. cerevisiae gb|Q05946. ESTs
gb|N65081 gb|Z30910, gb|Z34190, gb|Z34611, gb|R30101,
gb|H36304, and gb|N65606 come from
Length = 790
Score = 40.7 bits (91), Expect = 6e-04
Identities = 24/75 (32%), Positives = 41/75 (54%), Gaps = 1/75 (1%)
Frame = +3
Query: 129 GLKLATCSSDNSVKIYDIKNGTQTLAADLKGHFGPVWQVAWAHPKYGNLLASCSYDRKVI 308
G LA+ D++VKI D + G L GH W V + HP++ ++AS S D +V
Sbjct: 115 GRTLASTHGDHTVKIIDCETGK--CLKILTGHRRTPWVVRF-HPRHSEIVASGSLDHEVR 171
Query: 309 IWK-ESGEWTKLYEY 350
+W ++GE + +++
Sbjct: 172 LWNAKTGECIRTHDF 186
>At3g26640.1 68416.m03329 transducin family protein / WD-40 repeat
family protein contains 3 WD-40 repeats (PF00400);
similar to ATAN11 (GI:2290528) [Arabidopsis thaliana]
(Genes Dev. 11 (11), 1422-1434 (1997)); contains Pfam
profile: PF00400 WD domain, G-beta repeat (3 copies)
Length = 346
Score = 40.3 bits (90), Expect = 8e-04
Identities = 34/150 (22%), Positives = 66/150 (44%), Gaps = 1/150 (0%)
Frame = +3
Query: 66 VLNTIDTGHEDMIHDAELDYYGLKLATCSSDNSVKIYDIKNGTQTLAADLKGHFG-PVWQ 242
V++T H+ ++D G+ A+ S D SV+++D+++ + G P+ +
Sbjct: 169 VVDTQLIAHDKEVYDIAWGGVGV-FASVSEDGSVRVFDLRDKEHSTIIYESGEPSTPLVR 227
Query: 243 VAWAHPKYGNLLASCSYDRKVIIWKESGEWTKLYEYTGHESSVNSVAWAPAEYGLILACC 422
++W + K+++ + E H++SVN++AWAP I C
Sbjct: 228 LSWNKQDPRYMATVIMGSAKIVVLDIRFPALPVVELQRHQASVNAIAWAPHSSSHI--CS 285
Query: 423 SSDGSISIIQYSQDTGNWDVKKITGAHAIG 512
+ D S ++I WD+ + G H G
Sbjct: 286 AGDDSQALI--------WDISSM-GQHVEG 306
>At2g05720.1 68415.m00613 transducin family protein / WD-40 repeat
family protein Similar to U4/U6 small nuclear
ribonucleoprotein hPrp4 (gi:2708305)[Homo sapiens];
contains 4 WD-40 repeats
Length = 276
Score = 40.3 bits (90), Expect = 8e-04
Identities = 28/98 (28%), Positives = 46/98 (46%)
Frame = +3
Query: 87 GHEDMIHDAELDYYGLKLATCSSDNSVKIYDIKNGTQTLAADLKGHFGPVWQVAWAHPKY 266
GH + + G LA+ DN +I+D++ + L + H V QV + P+
Sbjct: 170 GHIKQVLSVDFSPNGYHLASGGEDNQCRIWDLR--MRKLLYIIPAHVNLVSQVKY-EPQE 226
Query: 267 GNLLASCSYDRKVIIWKESGEWTKLYEYTGHESSVNSV 380
LA+ S+D V IW +++ + GHES V S+
Sbjct: 227 RYFLATASHDMNVNIW-SGRDFSLVKSLVGHESKVASL 263
>At5g49430.1 68418.m06116 transducin family protein / WD-40 repeat
family protein similar to WD-repeat protein 9
(SP:Q9NSI6) {Homo sapiens}; contains Pfam PF00400: WD
domain, G-beta repeat (4 copies)
Length = 1677
Score = 39.1 bits (87), Expect = 0.002
Identities = 33/123 (26%), Positives = 59/123 (47%), Gaps = 3/123 (2%)
Frame = +3
Query: 87 GHEDMIHDAELDYYGLKLATCSSDNSVKIYDIKNGTQTLAADLKGHFGPVWQVAWAHPKY 266
GH + ++ A LD G + T S D VK++ + T A +GH G + +A +
Sbjct: 243 GHRNAVYCAILDRSGRYVITGSDDRLVKVWSM--DTAYCLASCRGHEGDITDLAVSSNNI 300
Query: 267 GNLLASCSYDRKVIIWKESGEWTKLYEYTGHESSVNSVAWAP---AEYGLILACCSSDGS 437
+AS S D + +W+ + + GH +V ++A++P + Y L+ + S DG+
Sbjct: 301 --FIASASNDCVIRVWR-LPDGLPVSVLRGHTGAVTAIAFSPRPGSPYQLLSS--SDDGT 355
Query: 438 ISI 446
I
Sbjct: 356 CRI 358
>At1g12910.1 68414.m01499 flower pigmentation protein (AN11)
contains 3 WD-40 repeats (PF00400); identical to
GB:AAC18912 from [Arabidopsis thaliana] (Genes Dev. 11
(11), 1422-1434 (1997))
Length = 346
Score = 38.7 bits (86), Expect = 0.003
Identities = 36/145 (24%), Positives = 68/145 (46%), Gaps = 4/145 (2%)
Frame = +3
Query: 90 HEDMIHDAELDYYGLKLATCSSDNSVKIYDIKNGTQ-TLAADLKGHFGPVWQVAW--AHP 260
H+ + D G+ A+ S+D SV+++D+++ T+ + P+ ++ W P
Sbjct: 177 HDKEVFDIAWGGVGV-FASVSADGSVRVFDLRDKEHSTIIYESSEPDTPLVRLGWNKQDP 235
Query: 261 KYGNLLASCSYDR-KVIIWKESGEWTKLYEYTGHESSVNSVAWAPAEYGLILACCSSDGS 437
+Y +A+ D KV++ + E H++SVN++AWAP + C + D S
Sbjct: 236 RY---MATIIMDSAKVVVLDIRFPALPVVELQRHQASVNAIAWAP--HSSCHICTAGDDS 290
Query: 438 ISIIQYSQDTGNWDVKKITGAHAIG 512
++I WD+ + G H G
Sbjct: 291 QALI--------WDISSM-GQHVEG 306
>At5g54520.1 68418.m06788 WD-40 repeat family protein contains 5
WD-40 repeats (PF00400); similar to pre-mRNA splicing
factor PRP17 (SP:O60508) [Homo sapiens]
Length = 457
Score = 37.9 bits (84), Expect = 0.004
Identities = 23/63 (36%), Positives = 38/63 (60%)
Frame = +3
Query: 129 GLKLATCSSDNSVKIYDIKNGTQTLAADLKGHFGPVWQVAWAHPKYGNLLASCSYDRKVI 308
G LA+ SSD SV +YD K + L LK + P V++ HP N++A+CS++ +V
Sbjct: 398 GETLASGSSDGSVYMYDYK--STALIKKLKAYEQPCVNVSY-HPVLPNVVAACSWNGQVS 454
Query: 309 IWK 317
+++
Sbjct: 455 VFE 457
>At3g15980.3 68416.m02022 coatomer protein complex, subunit beta 2
(beta prime), putative contains 7 WD-40 repeats
(PF00400) (1 weak); identical to coatomer protein
complex, beta prime (beta'-COP) protein {Arabidopsis
thaliana} (GI:9294445); similar to Coatomer beta'
subunit (Beta'-coat protein) (Beta'-COP) (p102)
(SP:P35606) [Homo sapiens]
Length = 918
Score = 37.9 bits (84), Expect = 0.004
Identities = 36/131 (27%), Positives = 56/131 (42%)
Frame = +3
Query: 150 SSDNSVKIYDIKNGTQTLAADLKGHFGPVWQVAWAHPKYGNLLASCSYDRKVIIWKESGE 329
S D +K++D +NG +GH V QV + +PK N AS S DR + IW G
Sbjct: 118 SDDMLIKLWDWENGWACTQI-FEGHSHYVMQVVF-NPKDTNTFASASLDRTIKIW-NLGS 174
Query: 330 WTKLYEYTGHESSVNSVAWAPAEYGLILACCSSDGSISIIQYSQDTGNWDVKKITGAHAI 509
+ H+ VN V + L S D + + Y + V+ + G H
Sbjct: 175 PDPNFTLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKS---CVQTLDG-HTH 230
Query: 510 GVNSISWCPAL 542
V+++ + P L
Sbjct: 231 NVSAVCFHPEL 241
Score = 29.1 bits (62), Expect = 2.1
Identities = 25/92 (27%), Positives = 37/92 (40%)
Frame = +3
Query: 255 HPKYGNLLASCSYDRKVIIWKESGEWTKLYEYTGHESSVNSVAWAPAEYGLILACCSSDG 434
HP +L+S S D + +W W + GH V V + P + A S D
Sbjct: 108 HPTLPYVLSS-SDDMLIKLWDWENGWACTQIFEGHSHYVMQVVFNPKDTN-TFASASLDR 165
Query: 435 SISIIQYSQDTGNWDVKKITGAHAIGVNSISW 530
+I I + G+ D AH GVN + +
Sbjct: 166 TIKI----WNLGSPDPNFTLDAHQKGVNCVDY 193
>At3g15980.2 68416.m02021 coatomer protein complex, subunit beta 2
(beta prime), putative contains 7 WD-40 repeats
(PF00400) (1 weak); identical to coatomer protein
complex, beta prime (beta'-COP) protein {Arabidopsis
thaliana} (GI:9294445); similar to Coatomer beta'
subunit (Beta'-coat protein) (Beta'-COP) (p102)
(SP:P35606) [Homo sapiens]
Length = 918
Score = 37.9 bits (84), Expect = 0.004
Identities = 36/131 (27%), Positives = 56/131 (42%)
Frame = +3
Query: 150 SSDNSVKIYDIKNGTQTLAADLKGHFGPVWQVAWAHPKYGNLLASCSYDRKVIIWKESGE 329
S D +K++D +NG +GH V QV + +PK N AS S DR + IW G
Sbjct: 118 SDDMLIKLWDWENGWACTQI-FEGHSHYVMQVVF-NPKDTNTFASASLDRTIKIW-NLGS 174
Query: 330 WTKLYEYTGHESSVNSVAWAPAEYGLILACCSSDGSISIIQYSQDTGNWDVKKITGAHAI 509
+ H+ VN V + L S D + + Y + V+ + G H
Sbjct: 175 PDPNFTLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKS---CVQTLDG-HTH 230
Query: 510 GVNSISWCPAL 542
V+++ + P L
Sbjct: 231 NVSAVCFHPEL 241
Score = 29.1 bits (62), Expect = 2.1
Identities = 25/92 (27%), Positives = 37/92 (40%)
Frame = +3
Query: 255 HPKYGNLLASCSYDRKVIIWKESGEWTKLYEYTGHESSVNSVAWAPAEYGLILACCSSDG 434
HP +L+S S D + +W W + GH V V + P + A S D
Sbjct: 108 HPTLPYVLSS-SDDMLIKLWDWENGWACTQIFEGHSHYVMQVVFNPKDTN-TFASASLDR 165
Query: 435 SISIIQYSQDTGNWDVKKITGAHAIGVNSISW 530
+I I + G+ D AH GVN + +
Sbjct: 166 TIKI----WNLGSPDPNFTLDAHQKGVNCVDY 193
>At3g15980.1 68416.m02020 coatomer protein complex, subunit beta 2
(beta prime), putative contains 7 WD-40 repeats
(PF00400) (1 weak); identical to coatomer protein
complex, beta prime (beta'-COP) protein {Arabidopsis
thaliana} (GI:9294445); similar to Coatomer beta'
subunit (Beta'-coat protein) (Beta'-COP) (p102)
(SP:P35606) [Homo sapiens]
Length = 909
Score = 37.9 bits (84), Expect = 0.004
Identities = 36/131 (27%), Positives = 56/131 (42%)
Frame = +3
Query: 150 SSDNSVKIYDIKNGTQTLAADLKGHFGPVWQVAWAHPKYGNLLASCSYDRKVIIWKESGE 329
S D +K++D +NG +GH V QV + +PK N AS S DR + IW G
Sbjct: 118 SDDMLIKLWDWENGWACTQI-FEGHSHYVMQVVF-NPKDTNTFASASLDRTIKIW-NLGS 174
Query: 330 WTKLYEYTGHESSVNSVAWAPAEYGLILACCSSDGSISIIQYSQDTGNWDVKKITGAHAI 509
+ H+ VN V + L S D + + Y + V+ + G H
Sbjct: 175 PDPNFTLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKS---CVQTLDG-HTH 230
Query: 510 GVNSISWCPAL 542
V+++ + P L
Sbjct: 231 NVSAVCFHPEL 241
Score = 29.1 bits (62), Expect = 2.1
Identities = 25/92 (27%), Positives = 37/92 (40%)
Frame = +3
Query: 255 HPKYGNLLASCSYDRKVIIWKESGEWTKLYEYTGHESSVNSVAWAPAEYGLILACCSSDG 434
HP +L+S S D + +W W + GH V V + P + A S D
Sbjct: 108 HPTLPYVLSS-SDDMLIKLWDWENGWACTQIFEGHSHYVMQVVFNPKDTN-TFASASLDR 165
Query: 435 SISIIQYSQDTGNWDVKKITGAHAIGVNSISW 530
+I I + G+ D AH GVN + +
Sbjct: 166 TIKI----WNLGSPDPNFTLDAHQKGVNCVDY 193
>At3g15880.2 68416.m02009 WD-40 repeat family protein contains Pfam
profile: PF00400 WD domain, G-beta repeat (7 copies)
Length = 1135
Score = 37.9 bits (84), Expect = 0.004
Identities = 27/107 (25%), Positives = 45/107 (42%), Gaps = 1/107 (0%)
Frame = +3
Query: 138 LATCSSDNSVKIYDIKNGTQTLA-ADLKGHFGPVWQVAWAHPKYGNLLASCSYDRKVIIW 314
L S + V IY G ++ H G V +A++ P + +C D+ + +W
Sbjct: 434 LGVAYSKHIVHIYSYHGGEDLRNHLEIDAHAGNVNDLAFSQPNQQLCVVTCGEDKTIKVW 493
Query: 315 KESGEWTKLYEYTGHESSVNSVAWAPAEYGLILACCSSDGSISIIQY 455
++ KL+ + GHE+ V SV E + + DG I Y
Sbjct: 494 -DAVTGNKLHTFEGHEAPVYSVCPHQKENIQFIFSTAVDGKIKAWLY 539
>At3g15880.1 68416.m02008 WD-40 repeat family protein contains Pfam
profile: PF00400 WD domain, G-beta repeat (7 copies)
Length = 1137
Score = 37.9 bits (84), Expect = 0.004
Identities = 27/107 (25%), Positives = 45/107 (42%), Gaps = 1/107 (0%)
Frame = +3
Query: 138 LATCSSDNSVKIYDIKNGTQTLA-ADLKGHFGPVWQVAWAHPKYGNLLASCSYDRKVIIW 314
L S + V IY G ++ H G V +A++ P + +C D+ + +W
Sbjct: 434 LGVAYSKHIVHIYSYHGGEDLRNHLEIDAHAGNVNDLAFSQPNQQLCVVTCGEDKTIKVW 493
Query: 315 KESGEWTKLYEYTGHESSVNSVAWAPAEYGLILACCSSDGSISIIQY 455
++ KL+ + GHE+ V SV E + + DG I Y
Sbjct: 494 -DAVTGNKLHTFEGHEAPVYSVCPHQKENIQFIFSTAVDGKIKAWLY 539
>At2g01330.1 68415.m00050 transducin family protein / WD-40 repeat
family protein contains 10 WD-40 repeats (PF00400);
similar to 66kDa stress protein (SWISS-PROT: P90587)[
Physarum polycephalum (Slime mold)]
Length = 474
Score = 37.9 bits (84), Expect = 0.004
Identities = 37/159 (23%), Positives = 70/159 (44%), Gaps = 2/159 (1%)
Frame = +3
Query: 60 ITVLNTIDTGHEDMIHDAELDYYGLKLATCSSDNSVKIYDIKNGTQTLAAD--LKGHFGP 233
+ +L+ ID G + + + G + D + IY + +G L + L+ H G
