Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmov10i01
(734 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g17745.1 68414.m02196 D-3-phosphoglycerate dehydrogenase / 3-... 168 4e-42
At3g19480.1 68416.m02469 D-3-phosphoglycerate dehydrogenase, put... 159 2e-39
At4g34200.1 68417.m04854 D-3-phosphoglycerate dehydrogenase, put... 158 4e-39
At5g14780.1 68418.m01734 formate dehydrogenase (FDH) identical t... 87 9e-18
At1g79870.1 68414.m09330 oxidoreductase family protein contains ... 73 2e-13
At1g68010.1 68414.m07769 glycerate dehydrogenase / NADH-dependen... 73 3e-13
At1g72190.1 68414.m08347 oxidoreductase family protein similar t... 69 4e-12
At2g45630.2 68415.m05674 oxidoreductase family protein low simil... 68 7e-12
At1g12550.1 68414.m01455 oxidoreductase family protein similar t... 66 3e-11
At3g28790.1 68416.m03593 expressed protein 36 0.021
At2g45000.1 68415.m05603 expressed protein contains Pfam profile... 35 0.064
At1g01510.1 68414.m00067 C-terminal binding protein (ANGUSTIFOLI... 34 0.085
At5g28310.1 68418.m03437 oxidoreductase-related low similarity t... 33 0.20
At1g15290.1 68414.m01830 tetratricopeptide repeat (TPR)-containi... 31 1.0
At4g35240.1 68417.m05009 expressed protein contains Pfam domains... 30 1.8
At1g65960.1 68414.m07484 glutamate decarboxylase 2 (GAD 2) simil... 30 1.8
At1g23180.1 68414.m02896 armadillo/beta-catenin repeat family pr... 30 1.8
At1g79410.1 68414.m09254 transporter-related low similarity to o... 29 2.4
At1g49870.1 68414.m05591 expressed protein ; expression supporte... 29 3.2
At1g30950.1 68414.m03790 unusual floral organ (UFO) / F-box fami... 29 3.2
At1g01390.1 68414.m00054 UDP-glucoronosyl/UDP-glucosyl transfera... 29 3.2
At4g15300.1 68417.m02342 cytochrome P450 family protein similar ... 29 4.2
At2g29210.1 68415.m03550 splicing factor PWI domain-containing p... 29 4.2
At1g78490.1 68414.m09149 cytochrome P450 family protein similar ... 29 4.2
At4g13940.1 68417.m02157 adenosylhomocysteinase / S-adenosyl-L-h... 28 5.6
At4g11420.1 68417.m01840 eukaryotic translation initiation facto... 28 7.4
At3g23810.1 68416.m02993 adenosylhomocysteinase, putative / S-ad... 28 7.4
At3g19160.1 68416.m02433 adenylate isopentenyltransferase 8 / ad... 28 7.4
At1g72680.1 68414.m08405 cinnamyl-alcohol dehydrogenase, putativ... 28 7.4
At1g13530.1 68414.m01586 expressed protein ; expression support... 28 7.4
At1g06460.1 68414.m00684 31.2 kDa small heat shock family protei... 28 7.4
At5g52910.1 68418.m06566 timeless family protein contains Pfam d... 27 9.8
At5g11430.1 68418.m01335 transcription elongation factor-related... 27 9.8
At3g30290.1 68416.m03825 cytochrome P450 family protein similar ... 27 9.8
At1g62760.1 68414.m07083 invertase/pectin methylesterase inhibit... 27 9.8
>At1g17745.1 68414.m02196 D-3-phosphoglycerate dehydrogenase /
3-PGDH identical to SP|O04130
Length = 624
Score = 168 bits (408), Expect = 4e-42
Identities = 83/211 (39%), Positives = 127/211 (60%), Gaps = 1/211 (0%)
Frame = +2
Query: 95 VLIVDGVGAKCAELLNAYGIATTTKAKISKEELLMEIPNHDALVVRSATQVTKEVLDAGV 274
+L+ + +G LL +G + +S E+L ++ DAL+VRS T+VT+EV +A
