Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmov10i02
(594 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z92803-1|CAB07242.2| 384|Caenorhabditis elegans Hypothetical pr... 37 0.012
AF304126-1|AAG50239.1| 384|Caenorhabditis elegans RING and zinc... 37 0.012
Z54238-2|CAA90994.1| 200|Caenorhabditis elegans Hypothetical pr... 32 0.35
U14635-5|AAN63442.1| 464|Caenorhabditis elegans Hypothetical pr... 32 0.35
U14635-4|AAL02446.1| 459|Caenorhabditis elegans Hypothetical pr... 32 0.35
U14635-3|AAN63441.1| 491|Caenorhabditis elegans Hypothetical pr... 32 0.35
U14635-2|AAC46656.2| 522|Caenorhabditis elegans Hypothetical pr... 32 0.35
Z67882-2|CAA91799.1| 1318|Caenorhabditis elegans Hypothetical pr... 29 3.3
U64859-7|AAC69095.1| 344|Caenorhabditis elegans Serpentine rece... 28 4.4
U41007-19|AAA82274.1| 432|Caenorhabditis elegans Hypothetical p... 28 4.4
L15314-2|AAF99983.1| 322|Caenorhabditis elegans Hypothetical pr... 28 4.4
AC199239-1|ABO33277.1| 147|Caenorhabditis elegans Hypothetical ... 28 4.4
U49830-13|AAK31474.1| 826|Caenorhabditis elegans Hypothetical p... 27 7.6
AL110500-7|CAB54490.1| 489|Caenorhabditis elegans Hypothetical ... 27 7.6
>Z92803-1|CAB07242.2| 384|Caenorhabditis elegans Hypothetical
protein K01G5.1 protein.
Length = 384
Score = 36.7 bits (81), Expect = 0.012
Identities = 37/143 (25%), Positives = 59/143 (41%), Gaps = 7/143 (4%)
Frame = +2
Query: 134 ETYYED-IVEVNPECSPDLPQCVCYLCAGLLKKYSRFKSKCLVAQSLFYKILKSGKKV-- 304
+T+ ED + NP P + +C Y C G K + SKC + Q I+ + K++
Sbjct: 235 DTFPEDCFICGNPFVDPIVTKCKHYFCTGCALKSFQKSSKCPICQQNTENIMNTAKELLT 294
Query: 305 NIESVKSLDKHYLKKSLTIY-TETDVTP---TDLFHNDSPTEYLDIPADDNIIIENEDSL 472
++ K K +K ++ D P D H+D E + D N+ E S
Sbjct: 295 YLKRKKQQQKQEAEKQEEEKDSDDDEKPHECDDHHHHDHEDEPEEPENDSNVPEAEEKSD 354
Query: 473 EINETNSEDYCNIEYLSDEDYSD 541
E E ED +E ++ SD
Sbjct: 355 EEQEIMMEDVEGLEGGENDSESD 377
>AF304126-1|AAG50239.1| 384|Caenorhabditis elegans RING and zinc
finger protein protein.
Length = 384
Score = 36.7 bits (81), Expect = 0.012
Identities = 37/143 (25%), Positives = 59/143 (41%), Gaps = 7/143 (4%)
Frame = +2
Query: 134 ETYYED-IVEVNPECSPDLPQCVCYLCAGLLKKYSRFKSKCLVAQSLFYKILKSGKKV-- 304
+T+ ED + NP P + +C Y C G K + SKC + Q I+ + K++
Sbjct: 235 DTFPEDCFICGNPFVDPIVTKCKHYFCTGCALKSFQKSSKCPICQQNTENIMNTAKELLT 294
Query: 305 NIESVKSLDKHYLKKSLTIY-TETDVTP---TDLFHNDSPTEYLDIPADDNIIIENEDSL 472
++ K K +K ++ D P D H+D E + D N+ E S
Sbjct: 295 YLKRKKQQQKQEAEKQEEEKDSDDDEKPHECDDHHHHDHEDEPEEPENDSNVPEAEEKSD 354
Query: 473 EINETNSEDYCNIEYLSDEDYSD 541
E E ED +E ++ SD
Sbjct: 355 EEQEIMMEDVEGLEGGENDSESD 377
>Z54238-2|CAA90994.1| 200|Caenorhabditis elegans Hypothetical
protein T28C6.3 protein.