Sbjct: 302 LNILSKIDLGFA--VAASVISPDGKEAIVGGQDGKLHIYSV-SGDNNLKEEAVLEKHRGA 358
Query: 234 VWQVAWAHPKYGNLLASCSYDRKVIIWKESGEWTKLYEYTGHESSVNSVAWAPAEYGLIL 413
+ + ++ P + AS +R+ ++W + KL H + +NS+AW+P ++
Sbjct: 359 LTVIRYS-PDL-TMFASGDANREAVVWDRETKQVKLNNMLFHTARINSLAWSP--NNKMV 414
Query: 414 ACCSSDGSISIIQYSQDTGNWDVKKITGAHAIGVNSISW 530
A S D +I Y D AH GVN++++
Sbjct: 415 ATGSID--TCVIVYEVDKPASSRITARNAHLGGVNAVAF 451
Score = 36.7 bits (81), Expect = 0.010
Identities = 25/84 (29%), Positives = 42/84 (50%), Gaps = 2/84 (2%)
Frame = +3
Query: 90 HEDMIHDAELDYYGLKLATCSSDNSVKIYDIKNGTQT--LAADLKGHFGPVWQVAWAHPK 263
H + ++ G K T SSD IYD K G + LA++ GH G ++ V+W+ P
Sbjct: 50 HSNFVNCIRYSPDGTKFITVSSDKKGMIYDGKTGDKVGELASE-DGHKGSIYAVSWS-PD 107
Query: 264 YGNLLASCSYDRKVIIWKESGEWT 335
+L + S D+ +W+ + + T
Sbjct: 108 SKRVL-TVSADKSAKVWEVAEDGT 130
Score = 29.1 bits (62), Expect = 2.1
Identities = 26/112 (23%), Positives = 51/112 (45%), Gaps = 2/112 (1%)
Frame = +3
Query: 135 KLATCSSDNSVKIYDIKNGTQTLAADLKGHFGPVWQVAWAHPKYGNLLASCSYDRKVIIW 314
++ATC D V YD + + H V + ++ G + S D+K +I+
Sbjct: 23 RIATCGEDFLVNFYD--GPPFKFHSSHREHSNFVNCIRYSPD--GTKFITVSSDKKGMIY 78
Query: 315 --KESGEWTKLYEYTGHESSVNSVAWAPAEYGLILACCSSDGSISIIQYSQD 464
K + +L GH+ S+ +V+W+P ++ S+D S + + ++D
Sbjct: 79 DGKTGDKVGELASEDGHKGSIYAVSWSPDSKRVLTV--SADKSAKVWEVAED 128
>At5g43920.1 68418.m05372 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to will die slowly protein (WDS) (SP:Q9V3J8)
[Drosophila melanogaster]
Length = 523
Score = 37.1 bits (82), Expect = 0.008
Identities = 24/59 (40%), Positives = 36/59 (61%)
Frame = +3
Query: 138 LATCSSDNSVKIYDIKNGTQTLAADLKGHFGPVWQVAWAHPKYGNLLASCSYDRKVIIW 314
+A+ S D+ V I+++KN T+ L L GH V V+W +PK +LAS S D+ + IW
Sbjct: 458 IASGSEDSQVYIWNLKN-TKPLEV-LSGHSMTVNCVSW-NPKNPRMLASASDDQTIRIW 513
Score = 34.3 bits (75), Expect = 0.055
Identities = 27/137 (19%), Positives = 65/137 (47%), Gaps = 1/137 (0%)
Frame = +3
Query: 129 GLKLATCSSDNSVKIYDIKNGTQTLAADLKGHFGPVWQVAWAHP-KYGNLLASCSYDRKV 305
G + T SD ++I +++ + + ++ + P+ ++ + K+ + SC +++
Sbjct: 369 GESMITVFSDKEIRILNLETKVERVISEEQ----PITSLSISGDGKFFIVNLSC---QEI 421
Query: 306 IIWKESGEWTKLYEYTGHESSVNSVAWAPAEYGLILACCSSDGSISIIQYSQDTGNWDVK 485
+W +GEW + +++GH S + + +G + + + GS Y + N
Sbjct: 422 HLWDLAGEWKQPLKFSGHRQSKYVIR---SCFGGLDSSFIASGSEDSQVYIWNLKNTKPL 478
Query: 486 KITGAHAIGVNSISWCP 536
++ H++ VN +SW P
Sbjct: 479 EVLSGHSMTVNCVSWNP 495
>At3g49660.1 68416.m05427 transducin family protein / WD-40 repeat
family protein beta-transducin, Schizosaccharomyces
pombe, EMBL:CAA17803
Length = 317
Score = 37.1 bits (82), Expect = 0.008
Identities = 24/67 (35%), Positives = 37/67 (55%)
Frame = +3
Query: 129 GLKLATCSSDNSVKIYDIKNGTQTLAADLKGHFGPVWQVAWAHPKYGNLLASCSYDRKVI 308
G ++ + S DN V ++++ + + L L+GH V VA HP NL+AS S D+ V
Sbjct: 255 GKRIVSGSEDNCVHMWELNS--KKLLQKLEGHTETVMNVA-CHPTE-NLIASGSLDKTVR 310
Query: 309 IWKESGE 329
IW + E
Sbjct: 311 IWTQKKE 317
>At3g20740.1 68416.m02624 fertilization-independent endosperm
protein (FIE) contains 6 WD-40 repeats (PF00400);
identical to fertilization-independent endosperm protein
(GI:4567095) [Arabidopsis thaliana]
Length = 369
Score = 37.1 bits (82), Expect = 0.008
Identities = 26/85 (30%), Positives = 38/85 (44%), Gaps = 2/85 (2%)
Frame = +3
Query: 87 GHEDMIHDAELDYYGLKLA-TCSSDNSVKIYDIKNGTQTLA-ADLKGHFGPVWQVAWAHP 260
GH D +++ +L T S D SV++++++ G L A GH V V + HP
Sbjct: 126 GHGDSVNEIRTQPLKPQLVITASKDESVRLWNVETGICILIFAGAGGHRYEVLSVDF-HP 184
Query: 261 KYGNLLASCSYDRKVIIWKESGEWT 335
ASC D + IW WT
Sbjct: 185 SDIYRFASCGMDTTIKIWSMKEFWT 209
>At1g49040.1 68414.m05498 stomatal cytokinesis defective / SCD1
protein (SCD1) contains Pfam PF02141: DENN (AEX-3)
domain; contains Pfam PF00400: WD domain, G-beta repeat
(8 copies); identical to stomatal cytokinesis defective
[Arabidopsis thaliana] GI:19743728; supporting cDNA
gi|19743727|gb|AY082605.1|; PMID 12874123
Length = 1187
Score = 37.1 bits (82), Expect = 0.008
Identities = 33/99 (33%), Positives = 45/99 (45%)
Frame = +3
Query: 150 SSDNSVKIYDIKNGTQTLAADLKGHFGPVWQVAWAHPKYGNLLASCSYDRKVIIWKESGE 329
S+D VKI+D L A LKGH G V ++ K + S S D VI+W +
Sbjct: 874 STDCLVKIWDPSLRGSELRATLKGHTGTVRAISSDRGK----IVSGSDDLSVIVW-DKQT 928
Query: 330 WTKLYEYTGHESSVNSVAWAPAEYGLILACCSSDGSISI 446
L E GH+S V+ V E L A DG++ +
Sbjct: 929 TQLLEELKGHDSQVSCVKMLSGERVLTAA---HDGTVKM 964
>At1g18830.1 68414.m02345 transducin family protein / WD-40 repeat
family protein similar to Sec31p (GI:13928450) {Oryza
sativa}
Length = 969
Score = 37.1 bits (82), Expect = 0.008
Identities = 38/143 (26%), Positives = 67/143 (46%), Gaps = 8/143 (5%)
Frame = +3
Query: 135 KLATCSSDNSVKIYDIKNGTQTLAADLKGHFG----PVWQVAWAHPKYGNLLASCSYDRK 302
+LA+ + D +V I+D+ N ++ + LKG + ++W + + ++LAS S++
Sbjct: 130 QLASGADDGTVCIWDLANPSKP-SHYLKGTGSYMQSEISSLSW-NKGFQHVLASTSHNGT 187
Query: 303 VIIWKESGEWTKLYEYTGHESSVNSVAWAPAEYGLILACCSSDGSISI----IQYSQDTG 470
+IW + E T SV + W P + IL D S ++ I+Y Q
Sbjct: 188 TVIWDVNNEKIITDLKTTVRCSV--LQWDPDHFNQILVASDEDSSPNVKLLDIRYLQSP- 244
Query: 471 NWDVKKITGAHAIGVNSISWCPA 539
V+ G H GV ++ WCP+
Sbjct: 245 ---VRTFVG-HQRGVIAMEWCPS 263
>At5g08390.1 68418.m00988 transducin family protein / WD-40 repeat
family protein similar to katanin p80 subunit
[Strongylocentrotus purpuratus] GI:3005601; contains
Pfam profile PF00400: WD domain, G-beta repeat
Length = 871
Score = 36.7 bits (81), Expect = 0.010
Identities = 40/157 (25%), Positives = 68/157 (43%)
Frame = +3
Query: 66 VLNTIDTGHEDMIHDAELDYYGLKLATCSSDNSVKIYDIKNGTQTLAADLKGHFGPVWQV 245
V+ T+ TGH +G A+ S D ++KI+DI+ + KGH V V
Sbjct: 186 VVRTL-TGHRSNCVSVNFHPFGEFFASGSLDTNLKIWDIRK--KGCIHTYKGHTRGV-NV 241
Query: 246 AWAHPKYGNLLASCSYDRKVIIWKESGEWTKLYEYTGHESSVNSVAWAPAEYGLILACCS 425
P G + S D V +W + L+E+ HE + S+ + P E+ +LA S
Sbjct: 242 LRFTPD-GRWIVSGGEDNVVKVW-DLTAGKLLHEFKSHEGKIQSLDFHPHEF--LLATGS 297
Query: 426 SDGSISIIQYSQDTGNWDVKKITGAHAIGVNSISWCP 536
+D ++ D +++ G GV +++ P
Sbjct: 298 ADKTVKF----WDLETFELIGSGGTETTGVRCLTFNP 330
>At3g18860.2 68416.m02396 transducin family protein / WD-40 repeat
family protein contains seven G-protein beta WD-40
repeats; similar to phospholipase a-2-activating protein
SP:P27612 from [Mus musculus]
Length = 760
Score = 36.7 bits (81), Expect = 0.010
Identities = 32/82 (39%), Positives = 42/82 (51%)
Frame = +3
Query: 135 KLATCSSDNSVKIYDIKNGTQTLAADLKGHFGPVWQVAWAHPKYGNLLASCSYDRKVIIW 314
+L + SSD S+K++ K QTL+ GH V +A P G L S S+D + +W
Sbjct: 164 ELVSGSSDASLKLWKGKTSLQTLS----GHTDTVRGLA-VMPDLGFL--SASHDGSIRLW 216
Query: 315 KESGEWTKLYEYTGHESSVNSV 380
SGE L E GH S V SV
Sbjct: 217 ALSGE--VLLEMVGHTSLVYSV 236
>At3g18860.1 68416.m02395 transducin family protein / WD-40 repeat
family protein contains seven G-protein beta WD-40
repeats; similar to phospholipase a-2-activating protein
SP:P27612 from [Mus musculus]
Length = 760
Score = 36.7 bits (81), Expect = 0.010
Identities = 32/82 (39%), Positives = 42/82 (51%)
Frame = +3
Query: 135 KLATCSSDNSVKIYDIKNGTQTLAADLKGHFGPVWQVAWAHPKYGNLLASCSYDRKVIIW 314
+L + SSD S+K++ K QTL+ GH V +A P G L S S+D + +W
Sbjct: 164 ELVSGSSDASLKLWKGKTSLQTLS----GHTDTVRGLA-VMPDLGFL--SASHDGSIRLW 216
Query: 315 KESGEWTKLYEYTGHESSVNSV 380
SGE L E GH S V SV
Sbjct: 217 ALSGE--VLLEMVGHTSLVYSV 236
>At5g43930.1 68418.m05374 transducin family protein / WD-40 repeat
family protein contains 4 WD-40 repeats (PF00400);
similar to WD-repeat protein 5 (SP:Q9UGP9) [Homo
sapiens]
Length = 726
Score = 36.3 bits (80), Expect = 0.014
Identities = 22/62 (35%), Positives = 32/62 (51%)
Frame = +3
Query: 129 GLKLATCSSDNSVKIYDIKNGTQTLAADLKGHFGPVWQVAWAHPKYGNLLASCSYDRKVI 308
G LA+ D++VKI D + G L GH W V + HP + ++AS S D +V
Sbjct: 118 GRTLASTHGDHTVKIIDCETGNCLKV--LTGHRRTPWVVRF-HPHHSEIVASGSLDLEVR 174
Query: 309 IW 314
+W
Sbjct: 175 LW 176
>At2g33340.2 68415.m04087 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to cell cycle control protein cwf8 (SP:O14011)
[Schizosaccharomyces pombe (Fission yeast)]
Length = 537
Score = 36.3 bits (80), Expect = 0.014
Identities = 37/121 (30%), Positives = 60/121 (49%), Gaps = 1/121 (0%)
Frame = +3
Query: 129 GLKLATCSSDNSVKIYDIKNGTQTLAADLKGHFGPVWQVAWAHPKYGNLLASCSYDRKVI 308
GL L T +S + VKI+D+K +Q A GH G V ++++ + G LA+ + D V
Sbjct: 365 GLILGTGTSQSVVKIWDVK--SQANVAKFDGHTGEVTAISFS--ENGYFLATAAED-GVR 419
Query: 309 IWKESGEWTKLYEYTGHESS-VNSVAWAPAEYGLILACCSSDGSISIIQYSQDTGNWDVK 485
+W + KL + S+ NSV + P+ G L +SD I + Q + W++
Sbjct: 420 LW----DLRKLRNFKSFLSADANSVEFDPS--GSYLGIAASD--IKVYQTASVKAEWNLI 471
Query: 486 K 488
K
Sbjct: 472 K 472
>At2g33340.1 68415.m04086 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to cell cycle control protein cwf8 (SP:O14011)
[Schizosaccharomyces pombe (Fission yeast)]
Length = 565
Score = 36.3 bits (80), Expect = 0.014
Identities = 37/121 (30%), Positives = 60/121 (49%), Gaps = 1/121 (0%)
Frame = +3
Query: 129 GLKLATCSSDNSVKIYDIKNGTQTLAADLKGHFGPVWQVAWAHPKYGNLLASCSYDRKVI 308
GL L T +S + VKI+D+K +Q A GH G V ++++ + G LA+ + D V
Sbjct: 365 GLILGTGTSQSVVKIWDVK--SQANVAKFDGHTGEVTAISFS--ENGYFLATAAED-GVR 419
Query: 309 IWKESGEWTKLYEYTGHESS-VNSVAWAPAEYGLILACCSSDGSISIIQYSQDTGNWDVK 485
+W + KL + S+ NSV + P+ G L +SD I + Q + W++
Sbjct: 420 LW----DLRKLRNFKSFLSADANSVEFDPS--GSYLGIAASD--IKVYQTASVKAEWNLI 471
Query: 486 K 488
K
Sbjct: 472 K 472
>At1g80490.2 68414.m09430 WD-40 repeat family protein contains 9
WD-40 repeats domain (PF00400) (6 weak)
Length = 1120
Score = 36.3 bits (80), Expect = 0.014
Identities = 24/102 (23%), Positives = 44/102 (43%), Gaps = 1/102 (0%)
Frame = +3
Query: 153 SDNSVKIYDIKNGTQTLA-ADLKGHFGPVWQVAWAHPKYGNLLASCSYDRKVIIWKESGE 329
S + V++Y G ++ H G V +A++ P + +C D+ + +W ++
Sbjct: 437 SRHIVQLYSYHGGEDMRQHLEIDAHVGGVNDIAFSTPNKQLCVTTCGDDKTIKVW-DAAT 495
Query: 330 WTKLYEYTGHESSVNSVAWAPAEYGLILACCSSDGSISIIQY 455
K Y + GHE+ V S+ E + + DG I Y
Sbjct: 496 GVKRYTFEGHEAPVYSICPHYKENIQFIFSTALDGKIKAWLY 537
>At1g80490.1 68414.m09429 WD-40 repeat family protein contains 9
WD-40 repeats domain (PF00400) (6 weak)
Length = 1120
Score = 36.3 bits (80), Expect = 0.014
