Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmov10i01
(734 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_31364| Best HMM Match : 2-Hacid_dh_C (HMM E-Value=1.5e-39) 103 1e-22
SB_36985| Best HMM Match : No HMM Matches (HMM E-Value=.) 79 3e-15
SB_7265| Best HMM Match : 2-Hacid_dh (HMM E-Value=0.00052) 59 3e-15
SB_12714| Best HMM Match : 2-Hacid_dh (HMM E-Value=2.6e-12) 74 1e-13
SB_36986| Best HMM Match : No HMM Matches (HMM E-Value=.) 71 7e-13
SB_51717| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.42
SB_39550| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.42
SB_32489| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.42
SB_4896| Best HMM Match : TFIID_20kDa (HMM E-Value=2.3e-05) 32 0.42
SB_4699| Best HMM Match : Lig_chan (HMM E-Value=1.1) 32 0.55
SB_51462| Best HMM Match : Ion_trans_2 (HMM E-Value=2.3e-15) 31 0.97
SB_33399| Best HMM Match : Ank (HMM E-Value=0) 31 0.97
SB_34586| Best HMM Match : Drf_FH1 (HMM E-Value=0.088) 30 2.2
SB_8083| Best HMM Match : Lectin_C (HMM E-Value=3.8e-22) 30 2.2
SB_35900| Best HMM Match : EGF_CA (HMM E-Value=2.5e-38) 29 3.0
SB_16235| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.0
SB_16587| Best HMM Match : Cytadhesin_P30 (HMM E-Value=0.69) 29 3.0
SB_33821| Best HMM Match : zf-MIZ (HMM E-Value=1.3e-29) 29 5.2
SB_27574| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.2
SB_21812| Best HMM Match : GRASP55_65 (HMM E-Value=2.3) 29 5.2
SB_27955| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.8
SB_25387| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.8
SB_19442| Best HMM Match : Beach (HMM E-Value=0) 28 6.8
SB_2661| Best HMM Match : EGF_CA (HMM E-Value=0.0062) 28 6.8
SB_43283| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.8
SB_32754| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.8
SB_21917| Best HMM Match : CXC (HMM E-Value=0.22) 28 6.8
SB_5193| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.8
SB_50132| Best HMM Match : Hydrophobin (HMM E-Value=6.1) 28 9.0
SB_45345| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.0
SB_23444| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.0
SB_19884| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.0
SB_19775| Best HMM Match : Arm (HMM E-Value=0.27) 28 9.0
SB_12028| Best HMM Match : DAG1 (HMM E-Value=0.22) 28 9.0
SB_45977| Best HMM Match : MBT (HMM E-Value=0) 28 9.0
SB_38912| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.0
SB_4520| Best HMM Match : Tsg (HMM E-Value=7.8) 28 9.0
SB_1163| Best HMM Match : DMA (HMM E-Value=1.4e-11) 28 9.0
>SB_31364| Best HMM Match : 2-Hacid_dh_C (HMM E-Value=1.5e-39)
Length = 401
Score = 103 bits (247), Expect = 1e-22
