Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmov10i04
(576 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At2g31360.1 68415.m03831 delta 9 desaturase (ADS2) identical to ... 87 1e-17
At1g06080.1 68414.m00637 delta 9 desaturase (ADS1) identical to ... 83 1e-16
At1g06360.1 68414.m00672 fatty acid desaturase family protein si... 81 4e-16
At3g15850.1 68416.m02005 fatty acid desaturase family protein si... 79 2e-15
At3g15870.1 68416.m02007 fatty acid desaturase family protein si... 77 6e-15
At1g06090.1 68414.m00638 fatty acid desaturase family protein si... 75 3e-14
At1g06120.1 68414.m00641 fatty acid desaturase family protein si... 75 3e-14
At1g06100.1 68414.m00639 fatty acid desaturase family protein si... 72 2e-13
At1g06350.1 68414.m00671 fatty acid desaturase family protein si... 69 2e-12
At5g56860.1 68418.m07095 zinc finger (GATA type) family protein ... 31 0.73
At5g67330.1 68418.m08491 NRAMP metal ion transporter 4 (NRAMP4) ... 30 1.3
At4g19865.1 68417.m02911 kelch repeat-containing F-box family pr... 29 1.7
At3g50780.1 68416.m05561 expressed protein 29 2.2
At2g23150.1 68415.m02765 NRAMP metal ion transporter 3 (NRAMP3) ... 29 2.2
At3g10630.1 68416.m01278 glycosyl transferase family 1 protein c... 29 2.9
At3g02760.1 68416.m00268 histidyl-tRNA synthetase, putative / hi... 28 3.9
At1g47240.1 68414.m05230 NRAMP metal ion transporter 2, putative... 28 3.9
At4g01890.1 68417.m00247 glycoside hydrolase family 28 protein /... 28 5.1
At3g62090.1 68416.m06976 basic helix-loop-helix (bHLH) protein, ... 27 6.8
At5g39770.1 68418.m04817 repair endonuclease family protein cont... 27 9.0
At3g57570.1 68416.m06410 expressed protein 27 9.0
At2g13950.1 68415.m01550 DC1 domain-containing protein contains ... 27 9.0
>At2g31360.1 68415.m03831 delta 9 desaturase (ADS2) identical to
delta 9 acyl-lipid desaturase (ADS2) GI:2970036 from
[Arabidopsis thaliana]
Length = 307
Score = 86.6 bits (205), Expect = 1e-17
Identities = 47/147 (31%), Positives = 73/147 (49%), Gaps = 8/147 (5%)
Frame = +1
Query: 151 DANNLPEDAPPHVPPSAEKRPWKIV---WRNV--ILF---FILHVGGVYGGYLFLFKAMW 306
+ N+ + P +KR W WR + + F F +H + + F + A+W
Sbjct: 8 EENHQKNPSTPAAVEEKKKRRWVFWDRRWRRLDYVKFSASFTVHSLALLAPFYFTWSALW 67
Query: 307 RTSIFAIFLYLCSGLGITAGAHRLWAHKSYKARLPLRILLTIFNTIAFQDAVVDWARDHR 486
T +F Y GLGIT HR AH+S+K L LL +A Q +DW HR
Sbjct: 68 VTFLF----YTIGGLGITVSYHRNLAHRSFKVPKWLEYLLAYCALLAIQGDPIDWVSTHR 123
Query: 487 MHHKYSETDADPHNATRGFFFSHIGWL 567
HH++++++ DPH+ GF+FSH+ W+
Sbjct: 124 YHHQFTDSERDPHSPKEGFWFSHLLWI 150
>At1g06080.1 68414.m00637 delta 9 desaturase (ADS1) identical to
delta 9 acyl-lipid desaturase (ADS1) GB:BAA25180
GI:2970034 from [Arabidopsis thaliana]
Length = 305
Score = 83.4 bits (197), Expect = 1e-16
Identities = 44/144 (30%), Positives = 67/144 (46%), Gaps = 3/144 (2%)
Frame = +1
