Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmov10h22
(532 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g09250.1 68418.m01067 transcriptional coactivator p15 (PC4) f... 74 7e-14
At4g10920.1 68417.m01775 transcriptional coactivator p15 (PC4) f... 57 6e-09
At5g09240.1 68418.m01061 transcriptional coactivator p15 (PC4) f... 50 7e-07
At5g09240.2 68418.m01062 transcriptional coactivator p15 (PC4) f... 40 0.001
At5g09240.3 68418.m01063 transcriptional coactivator p15 (PC4) f... 32 0.28
At4g31990.2 68417.m04554 aspartate aminotransferase, chloroplast... 29 1.5
At4g31990.1 68417.m04553 aspartate aminotransferase, chloroplast... 29 1.5
At1g56660.1 68414.m06516 expressed protein 29 2.6
At1g69830.1 68414.m08034 alpha-amylase, putative / 1,4-alpha-D-g... 28 4.5
At2g43200.1 68415.m05369 dehydration-responsive family protein s... 27 6.0
>At5g09250.1 68418.m01067 transcriptional coactivator p15 (PC4)
family protein similar to SP|P11031 Activated RNA
polymerase II transcriptional coactivator p15 precursor
(PC4) (p14) (Single-stranded DNA binding protein p9)
{Mus musculus}; contains Pfam profile PF02229:
Transcriptional Coactivator p15 (PC4)
Length = 107
Score = 73.7 bits (173), Expect = 7e-14
Identities = 34/87 (39%), Positives = 57/87 (65%), Gaps = 2/87 (2%)
Frame = +3
Query: 234 DRNPPAEKKAKMADRTNDKEPTWV--LQGKKLLKVREFKGKVYVDIREFYEKNGELLPGK 407
+ + PA+K AK AD ++ + V + + + VR + GK+++DIREFY K+G+ LPGK
Sbjct: 20 ETHAPAKKVAKPADDSDQSDDIVVCNISKNRRVSVRNWNGKIWIDIREFYVKDGKTLPGK 79
Query: 408 KGISLTPEQWRKLLSVGEEVNETVSSM 488
KGISL+ +QW L + E++ + +S +
Sbjct: 80 KGISLSVDQWNTLRNHAEDIEKALSDL 106
>At4g10920.1 68417.m01775 transcriptional coactivator p15 (PC4)
family protein (KELP) similar to SP|P53999 Activated RNA
polymerase II transcriptional coactivator p15 (PC4)
(p14) {Homo sapiens}; contains Pfam profile PF02229:
Transcriptional Coactivator p15 (PC4); supporting cDNA
gi|2997685|gb|AF053303.1|AF053303
Length = 165
Score = 57.2 bits (132), Expect = 6e-09
Identities = 25/44 (56%), Positives = 33/44 (75%)
Frame = +3
Query: 306 LQGKKLLKVREFKGKVYVDIREFYEKNGELLPGKKGISLTPEQW 437
L K+ + ++EFKGK V IRE+Y+K+G+ LP KGISLT EQW
Sbjct: 101 LSDKRRVTIQEFKGKSLVSIREYYKKDGKELPTSKGISLTDEQW 144
>At5g09240.1 68418.m01061 transcriptional coactivator p15 (PC4)
family protein similar to SP|P11031 Activated RNA
polymerase II transcriptional coactivator p15 precursor
(PC4) (p14) (Single-stranded DNA binding protein p9)
{Mus musculus}; contains Pfam profile PF02229:
Transcriptional Coactivator p15 (PC4)
Length = 110
Score = 50.4 bits (115), Expect = 7e-07
Identities = 28/87 (32%), Positives = 52/87 (59%), Gaps = 2/87 (2%)
Frame = +3
Query: 234 DRNPPAEKKAKMADRTNDKEPTWVLQGKKLLKVREFKGKVYVDIREFYEKNGELLP--GK 407
+ + P +K AK AD D + + +++ VR G++++ IR+F+ K+G LP K
Sbjct: 22 ETHAPPKKVAKPADEIEDIFICNLDKNRRVF-VRNCNGRIWIAIRQFFVKDGITLPCNSK 80
Query: 408 KGISLTPEQWRKLLSVGEEVNETVSSM 488
+GISL+ EQW L + E++++ +S +
Sbjct: 81 QGISLSLEQWNDLRNHEEDIDKALSEL 107
>At5g09240.2 68418.m01062 transcriptional coactivator p15 (PC4)
family protein similar to SP|P11031 Activated RNA
polymerase II transcriptional coactivator p15 precursor
(PC4) (p14) (Single-stranded DNA binding protein p9)
{Mus musculus}; contains Pfam profile PF02229:
Transcriptional Coactivator p15 (PC4)
Length = 138
Score = 39.5 bits (88), Expect = 0.001
Identities = 24/69 (34%), Positives = 41/69 (59%), Gaps = 2/69 (2%)
Frame = +3
Query: 234 DRNPPAEKKAKMADRTNDKEPTWVLQGKKLLKVREFKGKVYVDIREFYEKNGELLP--GK 407
+ + P +K AK AD D + + +++ VR G++++ IR+F+ K+G LP K