Identities = 46/81 (56%), Positives = 59/81 (72%)
Frame = +2
Query: 482 YTGSELAGKTLAILGLGRVGREVATRMYAFGMNIIGFDPFVSADQCAQFHCTKMELEDIW 661
+ G+EL GKTLAI+GLGR+GREVA RM ++G+ IG+DP VS A+ + ME E IW
Sbjct: 1 FMGNELFGKTLAIIGLGRIGREVALRMQSYGVKTIGYDPLVSPQDAAESNIEWMETEKIW 60
Query: 662 PLADYITLHTPLIXSTRNFIN 724
PLADYIT+H PLI T+ +N
Sbjct: 61 PLADYITVHVPLIPPTKGMLN 81
>SB_36985| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 323
Score = 79.4 bits (187), Expect = 3e-15
Identities = 50/167 (29%), Positives = 92/167 (55%), Gaps = 6/167 (3%)
Frame = +2
Query: 245 VTKEVLDAGVKLKVVGRAGAGVDNIDVDSAGKKGVGVINAPGANALSACELTCTLMLVLA 424
+T+E++ + LKV+ GAG+DNID+++A ++G+ V N PG + A + L++ A
Sbjct: 62 ITEELMASLPNLKVISNIGAGIDNIDLEAAKRRGILVGNTPGISDCLA-DFAWALLMAAA 120
Query: 425 RHVVPASTAL-KAGRWDRAL--YTGSELAGKTLAILGLGRVGREVATRMYAFGMNIIGFD 595
R+V+ A + K G ++ + G+ ++G TL I+GLG +G VA R F M I+ ++
Sbjct: 121 RNVIQADAMMRKPGFKIPSIINWHGTRVSGATLGIIGLGNIGLAVAKRAKGFDMRILYYN 180
Query: 596 ---PFVSADQCAQFHCTKMELEDIWPLADYITLHTPLIXSTRNFINA 727
+ + +C+ L+D+ +DY+ L L T++ I +
Sbjct: 181 RTRKMKAESELGVHYCS--GLKDLLKESDYVMLSCALTPETKHIIKS 225
>SB_7265| Best HMM Match : 2-Hacid_dh (HMM E-Value=0.00052)
Length = 126
Score = 59.3 bits (137), Expect(2) = 3e-15
Identities = 27/49 (55%), Positives = 38/49 (77%)
Frame = +2
Query: 212 HDALVVRSATQVTKEVLDAGVKLKVVGRAGAGVDNIDVDSAGKKGVGVI 358
+D L+VRSAT+V+++V+ AG LK++GRAG GVDNID +A GV V+
Sbjct: 77 YDGLIVRSATKVSEDVIKAGKNLKIIGRAGTGVDNIDTVAASLHGVLVM 125
Score = 40.3 bits (90), Expect(2) = 3e-15
Identities = 18/43 (41%), Positives = 26/43 (60%)
Frame = +2
Query: 80 VDIKSVLIVDGVGAKCAELLNAYGIATTTKAKISKEELLMEIP 208
+++K VLI D V + C +L G+ K+SKEEL+ EIP
Sbjct: 4 LELKRVLISDSVDSCCKTILERNGVTVDVNTKLSKEELVSEIP 46
>SB_12714| Best HMM Match : 2-Hacid_dh (HMM E-Value=2.6e-12)
Length = 189
Score = 74.1 bits (174), Expect = 1e-13
Identities = 43/117 (36%), Positives = 62/117 (52%), Gaps = 3/117 (2%)
Frame = +2
Query: 245 VTKEVLDAGVKLKVVGRAGAGVDNIDVDSAGKKGVGVINAPGANALSACELTCTLMLVLA 424
V+ +LD LKV+ GAG D ID+ +A K+G+ V N PG ++ L+L A
Sbjct: 58 VSNSLLDDLPSLKVISSIGAGFDRIDIPAATKRGIRVGNTPGVVQDCTADMAIGLLLASA 117
Query: 425 RHVVPA-STALKAGRWDRALYT--GSELAGKTLAILGLGRVGREVATRMYAFGMNII 586
RH+V + K G +++ G+ + G TL I+GLG VG VA R F M I+
Sbjct: 118 RHIVTGDANTRKPGFTKESIFNCFGTRVTGSTLGIVGLGAVGSAVAMRAKGFKMRIL 174
>SB_36986| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 628
Score = 71.3 bits (167), Expect = 7e-13
Identities = 49/167 (29%), Positives = 84/167 (50%), Gaps = 6/167 (3%)
Frame = +2
Query: 245 VTKEVLDAGVKLKVVGRAGAGVDNIDVDSAGKKGVGVINAPGANALSACELTCTLMLVLA 424
V ++D +L+V+ AG GVD+ID+ +A +G+ V N PG + L+L A
Sbjct: 59 VDSALMDCYPELRVISSAGVGVDHIDLAAATIRGIRVGNTPGVVQECTADHAIGLLLASA 118
Query: 425 RHVVPASTALK-AGRWDRALYT--GSELAGKTLAILGLGRVGREVATRMYAFGMNIIGFD 595
R + + ++ G +++ G+++ G TL I+GLG VG VA R F M I+ +
Sbjct: 119 RKICSGDSVIRQPGFSKESIFNSFGTKVTGSTLGIVGLGGVGSAVANRAKGFKMRILYHN 178
Query: 596 PFVSAD---QCAQFHCTKMELEDIWPLADYITLHTPLIXSTRNFINA 727
D + +C+K L+++ +D++ L L TR+ I A
Sbjct: 179 RTRKEDKELETGAEYCSK--LDELLKESDFVVLCCALTDETRHLITA 223
>SB_51717| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 799
Score = 32.3 bits (70), Expect = 0.42
Identities = 24/88 (27%), Positives = 39/88 (44%), Gaps = 4/88 (4%)
Frame = -3
Query: 543 RPTLPRPR----MARVLPASSLPVYRARSHLPAFSAVEAGTTWRARTNINVQVSSHALSA 376
R ++PR R R+ P RA L A +A AGT +R++ +V ++S + +
Sbjct: 546 RISVPRRRAGSAQGRITTKKKTPPRRANL-LEALTAAAAGTPAASRSSSSVSLASPGMRS 604
Query: 375 LAPGALITPTPFLPAESTSMLSTPAPAR 292
+TP F P S S + P +
Sbjct: 605 SLGSLQLTPPSFTPRSSISRRRSDTPTK 632
>SB_39550| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 158
Score = 32.3 bits (70), Expect = 0.42
Identities = 13/33 (39%), Positives = 20/33 (60%)
Frame = -3
Query: 354 TPTPFLPAESTSMLSTPAPARPTTFSFTPASNT 256
TP+P P ++T +TP P PT + TP ++T
Sbjct: 58 TPSPTAPTQTTPTPATPTPTTPTPKTPTPTTST 90
Score = 31.9 bits (69), Expect = 0.55
Identities = 14/33 (42%), Positives = 20/33 (60%)
Frame = -3
Query: 354 TPTPFLPAESTSMLSTPAPARPTTFSFTPASNT 256
TPT P ++T +TP+P PT + TPA+ T
Sbjct: 43 TPTSTAPTQTTPTPTTPSPTAPTQTTPTPATPT 75
Score = 31.9 bits (69), Expect = 0.55
Identities = 14/33 (42%), Positives = 19/33 (57%)
Frame = -3
Query: 354 TPTPFLPAESTSMLSTPAPARPTTFSFTPASNT 256
TPTP P+ + +TP PA PT + TP + T
Sbjct: 53 TPTPTTPSPTAPTQTTPTPATPTPTTPTPKTPT 85
Score = 31.9 bits (69), Expect = 0.55
Identities = 16/34 (47%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
Frame = -3
Query: 354 TPTPFLPAESTSMLSTPAPA-RPTTFSFTPASNT 256
TPTP P +TS L+ P PA PT TP ++T
Sbjct: 78 TPTPKTPTPTTSTLTKPTPATTPTPTKPTPTAHT 111
Score = 28.7 bits (61), Expect = 5.2
Identities = 24/93 (25%), Positives = 34/93 (36%)
Frame = -3
Query: 540 PTLPRPRMARVLPASSLPVYRARSHLPAFSAVEAGTTWRARTNINVQVSSHALSALAPGA 361
PTL P + + P ++ P + + TT + + S AP
Sbjct: 8 PTLTTPTLTKATPQTT-PTPTKPTPTTHTPTKPSPTTPTSTAPTQTTPTPTTPSPTAP-T 65
Query: 360 LITPTPFLPAESTSMLSTPAPARPTTFSFTPAS 262
TPTP P +T TP P T TPA+
Sbjct: 66 QTTPTPATPTPTTPTPKTPTPTTSTLTKPTPAT 98
>SB_32489| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1240
Score = 32.3 bits (70), Expect = 0.42
Identities = 23/67 (34%), Positives = 34/67 (50%), Gaps = 3/67 (4%)
Frame = -3
Query: 447 VEAGTTWRARTNINVQVSSHALSAL-APGALITPTPFLPAES--TSMLSTPAPARPTTFS 277
V A T+ + VQ +++ +S + AP A + PT PA++ T STPA + T
Sbjct: 689 VFANTSQSNKAADKVQSATNVVSVMSAPPAYVPPTSAPPAQTQVTDTYSTPAQTQVTDTY 748