Query: 145 EADANNLPEDAPPHVPPSAEKRPWKIVWRNVILFFILHVGGVYGGYLFL---FKAMWRTS 315
E + NN A ++ W+ W+ L + ++ +L L F W
Sbjct: 7 EKEENNKKMAADKAEMGRKKRAMWERKWKR--LDIVKAFASLFVHFLCLLAPFNFTWPAL 64
Query: 316 IFAIFLYLCSGLGITAGAHRLWAHKSYKARLPLRILLTIFNTIAFQDAVVDWARDHRMHH 495
A+ +Y GLGIT HR AH+S+K L +A Q +DW HR HH
Sbjct: 65 RVALIVYTVGGLGITVSYHRNLAHRSFKVPKWLEYFFAYCGLLAIQGDPIDWVSTHRYHH 124
Query: 496 KYSETDADPHNATRGFFFSHIGWL 567
+++++D DPH+ GF+FSH+ WL
Sbjct: 125 QFTDSDRDPHSPNEGFWFSHLLWL 148
>At1g06360.1 68414.m00672 fatty acid desaturase family protein
similar to delta 9 acyl-lipid desaturase (ADS1)
GI:2970034 from [Arabidopsis thaliana]
Length = 299
Score = 81.4 bits (192), Expect = 4e-16
Identities = 43/127 (33%), Positives = 63/127 (49%), Gaps = 3/127 (2%)
Frame = +1
Query: 196 SAEKRPW---KIVWRNVILFFILHVGGVYGGYLFLFKAMWRTSIFAIFLYLCSGLGITAG 366
S EKRP+ + W ++I + + + L F W F LY + L IT
Sbjct: 17 SKEKRPYIHREWSWADIIRALTV-INVHFLCLLAPFNYKWEALRFGFVLYALTSLSITFS 75
Query: 367 AHRLWAHKSYKARLPLRILLTIFNTIAFQDAVVDWARDHRMHHKYSETDADPHNATRGFF 546
HR AH+S+K L L F A Q +DW HR HH+++++D DPH+ GF+
Sbjct: 76 YHRNLAHRSFKLPKWLEYPLAYFAVFALQGDPLDWVSIHRFHHQFTDSDRDPHSPIEGFW 135
Query: 547 FSHIGWL 567
FSH+ W+
Sbjct: 136 FSHVWWI 142
>At3g15850.1 68416.m02005 fatty acid desaturase family protein
similar to delta 9 acyl-lipid desaturase (ADS1)
GI:2970034 from [Arabidopsis thaliana]
Length = 371
Score = 79.0 bits (186), Expect = 2e-15
Identities = 36/93 (38%), Positives = 51/93 (54%), Gaps = 1/93 (1%)
Frame = +1
Query: 292 FKAMWRTSIFAIFLYLCSGL-GITAGAHRLWAHKSYKARLPLRILLTIFNTIAFQDAVVD 468
F+ WR A LY+ +GL GIT HR +HK++K L L A Q +D
Sbjct: 121 FQFNWRAVSVAFGLYIVTGLLGITLSFHRNLSHKAFKLPKWLEYLFAYCGAQALQGNPID 180
Query: 469 WARDHRMHHKYSETDADPHNATRGFFFSHIGWL 567
W HR HH++ ++D DPH+ GF+FSH+ W+
Sbjct: 181 WVSTHRYHHQFCDSDRDPHSPLDGFWFSHMNWM 213
>At3g15870.1 68416.m02007 fatty acid desaturase family protein
similar to delta 9 acyl-lipid desaturase (ADS1)
GI:2970034 from [Arabidopsis thaliana]
Length = 292
Score = 77.4 bits (182), Expect = 6e-15
Identities = 35/98 (35%), Positives = 55/98 (56%)
Frame = +1
Query: 274 GGYLFLFKAMWRTSIFAIFLYLCSGLGITAGAHRLWAHKSYKARLPLRILLTIFNTIAFQ 453
G L +A W +F +++ +G+ IT HR +H+S+ L L +AFQ
Sbjct: 43 GSILLQLEAFW---VFPWLVFI-NGICITLSYHRNLSHRSFDLPKWLEYLFAYGGVLAFQ 98
Query: 454 DAVVDWARDHRMHHKYSETDADPHNATRGFFFSHIGWL 567
++W +HR HHK+ ET DPH+ T+GF+FSH+ W+
Sbjct: 99 GDPIEWVSNHRYHHKHCETQRDPHSPTQGFWFSHMAWI 136
>At1g06090.1 68414.m00638 fatty acid desaturase family protein
similar to delta 9 acyl-lipid desaturase GB:BAA25180
GI:2970034 (ADS1) from [Arabidopsis thaliana]
Length = 299
Score = 75.4 bits (177), Expect = 3e-14
Identities = 32/92 (34%), Positives = 46/92 (50%)
Frame = +1
Query: 292 FKAMWRTSIFAIFLYLCSGLGITAGAHRLWAHKSYKARLPLRILLTIFNTIAFQDAVVDW 471
F W F + L + + L IT HR HKS+K L A Q +DW
Sbjct: 51 FNYKWEALRFGVILAIVTSLSITFSYHRNLTHKSFKLPKWLEYPFAYSALFALQGHPIDW 110