Sbjct: 85 ILVTEKLGEAGVNLLREFGDVDCSY-DLSPEDLKKKVAESDALIVRSGTKVTREVFEAAK 143
Query: 275 -KLKVVGRAGAGVDNIDVDSAGKKGVGVINAPGANALSACELTCTLMLVLARHVVPASTA 451
+LKVVGRAG G+DN+D+ +A + G V+NAP AN ++A E L+ +AR+V A +
Sbjct: 144 GRLKVVGRAGVGIDNVDLQAATEHGCLVVNAPTANTVAAAEHGIALLASMARNVAQADAS 203
Query: 452 LKAGRWDRALYTGSELAGKTLAILGLGRVGREVATRMYAFGMNIIGFDPFVSADQCAQFH 631
+KAG+W+R+ Y G L GKTLA++G G+VG EVA R GM +I DP+ AD+
Sbjct: 204 IKAGKWERSKYVGVSLVGKTLAVMGFGKVGTEVARRAKGLGMTVISHDPYAPADRARALG 263
Query: 632 CTKMELEDIWPLADYITLHTPLIXSTRNFIN 724
+ + AD+++LH PL +T+ N
Sbjct: 264 VDLVSFDQAISTADFVSLHMPLTPATKKVFN 294
>At3g19480.1 68416.m02469 D-3-phosphoglycerate dehydrogenase,
putative / 3-PGDH, putative similar to SP:O04130 from
[Arabidopsis thaliana]
Length = 588
Score = 159 bits (386), Expect = 2e-39
Identities = 84/212 (39%), Positives = 126/212 (59%), Gaps = 1/212 (0%)
Frame = +2
Query: 92 SVLIVDGVGAKCAELLNAYGIATTTKAKISKEELLMEIPNHDALVVRSATQVTKEVLDAG 271
++L+ + +G +LL Y + +S EEL +I DAL+VRS T+V ++V ++
Sbjct: 48 TILVTEKLGQAGIDLLKKYANVDCSY-DLSLEELCTKISLCDALIVRSGTKVGRDVFESS 106
Query: 272 V-KLKVVGRAGAGVDNIDVDSAGKKGVGVINAPGANALSACELTCTLMLVLARHVVPAST 448
+LKVVGRAG G+DN+D+ +A + G V+NAP AN ++A E L+ +AR++ A
Sbjct: 107 RGRLKVVGRAGVGIDNVDLAAATEYGCLVVNAPTANTVAAAEHGIALLTAMARNIAQADA 166
Query: 449 ALKAGRWDRALYTGSELAGKTLAILGLGRVGREVATRMYAFGMNIIGFDPFVSADQCAQF 628
++KAG+W R Y G L GKTLA+LG G+VG EVA R GM++I DP+ AD+
Sbjct: 167 SIKAGKWTRNKYVGVSLVGKTLAVLGFGKVGSEVARRARGLGMHVITHDPYAPADRARAI 226
Query: 629 HCTKMELEDIWPLADYITLHTPLIXSTRNFIN 724
+ E AD+I+LH PL +T +N
Sbjct: 227 GVELVSFEVAISTADFISLHLPLTAATSKMMN 258
>At4g34200.1 68417.m04854 D-3-phosphoglycerate dehydrogenase,
putative / 3-PGDH, putative similar to phosphoglycerate
dehydrogenase, Arabidopsis thaliana, SP:O04130
Length = 603
Score = 158 bits (383), Expect = 4e-39
Identities = 80/184 (43%), Positives = 114/184 (61%), Gaps = 1/184 (0%)
Frame = +2
Query: 176 ISKEELLMEIPNHDALVVRSATQVTKEVLDAGV-KLKVVGRAGAGVDNIDVDSAGKKGVG 352
++ EEL ++I DAL+VRS T+V +EV ++ +LKVVGRAG G+DN+D+ +A + G
Sbjct: 90 MTPEELNIKISLCDALIVRSGTKVGREVFESSHGRLKVVGRAGVGIDNVDLSAATEFGCL 149
Query: 353 VINAPGANALSACELTCTLMLVLARHVVPASTALKAGRWDRALYTGSELAGKTLAILGLG 532
V+NAP AN ++A E LM +AR+V A ++KAG W R Y G L GKTLA+LG G
Sbjct: 150 VVNAPTANTIAAAEHGIALMAAMARNVAQADASVKAGEWKRNKYVGVSLVGKTLAVLGFG 209
Query: 533 RVGREVATRMYAFGMNIIGFDPFVSADQCAQFHCTKMELEDIWPLADYITLHTPLIXSTR 712
+VG EVA R GM +I DP+ AD+ + ++ AD+I+LH PL +T
Sbjct: 210 KVGTEVARRAKGLGMRVIAHDPYAPADRAHAIGVDLVSFDEALATADFISLHMPLTPTTS 269
Query: 713 NFIN 724
+N
Sbjct: 270 KILN 273
>At5g14780.1 68418.m01734 formate dehydrogenase (FDH) identical to
GI:7677266
Length = 384
Score = 87.4 bits (207), Expect = 9e-18
Identities = 56/188 (29%), Positives = 90/188 (47%), Gaps = 6/188 (3%)
Frame = +2
Query: 188 ELLMEIPNHDALVVRS--ATQVTKEVLDAGVKLKVVGRAGAGVDNIDVDSAGKKGVGVIN 361
EL IP+ L+ VT E + LK++ AG G D+ID+ +A G+ V
Sbjct: 88 ELEKHIPDLHVLISTPFHPAYVTAERIKKAKNLKLLLTAGIGSDHIDLQAAAAAGLTVAE 147
Query: 362 APGANALSACELTCTLMLVLARHVVPASTALKAGRWDRA--LYTGSELAGKTLAILGLGR 535
G+N +S E +L+L R+ VP + G W+ A Y +L GKT+ +G GR