Query: 276 FTPASNT 256
TPA T
Sbjct: 749 STPAQTT 755
>SB_4896| Best HMM Match : TFIID_20kDa (HMM E-Value=2.3e-05)
Length = 819
Score = 32.3 bits (70), Expect = 0.42
Identities = 15/38 (39%), Positives = 24/38 (63%)
Frame = -3
Query: 396 SSHALSALAPGALITPTPFLPAESTSMLSTPAPARPTT 283
SS +++ +L TP+ P+ ST LSTP P++P+T
Sbjct: 196 SSSSITTTKLSSLSTPSLSTPSLSTPSLSTPLPSKPST 233
>SB_4699| Best HMM Match : Lig_chan (HMM E-Value=1.1)
Length = 186
Score = 31.9 bits (69), Expect = 0.55
Identities = 12/31 (38%), Positives = 17/31 (54%)
Frame = +1
Query: 124 VCRTPQRLRNRHHHQGQDLQGRTSYGDTQPR 216
+CR+ + RHHH L G +SYG P+
Sbjct: 113 LCRSKRPYGLRHHHHASGLMGASSYGMAMPK 143
>SB_51462| Best HMM Match : Ion_trans_2 (HMM E-Value=2.3e-15)
Length = 930
Score = 31.1 bits (67), Expect = 0.97
Identities = 20/65 (30%), Positives = 28/65 (43%)
Frame = -2
Query: 682 GDVVR*RPNVLQLHLGAMELGALISRHERVESDDVHAEGVHPSGHLAADPAKAKDGEGLA 503
G VVR P VL +H G LG + R + GV+ + DP D +A
Sbjct: 277 GTVVRGNPRVLLVHRG--RLGTVAGRSPALSEKASDCVGVNTKSNKNVDPCSWSDVSRMA 334
Query: 502 SELAA 488
++L A
Sbjct: 335 ADLCA 339
>SB_33399| Best HMM Match : Ank (HMM E-Value=0)
Length = 1416
Score = 31.1 bits (67), Expect = 0.97
Identities = 31/112 (27%), Positives = 48/112 (42%)
Frame = -3
Query: 588 PMMFMPKAYILVATSRPTLPRPRMARVLPASSLPVYRARSHLPAFSAVEAGTTWRARTNI 409
P + MP + ++ +S PT ++ V S ++ SH F+ + +
Sbjct: 1142 PNVAMPASTVVNTSSLPTAFSNLLSHVSQTLSPSIWNNISHPSTFNPD------MPKPST 1195
Query: 408 NVQVSSHALSALAPGALITPTPFLPAESTSMLSTPAPARPTTFSFTPASNTS 253
N S L PGAL TP P +TS T A PTT TP++++S
Sbjct: 1196 NNDPVSQPLFITTPGALFTPLPH-ETSATSPPYTSASPVPTT---TPSASSS 1243
>SB_34586| Best HMM Match : Drf_FH1 (HMM E-Value=0.088)
Length = 665
Score = 29.9 bits (64), Expect = 2.2
Identities = 20/79 (25%), Positives = 34/79 (43%)
Frame = -3
Query: 453 SAVEAGTTWRARTNINVQVSSHALSALAPGALITPTPFLPAESTSMLSTPAPARPTTFSF 274
+ V A +T T + + ++ A + +AP P L ++T T A A T +
Sbjct: 223 TTVAAESTDAPDTTVAAETTASAETTVAPETTAAPDTTLVPDTTVAAETTAAAETTETTA 282
Query: 273 TPASNTSLVT*VAERTTRA 217
PA+ + T + TT A
Sbjct: 283 VPATTDAPATNLPPETTAA 301
Score = 29.1 bits (62), Expect = 3.9
Identities = 36/142 (25%), Positives = 56/142 (39%), Gaps = 9/142 (6%)
Frame = -3
Query: 612 SADTKGSNPMMFMPKAYILVATSRPTLPRPRMARVLPASSLPVYRARSHLPAFSAVEAGT 433
+A+T S P+ A +P +A A++ A + + V A T
Sbjct: 136 AAETTASAETTVAPQT--TAAPDTALVPDTTVAAETTAAAETTVAAETIAAPDTTVAAET 193
Query: 432 TWRARTNINVQVSSHALSALAPGALITPTPFLPAESTSMLSTPAPARPTTFS-------F 274
T A T + + + + +AP + P + AEST T A T +
Sbjct: 194 TASAETTVAPETTLAPETTMAPETTMAPETTVAAESTDAPDTTVAAETTASAETTVAPET 253
Query: 273 TPASNTSLV--T*VAERTTRAS 214
T A +T+LV T VA TT A+