Query: 472 ARDHRMHHKYSETDADPHNATRGFFFSHIGWL 567
HR HH+++++D DPH+ GF+FSH+ W+
Sbjct: 111 VSTHRFHHQFTDSDRDPHSPIEGFWFSHVFWI 142
>At1g06120.1 68414.m00641 fatty acid desaturase family protein
similar to delta 9 acyl-lipid desaturase GB:BAA25180
GI:2970034 (ADS1) from [Arabidopsis thaliana]; supported
by cDNA:gi_12083275_gb_AF332434.1_AF332434
Length = 299
Score = 74.9 bits (176), Expect = 3e-14
Identities = 37/115 (32%), Positives = 55/115 (47%), Gaps = 1/115 (0%)
Frame = +1
Query: 226 WRNVILFFILHVGGVYGGYLFL-FKAMWRTSIFAIFLYLCSGLGITAGAHRLWAHKSYKA 402
W V + + VG V+ L F W FA + + + L IT HR H+S+K
Sbjct: 28 WTRVDVMRVSAVGAVHLLCLLAPFNYTWEAFRFAAMVGISTNLSITFSYHRNLTHRSFKL 87
Query: 403 RLPLRILLTIFNTIAFQDAVVDWARDHRMHHKYSETDADPHNATRGFFFSHIGWL 567
L A Q +DW HR HH+++++D DPH+ GF+FSH+ W+
Sbjct: 88 PKWLEYPFAYSALFALQGHPIDWVSTHRFHHQFTDSDRDPHSPIEGFWFSHVFWI 142
>At1g06100.1 68414.m00639 fatty acid desaturase family protein
similar to delta 9 acyl-lipid desaturase (ADS1)
GI:2970034 from [Arabidopsis thaliana]
Length = 299
Score = 72.1 bits (169), Expect = 2e-13
Identities = 32/92 (34%), Positives = 47/92 (51%)
Frame = +1
Query: 292 FKAMWRTSIFAIFLYLCSGLGITAGAHRLWAHKSYKARLPLRILLTIFNTIAFQDAVVDW 471
F W F I L + + L IT HR H+S+K L +A Q +DW
Sbjct: 51 FNYKWEAFRFGIILAILTNLCITFSYHRNLTHRSFKLPKWLEYPFAYSALLALQGDPLDW 110
Query: 472 ARDHRMHHKYSETDADPHNATRGFFFSHIGWL 567
HR HH+++++D DPH+ GF+FSH+ W+
Sbjct: 111 VSIHRFHHQFTDSDRDPHSPIEGFWFSHVLWI 142
>At1g06350.1 68414.m00671 fatty acid desaturase family protein
similar to delta 9 acyl-lipid desaturase (ADS1)
GI:2970034 from [Arabidopsis thaliana]
Length = 300
Score = 68.9 bits (161), Expect = 2e-12
Identities = 31/92 (33%), Positives = 45/92 (48%)
Frame = +1
Query: 292 FKAMWRTSIFAIFLYLCSGLGITAGAHRLWAHKSYKARLPLRILLTIFNTIAFQDAVVDW 471
F W F + L+ + L IT HR +H+S+K L A Q +DW
Sbjct: 52 FNFKWEALRFGLVLFALTTLSITFSFHRNLSHRSFKIPKWLEYPWAYSAVFALQGDPMDW 111
Query: 472 ARDHRMHHKYSETDADPHNATRGFFFSHIGWL 567
HR HH+++++D DPH+ G FSHI W+
Sbjct: 112 VSIHRFHHQFTDSDRDPHSPKEGLLFSHILWI 143
>At5g56860.1 68418.m07095 zinc finger (GATA type) family protein
similar to unknown protein (pir |T04270)
Length = 398
Score = 30.7 bits (66), Expect = 0.73
Identities = 13/29 (44%), Positives = 19/29 (65%)
Frame = -3
Query: 286 TSTLHKHHRHAE*RTESHFSTQSSKVSSL 200
+S+LH HH H + S+ S+ SS +SSL
Sbjct: 29 SSSLHHHHHHHHHQVPSNSSSSSSSISSL 57
>At5g67330.1 68418.m08491 NRAMP metal ion transporter 4 (NRAMP4)
identical to metal transporter Nramp4 [Arabidopsis
thaliana] gi|6468014|gb|AAF13279; member of the natural
resistance-associated macrophage protein (NRAMP) metal
transporter family, PMID:11500563
Length = 512
Score = 29.9 bits (64), Expect = 1.3
Identities = 12/36 (33%), Positives = 18/36 (50%)
Frame = +1
Query: 265 GVYGGYLFLFKAMWRTSIFAIFLYLCSGLGITAGAH 372
G GY ++ MW T+I + L + LG+ G H
Sbjct: 79 GAIAGYSLIWLLMWATAIGLLIQLLSARLGVATGRH 114