Identities = 24/102 (23%), Positives = 44/102 (43%), Gaps = 1/102 (0%)
Frame = +3
Query: 153 SDNSVKIYDIKNGTQTLA-ADLKGHFGPVWQVAWAHPKYGNLLASCSYDRKVIIWKESGE 329
S + V++Y G ++ H G V +A++ P + +C D+ + +W ++
Sbjct: 437 SRHIVQLYSYHGGEDMRQHLEIDAHVGGVNDIAFSTPNKQLCVTTCGDDKTIKVW-DAAT 495
Query: 330 WTKLYEYTGHESSVNSVAWAPAEYGLILACCSSDGSISIIQY 455
K Y + GHE+ V S+ E + + DG I Y
Sbjct: 496 GVKRYTFEGHEAPVYSICPHYKENIQFIFSTALDGKIKAWLY 537
>At3g63460.2 68416.m07146 WD-40 repeat family protein hypothetical
protein contains similarity to ec31p [Oryza sativa]
gi|13928450|dbj|BAB47154; contains Pfam profile PF00400:
WD domain, G-beta repeat
Length = 1102
Score = 35.9 bits (79), Expect = 0.018
Identities = 34/142 (23%), Positives = 61/142 (42%), Gaps = 5/142 (3%)
Frame = +3
Query: 138 LATCSSDNSVKIYDI-KNGTQTLAADLKGHF----GPVWQVAWAHPKYGNLLASCSYDRK 302
LA+ + D + I+D+ K + LKG G + ++W + K +LAS SY+
Sbjct: 138 LASGADDGEICIWDLLKPSEPSHFPLLKGSGSATQGEISFISW-NRKVQQILASTSYNGT 196
Query: 303 VIIWKESGEWTKLYEYTGHESSVNSVAWAPAEYGLILACCSSDGSISIIQYSQDTGNWDV 482
+IW + + + + W P I+ D S ++ + V
Sbjct: 197 TVIWDLRKQKPIINFADSVRRRCSVLQWNPNVTTQIMVASDDDSSPTLKLWDMRNIMSPV 256
Query: 483 KKITGAHAIGVNSISWCPALSA 548
++ TG H GV ++ WCP+ S+
Sbjct: 257 REFTG-HQRGVIAMEWCPSDSS 277
Score = 32.7 bits (71), Expect = 0.17
Identities = 11/44 (25%), Positives = 23/44 (52%)
Frame = +3
Query: 309 IWKESGEWTKLYEYTGHESSVNSVAWAPAEYGLILACCSSDGSI 440
+W + + E+TGH+ V ++ W P++ +L C + +I
Sbjct: 246 LWDMRNIMSPVREFTGHQRGVIAMEWCPSDSSYLLTCAKDNRTI 289
>At3g63460.1 68416.m07145 WD-40 repeat family protein hypothetical
protein contains similarity to ec31p [Oryza sativa]
gi|13928450|dbj|BAB47154; contains Pfam profile PF00400:
WD domain, G-beta repeat
Length = 1104
Score = 35.9 bits (79), Expect = 0.018
Identities = 34/142 (23%), Positives = 61/142 (42%), Gaps = 5/142 (3%)
Frame = +3
Query: 138 LATCSSDNSVKIYDI-KNGTQTLAADLKGHF----GPVWQVAWAHPKYGNLLASCSYDRK 302
LA+ + D + I+D+ K + LKG G + ++W + K +LAS SY+
Sbjct: 138 LASGADDGEICIWDLLKPSEPSHFPLLKGSGSATQGEISFISW-NRKVQQILASTSYNGT 196
Query: 303 VIIWKESGEWTKLYEYTGHESSVNSVAWAPAEYGLILACCSSDGSISIIQYSQDTGNWDV 482
+IW + + + + W P I+ D S ++ + V
Sbjct: 197 TVIWDLRKQKPIINFADSVRRRCSVLQWNPNVTTQIMVASDDDSSPTLKLWDMRNIMSPV 256
Query: 483 KKITGAHAIGVNSISWCPALSA 548
++ TG H GV ++ WCP+ S+
Sbjct: 257 REFTG-HQRGVIAMEWCPSDSS 277
Score = 32.7 bits (71), Expect = 0.17
Identities = 11/44 (25%), Positives = 23/44 (52%)
Frame = +3
Query: 309 IWKESGEWTKLYEYTGHESSVNSVAWAPAEYGLILACCSSDGSI 440
+W + + E+TGH+ V ++ W P++ +L C + +I
Sbjct: 246 LWDMRNIMSPVREFTGHQRGVIAMEWCPSDSSYLLTCAKDNRTI 289
>At5g64730.1 68418.m08140 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to Will die slowly protein (SP:Q9V3J8) [Fruit
fly] {Drosophila m.]
Length = 299
Score = 35.5 bits (78), Expect = 0.024
Identities = 28/99 (28%), Positives = 42/99 (42%), Gaps = 1/99 (1%)
Frame = +3
Query: 87 GHEDMIHDAELDYYGLKLATCSSDNSVKIYDIKNGTQTLAADLKGHFGPVWQVAWAHPKY 266
GHE + A + G TC D ++++++ G L K H V V H
Sbjct: 16 GHEGAVLAARFNGDGNYALTCGKDRTIRLWNPHRG--ILIKTYKSHGREVRDV---HVTS 70
Query: 267 GNL-LASCSYDRKVIIWKESGEWTKLYEYTGHESSVNSV 380
N SC DR+V W S + ++ GH+ VN+V
Sbjct: 71 DNAKFCSCGGDRQVYYWDVS-TGRVIRKFRGHDGEVNAV 108
>At5g53500.1 68418.m06649 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 654
Score = 35.5 bits (78), Expect = 0.024
Identities = 29/99 (29%), Positives = 42/99 (42%), Gaps = 2/99 (2%)
Frame = +3
Query: 210 DLKGHFGPVWQVAWAHPKYGNLLASCSYDRKVIIWKESGEWTKLYEYTGHESSVNSVAWA 389
+ +GH G V ++W+ Y L S S D+ V +WK H S V SV +
Sbjct: 323 EFRGHTGEVLDISWSKDNY---LLSASMDKTVRLWKVGS--NDCLGVFAHNSYVTSVQFN 377
Query: 390 PAEYGLILACCSSDGSISIIQYSQ-DTGNW-DVKKITGA 500
P ++ S DG + I S +W D+K I A
Sbjct: 378 PVNENYFMS-GSIDGKVRIWNISGCSVVDWADLKDIISA 415
>At5g27030.1 68418.m03224 WD-40 repeat family protein contains 8
WD-40 repeats (PF00400) (2 weak)
Length = 1108
Score = 35.5 bits (78), Expect = 0.024
Identities = 21/82 (25%), Positives = 38/82 (46%)
Frame = +3
Query: 210 DLKGHFGPVWQVAWAHPKYGNLLASCSYDRKVIIWKESGEWTKLYEYTGHESSVNSVAWA 389
++ H G V +A+A+P + +C D+ + +W SG K + + GH++ V S+
Sbjct: 447 EIDAHVGAVNDLAFANPNRQLCVITCGDDKLIKVWDVSGR--KHFTFEGHDAPVYSICPH 504
Query: 390 PAEYGLILACCSSDGSISIIQY 455
E + + DG I Y
Sbjct: 505 YKENIQFIFSTAIDGKIKAWLY 526
>At5g23430.2 68418.m02749 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
katanin p80 subunit (GI:3005601) [Strongylocentrotus
purpuratus]
Length = 836
Score = 35.5 bits (78), Expect = 0.024
Identities = 39/151 (25%), Positives = 64/151 (42%)
Frame = +3
Query: 84 TGHEDMIHDAELDYYGLKLATCSSDNSVKIYDIKNGTQTLAADLKGHFGPVWQVAWAHPK 263
TGH + +G A+ S D ++KI+DI+ + KGH V V P
Sbjct: 98 TGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRK--KGCIHTYKGHTRGV-NVLRFTPD 154
Query: 264 YGNLLASCSYDRKVIIWKESGEWTKLYEYTGHESSVNSVAWAPAEYGLILACCSSDGSIS 443
G + S D V +W + L E+ HE + S+ + P E+ +LA S+D ++
Sbjct: 155 -GRWVVSGGEDNIVKVW-DLTAGKLLTEFKSHEGQIQSLDFHPHEF--LLATGSADRTVK 210
Query: 444 IIQYSQDTGNWDVKKITGAHAIGVNSISWCP 536
D +++ G GV +S+ P
Sbjct: 211 F----WDLETFELIGSGGPETAGVRCLSFNP 237
>At5g23430.1 68418.m02748 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
katanin p80 subunit (GI:3005601) [Strongylocentrotus
purpuratus]
Length = 837
Score = 35.5 bits (78), Expect = 0.024
Identities = 39/151 (25%), Positives = 64/151 (42%)
Frame = +3
Query: 84 TGHEDMIHDAELDYYGLKLATCSSDNSVKIYDIKNGTQTLAADLKGHFGPVWQVAWAHPK 263
TGH + +G A+ S D ++KI+DI+ + KGH V V P
Sbjct: 98 TGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRK--KGCIHTYKGHTRGV-NVLRFTPD 154
Query: 264 YGNLLASCSYDRKVIIWKESGEWTKLYEYTGHESSVNSVAWAPAEYGLILACCSSDGSIS 443
G + S D V +W + L E+ HE + S+ + P E+ +LA S+D ++
Sbjct: 155 -GRWVVSGGEDNIVKVW-DLTAGKLLTEFKSHEGQIQSLDFHPHEF--LLATGSADRTVK 210
Query: 444 IIQYSQDTGNWDVKKITGAHAIGVNSISWCP 536
D +++ G GV +S+ P
Sbjct: 211 F----WDLETFELIGSGGPETAGVRCLSFNP 237
>At4g35140.1 68417.m04996 transducin family protein / WD-40 repeat
family protein contains 6 (3 significant) WD-40 repeats;
similar to PC326 protein (GI:200241) (PIR2:S37694)
[Mus musculus]; Human (H326) mRNA, Homo sapiens,
gb:U06631
Length = 496
Score = 35.5 bits (78), Expect = 0.024
Identities = 17/58 (29%), Positives = 31/58 (53%)
Frame = +3
Query: 267 GNLLASCSYDRKVIIWKESGEWTKLYEYTGHESSVNSVAWAPAEYGLILACCSSDGSI 440
G++L S S DR+V++W KL ++GH ++V + P + C++DG +
Sbjct: 71 GDVLISGSDDRRVVLWDWQLGNVKLSFHSGHANNVFQAKFMPFSDDRTIVTCAADGMV 128
>At4g33270.1 68417.m04734 WD-40 repeat family protein contains 6
WD-40 repeats (PF00400); WD-repeat protein -Daucus
carota,PID:g2253631
Length = 457
Score = 35.5 bits (78), Expect = 0.024
Identities = 22/90 (24%), Positives = 40/90 (44%)
Frame = +3
Query: 117 LDYYGLKLATCSSDNSVKIYDIKNGTQTLAADLKGHFGPVWQVAWAHPKYGNLLASCSYD 296
LD+ + + D++V ++D G+ + + GPV + WA G +A +
Sbjct: 146 LDWGSANVLAIALDHTVYLWDASTGSTSELVTIDEEKGPVTSINWAPD--GRHVAVGLNN 203
Query: 297 RKVIIWKESGEWTKLYEYTGHESSVNSVAW 386
+V +W + GH+S V S+AW
Sbjct: 204 SEVQLWDSASNRQLRTLKGGHQSRVGSLAW 233
Score = 31.5 bits (68), Expect = 0.39
Identities = 22/88 (25%), Positives = 39/88 (44%), Gaps = 1/88 (1%)
Frame = +3
Query: 270 NLLASCSYDRKVIIWKES-GEWTKLYEYTGHESSVNSVAWAPAEYGLILACCSSDGSISI 446
N+LA + D V +W S G ++L + V S+ WAP + + +S+
Sbjct: 152 NVLA-IALDHTVYLWDASTGSTSELVTIDEEKGPVTSINWAPDGRHVAVGLNNSE----- 205
Query: 447 IQYSQDTGNWDVKKITGAHAIGVNSISW 530
+Q N ++ + G H V S++W
Sbjct: 206 VQLWDSASNRQLRTLKGGHQSRVGSLAW 233
Score = 28.7 bits (61), Expect = 2.7
Identities = 31/138 (22%), Positives = 57/138 (41%), Gaps = 2/138 (1%)
Frame = +3
Query: 129 GLKLATCSSDNSVKIYDIKNGTQTLAADLKGHFGPVWQVAWAHPKYGNLLASCSYDRKVI 308
G +A +++ V+++D + Q L GH V +AW + ++L + D +I
Sbjct: 194 GRHVAVGLNNSEVQLWDSASNRQ-LRTLKGGHQSRVGSLAWNN----HILTTGGMDGLII 248
Query: 309 IWKESGEWTKLYEYTGHESSVNSVAWAPAEYGLILACCSSDGSISIIQYSQDTGNWDVKK 488
+ Y GH V + W+ + G LA +D + I S + N +
Sbjct: 249 NNDVRIRSPIVETYRGHTQEVCGLKWSGS--GQQLASGGNDNVVHIWDRSVASSNSTTQW 306
Query: 489 I--TGAHAIGVNSISWCP 536
+ H V +++WCP
Sbjct: 307 LHRLEEHTSAVKALAWCP 324
>At4g33260.1 68417.m04733 WD-40 repeat family protein contains 6
WD-40 repeats (PF00400); WD-repeat protein -Daucus
carota, PID:g2253631
Length = 447
Score = 35.5 bits (78), Expect = 0.024
Identities = 22/90 (24%), Positives = 40/90 (44%)
Frame = +3
Query: 117 LDYYGLKLATCSSDNSVKIYDIKNGTQTLAADLKGHFGPVWQVAWAHPKYGNLLASCSYD 296
LD+ + + D++V ++D G+ + + GPV + WA G +A +
Sbjct: 136 LDWGSANVLAIALDHTVYLWDASTGSTSELVTIDEEKGPVTSINWAPD--GRHVAVGLNN 193
Query: 297 RKVIIWKESGEWTKLYEYTGHESSVNSVAW 386
+V +W + GH+S V S+AW
Sbjct: 194 SEVQLWDSASNRQLRTLKGGHQSRVGSLAW 223
Score = 31.5 bits (68), Expect = 0.39
Identities = 22/88 (25%), Positives = 39/88 (44%), Gaps = 1/88 (1%)
Frame = +3
Query: 270 NLLASCSYDRKVIIWKES-GEWTKLYEYTGHESSVNSVAWAPAEYGLILACCSSDGSISI 446
N+LA + D V +W S G ++L + V S+ WAP + + +S+
Sbjct: 142 NVLA-IALDHTVYLWDASTGSTSELVTIDEEKGPVTSINWAPDGRHVAVGLNNSE----- 195
Query: 447 IQYSQDTGNWDVKKITGAHAIGVNSISW 530
+Q N ++ + G H V S++W
Sbjct: 196 VQLWDSASNRQLRTLKGGHQSRVGSLAW 223
Score = 28.7 bits (61), Expect = 2.7
Identities = 31/138 (22%), Positives = 57/138 (41%), Gaps = 2/138 (1%)
Frame = +3
Query: 129 GLKLATCSSDNSVKIYDIKNGTQTLAADLKGHFGPVWQVAWAHPKYGNLLASCSYDRKVI 308
G +A +++ V+++D + Q L GH V +AW + ++L + D +I
Sbjct: 184 GRHVAVGLNNSEVQLWDSASNRQ-LRTLKGGHQSRVGSLAWNN----HILTTGGMDGLII 238
Query: 309 IWKESGEWTKLYEYTGHESSVNSVAWAPAEYGLILACCSSDGSISIIQYSQDTGNWDVKK 488
+ Y GH V + W+ + G LA +D + I S + N +
Sbjct: 239 NNDVRIRSPIVETYRGHTQEVCGLKWSGS--GQQLASGGNDNVVHIWDRSVASSNSTTQW 296
Query: 489 I--TGAHAIGVNSISWCP 536
+ H V +++WCP
Sbjct: 297 LHRLEEHTSAVKALAWCP 314
>At1g52360.1 68414.m05909 coatomer protein complex, subunit beta 2
(beta prime), putative contains 7 WD-40 repeats
(PF00400) (1 weak); similar to (SP:O55029) Coatomer
beta' subunit (Beta'-coat protein) (Beta'-COP) (p102)
(SP:O55029) [Mus musculus]; similar to GI:298096 from
[Homo sapiens]
Length = 926
Score = 35.5 bits (78), Expect = 0.024
Identities = 35/131 (26%), Positives = 55/131 (41%)
Frame = +3