Sbjct: 254 TAAPDTTLVPDTTVAAETTAAA 275
>SB_8083| Best HMM Match : Lectin_C (HMM E-Value=3.8e-22)
Length = 3445
Score = 29.9 bits (64), Expect = 2.2
Identities = 20/79 (25%), Positives = 34/79 (43%)
Frame = -3
Query: 453 SAVEAGTTWRARTNINVQVSSHALSALAPGALITPTPFLPAESTSMLSTPAPARPTTFSF 274
+ V A +T T + + ++ A + +AP P L ++T T A A T +
Sbjct: 2036 TTVAAESTDAPDTTVAAETTASAETTVAPETTAAPDTTLVPDTTVAAETTAAAETTETTA 2095
Query: 273 TPASNTSLVT*VAERTTRA 217
PA+ + T + TT A
Sbjct: 2096 VPATTDAPATNLPPETTAA 2114
>SB_35900| Best HMM Match : EGF_CA (HMM E-Value=2.5e-38)
Length = 839
Score = 29.5 bits (63), Expect = 3.0
Identities = 22/102 (21%), Positives = 41/102 (40%), Gaps = 1/102 (0%)
Frame = -3
Query: 555 VATSRPTLPRPRMARVLPASSLPVYRARSHLPAFSAVEAGTTWRARTNINVQVSSHALSA 376
VA P +A + + + L + V TT + + ++ ++ ++
Sbjct: 476 VAPETTVAPETTVASETTVAPKTTAASEATLAPETTVAPETTAAPESTLALETTAAPVTT 535
Query: 375 LAPGALITP-TPFLPAESTSMLSTPAPARPTTFSFTPASNTS 253
+AP P TP +P + ++ ST AP TPA T+
Sbjct: 536 VAPETTAAPDTPIVPETTVALESTVAPEITVVPETTPALETT 577
Score = 28.7 bits (61), Expect = 5.2
Identities = 25/104 (24%), Positives = 41/104 (39%), Gaps = 1/104 (0%)
Frame = -3
Query: 555 VATSRPTLPRPRMARVLPASSLPVYRARSHLPAFSAVEAGTTWRARTNINVQVSSHALSA 376
VA P +A + A+ S + + V TT + T + + ++ + +
Sbjct: 446 VAPETTAAPESTLAPEITAAPDTTMVPESTVAPETTVAPETTVASETTVAPKTTAASEAT 505
Query: 375 LAPGALITPTPFLPAESTSML-STPAPARPTTFSFTPASNTSLV 247
LAP + P EST L +T AP T A +T +V
Sbjct: 506 LAPETTVAPETTAAPESTLALETTAAPVTTVAPETTAAPDTPIV 549
>SB_16235| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 4072
Score = 29.5 bits (63), Expect = 3.0
Identities = 29/114 (25%), Positives = 48/114 (42%)
Frame = -3
Query: 555 VATSRPTLPRPRMARVLPASSLPVYRARSHLPAFSAVEAGTTWRARTNINVQVSSHALSA 376
VA LP + SS ++L + S V T+ + + + S
Sbjct: 1100 VAPGTTVLPESTVTPGTTVSSESTATPLTNLASESTVTLETSISSEGTFAPRTTLAHKST 1159
Query: 375 LAPGALITPTPFLPAESTSMLSTPAPARPTTFSFTPASNTSLVT*VAERTTRAS 214
+APG ++P + EST ++T + A P T + + S L+T A +T AS
Sbjct: 1160 VAPGTTVSPESTVQPEST--IATVSSAAPET-TESSESTAELLTAAASESTVAS 1210
>SB_16587| Best HMM Match : Cytadhesin_P30 (HMM E-Value=0.69)
Length = 404
Score = 29.5 bits (63), Expect = 3.0
Identities = 35/118 (29%), Positives = 49/118 (41%), Gaps = 13/118 (11%)
Frame = -3
Query: 537 TLPRPRMARVLPASSLPVYRARSHLPAFSAVEAGTTWRARTNINVQVSSHALSAL----- 373
T+ R R A L A ++ + S A + R+ ++ + S A SA
Sbjct: 147 TMLRKRTLAATMAHRLSTSEAHYNIQSKSKTSAARSSVIRSLMSAEASLTAASAAPVTPT 206
Query: 372 -APGALITPT-----PFLPAESTSMLSTP--APARPTTFSFTPASNTSLVT*VAERTT 223
AP A +TPT P P + + TP APA P T + PA+ VT A R T
Sbjct: 207 AAPAAPVTPTAAPAAPVTPTAAPAARVTPTAAPAAPVTPTAAPAAR---VTPTAARVT 261
>SB_33821| Best HMM Match : zf-MIZ (HMM E-Value=1.3e-29)