Sbjct: 148 VTGSNVVSVAEDELMRILILMRNFVPGYNQVVKGEWNVAGIAYRAYDLEGKTIGTVGAGR 207
Query: 536 VGREVATRMYAFGMNIIGFDPFVSADQCAQFHCTKM--ELEDIWPLADYITLHTPLIXST 709
+G+ + R+ FG N++ D A + + K +L ++ P D I ++ PL T
Sbjct: 208 IGKLLLQRLKPFGCNLLYHDRLQMAPELEKETGAKFVEDLNEMLPKCDVIVINMPLTEKT 267
Query: 710 RNFINADV 733
R N ++
Sbjct: 268 RGMFNKEL 275
>At1g79870.1 68414.m09330 oxidoreductase family protein contains
Pfam profile: PF02826 D-isomer specific 2-hydroxyacid
dehydrogenase, NAD binding domain; similar to glyoxylate
reductase from Thermococcus litoralis [gi:13515409]
Length = 313
Score = 72.9 bits (171), Expect = 2e-13
Identities = 42/173 (24%), Positives = 84/173 (48%), Gaps = 1/173 (0%)
Frame = +2
Query: 218 ALVVRSATQVTKEVLDAGVKLKVVGRAGAGVDNIDVDSAGKKGVGVINAPGANALSACEL 397
A+V ++ +++ L++V G+D ID+ +KG+ V N P +L
Sbjct: 48 AVVGNASAGADAQLISDLPNLEIVSSFSVGLDKIDLGKCKEKGIRVTNTPDVLTEDVADL 107
Query: 398 TCTLMLVLARHVVPASTALKAGRWDRALY-TGSELAGKTLAILGLGRVGREVATRMYAFG 574
L+L L R + +++G+W + + ++ +GK++ I+GLGR+G +A R AF
Sbjct: 108 AIGLILALLRRLCECDRYVRSGKWKQGEFQLTTKFSGKSVGIIGLGRIGTAIAKRAEAFS 167
Query: 575 MNIIGFDPFVSADQCAQFHCTKMELEDIWPLADYITLHTPLIXSTRNFINADV 733
I + + D +++ T ++L +D + + PL TR+ ++ V
Sbjct: 168 CPINYYSRTIKPDVAYKYYPTVVDLAQ---NSDILVVACPLTEQTRHIVDRQV 217
>At1g68010.1 68414.m07769 glycerate dehydrogenase / NADH-dependent
hydroxypyruvate reductase identical to hydroxypyruvate
reductase (HPR) GB:D85339 [Arabidopsis thaliana] (Plant
Cell Physiol 1997 Apr;38(4):449-55)
Length = 386
Score = 72.5 bits (170), Expect = 3e-13
Identities = 40/113 (35%), Positives = 59/113 (52%), Gaps = 4/113 (3%)
Frame = +2
Query: 281 KVVGRAGAGVDNIDVDSAGKKGVGVINAPGANALSACELTCTLMLVLARHVVPASTALKA 460
K G +N+DV++A K G+ V N PG + EL +L L AR +V A ++
Sbjct: 88 KAFSNMAVGYNNVDVEAANKYGIAVGNTPGVLTETTAELAASLSLAAARRIVEADEFMRG 147
Query: 461 G---RWDRALYTGSELAGKTLAILGLGRVGREVATRMY-AFGMNIIGFDPFVS 607
G W L+ G+ L G+T+ ++G GR+G A M F MN+I FD + S
Sbjct: 148 GLYEGWLPHLFVGNLLKGQTVGVIGAGRIGSAYARMMVEGFKMNLIYFDLYQS 200
>At1g72190.1 68414.m08347 oxidoreductase family protein similar to
D-3-phosphoglycerate dehydrogenase from Arabidopsis
thaliana [SP|O04130], glyoxylate reductase from Homo
sapiens (gi:6002730); contains Pfam D-isomer specific
2-hydroxyacid dehydrogenase, NAD binding domain PF02826
Length = 373
Score = 68.5 bits (160), Expect = 4e-12
Identities = 53/186 (28%), Positives = 83/186 (44%), Gaps = 9/186 (4%)
Frame = +2
Query: 200 EIPNHDALVVRSATQVTKEVLDAGVKLKVVGRAGAGVDNIDVDSAGKKGVGVINAPG--- 370
E+ + + V Q+ V+ +K++ + G G+D +D+D+A K G+ V P
Sbjct: 90 EVIKNYHICVAMTMQMDSNVISRASNIKLIMQYGVGLDGVDIDAATKHGIKVARIPSEGT 149
Query: 371 ANALSACELTCTLMLVLARHVVPASTALKAGRWDRALYTGSELAGKTLAILGLGRVGREV 550
NA S E+ LML L + +L+ TG L GKT+ ILG G +G E+
Sbjct: 150 GNAASCSEMAIYLMLGLLKKQNEMQISLRNRLLGEP--TGDTLLGKTVFILGYGNIGIEL 207
Query: 551 ATRMYAFGMNIIG---FDPFVSADQCAQFHCTKMELEDIWPL---ADYITLHTPLIXSTR 712
A R+ FG +I F P D ++ K EDI+ AD + + L T
Sbjct: 208 AKRLKPFGSRVIATKRFWPASIVDSDSRLVDEKGSHEDIYTFAGKADIVVVCLRLNKETA 267
Query: 713 NFINAD 730
+N +
Sbjct: 268 EIVNKE 273
>At2g45630.2 68415.m05674 oxidoreductase family protein low
similarity to SP|P36234 Glycerate dehydrogenase (EC
1.1.1.29) (NADH-dependent hydroxypyruvate reductase)
{Hyphomicrobium methylovorum}; contains Pfam profile
PF00389: D-isomer specific 2-hydroxyacid dehydrogenase,
catalytic domain
Length = 338
Score = 67.7 bits (158), Expect = 7e-12
Identities = 48/174 (27%), Positives = 86/174 (49%), Gaps = 2/174 (1%)
Frame = +2
Query: 218 ALVVRSATQVTKEVLDAGVKLKVVGRAGAGVDNIDVDSAGKKGVGVINAPGANALSACEL 397
A++ A VT +++ L++V AGVD++D+ ++G+ V NA + + +
Sbjct: 71 AIIAPVAAPVTADLIRILPNLRLVVTTSAGVDHVDLVECRRRGISVANAGSSFSEDVADT 130
Query: 398 TCTLMLVLARHVVPASTALKAGRWD-RALYT-GSELAGKTLAILGLGRVGREVATRMYAF 571
L++ + R + A+ +K W + Y GS+L K + I+GLG +G +VATR+ AF
Sbjct: 131 AVGLLIDVFRRISAANRFVKQRFWPLKGDYPLGSKLGRKRIGIVGLGSIGSKVATRLDAF 190
Query: 572 GMNIIGFDPFVSADQCAQFHCTKMELEDIWPLADYITLHTPLIXSTRNFINADV 733
G I + +H M++E++ +D + + L T IN DV
Sbjct: 191 GCQ-ISYSSRNRKPYDVPYH-YYMDIEEMAANSDALIICCELNEKTLRLINKDV 242
>At1g12550.1 68414.m01455 oxidoreductase family protein similar to
glyoxylate reductase from Homo sapiens (gi:6002730);
contains Pfam D-isomer specific 2-hydroxyacid
dehydrogenase, NAD binding domain PF02826
Length = 323
Score = 65.7 bits (153), Expect = 3e-11
Identities = 52/194 (26%), Positives = 92/194 (47%), Gaps = 9/194 (4%)
Frame = +2
Query: 179 SKEELLMEIPNHD----ALVVRSATQVTKEVLDAGVKLKVVGRAGAGVDNIDVDSAGKKG 346
S E L P H A V+ VT E+L L+++ G+D+ID+ + ++G
Sbjct: 38 SSESLPSFFPRHASSARAFVISGRLPVTDELLSHLPSLQILVCTSVGIDHIDLAACKRRG 97
Query: 347 VGVINAPGANALSACELTCTLMLVLARHVVPASTALKAGRWDRA--LYTGSELAGKTLAI 520
+ + NA A + + L++ + R + A +++G W + GS+++GK + I
Sbjct: 98 IVITNAGNAFSDDVADCAVGLLISVLRRIPAADRYVRSGNWAKFGDFQLGSKVSGKRVGI 157
Query: 521 LGLGRVGREVATRMYAFGMNIIGFDPFVSADQCAQFHCTKMELEDIWPLA---DYITLHT 691
+GLG +G VA R+ +FG +I ++ S Q + + DI LA D + L
Sbjct: 158 VGLGSIGSFVAKRLESFGC-VISYNS-RSQKQSSPYR----YYSDILSLAENNDVLVLCC 211
Query: 692 PLIXSTRNFINADV 733
L T + +N +V
Sbjct: 212 SLTDETHHIVNREV 225
>At3g28790.1 68416.m03593 expressed protein
Length = 608
Score = 36.3 bits (80), Expect = 0.021
Identities = 17/40 (42%), Positives = 22/40 (55%)
Frame = -3
Query: 381 SALAPGALITPTPFLPAESTSMLSTPAPARPTTFSFTPAS 262
S +P TPTP P ST STP P+ PT + TP++
Sbjct: 271 SGASPSGSPTPTPSTPTPSTPTPSTPTPSTPTPSTPTPST 310
Score = 33.9 bits (74), Expect = 0.11
Identities = 24/80 (30%), Positives = 35/80 (43%)
Frame = -3
Query: 453 SAVEAGTTWRARTNINVQVSSHALSALAPGALITPTPFLPAESTSMLSTPAPARPTTFSF 274
S +G T++ T + S P TPTP P ST STP P+ PT
Sbjct: 255 SGGSSGNTYKDTTGSSSGASPSGSPTPTPS---TPTPSTPTPSTPTPSTPTPSTPT--PS 309
Query: 273 TPASNTSLVT*VAERTTRAS 214
TPA +T +E+ + ++
Sbjct: 310 TPAPSTPAAGKTSEKGSESA 329
>At2g45000.1 68415.m05603 expressed protein contains Pfam profile:
PF05064 Nsp1-like C-terminal region
Length = 739
Score = 34.7 bits (76), Expect = 0.064
Identities = 25/93 (26%), Positives = 42/93 (45%)
Frame = -3
Query: 531 PRPRMARVLPASSLPVYRARSHLPAFSAVEAGTTWRARTNINVQVSSHALSALAPGALIT 352
P +A P SS ++ A P+FS + + + +I S + A T
Sbjct: 232 PSFSVASSAPGSSSSIFGATGSSPSFSVASSASG--SSPSIFGATGSSPFFGSSSSAGST 289
Query: 351 PTPFLPAESTSMLSTPAPARPTTFSFTPASNTS 253
P+ F + S + S+P+P +TF+ + SNTS