Length = 200
Score = 31.9 bits (69), Expect = 0.35
Identities = 23/98 (23%), Positives = 51/98 (52%), Gaps = 1/98 (1%)
Frame = +2
Query: 278 KILKSGKKVNIESVKSLDKHYLKKSLTIYTETDVTPTDLFHNDSPTEYLDIPADDNIIIE 457
+ILK + V ++ ++ +L + ++ +T + FH + T + D +++++ E
Sbjct: 42 EILKK-QDVQLQEALDMELKFLDTNEKLFVKT-LHDAQKFHQEPTTSFAD-ELEESVLCE 98
Query: 458 NE-DSLEINETNSEDYCNIEYLSDEDYSDLQSQLDSKE 568
+E +S ++E+ SED EY+ + D D + D +E
Sbjct: 99 SESESDALDESESEDSVVNEYVKESD--DEEDDEDKEE 134
>U14635-5|AAN63442.1| 464|Caenorhabditis elegans Hypothetical
protein C27H5.2d protein.
Length = 464
Score = 31.9 bits (69), Expect = 0.35
Identities = 19/93 (20%), Positives = 45/93 (48%)
Frame = +2
Query: 278 KILKSGKKVNIESVKSLDKHYLKKSLTIYTETDVTPTDLFHNDSPTEYLDIPADDNIIIE 457
++ K+ + + ++S ++ D H K+ +I+TE L + + E DD +
Sbjct: 343 ELRKTNENMKLQSEETKDNH--KQMQSIHTEVFEENAKLRNRNEDLERRFAHVDDELACV 400
Query: 458 NEDSLEINETNSEDYCNIEYLSDEDYSDLQSQL 556
NE+ + + +D+ ++Y ++ + L+ QL
Sbjct: 401 NENWAKELKEKQQDWDKVKYAAESEVLSLREQL 433
>U14635-4|AAL02446.1| 459|Caenorhabditis elegans Hypothetical
protein C27H5.2b protein.
Length = 459
Score = 31.9 bits (69), Expect = 0.35
Identities = 19/93 (20%), Positives = 45/93 (48%)
Frame = +2
Query: 278 KILKSGKKVNIESVKSLDKHYLKKSLTIYTETDVTPTDLFHNDSPTEYLDIPADDNIIIE 457
++ K+ + + ++S ++ D H K+ +I+TE L + + E DD +
Sbjct: 343 ELRKTNENMKLQSEETKDNH--KQMQSIHTEVFEENAKLRNRNEDLERRFAHVDDELACV 400
Query: 458 NEDSLEINETNSEDYCNIEYLSDEDYSDLQSQL 556
NE+ + + +D+ ++Y ++ + L+ QL
Sbjct: 401 NENWAKELKEKQQDWDKVKYAAESEVLSLREQL 433
>U14635-3|AAN63441.1| 491|Caenorhabditis elegans Hypothetical
protein C27H5.2c protein.
Length = 491
Score = 31.9 bits (69), Expect = 0.35
Identities = 19/93 (20%), Positives = 45/93 (48%)
Frame = +2
Query: 278 KILKSGKKVNIESVKSLDKHYLKKSLTIYTETDVTPTDLFHNDSPTEYLDIPADDNIIIE 457
++ K+ + + ++S ++ D H K+ +I+TE L + + E DD +
Sbjct: 343 ELRKTNENMKLQSEETKDNH--KQMQSIHTEVFEENAKLRNRNEDLERRFAHVDDELACV 400
Query: 458 NEDSLEINETNSEDYCNIEYLSDEDYSDLQSQL 556
NE+ + + +D+ ++Y ++ + L+ QL
Sbjct: 401 NENWAKELKEKQQDWDKVKYAAESEVLSLREQL 433
>U14635-2|AAC46656.2| 522|Caenorhabditis elegans Hypothetical
protein C27H5.2a protein.
Length = 522
Score = 31.9 bits (69), Expect = 0.35
Identities = 19/93 (20%), Positives = 45/93 (48%)
Frame = +2
Query: 278 KILKSGKKVNIESVKSLDKHYLKKSLTIYTETDVTPTDLFHNDSPTEYLDIPADDNIIIE 457
++ K+ + + ++S ++ D H K+ +I+TE L + + E DD +
Sbjct: 343 ELRKTNENMKLQSEETKDNH--KQMQSIHTEVFEENAKLRNRNEDLERRFAHVDDELACV 400
Query: 458 NEDSLEINETNSEDYCNIEYLSDEDYSDLQSQL 556
NE+ + + +D+ ++Y ++ + L+ QL
Sbjct: 401 NENWAKELKEKQQDWDKVKYAAESEVLSLREQL 433
>Z67882-2|CAA91799.1| 1318|Caenorhabditis elegans Hypothetical protein
F22E10.1 protein.