Query: 150 SSDNSVKIYDIKNGTQTLAADLKGHFGPVWQVAWAHPKYGNLLASCSYDRKVIIWKESGE 329
S D +K++D + G +GH V QV + +PK N AS S DR + IW G
Sbjct: 118 SDDMLIKLWDWEKGWACTQI-FEGHSHYVMQVTF-NPKDTNTFASASLDRTIKIW-NLGS 174
Query: 330 WTKLYEYTGHESSVNSVAWAPAEYGLILACCSSDGSISIIQYSQDTGNWDVKKITGAHAI 509
+ H+ VN V + L S D + + Y + V+ + G H
Sbjct: 175 PDPNFTLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKS---CVQTLEG-HTH 230
Query: 510 GVNSISWCPAL 542
V+++ + P L
Sbjct: 231 NVSAVCFHPEL 241
Score = 28.3 bits (60), Expect = 3.6
Identities = 25/92 (27%), Positives = 37/92 (40%)
Frame = +3
Query: 255 HPKYGNLLASCSYDRKVIIWKESGEWTKLYEYTGHESSVNSVAWAPAEYGLILACCSSDG 434
HP +L+S S D + +W W + GH V V + P + A S D
Sbjct: 108 HPTLPYVLSS-SDDMLIKLWDWEKGWACTQIFEGHSHYVMQVTFNPKDTN-TFASASLDR 165
Query: 435 SISIIQYSQDTGNWDVKKITGAHAIGVNSISW 530
+I I + G+ D AH GVN + +
Sbjct: 166 TIKI----WNLGSPDPNFTLDAHQKGVNCVDY 193
>At1g48870.1 68414.m05474 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]; similar to rab11 binding protein GI:4512103
from [Bos taurus]
Length = 593
Score = 31.1 bits (67), Expect(2) = 0.029
Identities = 16/41 (39%), Positives = 23/41 (56%)
Frame = +3
Query: 195 QTLAADLKGHFGPVWQVAWAHPKYGNLLASCSYDRKVIIWK 317
+T +L GH G V +AW+ NLL S S D+ V +W+
Sbjct: 262 ETPFQELYGHTGDVLDLAWSD---SNLLLSASKDKTVRLWR 299
Score = 23.0 bits (47), Expect(2) = 0.029
Identities = 15/44 (34%), Positives = 20/44 (45%)
Frame = +3
Query: 87 GHEDMIHDAELDYYGLKLATCSSDNSVKIYDIKNGTQTLAADLK 218
GH+ I + G LAT D VKI+ I LA+ L+
Sbjct: 196 GHKGKIWTLKFSPDGKYLATGGEDGVVKIWRITLSDSLLASFLR 239
>At1g79990.1 68414.m09356 coatomer protein complex, subunit beta 2
(beta prime), putative contains 7 WD-40 repeats
(PF00400) (1 weak); similar to Coatomer beta' subunit
(Beta'-coat protein) (Beta'-COP) (p102) (SP:P35606)
[Homo sapiens]; similar to Coatomer beta' subunit
(Beta'-coat protein) (Beta'-COP) (p102) (SP:O55029) [Mus
musculus]
Length = 920
Score = 35.1 bits (77), Expect = 0.031
Identities = 36/131 (27%), Positives = 55/131 (41%)
Frame = +3
Query: 150 SSDNSVKIYDIKNGTQTLAADLKGHFGPVWQVAWAHPKYGNLLASCSYDRKVIIWKESGE 329
S D +K++D + G +GH V QV + +PK N AS S DR + IW G
Sbjct: 118 SDDMLIKLWDWEKGWLCTQI-FEGHSHYVMQVTF-NPKDTNTFASASLDRTIKIW-NLGS 174
Query: 330 WTKLYEYTGHESSVNSVAWAPAEYGLILACCSSDGSISIIQYSQDTGNWDVKKITGAHAI 509
+ H VN V + L S D + + Y + V+ + G H
Sbjct: 175 PDPNFTLDAHLKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKS---CVQTLEG-HTH 230
Query: 510 GVNSISWCPAL 542
V+++S+ P L
Sbjct: 231 NVSAVSFHPEL 241
>At4g29830.1 68417.m04246 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400); G
protein beta subunit-like protein, Schistosoma mansoni,
gb:U30261
Length = 321
Score = 34.7 bits (76), Expect = 0.042
Identities = 26/91 (28%), Positives = 44/91 (48%), Gaps = 4/91 (4%)
Frame = +3
Query: 63 TVLNTIDTGHEDMIHDAELDYYGLKLATCSSDNSVKIYDIKNGTQTLAADLKGHFGPVWQ 242
T+L ++ +GH + + G +AT SSD +V+++D+K + + H VW
Sbjct: 234 TLLGSM-SGHTSWVLSVDASPDGGAIATGSSDRTVRLWDLK--MRAAIQTMSNHNDQVWS 290
Query: 243 VAWAHP----KYGNLLASCSYDRKVIIWKES 323
VA+ P LAS S D+ V ++ S
Sbjct: 291 VAFRPPGGTGVRAGRLASVSDDKSVSLYDYS 321
>At5g27570.1 68418.m03302 WD-40 repeat family protein contains 5
WD-40 repeats (PF00400); similar to fizzy1 (GI:3298595)
{Xenopus laevis}; similar to "Will die slowly" protein,
Drosophia; putative cdc20 protein - Arabidopsis
thaliana, EMBL:AF029262
Length = 411
Score = 33.9 bits (74), Expect = 0.073
Identities = 34/141 (24%), Positives = 59/141 (41%), Gaps = 5/141 (3%)
Frame = +3
Query: 129 GLKLATCSSDNSVKIYDIKNGTQTLAADLKGHFGPVWQVAWAHPKYGNLLASCSYDRKVI 308
GL LA ++ V+++D + Q GH V +AW + ++L + D K++
Sbjct: 146 GLDLAIGLDNSEVQLWDCVSNRQVRTLR-GGHESRVGSLAWNN----HILTTGGMDGKIV 200
Query: 309 IWKESGEWTKLYEYTGHESSVNSVAWAPAEYGLILACCSSDGSISI-----IQYSQDTGN 473
+ + Y GH V + W+ E G LA +D + I + S T
Sbjct: 201 NNDVRIRSSIVETYLGHTEEVCGLKWS--ESGKKLASGGNDNVVHIWDHRSVASSNPTRQ 258
Query: 474 WDVKKITGAHAIGVNSISWCP 536
W + + H V +++WCP
Sbjct: 259 W-LHRFE-EHTAAVRALAWCP 277
Score = 31.1 bits (67), Expect = 0.51
Identities = 35/131 (26%), Positives = 59/131 (45%), Gaps = 8/131 (6%)
Frame = +3
Query: 87 GHEDMIHDAELDYYGLKLATCSSDNSVKIYDIK-----NGTQTLAADLKGHFGPVWQVAW 251
GH + + + G KLA+ +DN V I+D + N T+ + H V +AW
Sbjct: 216 GHTEEVCGLKWSESGKKLASGGNDNVVHIWDHRSVASSNPTRQWLHRFEEHTAAVRALAW 275
Query: 252 AHPKYGNLLASCS--YDRKVIIWK-ESGEWTKLYEYTGHESSVNSVAWAPAEYGLILACC 422
P +LLA+ D K+ W +G E TG S V S+ W+ +E L+ +
Sbjct: 276 C-PFQASLLATGGGVGDGKIKFWNTHTGACLNSVE-TG--SQVCSLLWSKSERELLSSHG 331
Query: 423 SSDGSISIIQY 455
+ +++ +Y
Sbjct: 332 FTQNQLTLWKY 342
Score = 29.1 bits (62), Expect = 2.1
Identities = 24/88 (27%), Positives = 35/88 (39%), Gaps = 1/88 (1%)
Frame = +3
Query: 270 NLLASCSYDRKVIIWK-ESGEWTKLYEYTGHESSVNSVAWAPAEYGLILACCSSDGSISI 446
N+LA D V +W SG KL E V S+ W L + +S+
Sbjct: 104 NVLAIALGDT-VYLWDASSGSTYKLVTIDEEEGPVTSINWTQDGLDLAIGLDNSE----- 157
Query: 447 IQYSQDTGNWDVKKITGAHAIGVNSISW 530
+Q N V+ + G H V S++W
Sbjct: 158 VQLWDCVSNRQVRTLRGGHESRVGSLAW 185
Score = 28.7 bits (61), Expect = 2.7
Identities = 22/90 (24%), Positives = 37/90 (41%)
Frame = +3
Query: 117 LDYYGLKLATCSSDNSVKIYDIKNGTQTLAADLKGHFGPVWQVAWAHPKYGNLLASCSYD 296
LD+ + + ++V ++D +G+ + GPV + W G LA +
Sbjct: 98 LDWGSSNVLAIALGDTVYLWDASSGSTYKLVTIDEEEGPVTSINWTQD--GLDLAIGLDN 155
Query: 297 RKVIIWKESGEWTKLYEYTGHESSVNSVAW 386
+V +W GHES V S+AW
Sbjct: 156 SEVQLWDCVSNRQVRTLRGGHESRVGSLAW 185
>At3g18140.1 68416.m02306 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
similar to Pop3 (GP:3434986) [Schizosaccharomyces pombe]
Length = 305
Score = 33.9 bits (74), Expect = 0.073
Identities = 26/78 (33%), Positives = 41/78 (52%), Gaps = 1/78 (1%)
Frame = +3
Query: 138 LATCSSDNSVKIYDIKNGTQTLAADLKGHFGPVWQVAWAHPKYGNLLASCSYDRKVIIWK 317
LAT SSD +VKI+++ +G + L L GH VW ++ G L + S D +W
Sbjct: 226 LATASSDKTVKIWNV-DGFK-LEKVLTGHQRWVWDCVFSVD--GEFLVTASSDMTARLWS 281
Query: 318 -ESGEWTKLYEYTGHESS 368
+G+ K+Y+ GH +
Sbjct: 282 MPAGKEVKVYQ--GHHKA 297
>At1g36070.1 68414.m04484 WD-40 repeat family protein contains 2
WD-40 repeats (PF0400);similar to guanine
nucleotide-binding protein beta subunit GPBA (SP:P36408)
[Dictyostelium discoideum (Slime mold)]; similar to
katanin p80 (WD40-containing) subunit B 1 (GI:12655011)
[Homo sapiens]
Length = 418
Score = 33.9 bits (74), Expect = 0.073
Identities = 17/50 (34%), Positives = 30/50 (60%)
Frame = +3
Query: 87 GHEDMIHDAELDYYGLKLATCSSDNSVKIYDIKNGTQTLAADLKGHFGPV 236
GH+D + GL LAT + D + +++DI+N +++ A LKG+ G +
Sbjct: 288 GHKDYSFASAWHPNGLILATGNQDTACRLWDIRNPSESFAV-LKGNMGAI 336
>At5g27945.1 68418.m03364 transducin family protein / WD-40 repeat
family protein fizzy-related (FZR); contains 6 WD-40
repeats (PF00400); WD-repeat protein,
carrot,(gi:2253631) PIR:T14352
Length = 428
Score = 33.5 bits (73), Expect = 0.096
Identities = 33/140 (23%), Positives = 58/140 (41%), Gaps = 4/140 (2%)
Frame = +3
Query: 129 GLKLATCSSDNSVKIYDIKNGTQTLAADLKGHFGPVWQVAWAHPKYGNLLASCSYDRKVI 308
GL LA ++ V+++D + GH V +AW + ++L + D K++
Sbjct: 164 GLDLAVGLDNSEVQVWDCVSNRHVRTLR-GGHESRVGSLAWNN----HILTTGGMDGKIV 218
Query: 309 IWKESGEWTKLYEYTGHESSVNSVAWAPAEYGLILACCSSDGSISI----IQYSQDTGNW 476
+ + Y GH V + W+ E G LA +D + I + S T W
Sbjct: 219 NNDVRIRSSIIGTYVGHTEEVCGLKWS--ESGKKLASGGNDNVVHIWDRSLASSNPTRQW 276
Query: 477 DVKKITGAHAIGVNSISWCP 536
+ + H V +++WCP
Sbjct: 277 -LHRFE-EHTAAVRALAWCP 294
Score = 32.7 bits (71), Expect = 0.17
Identities = 36/130 (27%), Positives = 58/130 (44%), Gaps = 7/130 (5%)
Frame = +3
Query: 87 GHEDMIHDAELDYYGLKLATCSSDNSVKIYD----IKNGTQTLAADLKGHFGPVWQVAWA 254
GH + + + G KLA+ +DN V I+D N T+ + H V +AW
Sbjct: 234 GHTEEVCGLKWSESGKKLASGGNDNVVHIWDRSLASSNPTRQWLHRFEEHTAAVRALAWC 293
Query: 255 HPKYGNLLASCS--YDRKVIIWK-ESGEWTKLYEYTGHESSVNSVAWAPAEYGLILACCS 425
P +LLA+ D K+ W +G E TG S V S+ W+ +E L+ A
Sbjct: 294 -PFQASLLATGGGVGDGKINFWNTHTGACLNSVE-TG--SQVCSLLWSKSERELLSAHGF 349
Query: 426 SDGSISIIQY 455
+ +++ +Y
Sbjct: 350 TQNQLTLWKY 359
>At5g15550.1 68418.m01820 transducin family protein / WD-40 repeat
family protein similar to YTM1 - Homo sapiens,
EMBL:AF242546; contains Pfam PF00400: WD domain, G-beta
repeat (7 copies,1 weak);
Length = 433
Score = 33.5 bits (73), Expect = 0.096
Identities = 30/111 (27%), Positives = 42/111 (37%), Gaps = 1/111 (0%)
Frame = +3
Query: 69 LNTIDTGHEDMIHDAELDYYGLKLATCSSDNSVKIYDI-KNGTQTLAADLKGHFGPVWQV 245
LNT+D G E +A SD ++++D K GT H +
Sbjct: 315 LNTVDVGGES----------SALIAAGGSDPILRVWDPRKPGTSAPVFQFSSHSSWISAC 364
Query: 246 AWAHPKYGNLLASCSYDRKVIIWKESGEWTKLYEYTGHESSVNSVAWAPAE 398
W + +LL S SYD K+++W W L H V S W E
Sbjct: 365 KWHKSSWFHLL-SASYDGKIMLWDLRTAW-PLSVIDTHNDKVLSADWWKGE 413
>At4g18905.1 68417.m02787 transducin family protein / WD-40 repeat
family protein contains 5 (4 significant) WD-40 repeats;
similar to periodic tryptophan protein 1 homolog
(Keratinocyte protein IEF SSP 9502) (PWP1)(SP:Q13610)
(PIR2:I39360) [Homo sapiens]
Length = 494
Score = 33.5 bits (73), Expect = 0.096
Identities = 19/55 (34%), Positives = 29/55 (52%)
Frame = +3
Query: 222 HFGPVWQVAWAHPKYGNLLASCSYDRKVIIWKESGEWTKLYEYTGHESSVNSVAW 386
H V +AW + ++ N+LAS S D+KV +W + K+ H V +VAW
Sbjct: 264 HTESVLGLAW-NKEFRNILASASADKKVKVWDVATGTCKI-TMEHHTKEVQAVAW 316
Score = 29.9 bits (64), Expect = 1.2
Identities = 14/39 (35%), Positives = 24/39 (61%)
Frame = +3
Query: 138 LATCSSDNSVKIYDIKNGTQTLAADLKGHFGPVWQVAWA 254
LAT S D SVK++D+ N + A + + G V+ +++A
Sbjct: 420 LATGSMDKSVKLWDLSNNEPSCIATHQPNAGAVFSISFA 458
>At4g18900.1 68417.m02786 transducin family protein / WD-40 repeat
family protein contains 5 (4 significant) WD-40 repeats;
similar to periodic tryptophan protein 1 homolog
(Keratinocyte protein IEF SSP 9502) (PWP1)(SP:Q13610)
(PIR2:I39360) [Homo sapiens]
Length = 461
Score = 33.5 bits (73), Expect = 0.096
Identities = 19/55 (34%), Positives = 29/55 (52%)
Frame = +3
Query: 222 HFGPVWQVAWAHPKYGNLLASCSYDRKVIIWKESGEWTKLYEYTGHESSVNSVAW 386
H V +AW + ++ N+LAS S D+KV +W + K+ H V +VAW
Sbjct: 232 HTRSVLGLAW-NKEFRNILASASADKKVKVWDVATGTCKI-TMEHHTKEVQAVAW 284
>At5g50230.1 68418.m06221 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to TIPD PROTEIN (SP:O15736)[Dictyostelium
discoideum]
Length = 515
Score = 33.1 bits (72), Expect = 0.13
Identities = 26/97 (26%), Positives = 40/97 (41%)
Frame = +3
Query: 90 HEDMIHDAELDYYGLKLATCSSDNSVKIYDIKNGTQTLAADLKGHFGPVWQVAWAHPKYG 269
HE +Y L T D +VK++D +G TL L G G + +A H
Sbjct: 230 HEGGCGSIVFEYNSGTLFTGGQDRAVKMWDTNSG--TLIKSLYGSLGNILDMAVTHDNKS 287
Query: 270 NLLASCSYDRKVIIWKESGEWTKLYEYTGHESSVNSV 380
+ A+ S + +W S + + TGH V +V
Sbjct: 288 VIAATSS--NNLFVWDVSSGRVR-HTLTGHTDKVCAV 321
>At1g15750.2 68414.m01890 WD-40 repeat family protein contains 10
WD-40 repeats (PF00400) (1 weak)
Length = 1131
Score = 33.1 bits (72), Expect = 0.13
Identities = 23/102 (22%), Positives = 44/102 (43%), Gaps = 1/102 (0%)
Frame = +3
Query: 153 SDNSVKIYDIKNGTQTLA-ADLKGHFGPVWQVAWAHPKYGNLLASCSYDRKVIIWKESGE 329
S + V++Y G ++ H G V ++++ P + +C D+ + +W ++
Sbjct: 437 SRHIVQLYSYHGGEDMRQHLEIDAHVGGVNDISFSTPNKQLCVITCGDDKTIKVW-DAAT 495
Query: 330 WTKLYEYTGHESSVNSVAWAPAEYGLILACCSSDGSISIIQY 455
K + + GHE+ V SV E + + DG I Y
Sbjct: 496 GVKRHTFEGHEAPVYSVCPHYKENIQFIFSTALDGKIKAWLY 537
>At1g15750.1 68414.m01889 WD-40 repeat family protein contains 10
WD-40 repeats (PF00400) (1 weak)
Length = 1131
Score = 33.1 bits (72), Expect = 0.13
Identities = 23/102 (22%), Positives = 44/102 (43%), Gaps = 1/102 (0%)
Frame = +3
Query: 153 SDNSVKIYDIKNGTQTLA-ADLKGHFGPVWQVAWAHPKYGNLLASCSYDRKVIIWKESGE 329
S + V++Y G ++ H G V ++++ P + +C D+ + +W ++
Sbjct: 437 SRHIVQLYSYHGGEDMRQHLEIDAHVGGVNDISFSTPNKQLCVITCGDDKTIKVW-DAAT 495
Query: 330 WTKLYEYTGHESSVNSVAWAPAEYGLILACCSSDGSISIIQY 455
K + + GHE+ V SV E + + DG I Y
Sbjct: 496 GVKRHTFEGHEAPVYSVCPHYKENIQFIFSTALDGKIKAWLY 537
>At5g27080.1 68418.m03231 WD-40 repeat family protein contains 5
WD-40 repeats (PF00400); similar to fizzy1 (GI:3298595)
{Xenopus laevis};
Length = 466
Score = 32.7 bits (71), Expect = 0.17
Identities = 33/141 (23%), Positives = 60/141 (42%), Gaps = 5/141 (3%)
Frame = +3
Query: 129 GLKLATCSSDNSVKIYDIKNGTQTLAADLKGHFGPVWQVAWAHPKYGNLLASCSYDRKVI 308
GL LA ++ V+++D + Q + GH V +AW + ++L + D K++
Sbjct: 177 GLDLAVGLDNSEVQLWDFVSNRQVRTL-IGGHESRVGSLAWNN----HILTTGGMDGKIV 231
Query: 309 IWKESGEWTKLYEYTGHESSVNSVAWAPAEYGLILACCSSDGSISI-----IQYSQDTGN 473
+ + Y GH V + W+ E G LA + + I + S+ T
Sbjct: 232 NNDVRIRSSIVGTYLGHTEEVCGLKWS--ESGKKLASGGNYNVVHIWDHRSVASSKPTRQ 289
Query: 474 WDVKKITGAHAIGVNSISWCP 536
W + + H V +++WCP
Sbjct: 290 W-LHRFE-EHTAAVRALAWCP 308
Score = 30.3 bits (65), Expect = 0.89
Identities = 22/90 (24%), Positives = 38/90 (42%)
Frame = +3
Query: 117 LDYYGLKLATCSSDNSVKIYDIKNGTQTLAADLKGHFGPVWQVAWAHPKYGNLLASCSYD 296
LD+ + + ++V ++D +G+ + + GPV + W G LA +
Sbjct: 129 LDWGSANVLAIALGDTVYLWDASSGSTSELVTIDEDKGPVTSINWTQD--GLDLAVGLDN 186
Query: 297 RKVIIWKESGEWTKLYEYTGHESSVNSVAW 386
+V +W GHES V S+AW
Sbjct: 187 SEVQLWDFVSNRQVRTLIGGHESRVGSLAW 216
Score = 27.9 bits (59), Expect = 4.8
Identities = 23/88 (26%), Positives = 38/88 (43%), Gaps = 1/88 (1%)
Frame = +3
Query: 270 NLLASCSYDRKVIIWK-ESGEWTKLYEYTGHESSVNSVAWAPAEYGLILACCSSDGSISI 446
N+LA D V +W SG ++L + V S+ W + GL LA + + +
Sbjct: 135 NVLAIALGDT-VYLWDASSGSTSELVTIDEDKGPVTSINWT--QDGLDLAVGLDNSEVQL 191
Query: 447 IQYSQDTGNWDVKKITGAHAIGVNSISW 530
+ N V+ + G H V S++W
Sbjct: 192 WDF---VSNRQVRTLIGGHESRVGSLAW 216
>At5g26900.1 68418.m03208 WD-40 repeat family protein contains 5
WD-40 repeats (PF00400); similar to fizzy1 (GI:3298595)
{Xenopus laevis}; WD-repeat protein, carrot, PIR:T14352
Length = 444
Score = 32.7 bits (71), Expect = 0.17
Identities = 33/140 (23%), Positives = 59/140 (42%), Gaps = 4/140 (2%)
Frame = +3
Query: 129 GLKLATCSSDNSVKIYDIKNGTQTLAADLKGHFGPVWQVAWAHPKYGNLLASCSYDRKVI 308
GL LA ++ V+++D + Q GH V +AW + ++L + D K++
Sbjct: 180 GLDLAVGLDNSEVQLWDCVSNRQVRTLR-GGHESRVGSLAWDN----HILTTGGMDGKIV 234
Query: 309 IWKESGEWTKLYEYTGHESSVNSVAWAPAEYGLILACCSSDGSISI----IQYSQDTGNW 476
+ + Y GH V + W+ E G A +D + I + S+ T W
Sbjct: 235 NNDVRIRSSIVETYLGHTEEVCGLKWS--ESGNKQASGGNDNVVHIWDRSLASSKQTRQW 292
Query: 477 DVKKITGAHAIGVNSISWCP 536
+ + H V +++WCP
Sbjct: 293 -LHRFE-EHTAAVRALAWCP 310
Score = 29.5 bits (63), Expect = 1.6
Identities = 22/90 (24%), Positives = 38/90 (42%)
Frame = +3
Query: 117 LDYYGLKLATCSSDNSVKIYDIKNGTQTLAADLKGHFGPVWQVAWAHPKYGNLLASCSYD 296
LD+ + + ++V ++D +G+ + + GPV + W G LA +
Sbjct: 132 LDWGSANVLAIALGDTVYLWDASSGSTSELVTIDEDKGPVTSINWTQD--GLDLAVGLDN 189
Query: 297 RKVIIWKESGEWTKLYEYTGHESSVNSVAW 386
+V +W GHES V S+AW
Sbjct: 190 SEVQLWDCVSNRQVRTLRGGHESRVGSLAW 219
>At4g35370.1 68417.m05025 transducin family protein / WD-40 repeat
family protein contains 4 (3 significant) WD-40 repeats;
similar to periodic tryptophan protein 1 homolog
(Keratinocyte protein IEF SSP 9502) (PWP1)(SP:Q13610)
(PIR2:I39360) [Homo sapiens]
Length = 414
Score = 32.7 bits (71), Expect = 0.17
Identities = 27/90 (30%), Positives = 48/90 (53%), Gaps = 1/90 (1%)
Frame = +3
Query: 270 NLLASCSYDRKVIIWK-ESGEWTKLYEYTGHESSVNSVAWAPAEYGLILACCSSDGSISI 446
N++AS S D+KV +W +G+ E+ HE V++VAW ++L+ S D ++ +
Sbjct: 228 NIVASGSEDKKVKVWDVATGKCKVTMEH--HEKKVHAVAWNNYTPEVLLS-GSRDRTV-V 283
Query: 447 IQYSQDTGNWDVKKITGAHAIGVNSISWCP 536
++ +D N +K T A V ++W P
Sbjct: 284 LKDGRDPSNSGLKWSTEAK---VEKLAWDP 310
>At3g16650.1 68416.m02128 PP1/PP2A phosphatases pleiotropic
regulator 2 (PRL2) identical to SP|Q39190 PP1/PP2A
phosphatases pleiotropic regulator PRL2 {Arabidopsis
thaliana}, GB:Q39190 from [Arabidopsis thaliana];
contains Pfam PF00400: WD domain, G-beta repeat (7
copies, 1 weak)
Length = 479
Score = 32.7 bits (71), Expect = 0.17
Identities = 27/102 (26%), Positives = 43/102 (42%)
Frame = +3
Query: 87 GHEDMIHDAELDYYGLKLATCSSDNSVKIYDIKNGTQTLAADLKGHFGPVWQVAWAHPKY 266
GH + D T S+D ++KI+D+ G L L GH G V +A ++
Sbjct: 168 GHLGWVRSVAFDPSNEWFCTGSADRTIKIWDVATG--VLKLTLTGHIGQVRGLAVSNRH- 224
Query: 267 GNLLASCSYDRKVIIWKESGEWTKLYEYTGHESSVNSVAWAP 392
+ S D++V W + + + Y GH V +A P
Sbjct: 225 -TYMFSAGDDKQVKCW-DLEQNKVIRSYHGHLHGVYCLALHP 264
>At1g64610.2 68414.m07324 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 647
Score = 32.7 bits (71), Expect = 0.17
Identities = 23/79 (29%), Positives = 38/79 (48%)
Frame = +3
Query: 210 DLKGHFGPVWQVAWAHPKYGNLLASCSYDRKVIIWKESGEWTKLYEYTGHESSVNSVAWA 389
+ KGH G + ++W+ Y L S S D V +W+ + L +T H + V VA+
Sbjct: 317 EFKGHIGEILDLSWSEKGY---LLSSSVDETVRLWRVGCD-ECLRTFT-HNNFVTCVAFN 371
Query: 390 PAEYGLILACCSSDGSISI 446
P + ++ S DG + I
Sbjct: 372 PVDDNYFIS-GSIDGKVRI 389
>At1g64610.1 68414.m07323 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 647
Score = 32.7 bits (71), Expect = 0.17
Identities = 23/79 (29%), Positives = 38/79 (48%)
Frame = +3
Query: 210 DLKGHFGPVWQVAWAHPKYGNLLASCSYDRKVIIWKESGEWTKLYEYTGHESSVNSVAWA 389
+ KGH G + ++W+ Y L S S D V +W+ + L +T H + V VA+
Sbjct: 317 EFKGHIGEILDLSWSEKGY---LLSSSVDETVRLWRVGCD-ECLRTFT-HNNFVTCVAFN 371
Query: 390 PAEYGLILACCSSDGSISI 446
P + ++ S DG + I
Sbjct: 372 PVDDNYFIS-GSIDGKVRI 389
>At3g45620.1 68416.m04927 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats; similar to
PC326 protein (GI:200241) (PIR2:S37694) [Mus
musculus];Human (H326) translated mRNA - Homo sapiens,
EMBL:HS06631
Length = 481
Score = 32.3 bits (70), Expect = 0.22
Identities = 27/101 (26%), Positives = 46/101 (45%)
Frame = +3
Query: 201 LAADLKGHFGPVWQVAWAHPKYGNLLASCSYDRKVIIWKESGEWTKLYEYTGHESSVNSV 380
L L GH G V V + G++L S S DR++++W KL +GH +V
Sbjct: 47 LYGKLNGHEGCVNAVEFNST--GDVLVSGSDDRQIMLWNWLSGSRKLSYPSGHCENVFQT 104
Query: 381 AWAPAEYGLILACCSSDGSISIIQYSQDTGNWDVKKITGAH 503
+ P + +DG + + Q ++ G + K++ G H
Sbjct: 105 KFIPFTDDRTIITSGADGQVRLGQILEN-GKVETKRL-GRH 143
>At3g09080.1 68416.m01067 transducin family protein / WD-40 repeat
family protein contains 8 WD-40 repeats; similar to
JNK-binding protein JNKBP1 (GP:6069583) [Mus musculus]
Length = 1026
Score = 32.3 bits (70), Expect = 0.22
Identities = 30/117 (25%), Positives = 52/117 (44%), Gaps = 2/117 (1%)
Frame = +3
Query: 102 IHDAELDYYGLKLATCSSDNSVKIYDIKNG--TQTLAADLKGHFGPVWQVAWAHPKYGNL 275
I+D +D + T D + I+DI++G ++ D + H PV + P L
Sbjct: 529 IYDVAVDPTSGLVVTVGQDKKINIFDIESGKLVRSFKQD-RDHGDPVKVI--LDPSCNYL 585
Query: 276 LASCSYDRKVIIWKESGEWTKLYEYTGHESSVNSVAWAPAEYGLILACCSSDGSISI 446
+ CSY + I + + + + TGH +V V + P +I +SDG I +
Sbjct: 586 V--CSYSNRTICFVDFVTGELVAQATGHGEAVTGVIFLPDCKHII--SVASDGCIFV 638
>At5g19920.1 68418.m02370 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
related to TipD protein (SP:O15736, PIR:T08602)
[Dictyostelium discoideum]; related to WD-repeat protein
RBAP1 (GI:9716495) [Zea mays]
Length = 656
Score = 31.9 bits (69), Expect = 0.29
Identities = 20/63 (31%), Positives = 33/63 (52%)
Frame = +3
Query: 129 GLKLATCSSDNSVKIYDIKNGTQTLAADLKGHFGPVWQVAWAHPKYGNLLASCSYDRKVI 308
GL +++ S+D + I+DI+ + + +K H V++ W H Y LL S S D +
Sbjct: 594 GLHISSGSADPVIHIFDIRYNAPSPSLSMKAHKKRVFKAEW-HSSY-PLLVSISSDLAIG 651
Query: 309 IWK 317
I K
Sbjct: 652 IHK 654
>At4g01860.2 68417.m00244 transducin family protein / WD-40 repeat
family protein contains ten G-protein beta-subunit
(beta-transducin) WD-40 repeats
Length = 1308
Score = 31.9 bits (69), Expect = 0.29
Identities = 13/41 (31%), Positives = 21/41 (51%)
Frame = +3
Query: 411 LACCSSDGSISIIQYSQDTGNWDVKKITGAHAIGVNSISWC 533
+A DGS+ + +Y+ + GNW ++ G H G S C
Sbjct: 785 IATGCEDGSVRLSRYASEFGNWSTSELLGEHVGGSAVRSVC 825
Score = 27.5 bits (58), Expect = 6.3
Identities = 30/135 (22%), Positives = 52/135 (38%), Gaps = 4/135 (2%)
Frame = +3
Query: 138 LATCSSDNSVKIYDIKNGTQTLAADLKGHFGPVWQVAWAHPKYGNLLASCSYDRKVIIWK 317
LA SDNS+ I+D+K W +AS + ++I+W+
Sbjct: 150 LAIGCSDNSLSIWDVKESRMAFEIQSPERCLLYTMRLWGDSISTLRIASGTIFNEIIVWR 209
Query: 318 ESGEWTKLYEYTGHESSVNSVAWAPAEYGLILACCSSDGSISIIQYSQDTGN--WDV--K 485
G ++ GH S+ + + E + S DGS I+ S D W++ +
Sbjct: 210 AVGLDGDNVDH-GHYSASHMLRLTGHEGSIFRIVWSLDGS-KIVSVSDDRSARIWEIDSQ 267
Query: 486 KITGAHAIGVNSISW 530
++ G G + W
Sbjct: 268 EVVGPVLFGHSVRVW 282
>At4g01860.1 68417.m00243 transducin family protein / WD-40 repeat
family protein contains ten G-protein beta-subunit