Sbjct: 290 PSLFASSSSGATTSSPSPFGVSTFNSSSTSNTS 322
>At1g01510.1 68414.m00067 C-terminal binding protein (ANGUSTIFOLIA)
nearly identical to C-terminal binding protein
ANGUSTIFOLIA [Arabidopsis thaliana] GI:15408535;
contains Pfam profile PF02826: D-isomer specific
2-hydroxyacid dehydrogenase, NAD binding domain
Length = 636
Score = 34.3 bits (75), Expect = 0.085
Identities = 39/149 (26%), Positives = 65/149 (43%), Gaps = 11/149 (7%)
Frame = +2
Query: 317 IDVDSAGKKGVGVINAPGANALSACELTCTLMLVLARHVVPAST-ALKAGRWDRALYT-- 487
+D A G+ +++ + A + L+L L R S AL A W +L
Sbjct: 96 VDSTLAADLGLRLVHVDTSRAEEIADTVMALILGLLRRTHLLSRHALSASGWLGSLQPLC 155
Query: 488 --GSELAGKTLAILGLGRVGREVATRMYAFGMNIIGFD-PFVSADQC--AQFH--CTKME 646
G L I+G R +A+R AF M+++ FD P ++ ++F +M+
Sbjct: 156 RGMRRCRGMVLGIVGRSVSARYLASRSLAFKMSVLYFDVPEGDEERIRPSRFPRAARRMD 215
Query: 647 -LEDIWPLADYITLHTPLIXSTRNFINAD 730
L D+ +D I+LH L T +NA+
Sbjct: 216 TLNDLLAASDVISLHCALTNDTVQILNAE 244
>At5g28310.1 68418.m03437 oxidoreductase-related low similarity to
glyoxylate reductase from Thermococcus litoralis
[gi:13515409]
Length = 233
Score = 33.1 bits (72), Expect = 0.20
Identities = 14/26 (53%), Positives = 19/26 (73%)
Frame = +2
Query: 506 KTLAILGLGRVGREVATRMYAFGMNI 583
K + I+GLG +G +VATR+ AFG I
Sbjct: 115 KRIGIVGLGSIGSKVATRLKAFGCQI 140
>At1g15290.1 68414.m01830 tetratricopeptide repeat (TPR)-containing
protein ESTs gb|F20110 and gb|F20109 come from this gene;
contains Pfam profile PF00515: TPR Domain
Length = 1558
Score = 30.7 bits (66), Expect = 1.0
Identities = 18/52 (34%), Positives = 26/52 (50%), Gaps = 1/52 (1%)
Frame = +1
Query: 94 GFDRRRGWRQVCRTPQR-LRNRHHHQGQDLQGRTSYGDTQPRRSGCAFSNSS 246
G R+ RQ +R L N+HH++ QD+Q + Y Q G + S SS
Sbjct: 1165 GAGRKSRQRQPDLMKKRMLLNKHHNRNQDVQQQNIYSPLQKTSKGPSLSKSS 1216
>At4g35240.1 68417.m05009 expressed protein contains Pfam domains,
PF04782: Protein of unknown function (DUF632) and
PF04783: Protein of unknown function (DUF630)
Length = 828
Score = 29.9 bits (64), Expect = 1.8
Identities = 14/34 (41%), Positives = 16/34 (47%)
Frame = -2
Query: 535 PAKAKDGEGLASELAASVQSPVPPASLQRSGSWD 434
P G AS AA+ + P PP S RS WD
Sbjct: 246 PGPGYYGSSSASTTAAATKPPPPPPSPPRSNGWD 279
>At1g65960.1 68414.m07484 glutamate decarboxylase 2 (GAD 2) similar
to glutamate decarboxylase (gad) GI:294111 from [Petunia
hybrida]
Length = 494
Score = 29.9 bits (64), Expect = 1.8
Identities = 16/46 (34%), Positives = 28/46 (60%), Gaps = 1/46 (2%)
Frame = +2
Query: 71 KMVVDIKSVLI-VDGVGAKCAELLNAYGIATTTKAKISKEELLMEI 205
++V DI VL +D + +K ++ + GIA K K ++E+LME+
Sbjct: 431 RLVADISKVLHELDTLPSKISKKMGIEGIAENVKEKKMEKEILMEV 476
>At1g23180.1 68414.m02896 armadillo/beta-catenin repeat family
protein contains Pfam profile: PF00514
armadillo/beta-catenin-like repeat
Length = 834
Score = 29.9 bits (64), Expect = 1.8
Identities = 22/80 (27%), Positives = 38/80 (47%)
Frame = +2
Query: 197 MEIPNHDALVVRSATQVTKEVLDAGVKLKVVGRAGAGVDNIDVDSAGKKGVGVINAPGAN 376
ME ++ V S KEVLDA V ++V A N+ ++ G+I+ P +
Sbjct: 544 MESKFYEGPVNGSKADSRKEVLDAAVFSRLVQIAKTASPNLLRNAISVIEFGIISNPNMD 603
Query: 377 ALSACELTCTLMLVLARHVV 436
+ + ++T L L L + V+