Sbjct: 22 ETHAPPKKVAKPADEIEDIFICNLDKNRRVF-VRNCNGRIWIAIRQFFVKDGITLPCNSK 80
Query: 408 KGISLTPEQ 434
+GISL+ EQ
Sbjct: 81 QGISLSLEQ 89
>At5g09240.3 68418.m01063 transcriptional coactivator p15 (PC4)
family protein similar to SP|P11031 Activated RNA
polymerase II transcriptional coactivator p15 precursor
(PC4) (p14) (Single-stranded DNA binding protein p9)
{Mus musculus}; contains Pfam profile PF02229:
Transcriptional Coactivator p15 (PC4)
Length = 120
Score = 31.9 bits (69), Expect = 0.28
Identities = 17/56 (30%), Positives = 32/56 (57%)
Frame = +3
Query: 234 DRNPPAEKKAKMADRTNDKEPTWVLQGKKLLKVREFKGKVYVDIREFYEKNGELLP 401
+ + P +K AK AD D + + +++ VR G++++ IR+F+ K+G LP
Sbjct: 22 ETHAPPKKVAKPADEIEDIFICNLDKNRRVF-VRNCNGRIWIAIRQFFVKDGITLP 76
>At4g31990.2 68417.m04554 aspartate aminotransferase, chloroplast /
transaminase A (ASP5) (AAT1) nearly identical to
SP|P46248 Aspartate aminotransferase, chloroplast
precursor (EC 2.6.1.1) (Transaminase A) {Arabidopsis
thaliana}
Length = 453
Score = 29.5 bits (63), Expect = 1.5
Identities = 20/49 (40%), Positives = 27/49 (55%), Gaps = 4/49 (8%)
Frame = +3
Query: 336 EFKGKVYVDIREFYEKNGELLPG----KKGISLTPEQWRKLLSVGEEVN 470
+F+G + DI+E E + LL G GI TPEQW K+ V +E N
Sbjct: 209 DFEGMI-ADIKEAPEGSFILLHGCAHNPTGIDPTPEQWVKIADVIQEKN 256
>At4g31990.1 68417.m04553 aspartate aminotransferase, chloroplast /
transaminase A (ASP5) (AAT1) nearly identical to
SP|P46248 Aspartate aminotransferase, chloroplast
precursor (EC 2.6.1.1) (Transaminase A) {Arabidopsis
thaliana}
Length = 453
Score = 29.5 bits (63), Expect = 1.5
Identities = 20/49 (40%), Positives = 27/49 (55%), Gaps = 4/49 (8%)
Frame = +3
Query: 336 EFKGKVYVDIREFYEKNGELLPG----KKGISLTPEQWRKLLSVGEEVN 470
+F+G + DI+E E + LL G GI TPEQW K+ V +E N
Sbjct: 209 DFEGMI-ADIKEAPEGSFILLHGCAHNPTGIDPTPEQWVKIADVIQEKN 256
>At1g56660.1 68414.m06516 expressed protein
Length = 522
Score = 28.7 bits (61), Expect = 2.6
Identities = 13/32 (40%), Positives = 19/32 (59%)
Frame = +3
Query: 225 GPEDRNPPAEKKAKMADRTNDKEPTWVLQGKK 320
GPE++N A+K+ K D + +KE GKK
Sbjct: 145 GPEEKNKKADKEKKHEDVSQEKEELEEEDGKK 176
>At1g69830.1 68414.m08034 alpha-amylase, putative /
1,4-alpha-D-glucan glucanohydrolase, putative similar to
SP|P17859 Alpha-amylase precursor (EC 3.2.1.1)
(1,4-alpha-D-glucan glucanohydrolase) {Vigna mungo},
alpha-amylase [Malus x domestica] GI:7532799; contains
Pfam profile PF00128: Alpha amylase, catalytic domain
Length = 887
Score = 27.9 bits (59), Expect = 4.5
Identities = 11/26 (42%), Positives = 18/26 (69%)
Frame = +3
Query: 327 KVREFKGKVYVDIREFYEKNGELLPG 404
++ + +GK+YV ++E EKN EL G
Sbjct: 92 RIEKAEGKIYVRLKEVKEKNWELSVG 117
>At2g43200.1 68415.m05369 dehydration-responsive family protein
similar to early-responsive to dehydration stress ERD3
protein [Arabidopsis thaliana] GI:15320410; contains
Pfam profile PF03141: Putative methyltransferase
Length = 611
Score = 27.5 bits (58), Expect = 6.0
Identities = 11/23 (47%), Positives = 18/23 (78%)
Frame = -1
Query: 373 NSLMSTYTFPLNSRTFSNFLPCN 305
+S +S+Y FPL + F+N+LPC+
Sbjct: 84 SSSLSSY-FPLCPKNFTNYLPCH 105
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,629,918
Number of Sequences: 28952
Number of extensions: 153389
Number of successful extensions: 424
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 410
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 423
length of database: 12,070,560
effective HSP length: 76
effective length of database: 9,870,208
effective search space used: 987020800
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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