(beta-transducin) WD-40 repeats
Length = 1308
Score = 31.9 bits (69), Expect = 0.29
Identities = 13/41 (31%), Positives = 21/41 (51%)
Frame = +3
Query: 411 LACCSSDGSISIIQYSQDTGNWDVKKITGAHAIGVNSISWC 533
+A DGS+ + +Y+ + GNW ++ G H G S C
Sbjct: 785 IATGCEDGSVRLSRYASEFGNWSTSELLGEHVGGSAVRSVC 825
Score = 27.5 bits (58), Expect = 6.3
Identities = 30/135 (22%), Positives = 52/135 (38%), Gaps = 4/135 (2%)
Frame = +3
Query: 138 LATCSSDNSVKIYDIKNGTQTLAADLKGHFGPVWQVAWAHPKYGNLLASCSYDRKVIIWK 317
LA SDNS+ I+D+K W +AS + ++I+W+
Sbjct: 150 LAIGCSDNSLSIWDVKESRMAFEIQSPERCLLYTMRLWGDSISTLRIASGTIFNEIIVWR 209
Query: 318 ESGEWTKLYEYTGHESSVNSVAWAPAEYGLILACCSSDGSISIIQYSQDTGN--WDV--K 485
G ++ GH S+ + + E + S DGS I+ S D W++ +
Sbjct: 210 AVGLDGDNVDH-GHYSASHMLRLTGHEGSIFRIVWSLDGS-KIVSVSDDRSARIWEIDSQ 267
Query: 486 KITGAHAIGVNSISW 530
++ G G + W
Sbjct: 268 EVVGPVLFGHSVRVW 282
>At1g10580.1 68414.m01192 transducin family protein / WD-40 repeat
family protein similar to splicing factor hPRP17
(gi|3283220); contains 7 WD-40 repeats (PF00400);similar
to ESTs emb|F15435 and dbj|AUO62661
Length = 573
Score = 31.9 bits (69), Expect = 0.29
Identities = 15/44 (34%), Positives = 21/44 (47%)
Frame = +3
Query: 258 PKYGNLLASCSYDRKVIIWKESGEWTKLYEYTGHESSVNSVAWA 389
PK G+LL S D KV IW + Y GH +V + ++
Sbjct: 292 PKQGHLLLSAGMDCKVKIWDVYNSGKCMRTYMGHAKAVRDICFS 335
>At5g63010.1 68418.m07905 WD-40 repeat family protein contains 4
WD-40 repeats (PF00400);low similarity to
photomorphogenesis repressor (COP1) GI:2702280
[Arabidopsis thaliana] and COP1 GI:11127996 [Ipomoea
nil]
Length = 343
Score = 31.5 bits (68), Expect = 0.39
Identities = 20/82 (24%), Positives = 37/82 (45%), Gaps = 1/82 (1%)
Frame = +3
Query: 144 TCSSDNSVKIYDIKNGTQTLAADLKGHFGPVWQVAWAHPKY-GNLLASCSYDRKVIIWKE 320
T S D +++++D ++ ++ L G VW++ HP G +LA+C ++ +
Sbjct: 228 TGSYDETLRVWDTRSVSRPLNETSVSLGGGVWRIK-HHPSLSGVVLAACMHNGFALAKVS 286
Query: 321 SGEWTKLYEYTGHESSVNSVAW 386
G+ L Y H S W
Sbjct: 287 DGKGEVLESYNKHHSLAYGADW 308
>At4g34460.3 68417.m04900 guanine nucleotide-binding protein beta
subunit (GB1) / GTP-binding protein beta subunit (AGB1)
/ transducin contains 7 WD-40 repeats (PF00400);
identical to Guanine nucleotide-binding protein beta
subunit.SP:P49177 [Arabidopsis thaliana]; Weiss, CA et
al, PNAS 91:9954 (1994)
Length = 347
Score = 31.5 bits (68), Expect = 0.39
Identities = 24/91 (26%), Positives = 38/91 (41%), Gaps = 3/91 (3%)
Frame = +3
Query: 138 LATCSSDNSVKIYDIKNGTQT--LAADLK-GHFGPVWQVAWAHPKYGNLLASCSYDRKVI 308
L T S D + ++D+ G +T + + GH V V+ + N S S D
Sbjct: 172 LITSSGDQTCILWDVTTGLKTSVFGGEFQSGHTADVLSVSISGSN-PNWFISGSCDSTAR 230
Query: 309 IWKESGEWTKLYEYTGHESSVNSVAWAPAEY 401
+W + + GHE VN+V + P Y
Sbjct: 231 LWDTRAASRAVRTFHGHEGDVNTVKFFPDGY 261
Score = 31.1 bits (67), Expect = 0.51
Identities = 17/58 (29%), Positives = 28/58 (48%), Gaps = 2/58 (3%)
Frame = +3
Query: 87 GHEDMIHDAELDYYGLKLATCSSDNSVKIYDIKNG--TQTLAADLKGHFGPVWQVAWA 254
GHE ++ + G + T S D + ++YDI+ G Q G GPV +A++
Sbjct: 246 GHEGDVNTVKFFPDGYRFGTGSDDGTCRLYDIRTGHQLQVYQPHGDGENGPVTSIAFS 303
>At4g34460.2 68417.m04898 guanine nucleotide-binding protein beta
subunit (GB1) / GTP-binding protein beta subunit (AGB1)
/ transducin contains 7 WD-40 repeats (PF00400);
identical to Guanine nucleotide-binding protein beta
subunit.SP:P49177 [Arabidopsis thaliana]; Weiss, CA et
al, PNAS 91:9954 (1994)
Length = 315
Score = 31.5 bits (68), Expect = 0.39
Identities = 24/91 (26%), Positives = 38/91 (41%), Gaps = 3/91 (3%)
Frame = +3
Query: 138 LATCSSDNSVKIYDIKNGTQT--LAADLK-GHFGPVWQVAWAHPKYGNLLASCSYDRKVI 308
L T S D + ++D+ G +T + + GH V V+ + N S S D
Sbjct: 110 LITSSGDQTCILWDVTTGLKTSVFGGEFQSGHTADVLSVSISGSN-PNWFISGSCDSTAR 168
Query: 309 IWKESGEWTKLYEYTGHESSVNSVAWAPAEY 401
+W + + GHE VN+V + P Y
Sbjct: 169 LWDTRAASRAVRTFHGHEGDVNTVKFFPDGY 199
Score = 31.1 bits (67), Expect = 0.51
Identities = 17/58 (29%), Positives = 28/58 (48%), Gaps = 2/58 (3%)
Frame = +3
Query: 87 GHEDMIHDAELDYYGLKLATCSSDNSVKIYDIKNG--TQTLAADLKGHFGPVWQVAWA 254
GHE ++ + G + T S D + ++YDI+ G Q G GPV +A++
Sbjct: 184 GHEGDVNTVKFFPDGYRFGTGSDDGTCRLYDIRTGHQLQVYQPHGDGENGPVTSIAFS 241
>At4g34460.1 68417.m04899 guanine nucleotide-binding protein beta
subunit (GB1) / GTP-binding protein beta subunit (AGB1)
/ transducin contains 7 WD-40 repeats (PF00400);
identical to Guanine nucleotide-binding protein beta
subunit.SP:P49177 [Arabidopsis thaliana]; Weiss, CA et
al, PNAS 91:9954 (1994)
Length = 377
Score = 31.5 bits (68), Expect = 0.39
Identities = 24/91 (26%), Positives = 38/91 (41%), Gaps = 3/91 (3%)
Frame = +3
Query: 138 LATCSSDNSVKIYDIKNGTQT--LAADLK-GHFGPVWQVAWAHPKYGNLLASCSYDRKVI 308
L T S D + ++D+ G +T + + GH V V+ + N S S D
Sbjct: 172 LITSSGDQTCILWDVTTGLKTSVFGGEFQSGHTADVLSVSISGSN-PNWFISGSCDSTAR 230
Query: 309 IWKESGEWTKLYEYTGHESSVNSVAWAPAEY 401
+W + + GHE VN+V + P Y
Sbjct: 231 LWDTRAASRAVRTFHGHEGDVNTVKFFPDGY 261
Score = 31.1 bits (67), Expect = 0.51
Identities = 17/58 (29%), Positives = 28/58 (48%), Gaps = 2/58 (3%)
Frame = +3
Query: 87 GHEDMIHDAELDYYGLKLATCSSDNSVKIYDIKNG--TQTLAADLKGHFGPVWQVAWA 254
GHE ++ + G + T S D + ++YDI+ G Q G GPV +A++
Sbjct: 246 GHEGDVNTVKFFPDGYRFGTGSDDGTCRLYDIRTGHQLQVYQPHGDGENGPVTSIAFS 303
>At4g15900.1 68417.m02416 PP1/PP2A phosphatases pleiotropic
regulator 1 (PRL1) identical to PP1/PP2A phosphatases
pleiotropic regulator PRL1 (SP:Q42384) [Arabidopsis
thaliana], PRL1 [Arabidopsis thaliana] GI:577733;
contains Pfam PF00400: WD domain, G-beta repeat (7
copies)
Length = 486
Score = 31.5 bits (68), Expect = 0.39
Identities = 27/102 (26%), Positives = 43/102 (42%)
Frame = +3
Query: 87 GHEDMIHDAELDYYGLKLATCSSDNSVKIYDIKNGTQTLAADLKGHFGPVWQVAWAHPKY 266
GH + D T S+D ++KI+D+ G L L GH V +A ++
Sbjct: 174 GHLGWVRSVAFDPSNEWFCTGSADRTIKIWDVATG--VLKLTLTGHIEQVRGLAVSNRH- 230
Query: 267 GNLLASCSYDRKVIIWKESGEWTKLYEYTGHESSVNSVAWAP 392
+ S D++V W + + + Y GH S V +A P
Sbjct: 231 -TYMFSAGDDKQVKCW-DLEQNKVIRSYHGHLSGVYCLALHP 270
>At2g47990.1 68415.m06006 transducin family protein / WD-40 repeat
family protein similar to Vegetatible incompatibility
protein HET-E-1 (SP:Q00808) {Podospora anserina};
contains 5 WD-40 repeats (PF00400); similar to beta
transducin-like protein HET-E2C*4
(GP:17225206)[Podospora anserina]
Length = 530
Score = 31.5 bits (68), Expect = 0.39
Identities = 26/93 (27%), Positives = 39/93 (41%)
Frame = +3
Query: 132 LKLATCSSDNSVKIYDIKNGTQTLAADLKGHFGPVWQVAWAHPKYGNLLASCSYDRKVII 311
L L + D VK +D+ T + +DL GH V + P ++L + SYD V +
Sbjct: 149 LHLVSGGDDGVVKYWDVAGAT--VISDLLGHKDYV-RCGDCSPVNDSMLVTGSYDHTVKV 205
Query: 312 WKESGEWTKLYEYTGHESSVNSVAWAPAEYGLI 410
W + H V V + P+ GLI
Sbjct: 206 WDARVHTSNWIAEINHGLPVEDVVYLPSG-GLI 237
>At2g22040.1 68415.m02617 transducin family protein / WD-40 repeat
family protein similar to Pop3 (GI:3434986)
[Schizosaccharomyces pombe]; contains Pfam PF00400: WD
domain, G-beta repeat (6 copies, 2 weak);
Length = 312
Score = 31.5 bits (68), Expect = 0.39
Identities = 13/45 (28%), Positives = 24/45 (53%)
Frame = +3
Query: 69 LNTIDTGHEDMIHDAELDYYGLKLATCSSDNSVKIYDIKNGTQTL 203
L + TGHE + D + G L T SSD + +++ ++ G + +
Sbjct: 251 LEKVLTGHERWVWDCDFSMDGEYLVTASSDTTARLWSMRAGKEEM 295
Score = 29.5 bits (63), Expect = 1.6
Identities = 23/71 (32%), Positives = 37/71 (52%), Gaps = 1/71 (1%)
Frame = +3
Query: 138 LATCSSDNSVKIYDIKNGTQTLAADLKGHFGPVWQVAWAHPKYGNLLASCSYDRKVIIWK 317
LAT SSD +VKI+++ +G + L L GH VW ++ G L + S D +W
Sbjct: 232 LATASSDKTVKIWNL-DGFK-LEKVLTGHERWVWDCDFSMD--GEYLVTASSDTTARLWS 287
Query: 318 -ESGEWTKLYE 347
+G+ +Y+
Sbjct: 288 MRAGKEEMVYQ 298
>At1g73720.1 68414.m08536 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to Will die slowly protein
(SP:Q9V3J8)[Drosophila melanogaster]
Length = 511
Score = 31.5 bits (68), Expect = 0.39
Identities = 33/120 (27%), Positives = 56/120 (46%), Gaps = 1/120 (0%)
Frame = +3
Query: 90 HEDMIHDAELDYYGLKLATCSSDNSVKIYDIKNGTQTLAADLKGHFGPVWQVAWAHPKYG 269
H+D + + LA+ S D +KI+ I+ G D H V ++++ + G
Sbjct: 262 HDDPVLCIDFSRDSEMLASGSQDGKIKIWRIRTGVCIRRFD--AHSQGVTSLSFS--RDG 317
Query: 270 NLLASCSYDRKV-IIWKESGEWTKLYEYTGHESSVNSVAWAPAEYGLILACCSSDGSISI 446
+ L S S+D+ I +SG+ K E+ GH S VN + +I A SSD ++ +
Sbjct: 318 SQLLSTSFDQTARIHGLKSGKLLK--EFRGHTSYVNHAIFTSDGSRIITA--SSDCTVKV 373
Score = 29.5 bits (63), Expect = 1.6
Identities = 30/127 (23%), Positives = 51/127 (40%), Gaps = 4/127 (3%)
Frame = +3
Query: 87 GHEDMIHDAELDYYGLKLATCSSDNSVKIYDIK--NGTQTL--AADLKGHFGPVWQVAWA 254
GH ++ A G ++ T SSD +VK++D K + QT L+G V +
Sbjct: 345 GHTSYVNHAIFTSDGSRIITASSDCTVKVWDSKTTDCLQTFKPPPPLRGTDASVNSI-HL 403
Query: 255 HPKYGNLLASCSYDRKVIIWKESGEWTKLYEYTGHESSVNSVAWAPAEYGLILACCSSDG 434
PK + C+ + I G+ K + +G+ + VA + G + C D
Sbjct: 404 FPKNTEHIVVCNKTSSIYIMTLQGQVVKSFS-SGNREGGDFVAACVSTKGDWIYCIGEDK 462
Query: 435 SISIIQY 455
+ Y
Sbjct: 463 KLYCFNY 469
>At3g27640.1 68416.m03452 transducin family protein / WD-40 repeat
family protein contains seven WD-40 G-protein beta
repeats; similar to RA-regulated nuclear
matrix-associated protein (GI:14161320) {Homo sapiens}
Length = 535
Score = 31.1 bits (67), Expect = 0.51
Identities = 17/60 (28%), Positives = 28/60 (46%)
Frame = +3
Query: 267 GNLLASCSYDRKVIIWKESGEWTKLYEYTGHESSVNSVAWAPAEYGLILACCSSDGSISI 446
G + S S D IW+ + GH+ V +V W+P+E G + A S D ++ +
Sbjct: 350 GEYVLSGSSDGNAYIWQVNKPQVDPIILKGHDFEVTAVDWSPSEIGKV-ATASDDFTVRL 408
>At4g25440.1 68417.m03663 WD-40 repeat family protein / zfwd1
protein (ZFWD1) identical to zfwd1 protein (GI:12057164)
[Arabidopsis thaliana]
Length = 430
Score = 30.7 bits (66), Expect = 0.68
Identities = 18/56 (32%), Positives = 29/56 (51%)
Frame = +3
Query: 63 TVLNTIDTGHEDMIHDAELDYYGLKLATCSSDNSVKIYDIKNGTQTLAADLKGHFG 230
++L +D GH+ ++ L KL T S D +V+I+D +G T +L G G
Sbjct: 135 SLLTQLD-GHQKVVTGIALPSGSDKLYTASKDETVRIWDCASGQCTGVLNLGGEVG 189
Score = 29.1 bits (62), Expect = 2.1
Identities = 28/107 (26%), Positives = 43/107 (40%), Gaps = 3/107 (2%)
Frame = +3
Query: 135 KLATCSSDNSVKIYDIKNGTQTLAADLKGHFGPVWQ-VAWAHPKYGNLLASCSYDRKVII 311