Sbjct: 604 TIISKDITTVLDLALRQKVL 623
>At1g79410.1 68414.m09254 transporter-related low similarity to
organic anion transporter 3 [Rattus norvegicus]
GI:5545293; contains Pfam profile PF00083: major
facilitator superfamily protein
Length = 515
Score = 29.5 bits (63), Expect = 2.4
Identities = 14/44 (31%), Positives = 25/44 (56%)
Frame = +2
Query: 482 YTGSELAGKTLAILGLGRVGREVATRMYAFGMNIIGFDPFVSAD 613
Y GS + G LA++ G +GR+ +F M++ G F+S++
Sbjct: 126 YVGSIVGGVVLAMIPDGSLGRKQLLFFSSFAMSLTGISIFLSSN 169
>At1g49870.1 68414.m05591 expressed protein ; expression supported
by MPSS
Length = 828
Score = 29.1 bits (62), Expect = 3.2
Identities = 18/72 (25%), Positives = 39/72 (54%), Gaps = 3/72 (4%)
Frame = +2
Query: 77 VVDIKSVLI---VDGVGAKCAELLNAYGIATTTKAKISKEELLMEIPNHDALVVRSATQV 247
+ D++S+L+ V G+ + E + G K +++ L E+P+ D+ +V+ +++
Sbjct: 480 IPDLESLLVKKHVSGLEKEVQETIKNCGKMYENVKKPGRKDGLSEVPSLDSCLVKHFSKL 539
Query: 248 TKEVLDAGVKLK 283
KEV +A + K
Sbjct: 540 EKEVQEAKKRSK 551
>At1g30950.1 68414.m03790 unusual floral organ (UFO) / F-box family
protein (FBX1) E3 ubiquitin ligase SCF complex F-box
subunit; almost identical to unusual floral organs
(UFO)GI:4376159 from [Arabidopsis thaliana]
Landsberg-erecta; one amino acid difference
Length = 442
Score = 29.1 bits (62), Expect = 3.2
Identities = 11/41 (26%), Positives = 23/41 (56%)
Frame = -3
Query: 330 ESTSMLSTPAPARPTTFSFTPASNTSLVT*VAERTTRASWL 208
+ST ++ P+ P +++FT +SN+S T ++ W+
Sbjct: 2 DSTVFINNPSLTLPFSYTFTSSSNSSTTTSTTTDSSSGQWM 42
>At1g01390.1 68414.m00054 UDP-glucoronosyl/UDP-glucosyl transferase
family protein contains Pfam profile: PF00201
UDP-glucoronosyl and UDP-glucosyl transferase
Length = 480
Score = 29.1 bits (62), Expect = 3.2
Identities = 14/40 (35%), Positives = 19/40 (47%)
Frame = -3
Query: 372 APGALITPTPFLPAESTSMLSTPAPARPTTFSFTPASNTS 253
A G L+ L + + L PAP +PT + P NTS
Sbjct: 207 AKGILVNSFVDLESNAIKALQEPAPDKPTVYPIGPLVNTS 246
>At4g15300.1 68417.m02342 cytochrome P450 family protein similar to
Cytochrome P450 90C1 (ROTUNDIFOLIA3) (SP:Q9M066)
[Arabidopsis thaliana]; contains Pfam profile: PF00067:
Cytochrome P450
Length = 487
Score = 28.7 bits (61), Expect = 4.2
Identities = 11/34 (32%), Positives = 20/34 (58%), Gaps = 3/34 (8%)
Frame = +1
Query: 457 GWQ-VGPGSVHWQRARWQDPR--HPWPWQGRPRG 549
GW +G +H+ +++DP +PW W+G+ G
Sbjct: 383 GWTFMGYPHIHFNSEKYEDPYAFNPWRWEGKDLG 416
>At2g29210.1 68415.m03550 splicing factor PWI domain-containing
protein contains Pfam profile PF01480: PWI domain
Length = 878
Score = 28.7 bits (61), Expect = 4.2
Identities = 24/71 (33%), Positives = 32/71 (45%), Gaps = 1/71 (1%)
Frame = +1
Query: 10 PDARRRRTPASSLTTIALPNQDGRGH*VGFDRRRGWRQVCRTPQRLRNRHHH-QGQDLQG 186
PD RRRR+P+SS + + H R R ++ R+P RL Q L
Sbjct: 603 PDRRRRRSPSSSRSP-SRSRSPPVLHRSPSPRGRKHQRERRSPGRLSEEQDRVQNSKLLK 661
Query: 187 RTSYGDTQPRR 219
RTS DT R+
Sbjct: 662 RTSVPDTDKRK 672
>At1g78490.1 68414.m09149 cytochrome P450 family protein similar to
Cytochrome P450 90A1 (SP:Q42569) [Arabidopsis thaliana]
Length = 479
Score = 28.7 bits (61), Expect = 4.2
Identities = 12/32 (37%), Positives = 20/32 (62%), Gaps = 4/32 (12%)
Frame = +1