Length = 1202
Score = 28.7 bits (61), Expect = 5.2
Identities = 13/30 (43%), Positives = 18/30 (60%)
Frame = -1
Query: 287 PPSASRLRPTPLWSLELLNAQPERRGWVSP 198
PP + +LRP+P SL ++NA G SP
Sbjct: 1006 PPVSKKLRPSPPDSLPIMNAGTPSSGHFSP 1035
>SB_27574| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1258
Score = 28.7 bits (61), Expect = 5.2
Identities = 19/66 (28%), Positives = 31/66 (46%)
Frame = +2
Query: 95 VLIVDGVGAKCAELLNAYGIATTTKAKISKEELLMEIPNHDALVVRSATQVTKEVLDAGV 274
V+IVD G KC LL+ ++ K ++ E+ D ++ T+EV A +
Sbjct: 303 VVIVDVEGIKCRALLDTGAGVPALLDRLKKRQVTREVRKIDMML----GSTTREVELANI 358
Query: 275 KLKVVG 292
+K VG
Sbjct: 359 TIKAVG 364
>SB_21812| Best HMM Match : GRASP55_65 (HMM E-Value=2.3)
Length = 660
Score = 28.7 bits (61), Expect = 5.2
Identities = 15/33 (45%), Positives = 17/33 (51%)
Frame = -3
Query: 351 PTPFLPAESTSMLSTPAPARPTTFSFTPASNTS 253
P P ST +STP R T SFTP S+ S
Sbjct: 453 PPTLSPLASTQPVSTPRQQRRTPPSFTPRSSIS 485
>SB_27955| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 613
Score = 28.3 bits (60), Expect = 6.8
Identities = 11/29 (37%), Positives = 15/29 (51%)
Frame = -3
Query: 345 PFLPAESTSMLSTPAPARPTTFSFTPASN 259
P P+ ++ TP PT F FTP +N
Sbjct: 444 PVTPSSGSTTRQTPNSIEPTRFHFTPITN 472
>SB_25387| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 533
Score = 28.3 bits (60), Expect = 6.8
Identities = 10/18 (55%), Positives = 14/18 (77%)
Frame = +1
Query: 133 TPQRLRNRHHHQGQDLQG 186
TPQ+L HH++G D+QG
Sbjct: 254 TPQKLPFHHHNKGYDIQG 271
>SB_19442| Best HMM Match : Beach (HMM E-Value=0)
Length = 796
Score = 28.3 bits (60), Expect = 6.8
Identities = 15/52 (28%), Positives = 28/52 (53%), Gaps = 2/52 (3%)
Frame = -3
Query: 417 TNINVQVSSHALSALAPGALITPTPFLPAESTSMLSTPAPARPTTFS--FTP 268
T ++V + + + + G L+TP P+LPA ++ T P+T+ +TP
Sbjct: 492 TCVDVNAALGLVVSGSQGKLLTPFPYLPAAEYTLPLTSRLIHPSTYKPLYTP 543
>SB_2661| Best HMM Match : EGF_CA (HMM E-Value=0.0062)
Length = 87
Score = 28.3 bits (60), Expect = 6.8
Identities = 15/54 (27%), Positives = 24/54 (44%)
Frame = +2
Query: 242 QVTKEVLDAGVKLKVVGRAGAGVDNIDVDSAGKKGVGVINAPGANALSACELTC 403
++T++ +D K K+ A A VD G +N PG+ AC +C
Sbjct: 5 EITRKFVDYAEKAKLRASAQAHVDECQEVDKCSGGEYCVNEPGSFRCEACHESC 58
>SB_43283| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 278
Score = 28.3 bits (60), Expect = 6.8
Identities = 16/45 (35%), Positives = 22/45 (48%), Gaps = 1/45 (2%)
Frame = -3
Query: 354 TPTPFLPAESTSMLSTPAPARPTTFSF-TPASNTSLVT*VAERTT 223
TPT P ++T + +TP A PT TP TS T + T+
Sbjct: 219 TPTASPPVKTTPLAATPVYATPTAPELTTPLDTTSTATTPVDTTS 263
>SB_32754| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 5659
Score = 28.3 bits (60), Expect = 6.8
Identities = 24/89 (26%), Positives = 39/89 (43%)