+L + + DNS+K++ + N Q + L H V + W L SCS D V I
Sbjct: 279 RLYSGAMDNSIKVWSLDN-LQCIQT-LTEHTSVVMSLICW-----DQFLLSCSLDNTVKI 331
Query: 312 W--KESGEWTKLYEYTGHESSVNSVAWAPAEYGLILACCSSDGSISI 446
W E G Y + + AE +L C +D S+ +
Sbjct: 332 WAATEGGNLEVTYTHKEEYGVLALCGVHDAEAKPVLLCSCNDNSLHL 378
>At2g46340.1 68415.m05768 phytochrome A supressor spa1 (SPA1)
identical to phytochrome A supressor spa1 (GI:4809171)
[Arabidopsis thaliana]; contains 8 WD-40 repeats (Pfam
PF00400) (1 weak)
Length = 1029
Score = 30.7 bits (66), Expect = 0.68
Identities = 16/43 (37%), Positives = 24/43 (55%)
Frame = +3
Query: 270 NLLASCSYDRKVIIWKESGEWTKLYEYTGHESSVNSVAWAPAE 398
N LAS YD V IW ++G +YT H+ SV ++P++
Sbjct: 779 NYLASTDYDGVVQIW-DAGTGQGFSQYTEHQKRAWSVDFSPSD 820
>At1g78070.2 68414.m09098 WD-40 repeat family protein contains Pfam
profile PF00400: WD domain, G-beta repeat
Length = 447
Score = 30.7 bits (66), Expect = 0.68
Identities = 22/62 (35%), Positives = 34/62 (54%), Gaps = 10/62 (16%)
Frame = +3
Query: 81 DTGHEDMIHDAE--LDYY--------GLKLATCSSDNSVKIYDIKNGTQTLAADLKGHFG 230
DTG +IH E LDY G LAT + D + +++D++N +Q+L LKG+ G
Sbjct: 305 DTGSGKVIHGLEGHLDYSFSSAWHPNGQILATGNQDTTCRLWDVRNLSQSLKV-LKGNMG 363
Query: 231 PV 236
+
Sbjct: 364 AI 365
>At3g10530.1 68416.m01264 transducin family protein / WD-40 repeat
family protein contains 2 WD-40 repeats (PF00400); BING4
(gi:3811380) {Mus musculus]; similar to hypothetical
protein GB:P40055 [Saccharomyces cerevisiae]
Length = 536
Score = 30.3 bits (65), Expect = 0.89
Identities = 17/44 (38%), Positives = 26/44 (59%)
Frame = +3
Query: 183 KNGTQTLAADLKGHFGPVWQVAWAHPKYGNLLASCSYDRKVIIW 314
K +Q ++ H GPV VA+ HP G+L+A+ +RK+ IW
Sbjct: 267 KPTSQAPLVQMQCHPGPVSSVAF-HPN-GHLMATSGKERKIKIW 308
>At5g56090.1 68418.m06998 cytochrome oxidase assembly family protein
contains PF02628: Cytochrome oxidase assembly protein
Length = 457
Score = 29.9 bits (64), Expect = 1.2
Identities = 12/33 (36%), Positives = 17/33 (51%)
Frame = -3
Query: 445 IEIEPSELQQARIKPYSAGAHATEFTELSCPVY 347
+E PSE Q R+ PY AH T + C ++
Sbjct: 235 LEEPPSEYSQPRVSPYRLAAHLTSAFAIYCGLF 267
>At5g05970.1 68418.m00661 transducin family protein / WD-40 repeat
family protein contains similarity to regulatory protein
Nedd1; contains Pfam PF00400: WD domain, G-beta repeat
(6 copies, 2 weak)|19804256|gb|AV785466.1|AV785466
Length = 781
Score = 29.9 bits (64), Expect = 1.2
Identities = 18/78 (23%), Positives = 37/78 (47%), Gaps = 2/78 (2%)
Frame = +3
Query: 135 KLATCSSDNSVKIYDIK--NGTQTLAADLKGHFGPVWQVAWAHPKYGNLLASCSYDRKVI 308
+L S ++VK++D+ +G + + V V W H ++AS D+K+
Sbjct: 11 RLLAASGGDTVKLFDVSADSGDPCVLSYTPSPGCAVNSVKWNHTNL--VVASTGEDKKIS 68
Query: 309 IWKESGEWTKLYEYTGHE 362
+W+++G+ TG +
Sbjct: 69 LWRKNGQSLGTVPVTGKD 86
>At4g03020.1 68417.m00410 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
similar to L. erythrorhizon LEC14B, GenBank accession
number Q40153
Length = 493
Score = 29.9 bits (64), Expect = 1.2
Identities = 22/78 (28%), Positives = 36/78 (46%)
Frame = +3
Query: 81 DTGHEDMIHDAELDYYGLKLATCSSDNSVKIYDIKNGTQTLAADLKGHFGPVWQVAWAHP 260
D G+ I + G ++ SSD+S+ +YD++ +L H V V +A
Sbjct: 225 DGGYSFGIFSVKFSTDGREVVAGSSDDSIYVYDLEANRVSLRT--VAHTSDVNTVCFA-D 281
Query: 261 KYGNLLASCSYDRKVIIW 314
+ GNL+ S S D +W
Sbjct: 282 ESGNLILSGSDDNLCKVW 299
>At1g49540.1 68414.m05553 transducin family protein / WD-40 repeat
family protein similar to signal transducer and
activator of transcription interacting protein 1
(GI:15929722) {Mus musculus}; similar to hypothetical
protein GB:AAD43147 GI:5430747 from (Arabidopsis
thaliana); contains Pfam PF00400: WD domain, G-beta
repeat (11 copies, 2 weak)
Length = 840
Score = 29.9 bits (64), Expect = 1.2
Identities = 19/94 (20%), Positives = 41/94 (43%), Gaps = 9/94 (9%)
Frame = +3
Query: 276 LASCSYDRKVIIW---KESGEWTKLY---EYTGHESSVNSVAWAPAEYGLILACCSSDGS 437
+ S S D+ ++IW K++G W + E + W+P ++ G+
Sbjct: 332 ILSASMDKTMMIWRPEKKTGVWVNVVCVGELSHCALGFYGGHWSPNSLSILAH--GYGGA 389
Query: 438 ISI---IQYSQDTGNWDVKKITGAHAIGVNSISW 530
+ + S+++ NW ++K+ H V ++W
Sbjct: 390 FHLWRNVSSSKESENWQMQKVPSGHFAAVTDVTW 423
Score = 27.1 bits (57), Expect = 8.3
Identities = 19/60 (31%), Positives = 25/60 (41%), Gaps = 1/60 (1%)
Frame = +3
Query: 297 RKVIIWKESGEWTKLYEYTGHESSVNSVAWAPAEYGLILACCSSDGSISIIQ-YSQDTGN 473
R V KES W +GH ++V V W A G L S D + + + D GN
Sbjct: 394 RNVSSSKESENWQMQKVPSGHFAAVTDVTW--ARTGEYLLSVSQDQTTRVFSAWKNDEGN 451
>At5g50120.1 68418.m06207 transducin family protein / WD-40 repeat
family protein Similar to En/Spm-like transposon protein
(gi:2739374)[Arabidopsis thaliana]; similar to
GTP-binding regulatory protein and WD-repeat protein;
contains 7 WD-40 repeats
Length = 388
Score = 29.5 bits (63), Expect = 1.6
Identities = 28/94 (29%), Positives = 49/94 (52%), Gaps = 7/94 (7%)
Frame = +3
Query: 267 GNLLASCSYDRKVIIWKESGEWTKLYEYT-GHESSVNSVAWAPAEYGLILACCSSDGSIS 443
G LL S S+DR + IW+ + ++ L +T H+ ++N+VA +E G I SSD I
Sbjct: 177 GTLLYSVSWDRTLKIWRTT-DFKCLESFTNAHDDAINAVAL--SENGDIYT-GSSDQRIK 232
Query: 444 IIQYSQDTGNWDVKK------ITGAHAIGVNSIS 527
+ + + + N K+ I H G+N+++
Sbjct: 233 VWRKNINEENVKKKRKHSLVAILSEHNSGINALA 266
>At5g15550.2 68418.m01821 transducin family protein / WD-40 repeat
family protein similar to YTM1 - Homo sapiens,
EMBL:AF242546; contains Pfam PF00400: WD domain, G-beta
repeat (7 copies,1 weak);
Length = 402
Score = 29.5 bits (63), Expect = 1.6
Identities = 23/83 (27%), Positives = 35/83 (42%), Gaps = 1/83 (1%)
Frame = +3
Query: 69 LNTIDTGHEDMIHDAELDYYGLKLATCSSDNSVKIYDI-KNGTQTLAADLKGHFGPVWQV 245
LNT+D G E +A SD ++++D K GT H +
Sbjct: 315 LNTVDVGGES----------SALIAAGGSDPILRVWDPRKPGTSAPVFQFSSHSSWISAC 364
Query: 246 AWAHPKYGNLLASCSYDRKVIIW 314
W + +LL S SYD K+++W
Sbjct: 365 KWHKSSWFHLL-SASYDGKIMLW 386
>At3g13340.1 68416.m01679 WD-40 repeat family protein contains Pfam
profile: PF00400 WD domain, G-beta repeat (3 copies, 1
significant); similar to Trp-Asp repeat protein
(PIR:T40094) [Schizosaccharomyces]
Length = 447
Score = 29.5 bits (63), Expect = 1.6
Identities = 14/56 (25%), Positives = 31/56 (55%)
Frame = +3
Query: 84 TGHEDMIHDAELDYYGLKLATCSSDNSVKIYDIKNGTQTLAADLKGHFGPVWQVAW 251
+GH D + G+ +T + D + +++DI+N +Q++ LKG+ G + + +
Sbjct: 316 SGHLDFSFASAWHPDGVTFSTGNQDKTCRVWDIRNLSQSVTV-LKGNLGAIRSIRY 370
>At2g46290.1 68415.m05758 eukaryotic translation initiation factor 3
subunit 2, putative / eIF-3 beta, putative / eIF3i,
putative strong similarity to SP|Q38884 Eukaryotic
translation initiation factor 3 subunit 2 (eIF-3 beta)
(eIF3 p36) (eIF3i) (TGF-beta receptor interacting
protein 1) (TRIP-1) {Arabidopsis thaliana}; contains
Pfam PF00400: WD domain, G-beta repeat (5
copies)|19799885|gb|AU231175.1|AU231175
Length = 355
Score = 29.5 bits (63), Expect = 1.6
Identities = 18/54 (33%), Positives = 30/54 (55%), Gaps = 1/54 (1%)
Frame = +3
Query: 213 LKGHFGPVWQVAWAHPKYGNLLASCSYDRKVIIW-KESGEWTKLYEYTGHESSV 371
+KGH P+ + + + G+LL SC+ D +W ++GE +L Y GH +V
Sbjct: 33 MKGHERPLTFLRYN--RNGDLLFSCAKDHTPTVWFADNGE--RLGTYRGHSGAV 82
Score = 27.1 bits (57), Expect = 8.3
Identities = 10/37 (27%), Positives = 21/37 (56%)
Frame = +3
Query: 87 GHEDMIHDAELDYYGLKLATCSSDNSVKIYDIKNGTQ 197
GH + ++ +L T S+D + K++D+K+G +
Sbjct: 77 GHSGAVWCCDISRDSSRLITGSADQTAKLWDVKSGKE 113
>At1g27840.1 68414.m03412 transducin family protein / WD-40 repeat
family protein contains similarity to cockayne syndrome
complementation group A protein GB:U28413 GI:975301 from
[Homo sapiens]; confirmed by cDNA gi:1598289
Length = 450
Score = 29.5 bits (63), Expect = 1.6
Identities = 14/48 (29%), Positives = 28/48 (58%), Gaps = 2/48 (4%)
Frame = +3
Query: 66 VLNTID--TGHEDMIHDAELDYYGLKLATCSSDNSVKIYDIKNGTQTL 203
+L+T+D T H + + G+ L + SD+ ++++DI++G TL
Sbjct: 301 MLSTLDRATAHYGAVTGLKATNDGMYLLSAGSDSRIRLWDIESGRNTL 348
>At1g04510.1 68414.m00442 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
similar to cell cycle control protein cwf8 (SP:O14011)
[Schizosaccharomyces pombe (Fission yeast)]
Length = 523
Score = 29.5 bits (63), Expect = 1.6
Identities = 20/62 (32%), Positives = 35/62 (56%)
Frame = +3
Query: 129 GLKLATCSSDNSVKIYDIKNGTQTLAADLKGHFGPVWQVAWAHPKYGNLLASCSYDRKVI 308
GL L T ++ + VKI+D+K +Q A GH G + ++++ + G LA+ + D V
Sbjct: 366 GLILGTGTAQSIVKIWDVK--SQANVAKFGGHNGEITSISFS--ENGYFLATAALD-GVR 420
Query: 309 IW 314
+W
Sbjct: 421 LW 422
>At3g17500.1 68416.m02235 F-box family protein contains Pfam
profile: PF00646 F-box domain
Length = 438
Score = 29.1 bits (62), Expect = 2.1
Identities = 22/77 (28%), Positives = 35/77 (45%), Gaps = 1/77 (1%)
Frame = +3
Query: 132 LKLATCS-SDNSVKIYDIKNGTQTLAADLKGHFGPVWQVAWAHPKYGNLLASCSYDRKVI 308
L L C S SV + +I N + +LKG GP Q++ G LL + DR +
Sbjct: 55 LMLKDCRVSSVSVNLNEIHNNIAAPSIELKGVVGPQMQISGIFHCDGLLLCTTKDDR-LE 113
Query: 309 IWKESGEWTKLYEYTGH 359
+W T+ +++ H
Sbjct: 114 VWNPCTGQTRRVQHSIH 130
>At1g19485.1 68414.m02427 AT hook motif-containing protein contains
Pfam profile: PF00730 HhH-GPD superfamily base excision
DNA repair protein; contains Pfam PF02178: AT hook
motif; contains Pfam PF00400: WD domain, G-beta repeat
(5 copies); contains Prosite PS00354: HMG-I and HMG-Y
DNA-binding domain (A+T-hook)
Length = 815
Score = 29.1 bits (62), Expect = 2.1
Identities = 18/47 (38%), Positives = 27/47 (57%), Gaps = 5/47 (10%)
Frame = +3
Query: 273 LLASCSYDRKVIIWK----ESGEWTK-LYEYTGHESSVNSVAWAPAE 398
LLA C +D V +WK +S E T+ L ++ + + +VAWAP E
Sbjct: 452 LLAGC-HDGTVALWKFSTTKSSEDTRPLLFFSADTAPIRAVAWAPGE 497
>At3g42660.1 68416.m04436 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400); AND-1
protein - Homo sapiens, EMBL:AJ006266
Length = 951
Score = 28.7 bits (61), Expect = 2.7
Identities = 38/162 (23%), Positives = 70/162 (43%), Gaps = 4/162 (2%)
Frame = +3
Query: 63 TVLNTIDTGHEDMIHDAELDYYGLKLATCSSDNSVKIYDIKNGTQTLAADLKGHFGPVWQ 242
T+ TI H+D + L LA+ S D+ VK+Y +G ++ P+
Sbjct: 52 TLPPTILRHHQDGVTSLALSNDSTLLASGSIDHCVKLYKFPSG--EFQTNITRFTLPIRV 109
Query: 243 VAWAHPKYGNLLASCSYDRKV-IIWKESGEWTKLYEYTGHESSVNSVAWAPAEYGLILAC 419
+A+ G+LLA+ D + +I G ++ + GH+ V + + P G +LA