>At4g19865.1 68417.m02911 kelch repeat-containing F-box family
protein contains F-box domain Pfam:PF00646 and Kelch
motif Pfam:PF01344
Length = 393
Score = 29.5 bits (63), Expect = 1.7
Identities = 25/94 (26%), Positives = 43/94 (45%), Gaps = 3/94 (3%)
Frame = +1
Query: 175 APPHVPPSAEKRPWKIVWRNVILFFILHVGGVYGGYLFLFKAMWRTSIFAIFLYLC-SGL 351
+PPH PPS+ ++ +++ + + +Y L L +R+ + + LY S L
Sbjct: 17 SPPHSPPSSSSPSLSLLPEEIVVHCLARISRLYYPTLSLVSKSFRSILSSTELYATRSHL 76
Query: 352 GITAGAHR--LWAHKSYKARLPLRILLTIFNTIA 447
G T LW SY+ LR+L+ T+A
Sbjct: 77 GSTEQCVYLCLW-DPSYQFPQWLRLLVNPNRTLA 109
>At3g50780.1 68416.m05561 expressed protein
Length = 520
Score = 29.1 bits (62), Expect = 2.2
Identities = 19/68 (27%), Positives = 33/68 (48%), Gaps = 2/68 (2%)
Frame = +3
Query: 111 PKETGGFVG--IVRSRRQ*PARRCTAPCTSLSREETLEDCVEKCDSVLYSACRWCLWRVL 284
PKET + ++RS+ + R + L RE+ + + + +YS+C+ CL VL
Sbjct: 270 PKETLSRIIELVLRSKEEKSRREMKSIVLKLLREQNGANVADNFNDTIYSSCQTCLDSVL 329
Query: 285 VPFQSHVE 308
F+ E
Sbjct: 330 SLFKQASE 337
>At2g23150.1 68415.m02765 NRAMP metal ion transporter 3 (NRAMP3)
identical to metal transporter Nramp3 [Arabidopsis
thaliana] gi|6468012|gb|AAF13278; member of the natural
resistance-associated macrophage protein (NRAMP) metal
transporter family, PMID:11500563
Length = 509
Score = 29.1 bits (62), Expect = 2.2
Identities = 12/36 (33%), Positives = 18/36 (50%)
Frame = +1
Query: 265 GVYGGYLFLFKAMWRTSIFAIFLYLCSGLGITAGAH 372
G GY L+ MW T++ + L + LG+ G H
Sbjct: 83 GAVAGYSLLWLLMWATAMGLLVQLLSARLGVATGRH 118
>At3g10630.1 68416.m01278 glycosyl transferase family 1 protein
contains Pfam glycosyl transferase, group 1 family
protein domain PF00534; C-terminal portion similar to
mannosyltransferase GB:BAA28328 [Escherichia coli]
Length = 487
Score = 28.7 bits (61), Expect = 2.9
Identities = 13/27 (48%), Positives = 17/27 (62%), Gaps = 3/27 (11%)
Frame = +1
Query: 190 PPSAEKRPWK---IVWRNVILFFILHV 261
PP KRPWK IV+ + ILF +L +
Sbjct: 4 PPDRSKRPWKFSTIVYSSSILFLLLSI 30
>At3g02760.1 68416.m00268 histidyl-tRNA synthetase, putative /
histidine--tRNA ligase, putative similar to SP|P12081
Histidyl-tRNA synthetase (EC 6.1.1.21) (Histidine--tRNA
ligase) (HisRS) {Homo sapiens}; contains Pfam profiles
PF00587: tRNA synthetase class II core domain (G, H, P,
S and T), PF03129: Anticodon binding domain
Length = 479
Score = 28.3 bits (60), Expect = 3.9
Identities = 13/28 (46%), Positives = 17/28 (60%)
Frame = -3
Query: 109 EAFSLIQNIFKYCKCVVLQTAVFKKHAT 26
+AFS+IQN+FK L T VF+ T
Sbjct: 61 KAFSIIQNVFKRHGATALDTPVFELRET 88
>At1g47240.1 68414.m05230 NRAMP metal ion transporter 2, putative
(NRAMP2) similar to metal transporter Nramp3
[Arabidopsis thaliana] gi|6468012|gb|AAF13278; member of
the natural resistance-associated macrophage protein
(NRAMP) metal transporter family, PMID:11500563
Length = 530
Score = 28.3 bits (60), Expect = 3.9
