Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmov10i02
         (594 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface pro...    25   0.48 
AM292339-1|CAL23151.2|  387|Tribolium castaneum gustatory recept...    23   1.5  
AM292338-1|CAL23150.2|  372|Tribolium castaneum gustatory recept...    23   1.5  

>AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface
           protein chaoptin protein.
          Length = 782

 Score = 25.0 bits (52), Expect = 0.48
 Identities = 9/26 (34%), Positives = 15/26 (57%)
 Frame = +2

Query: 383 PTDLFHNDSPTEYLDIPADDNIIIEN 460
           P D+F N  P   + +   DNI+++N
Sbjct: 655 PFDVFRNMLPVRNVSVDVRDNILLKN 680


>AM292339-1|CAL23151.2|  387|Tribolium castaneum gustatory receptor
           candidate 18 protein.
          Length = 387

 Score = 23.4 bits (48), Expect = 1.5
 Identities = 13/32 (40%), Positives = 15/32 (46%)
 Frame = +3

Query: 84  SVWNLMLKCTV*SFIHWRPIMKIS*KLTPNVL 179
           S W+   K      IHW P M IS KL  + L
Sbjct: 151 STWSKKSKQVEYFLIHWYPRMLISTKLLAHFL 182


>AM292338-1|CAL23150.2|  372|Tribolium castaneum gustatory receptor
           candidate 17 protein.
          Length = 372

 Score = 23.4 bits (48), Expect = 1.5
 Identities = 13/32 (40%), Positives = 15/32 (46%)
 Frame = +3

Query: 84  SVWNLMLKCTV*SFIHWRPIMKIS*KLTPNVL 179
           S W+   K      IHW P M IS KL  + L
Sbjct: 151 STWSKKSKQVEYFLIHWYPRMLISTKLLAHFL 182


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 129,559
Number of Sequences: 336
Number of extensions: 2641
Number of successful extensions: 5
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 14935063
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)