Sbjct: 110 LAFNGS--GSLLAAAGDDEGIKLINTFDGSIVRVLK--GHKGPVTGLDFHP--NGELLAS 163
Query: 420 CSSDGSISIIQYSQDTGNWDVKKI---TGAHAIGVNSISWCP 536
+ G++ + ++ +K + TG + VN W P
Sbjct: 164 IDTTGTVLCWELQNGVVSFTLKGVAPDTGFNTSIVNIPRWSP 205
>At1g15440.2 68414.m01856 transducin family protein / WD-40 repeat
family protein Strong similarity to gb X95263 Periodic
tryptophan protein 2 gene (PWP2) from Homo sapiens and
contains 6 WD40, G-beta repeat domains
Length = 860
Score = 28.7 bits (61), Expect = 2.7
Identities = 31/133 (23%), Positives = 53/133 (39%)
Frame = +3
Query: 138 LATCSSDNSVKIYDIKNGTQTLAADLKGHFGPVWQVAWAHPKYGNLLASCSYDRKVIIWK 317
LAT + DN VK++++ +GT + H V + + + L S S D V W
Sbjct: 364 LATGADDNKVKVWNVMSGTCFIT--FTEHTNAVTALHFMADNHS--LLSASLDGTVRAW- 418
Query: 318 ESGEWTKLYEYTGHESSVNSVAWAPAEYGLILACCSSDGSISIIQYSQDTGNWDVKKITG 497
+ + YT + A+ + C + S I +S+ TG +K I
Sbjct: 419 DFKRYKNYKTYT--TPTPRQFVSLTADPSGDVVCAGTLDSFEIFVWSKKTG--QIKDILS 474
Query: 498 AHAIGVNSISWCP 536
H V+ + + P
Sbjct: 475 GHEAPVHGLMFSP 487
>At1g15440.1 68414.m01855 transducin family protein / WD-40 repeat
family protein Strong similarity to gb X95263 Periodic
tryptophan protein 2 gene (PWP2) from Homo sapiens and
contains 6 WD40, G-beta repeat domains
Length = 900
Score = 28.7 bits (61), Expect = 2.7
Identities = 31/133 (23%), Positives = 53/133 (39%)
Frame = +3
Query: 138 LATCSSDNSVKIYDIKNGTQTLAADLKGHFGPVWQVAWAHPKYGNLLASCSYDRKVIIWK 317
LAT + DN VK++++ +GT + H V + + + L S S D V W
Sbjct: 404 LATGADDNKVKVWNVMSGTCFIT--FTEHTNAVTALHFMADNHS--LLSASLDGTVRAW- 458
Query: 318 ESGEWTKLYEYTGHESSVNSVAWAPAEYGLILACCSSDGSISIIQYSQDTGNWDVKKITG 497
+ + YT + A+ + C + S I +S+ TG +K I
Sbjct: 459 DFKRYKNYKTYT--TPTPRQFVSLTADPSGDVVCAGTLDSFEIFVWSKKTG--QIKDILS 514
Query: 498 AHAIGVNSISWCP 536
H V+ + + P
Sbjct: 515 GHEAPVHGLMFSP 527
>At5g58760.1 68418.m07360 transducin family protein / WD-40 repeat
family protein contains 4 WD-40 repeats (PF00400);
damage-specific DNA binding protein 2 (GI:10798819)
[Homo sapiens]
Length = 557
Score = 28.3 bits (60), Expect = 3.6
Identities = 17/73 (23%), Positives = 31/73 (42%)
Frame = +3
Query: 255 HPKYGNLLASCSYDRKVIIWKESGEWTKLYEYTGHESSVNSVAWAPAEYGLILACCSSDG 434
HP N+L S ++ +W + K H VN++ ++P ++ + SSDG
Sbjct: 180 HPTKNNILLSGDKKGQIGVWDFGKVYEKNVYGNIHSVQVNNMRFSPTNDDMVYS-ASSDG 238
Query: 435 SISIIQYSQDTGN 473
+I T +
Sbjct: 239 TIGYTDLETGTSS 251
>At4g28450.1 68417.m04071 transducin family protein / WD-40 repeat
family protein SOF1 (involved in rRNA processing)
protein-yeast
Length = 442
Score = 28.3 bits (60), Expect = 3.6
Identities = 21/77 (27%), Positives = 35/77 (45%), Gaps = 1/77 (1%)
Frame = +3
Query: 87 GHEDMIHDAELDYYGLK-LATCSSDNSVKIYDIKNGTQTLAADLKGHFGPVWQVAWAHPK 263
GH D + + LK + + S D ++++DI + + GH G V + +
Sbjct: 54 GHRDGVSCMAKNPNYLKGIFSASMDGDIRLWDISS--RRTVCQFPGHQGAVRGLTASTD- 110
Query: 264 YGNLLASCSYDRKVIIW 314
GN+L SC D V +W
Sbjct: 111 -GNVLVSCGTDCTVRLW 126
>At3g13290.1 68416.m01673 transducin family protein / WD-40 repeat
family protein contains 2 WD-40 repeats (PF00400);
autoantigen locus HUMAUTANT (GI:533202) [Homo sapiens]
and autoantigen locus HSU17474 (GI:596134) [Homo
sapiens]
Length = 1322
Score = 28.3 bits (60), Expect = 3.6
Identities = 21/67 (31%), Positives = 34/67 (50%), Gaps = 2/67 (2%)
Frame = +3
Query: 162 SVKIYDIKNGTQTLAADLKGHFGPVWQVAWAHPKYGNLLASCSYDRKVIIWK--ESGEWT 335
S+++ +I ++L +GH V +A+ +LLAS S D KV +WK E E
Sbjct: 203 SIRVLNINTALRSL---FRGHSQRVTDMAFFAEDV-HLLASVSLDGKVFVWKISEGSEGD 258
Query: 336 KLYEYTG 356
+ + TG
Sbjct: 259 EQSQITG 265
>At1g47610.1 68414.m05288 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to En/Spm-like transposon protein (GI:2739374)
[Arabidopsis thaliana]
Length = 351
Score = 28.3 bits (60), Expect = 3.6
Identities = 14/40 (35%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
Frame = +3
Query: 267 GNLLASCSYDRKVIIWKESGE-WTKLYEYTGHESSVNSVA 383
G LL S + D+K+ +W+ G+ T + TGH V +A
Sbjct: 276 GKLLFSGAADKKICVWRREGKVHTCVSVLTGHTGPVKCLA 315
Score = 27.1 bits (57), Expect = 8.3
Identities = 17/58 (29%), Positives = 31/58 (53%)
Frame = +3
Query: 273 LLASCSYDRKVIIWKESGEWTKLYEYTGHESSVNSVAWAPAEYGLILACCSSDGSISI 446
LL S S+DR V +W+ + + H+ +VNSV A + ++ S+DG++ +
Sbjct: 149 LLYSASWDRTVKVWR-IHDLKCIESIKAHDDAVNSVTTAES----LVFTGSADGTVKV 201
>At1g55680.1 68414.m06374 WD-40 repeat family protein contains 2 (1
significant) WD-40 repeats (PF0400); similar to Trp-Asp
repeat protein (PIR:T40094) [Schizosaccharomyces]
Length = 445
Score = 27.9 bits (59), Expect = 4.8
Identities = 13/56 (23%), Positives = 31/56 (55%)
Frame = +3
Query: 84 TGHEDMIHDAELDYYGLKLATCSSDNSVKIYDIKNGTQTLAADLKGHFGPVWQVAW 251
+GH D + G +T + D + +++DI+N ++++A L+G+ G + + +
Sbjct: 314 SGHLDFSFASAWHPDGFTFSTGNQDKTCRVWDIRNLSKSVAV-LRGNLGAIRSIRY 368
>At5g15170.1 68418.m01777 tyrosyl-DNA phosphodiesterase-related
similar to Chain A, Crystal Structure Of Human
Tyrosyl-Dna Phosphodiesterase (Tdp1) [Homo sapiens]
GI:20150581
Length = 605
Score = 27.5 bits (58), Expect = 6.3
Identities = 13/45 (28%), Positives = 20/45 (44%)
Frame = +3
Query: 168 KIYDIKNGTQTLAADLKGHFGPVWQVAWAHPKYGNLLASCSYDRK 302
K +D + T L A + G+ W H K +L C +DR+
Sbjct: 323 KKFDYSDATVRLIASVPGYHTGFNLNKWGHMKLRTILQECIFDRE 367
>At4g38480.1 68417.m05438 transducin family protein / WD-40 repeat
family protein contains contains Pfam PF00400: WD
domain, G-beta repeat (7 copies, 3 weak);similar to gene
PC326 protein - mouse, PIR2:S37694
Length = 471
Score = 27.5 bits (58), Expect = 6.3
Identities = 14/42 (33%), Positives = 23/42 (54%)
Frame = +3
Query: 267 GNLLASCSYDRKVIIWKESGEWTKLYEYTGHESSVNSVAWAP 392
G++L S S DR+VI+W KL +GH +++ + P
Sbjct: 67 GDILLSGSDDRQVILWDWQTASVKLSFDSGHFNNIFQAKFMP 108
>At3g23950.1 68416.m03008 F-box family protein contains Pfam:PF00646
F-box domain
Length = 418
Score = 27.5 bits (58), Expect = 6.3
Identities = 9/36 (25%), Positives = 18/36 (50%)
Frame = +3
Query: 399 YGLILACCSSDGSISIIQYSQDTGNWDVKKITGAHA 506
Y ++ + + YS +TG W++K +T H+
Sbjct: 170 YKVVWLIAHTFAQVDFAIYSSNTGEWEIKNVTCLHS 205
>At3g05090.2 68416.m00553 transducin family protein / WD-40 repeat
family protein contains seven G-protein beta WD-40
repeats; similar to uncharacterized KIAA1449 protein
(gi:7959157) [Homo sapiens]
Length = 753
Score = 27.5 bits (58), Expect = 6.3
Identities = 17/63 (26%), Positives = 30/63 (47%)
Frame = +3
Query: 87 GHEDMIHDAELDYYGLKLATCSSDNSVKIYDIKNGTQTLAADLKGHFGPVWQVAWAHPKY 266
GH D + LD G + SSD+ ++++D+ G Q H VW +A +P +
Sbjct: 253 GHTDNVRVLLLDSTGRFCLSGSSDSMIRLWDL--GQQRCLHTYAVHTDSVWALA-CNPSF 309
Query: 267 GNL 275
++
Sbjct: 310 SHV 312
>At3g05090.1 68416.m00552 transducin family protein / WD-40 repeat
family protein contains seven G-protein beta WD-40
repeats; similar to uncharacterized KIAA1449 protein
(gi:7959157) [Homo sapiens]
Length = 753
Score = 27.5 bits (58), Expect = 6.3
Identities = 17/63 (26%), Positives = 30/63 (47%)
Frame = +3
Query: 87 GHEDMIHDAELDYYGLKLATCSSDNSVKIYDIKNGTQTLAADLKGHFGPVWQVAWAHPKY 266
GH D + LD G + SSD+ ++++D+ G Q H VW +A +P +
Sbjct: 253 GHTDNVRVLLLDSTGRFCLSGSSDSMIRLWDL--GQQRCLHTYAVHTDSVWALA-CNPSF 309
Query: 267 GNL 275
++
Sbjct: 310 SHV 312
>At1g29320.1 68414.m03584 transducin family protein / WD-40 repeat
family protein contains 3 WD-40 repeats (PF00400);
similar to meiotic recombination protein REC14
(GI:11139242) [Homo sapiens]; similar to unknown protein
GI:13623493 [Homo sapiens]
Length = 468
Score = 27.5 bits (58), Expect = 6.3
Identities = 17/70 (24%), Positives = 33/70 (47%), Gaps = 3/70 (4%)
Frame = +3
Query: 138 LATCSSDNSVKIYDIKNGTQTLAADLKGHF-GPVWQVAWA--HPKYGNLLASCSYDRKVI 308
+A+C D +++YD+K A LK H G V+ ++ N +A + + K+
Sbjct: 317 IASCGLDRYLRVYDVKTRQLISAVFLKQHLTGLVFDSGFSGEETAVANTVAEAATEEKMT 376
Query: 309 IWKESGEWTK 338
I + + T+
Sbjct: 377 IMDQEDDETE 386
>At5g51980.1 68418.m06451 WD-40 repeat family protein / zfwd2
protein (ZFWD2), putative 99.8% identical to zfwd2
protein (GI:12057166) [Arabidopsis thaliana]; contains 6
copies (2 weak) Pfam PF00400: WD domain, G-beta repeat;
contains Pfam PF00642: Zinc finger C-x8-C-x5-C-x3-H type
(and similar) domain
Length = 437
Score = 27.1 bits (57), Expect = 8.3
Identities = 26/107 (24%), Positives = 42/107 (39%), Gaps = 3/107 (2%)
Frame = +3
Query: 135 KLATCSSDNSVKIYDIKNGTQTLAADLKGHFGPVWQ-VAWAHPKYGNLLASCSYDRKVII 311
+L + S D ++K++ + N Q + L H V + W L SCS D V I
Sbjct: 286 RLYSGSMDKTIKVWSLDN-LQCIQT-LTDHSSVVMSLICW-----DQFLLSCSLDNTVKI 338
Query: 312 WK--ESGEWTKLYEYTGHESSVNSVAWAPAEYGLILACCSSDGSISI 446
W E G Y + + AE +L C +D ++ +
Sbjct: 339 WAAIEGGNLEVTYTHKEEHGVLALCGVHDAEAKPVLLCACNDNTLRL 385
>At5g06820.1 68418.m00771 leucine-rich repeat transmembrane protein
kinase, putative
Length = 735
Score = 27.1 bits (57), Expect = 8.3
Identities = 14/35 (40%), Positives = 20/35 (57%), Gaps = 3/35 (8%)
Frame = +3
Query: 318 ESGEWTKLYEYTGHESSVNSV---AWAPAEYGLIL 413
E+GE +YEY GH S N++ + P +GL L
Sbjct: 482 ENGEHLLVYEYVGHLSLYNAMHDEVYKPLSWGLRL 516
>At3g44600.1 68416.m04794 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein similar to SP|P87051
Peptidyl-prolyl cis-trans isomerase cyp2 (EC 5.2.1.8)
(Cyclophilin cyp2) {Schizosaccharomyces pombe}; contains
Pfam profiles PF00160: peptidyl-prolyl cis-trans
isomerase cyclophilin-type, PF00400: WD domain G-beta
repeat
Length = 631
Score = 27.1 bits (57), Expect = 8.3
Identities = 11/20 (55%), Positives = 15/20 (75%)
Frame = +3
Query: 129 GLKLATCSSDNSVKIYDIKN 188
GL T S+D++VKIYD+ N
Sbjct: 125 GLLCCTISNDHAVKIYDVVN 144
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,883,159
Number of Sequences: 28952
Number of extensions: 236231
Number of successful extensions: 1033
Number of sequences better than 10.0: 149
Number of HSP's better than 10.0 without gapping: 739
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 925
length of database: 12,070,560
effective HSP length: 77
effective length of database: 9,841,256
effective search space used: 1043173136
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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