Identities = 11/36 (30%), Positives = 18/36 (50%)
Frame = +1
Query: 265 GVYGGYLFLFKAMWRTSIFAIFLYLCSGLGITAGAH 372
G GY L+ MW T++ + L + +G+ G H
Sbjct: 95 GAIAGYSLLWLLMWATAMGLLIQMLSARVGVATGRH 130
>At4g01890.1 68417.m00247 glycoside hydrolase family 28 protein /
polygalacturonase (pectinase) family protein similar to
polygalacturonase [Lycopersicon esculentum] GI:7381227;
contains PF00295: Glycosyl hydrolases family 28
(polygalacturonases)
Length = 468
Score = 27.9 bits (59), Expect = 5.1
Identities = 11/34 (32%), Positives = 16/34 (47%)
Frame = +1
Query: 130 SWVLYEADANNLPEDAPPHVPPSAEKRPWKIVWR 231
S+ ++ D +P D P P S KR W +R
Sbjct: 124 SYQYFQVDGTIVPRDGPKSWPSSLNKRQWLAFYR 157
>At3g62090.1 68416.m06976 basic helix-loop-helix (bHLH) protein,
putative very strong similarity to PIF3 like basic Helix
Loop Helix protein 2 (PIL2) [Arabidopsis thaliana]
GI:22535494
Length = 346
Score = 27.5 bits (58), Expect = 6.8
Identities = 22/74 (29%), Positives = 26/74 (35%)
Frame = +3
Query: 336 LVFGIGYHSWRAQTLGTQVL*SSAATENITHHIQYYRFSGCRSGLGP*SSHAPQIFRDRC 515
L G+G Q L VL A I RF GL P + AP I + C
Sbjct: 251 LAMGVGMQMGEQQFLPAHVL--GAGLPGINDSADMLRFLN-HPGLMPMQNSAPFIPTENC 307
Query: 516 GPPQRNPRILLFPH 557
P P FP+
Sbjct: 308 SPQSVPPSCAAFPN 321
>At5g39770.1 68418.m04817 repair endonuclease family protein contains
Pfam PF02732 : ERCC4 domain; similar to MUS81
endonuclease (GI:16755674) [Mus musculus]; similar to
repair endonuclease (TIGR:At5g41150) [Arabidopsis
thaliana]
Length = 1242
Score = 27.1 bits (57), Expect = 9.0
Identities = 10/20 (50%), Positives = 14/20 (70%)
Frame = -3
Query: 142 TIPTKPPVSFGEAFSLIQNI 83
TIP PP+ FGEAF + ++
Sbjct: 979 TIPRLPPLRFGEAFEEVYDV 998
>At3g57570.1 68416.m06410 expressed protein
Length = 1057
Score = 27.1 bits (57), Expect = 9.0
Identities = 11/25 (44%), Positives = 15/25 (60%)
Frame = +2
Query: 482 IACTTNIQRPMRTPTTQPEDSSFPT 556
+A T NI + PT+ PEDS+ T
Sbjct: 232 VALTPNISEKKKRPTSLPEDSNIET 256
>At2g13950.1 68415.m01550 DC1 domain-containing protein contains
Pfam profile PF03107: DC1 domain
Length = 517
Score = 27.1 bits (57), Expect = 9.0
Identities = 16/55 (29%), Positives = 26/55 (47%)
Frame = +3
Query: 204 EETLEDCVEKCDSVLYSACRWCLWRVLVPFQSHVEDFYIRHIFVLVFGIGYHSWR 368
E T C++KC+ +L+ AC V P + H + + + V IGY +R
Sbjct: 292 EGTYYSCLDKCEFILHEAC------VNAPRKKH-HPLHTHPLTLKVVSIGYDHYR 339
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,588,624
Number of Sequences: 28952
Number of extensions: 375715
Number of successful extensions: 1078
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 1040
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1077
length of database: 12,070,560
effective HSP length: 77
effective length of database: 9,841,256
effective search space used: 1121903184
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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