Length = 1318
Score = 28.7 bits (61), Expect = 3.3
Identities = 10/40 (25%), Positives = 22/40 (55%)
Frame = +2
Query: 242 KSKCLVAQSLFYKILKSGKKVNIESVKSLDKHYLKKSLTI 361
KS C+ FY + +++ +++KSL H+L+ + +
Sbjct: 1118 KSTCIAMLERFYDVSGGALRIDGQNIKSLSLHHLRTQMAL 1157
>U64859-7|AAC69095.1| 344|Caenorhabditis elegans Serpentine
receptor, class h protein11 protein.
Length = 344
Score = 28.3 bits (60), Expect = 4.4
Identities = 20/48 (41%), Positives = 28/48 (58%), Gaps = 9/48 (18%)
Frame = -1
Query: 123 NFKLYILTLN-----SRQIRQT----VSLPIIIKITMFCYVNFVILSL 7
+F LYI+TLN S QI T + + III I CYV+F++L +
Sbjct: 25 SFPLYIVTLNALFRESSQIFSTYKYFIIVHIIINIISECYVSFMMLPM 72
>U41007-19|AAA82274.1| 432|Caenorhabditis elegans Hypothetical
protein C33H5.17 protein.
Length = 432
Score = 28.3 bits (60), Expect = 4.4
Identities = 15/40 (37%), Positives = 23/40 (57%), Gaps = 4/40 (10%)
Frame = +2
Query: 431 PADDNIIIENEDSLEINETNSEDY----CNIEYLSDEDYS 538
P DD I ++EDS EI++T+++ C + Y SD S
Sbjct: 55 PDDDEIDEQDEDSAEIDDTSTDSLLGSRCMVPYDSDRSLS 94
>L15314-2|AAF99983.1| 322|Caenorhabditis elegans Hypothetical
protein K06H7.7 protein.
Length = 322
Score = 28.3 bits (60), Expect = 4.4
Identities = 17/52 (32%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
Frame = +2
Query: 227 KYSRFKSKCLVAQSLFYKILKSGKKVNIESVKSLD-KHYLKKSLTIYTETDV 379
K S KSK + SLF K ++ +N++ + + D HY KK++ T V
Sbjct: 113 KSSGVKSKYVEVMSLFQKSIQKFSIMNLDYMYTFDWNHYSKKNIQYVVFTKV 164
>AC199239-1|ABO33277.1| 147|Caenorhabditis elegans Hypothetical
protein 6R55.2 protein.
Length = 147
Score = 28.3 bits (60), Expect = 4.4
Identities = 11/32 (34%), Positives = 18/32 (56%)
Frame = +2
Query: 326 LDKHYLKKSLTIYTETDVTPTDLFHNDSPTEY 421
+ H+LK+ T+Y TD T T+ + SP +
Sbjct: 55 ITSHFLKRDATLYLSTDYTVTNWKGDGSPLSF 86
>U49830-13|AAK31474.1| 826|Caenorhabditis elegans Hypothetical
protein C33F10.2 protein.
Length = 826
Score = 27.5 bits (58), Expect = 7.6
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = +2
Query: 470 LEINETNSEDYCNIEYLSDEDYSDLQSQLD 559
L+INET DY N++ L+ SD Q ++D
Sbjct: 461 LDINETKWRDYLNLDVLASHS-SDRQLEVD 489
>AL110500-7|CAB54490.1| 489|Caenorhabditis elegans Hypothetical
protein Y87G2A.7 protein.
Length = 489
Score = 27.5 bits (58), Expect = 7.6
Identities = 15/59 (25%), Positives = 27/59 (45%)
Frame = +2
Query: 383 PTDLFHNDSPTEYLDIPADDNIIIENEDSLEINETNSEDYCNIEYLSDEDYSDLQSQLD 559
P+ F + PT +P DD E + + + + DY + E + E + +L +LD
Sbjct: 30 PSTSFWGNGPTS---VPVDDECDREEPATHQESSESDSDYSDGEEATPEQWKELDKELD 85
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,183,460
Number of Sequences: 27780
Number of extensions: 245533
Number of successful extensions: 789
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 728
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 787
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1258229602
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -