Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmov10h22
         (532 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292379-1|CAL23191.2|  376|Tribolium castaneum gustatory recept...    21   5.1  
AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory recept...    21   6.8  
AJ223627-1|CAA11500.1|  371|Tribolium castaneum orthodenticle-1 ...    21   8.9  

>AM292379-1|CAL23191.2|  376|Tribolium castaneum gustatory receptor
           candidate 58 protein.
          Length = 376

 Score = 21.4 bits (43), Expect = 5.1
 Identities = 6/19 (31%), Positives = 13/19 (68%)
 Frame = -3

Query: 299 CWLFIISPVCHFCLFFSRR 243
           C+L+++  +C+  L F +R
Sbjct: 176 CYLWVLILICNIALAFKQR 194


>AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory receptor
           candidate 59 protein.
          Length = 489

 Score = 21.0 bits (42), Expect = 6.8
 Identities = 7/19 (36%), Positives = 10/19 (52%)
 Frame = +1

Query: 67  HINSTLWYCRLSLVRLYPI 123
           H N+T W C    + LY +
Sbjct: 155 HCNNTTWRCLYRWIVLYTL 173


>AJ223627-1|CAA11500.1|  371|Tribolium castaneum orthodenticle-1
           protein protein.
          Length = 371

 Score = 20.6 bits (41), Expect = 8.9
 Identities = 10/30 (33%), Positives = 14/30 (46%)
 Frame = -3

Query: 488 HGTNSLINLFTY**QFSPLFWSETYPFFTW 399
           HG+N+   + T     SPL +   Y  F W
Sbjct: 257 HGSNTSSLITTPSPSASPLAYQHEYNSFNW 286


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 99,310
Number of Sequences: 336
Number of extensions: 1878
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12887571
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)