Query: 457 GW--QVGPGSVHWQRARWQDP--RHPWPWQGR 540
GW V P +VH+ A +++P +PW W+G+
Sbjct: 376 GWIVAVAPSAVHFDPAIYENPFEFNPWRWEGK 407
>At4g13940.1 68417.m02157 adenosylhomocysteinase /
S-adenosyl-L-homocysteine hydrolase / AdoHcyase (SAHH)
identical to SP|O23255 Adenosylhomocysteinase (EC
3.3.1.1) (S-adenosyl-L-homocysteine hydrolase)
(AdoHcyase) {Arabidopsis thaliana}; strong similarity to
SP|P50248 Adenosylhomocysteinase (EC 3.3.1.1) {Nicotiana
sylvestris}
Length = 485
Score = 28.3 bits (60), Expect = 5.6
Identities = 22/67 (32%), Positives = 28/67 (41%), Gaps = 2/67 (2%)
Frame = +2
Query: 497 LAGKTLAILGLGRVGREVATRMYAFGMNII--GFDPFVSADQCAQFHCTKMELEDIWPLA 670
+AGK I G G VG+ A M G +I DP + A Q + LED+ A
Sbjct: 260 IAGKVAVICGYGDVGKGCAAAMKTAGARVIVTEIDP-ICALQALMEGLQVLTLEDVVSEA 318
Query: 671 DYITLHT 691
D T
Sbjct: 319 DIFVTTT 325
>At4g11420.1 68417.m01840 eukaryotic translation initiation factor 3
subunit 10 / eIF-3 theta / eIF3a (TIF3A1) identical to
eukaryotic translation initiation factor 3 subunit 10
(eIF-3 theta) (Eukaryotic translation initiation factor 3
large subunit) (eIF3a) (p114). [Arabidopsis thaliana]
SWISS-PROT:Q9LD55
Length = 987
Score = 27.9 bits (59), Expect = 7.4
Identities = 12/30 (40%), Positives = 16/30 (53%)
Frame = -1
Query: 473 GPTCQPSAQWKLGPRGEPEPTSTCRSARTR 384
GP + +W GPRG + ST S+R R
Sbjct: 954 GPPAEGGDRWGSGPRGSDDRRSTFGSSRPR 983
>At3g23810.1 68416.m02993 adenosylhomocysteinase, putative /
S-adenosyl-L-homocysteine hydrolase, putative /
AdoHcyase, putative strong similarity to
SP|P50248|SAHH_TOBAC Adenosylhomocysteinase (EC 3.3.1.1)
(S-adenosyl-L-homocysteine hydrolase) (AdoHcyase)
{Nicotiana sylvestris}; contains Pfam profile PF00670:
S-adenosyl-L-homocysteine hydrolase, NAD binding domain
Length = 485
Score = 27.9 bits (59), Expect = 7.4
Identities = 21/61 (34%), Positives = 27/61 (44%), Gaps = 2/61 (3%)
Frame = +2
Query: 497 LAGKTLAILGLGRVGREVATRMYAFGMNII--GFDPFVSADQCAQFHCTKMELEDIWPLA 670
+AGK I G G VG+ A M G +I DP + A Q + LED+ A
Sbjct: 260 IAGKVAVICGYGDVGKGCAAAMKTAGARVIVTEIDP-ICALQALMEGLQVLTLEDVVSEA 318
Query: 671 D 673
D
Sbjct: 319 D 319
>At3g19160.1 68416.m02433 adenylate isopentenyltransferase 8 /
adenylate dimethylallyltransferase / cytokinin synthase
(IPT8) identical to adenylate isopentenyltransferase
(IPT8) [Arabidopsis thaliana] GI:14279068
Length = 330
Score = 27.9 bits (59), Expect = 7.4
Identities = 19/73 (26%), Positives = 32/73 (43%), Gaps = 3/73 (4%)
Frame = +2
Query: 230 RSATQVTKEVLDAGVKLKVV---GRAGAGVDNIDVDSAGKKGVGVINAPGANALSACELT 400
RS +T ++ K KVV G G+G + +D A + ++N+ ++T
Sbjct: 27 RSVVPMTTVCMEQSYKQKVVVIMGATGSGKSCLSIDLATRFSGEIVNSDKIQFYDGLKVT 86
Query: 401 CTLMLVLARHVVP 439
M +L R VP
Sbjct: 87 TNQMSILERCGVP 99
>At1g72680.1 68414.m08405 cinnamyl-alcohol dehydrogenase, putative
similar to cinnamyl-alcohol dehydrogenase GB:AAC35846
[Medicago sativa], SP|Q08350 [Picea abies]
Length = 355
Score = 27.9 bits (59), Expect = 7.4
Identities = 12/35 (34%), Positives = 20/35 (57%)
Frame = +2
Query: 503 GKTLAILGLGRVGREVATRMYAFGMNIIGFDPFVS 607
GK+L ++GLG +G AFG+++ F +S
Sbjct: 182 GKSLGVIGLGGLGHMAVKFGKAFGLSVTVFSTSIS 216
