Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmov10i02
         (594 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

L41349-1|AAB02027.1| 1022|Homo sapiens phospholipase C beta 4 pr...    31   2.3  
X03740-1|CAA27380.1|  876|Homo sapiens protein ( Human skeletal ...    30   7.1  
BC150281-1|AAI50282.1| 1132|Homo sapiens MYT1L protein protein.        30   7.1  
AF036943-1|AAF14051.1| 1192|Homo sapiens myelin transcription fa...    30   7.1  
AB029029-1|BAA83058.2| 1154|Homo sapiens KIAA1106 protein protein.     30   7.1  

>L41349-1|AAB02027.1| 1022|Homo sapiens phospholipase C beta 4
           protein.
          Length = 1022

 Score = 31.5 bits (68), Expect = 2.3
 Identities = 24/99 (24%), Positives = 45/99 (45%), Gaps = 2/99 (2%)
 Frame = +2

Query: 194 CVCYLCAGLLKKYSRFKSKCLVAQSLFYKILKSGKKVNIESVKSLDKHYLKKSLTIYTET 373
           C    C  + + ++  K++ ++ Q+L    L SGK   IE      + + + +  I   T
Sbjct: 8   CFFLFCPSITRTFASGKTEKVIFQALKELGLPSGKNDEIEPTAFSYEKFYELTQKICPRT 67

Query: 374 DVTPTDLFH--NDSPTEYLDIPADDNIIIENEDSLEINE 484
           D+   DLF   N   T+YL +    + + E++    +NE
Sbjct: 68  DI--EDLFKKINGDKTDYLTVDQLVSFLNEHQRDPRLNE 104


>X03740-1|CAA27380.1|  876|Homo sapiens protein ( Human skeletal
           mRNA for myosin heavy chain light meromyosin region. ).
          Length = 876

 Score = 29.9 bits (64), Expect = 7.1
 Identities = 16/32 (50%), Positives = 21/32 (65%), Gaps = 1/32 (3%)
 Frame = +2

Query: 284 LKSGKKVNIESVKSLDKHYLK-KSLTIYTETD 376
           ++S +K N+E+VK L KH  K K LT  TE D
Sbjct: 767 VESEQKRNVEAVKGLHKHERKVKELTYQTEED 798


>BC150281-1|AAI50282.1| 1132|Homo sapiens MYT1L protein protein.
          Length = 1132

 Score = 29.9 bits (64), Expect = 7.1
 Identities = 16/55 (29%), Positives = 29/55 (52%)
 Frame = +2

Query: 422 LDIPADDNIIIENEDSLEINETNSEDYCNIEYLSDEDYSDLQSQLDSKELSLVHL 586
           L +  D +++ E  DSL++           E ++D +Y+D  SQ DS+ ++ V L
Sbjct: 197 LSLDLDSDVVRETVDSLKLL-AQGHGVVLSENMNDRNYADSMSQQDSRNMNYVML 250


>AF036943-1|AAF14051.1| 1192|Homo sapiens myelin transcription
           factor 1-like protein.
          Length = 1192

 Score = 29.9 bits (64), Expect = 7.1
 Identities = 16/55 (29%), Positives = 29/55 (52%)
 Frame = +2

Query: 422 LDIPADDNIIIENEDSLEINETNSEDYCNIEYLSDEDYSDLQSQLDSKELSLVHL 586
           L +  D +++ E  DSL++           E ++D +Y+D  SQ DS+ ++ V L
Sbjct: 249 LSLDLDSDVVRETVDSLKLL-AQGHGVVLSENMNDRNYADSMSQQDSRNMNYVML 302


>AB029029-1|BAA83058.2| 1154|Homo sapiens KIAA1106 protein protein.
          Length = 1154

 Score = 29.9 bits (64), Expect = 7.1
 Identities = 16/55 (29%), Positives = 29/55 (52%)
 Frame = +2

Query: 422 LDIPADDNIIIENEDSLEINETNSEDYCNIEYLSDEDYSDLQSQLDSKELSLVHL 586
           L +  D +++ E  DSL++           E ++D +Y+D  SQ DS+ ++ V L
Sbjct: 219 LSLDLDSDVVRETVDSLKLL-AQGHGVVLSENMNDRNYADSMSQQDSRNMNYVML 272


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 71,483,798
Number of Sequences: 237096
Number of extensions: 1349713
Number of successful extensions: 6986
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 6893
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6986
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 6268037466
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)