Frame = -3
Query: 453 SAVEAGTTWRARTNINVQVSSHALSALAPGALITPTPFLPAESTSMLSTPAPARPTTFSF 274
S V GTT T I + + +AP + P L E+T ++ + P T +
Sbjct: 2101 STVAPGTTIAPETTIAPGTTMAPETTVAPETTMVPVTTLEPETT--MAPESTVAPVT-TM 2157
Query: 273 TPASNTSLVT*VAERTTRASWLGISIRSS 187
P S + VT +A +T A + I+ S+
Sbjct: 2158 APDSTVASVTTMAPESTLAPEITIASEST 2186
Score = 28.3 bits (60), Expect = 6.8
Identities = 29/116 (25%), Positives = 45/116 (38%), Gaps = 1/116 (0%)
Frame = -3
Query: 561 ILVATSRPTLPRPRMARVLPASSLPVYRARSHLPAFSAVEAGTTWRARTNINVQVSSHAL 382
I VA MA A S + + + S V +GTT +T +
Sbjct: 3821 ITVAPETTAAADTTMAPETTAISETTFAPETTVAPESTVPSGTTAALKTTLGPLTDKRKE 3880
Query: 381 SALAPGA-LITPTPFLPAESTSMLSTPAPARPTTFSFTPASNTSLVT*VAERTTRA 217
+ L+PG ++ PT + A + + +T A S PA+ + T V TT A
Sbjct: 3881 TTLSPGGQIVLPTSAMKATAEAPETTMAQES----SLAPATTMAPETTVKPETTEA 3932
>SB_21917| Best HMM Match : CXC (HMM E-Value=0.22)
Length = 470
Score = 28.3 bits (60), Expect = 6.8
Identities = 12/30 (40%), Positives = 16/30 (53%)
Frame = +2
Query: 326 DSAGKKGVGVINAPGANALSACELTCTLML 415
D G+ GV V +APG C++ CT L
Sbjct: 235 DEMGRAGVTVEHAPGDADYKICQMACTYAL 264
>SB_5193| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 672
Score = 28.3 bits (60), Expect = 6.8
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = -3
Query: 399 VSSHALSALAPGALITPTPFLPAESTSML 313
+S H L LA G PTP +PA + S+L
Sbjct: 163 LSPHELRLLAKGLKFIPTPPIPASNKSLL 191
>SB_50132| Best HMM Match : Hydrophobin (HMM E-Value=6.1)
Length = 114
Score = 27.9 bits (59), Expect = 9.0
Identities = 19/42 (45%), Positives = 26/42 (61%), Gaps = 4/42 (9%)
Frame = -3
Query: 396 SSHALSALAPG---ALITPTPFLP-AESTSMLSTPAPARPTT 283
S +A +A+A G A +TP+ P A STS + + A ARPTT
Sbjct: 22 SINATTAIATGTFSATVTPSKTSPVAMSTSAVFSTAAARPTT 63
>SB_45345| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2346
Score = 27.9 bits (59), Expect = 9.0
Identities = 17/49 (34%), Positives = 24/49 (48%)
Frame = -3
Query: 606 DTKGSNPMMFMPKAYILVATSRPTLPRPRMARVLPASSLPVYRARSHLP 460
DT+ NP ++P + + S LP PR+ LP LP +R LP
Sbjct: 1318 DTRNDNPANYVPPWELPLPPSGLPLPLPRLP--LPPLRLPPPHSRLPLP 1364
>SB_23444| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 124
Score = 27.9 bits (59), Expect = 9.0
Identities = 19/68 (27%), Positives = 33/68 (48%)
Frame = -2
Query: 643 HLGAMELGALISRHERVESDDVHAEGVHPSGHLAADPAKAKDGEGLASELAASVQSPVPP 464
H G +E G +++ R+ A V S +A P++ + EGL ++ A +PVP
Sbjct: 54 HPGRVEAGRRLAKWNRINRAKKEALRVVQSP-VAPGPSEPQGREGLRADDAFGTHTPVPE 112
Query: 463 ASLQRSGS 440
++ S S
Sbjct: 113 SNSAWSAS 120
>SB_19884| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3486
Score = 27.9 bits (59), Expect = 9.0
Identities = 12/35 (34%), Positives = 21/35 (60%)
Frame = +2
Query: 125 CAELLNAYGIATTTKAKISKEELLMEIPNHDALVV 229
C L N Y A+T++ K SKE+++ ++ +VV
Sbjct: 3040 CQTLNNTYSPASTSRVKASKEQIISANSSYAEIVV 3074
>SB_19775| Best HMM Match : Arm (HMM E-Value=0.27)
Length = 607
Score = 27.9 bits (59), Expect = 9.0
Identities = 22/75 (29%), Positives = 39/75 (52%), Gaps = 2/75 (2%)
Frame = -3
Query: 513 RVLPASSLPVYRARSHLPAFSAVEAGTTWRARTNINVQVSSHALSALAPGALITPTPF-- 340
R+ PASS A+S +P + ++ ++ T +N + S+H+ + + A + TP
Sbjct: 125 RLKPASSRQEDSAKSIVPDNNKSTTVSSCKSTTAVNSRTSTHSAGSKSSSAAYSRTPASG 184
Query: 339 LPAESTSMLSTPAPA 295
LP +STS S+ A
Sbjct: 185 LP-KSTSTSSSKVTA 198
>SB_12028| Best HMM Match : DAG1 (HMM E-Value=0.22)
Length = 1249
Score = 27.9 bits (59), Expect = 9.0
Identities = 15/56 (26%), Positives = 28/56 (50%)
Frame = -3
Query: 417 TNINVQVSSHALSALAPGALITPTPFLPAESTSMLSTPAPARPTTFSFTPASNTSL 250
+ + ++ SS + S+LAP T T L S + +PA T + A+++S+
Sbjct: 755 STVILETSSSSASSLAPSPTATTTSTLQTTEPSSTPSTSPALTVTMTTVIATDSSI 810
>SB_45977| Best HMM Match : MBT (HMM E-Value=0)
Length = 1198
Score = 27.9 bits (59), Expect = 9.0
Identities = 13/37 (35%), Positives = 17/37 (45%)
Frame = -1
Query: 491 CQCTEPGPTCQPSAQWKLGPRGEPEPTSTCRSARTRS 381
C TEP P Q S+ K PE +++ S T S
Sbjct: 168 CSTTEPAPQDQVSSSCKTTETSRPETSTSATSEETNS 204
>SB_38912| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 168
Score = 27.9 bits (59), Expect = 9.0
Identities = 15/36 (41%), Positives = 19/36 (52%)
Frame = +1
Query: 139 QRLRNRHHHQGQDLQGRTSYGDTQPRRSGCAFSNSS 246
+R ++R DL +GD QPRRS F NSS
Sbjct: 87 RRTKSRSSSLKDDLSPFLVFGDWQPRRSERIFINSS 122
>SB_4520| Best HMM Match : Tsg (HMM E-Value=7.8)
Length = 594
Score = 27.9 bits (59), Expect = 9.0
Identities = 17/45 (37%), Positives = 25/45 (55%), Gaps = 3/45 (6%)
Frame = +1
Query: 388 VRADLHVDVGSGSPR--GPSFHCAEGWQVGPGSVH-WQRARWQDP 513
VR ++ G G+ GPS AEG ++GP +VH A W++P
Sbjct: 328 VRGPFNLSHGPGNRNRYGPSLVHAEGLRLGPKTVHRILHAVWKNP 372
>SB_1163| Best HMM Match : DMA (HMM E-Value=1.4e-11)
Length = 403
Score = 27.9 bits (59), Expect = 9.0
Identities = 16/34 (47%), Positives = 19/34 (55%)
Frame = -3
Query: 390 HALSALAPGALITPTPFLPAESTSMLSTPAPARP 289
HA A AP + P P PA STS + TP+P P
Sbjct: 304 HAPIARAP--IARPLPTSPACSTSRIYTPSPLPP 335
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,487,927
Number of Sequences: 59808
Number of extensions: 493715
Number of successful extensions: 1967
Number of sequences better than 10.0: 38
Number of HSP's better than 10.0 without gapping: 1635
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1947
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1974037988
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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