>At1g13530.1 68414.m01586 expressed protein ; expression supported
by MPSS
Length = 385
Score = 27.9 bits (59), Expect = 7.4
Identities = 11/32 (34%), Positives = 19/32 (59%)
Frame = +1
Query: 442 FHCAEGWQVGPGSVHWQRARWQDPRHPWPWQG 537
F +E ++G GSV +R +W++ R W +G
Sbjct: 296 FGVSETQKIGIGSVVLERMKWEEERFGWSKKG 327
>At1g06460.1 68414.m00684 31.2 kDa small heat shock family protein /
hsp20 family protein contains Pfam profile: PF00011
Hsp20/alpha crystallin family
Length = 285
Score = 27.9 bits (59), Expect = 7.4
Identities = 17/67 (25%), Positives = 28/67 (41%), Gaps = 1/67 (1%)
Frame = -3
Query: 552 ATSRPTLPRPRMARVL-PASSLPVYRARSHLPAFSAVEAGTTWRARTNINVQVSSHALSA 376
A + P +P + P+ S + + R L GT W R+N+ S+ ++
Sbjct: 142 AYAAPHFSKPAKEDIFFPSLSPNLQKERPKLDLPKLANLGTVWSPRSNVAESTHSYVVAI 201
Query: 375 LAPGALI 355
PGA I
Sbjct: 202 ELPGASI 208
>At5g52910.1 68418.m06566 timeless family protein contains Pfam
domains PF05029: Timeless protein C terminal region and
PF04821: Timeless protein
Length = 1141
Score = 27.5 bits (58), Expect = 9.8
Identities = 16/41 (39%), Positives = 18/41 (43%)
Frame = -2
Query: 613 ISRHERVESDDVHAEGVHPSGHLAADPAKAKDGEGLASELA 491
I+R R DVH PS L DP + D E ELA
Sbjct: 1067 ITRESRQSETDVHISDNGPSTSLPEDPNLSSDNELEDDELA 1107
>At5g11430.1 68418.m01335 transcription elongation factor-related
contains weak similarity to transcription elongation
factors
Length = 871
Score = 27.5 bits (58), Expect = 9.8
Identities = 30/104 (28%), Positives = 43/104 (41%), Gaps = 3/104 (2%)
Frame = -3
Query: 489 PVYRARSHLPAFSAVEAGTTWRARTNINVQVSSHALSALAPG-ALITPTPFLPA--ESTS 319
PV + H+P + +A +N V S +LA AL+ P E+
Sbjct: 84 PVVNKKQHVPP-----PQRSVKAMEEVNESVRSKMRESLASALALVKKDDDSPKGKENIG 138
Query: 318 MLSTPAPARPTTFSFTPASNTSLVT*VAERTTRASWLGISIRSS 187
+ TP + T SF PAS S+ V E T S + S+ SS
Sbjct: 139 TVETPVITQENTQSFQPASPASISVPVGEGT--MSEMPTSVESS 180
>At3g30290.1 68416.m03825 cytochrome P450 family protein similar to
Cytochrome P450 85 (SP:Q43147) {Lycopersicon
esculentum}; similar to GB:C71417 from [Arabidopsis
thaliana] (Nature 391 (6666), 485-488 (1998))
Length = 408
Score = 27.5 bits (58), Expect = 9.8
Identities = 11/30 (36%), Positives = 18/30 (60%), Gaps = 3/30 (10%)
Frame = +1
Query: 457 GWQ-VGPGSVHWQRARWQDPR--HPWPWQG 537
GW +G S H+ +++DP +PW W+G
Sbjct: 301 GWNFMGYPSAHFDPTKYEDPLEFNPWRWKG 330
>At1g62760.1 68414.m07083 invertase/pectin methylesterase inhibitor
family protein low similarity to extensin [Volvox
carteri] GI:21992
Length = 312
Score = 27.5 bits (58), Expect = 9.8
Identities = 15/45 (33%), Positives = 28/45 (62%)
Frame = -3
Query: 396 SSHALSALAPGALITPTPFLPAESTSMLSTPAPARPTTFSFTPAS 262
SS LS+L+P ++P+P + S++ S+ +P+ P S +P+S
Sbjct: 74 SSSPLSSLSPS--LSPSPPSSSPSSAPPSSLSPSSPPPLSLSPSS 116
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,430,641
Number of Sequences: 28952
Number of extensions: 322381
Number of successful extensions: 1259
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 1152
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1241
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1614253080
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -