BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bmov10h21 (560 letters) Database: bee 438 sequences; 146,343 total letters Searching......................................................done Score E Sequences producing significant alignments: (bits) Value DQ342041-1|ABC69933.1| 828|Apis mellifera STIP protein. 26 0.23 AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul... 23 2.8 AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A... 23 2.8 DQ435337-1|ABD92652.1| 135|Apis mellifera OBP20 protein. 22 4.9 DQ435336-1|ABD92651.1| 135|Apis mellifera OBP19 protein. 22 4.9 DQ015969-1|AAY81926.1| 397|Apis mellifera stargazin related pro... 22 4.9 EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage prot... 21 8.5 >DQ342041-1|ABC69933.1| 828|Apis mellifera STIP protein. Length = 828 Score = 26.2 bits (55), Expect = 0.23 Identities = 10/38 (26%), Positives = 20/38 (52%) Frame = -2 Query: 553 VLQTVHDLALNDKIDPYSVLYTLLYHEYLLFEVGQVPS 440 ++ + L L + D + L Y EY ++E+G++ S Sbjct: 382 LMDETNQLTLQETADAFKDLQDKYYEEYKMYELGELAS 419 >AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule AbsCAM-Ig7B protein. Length = 1923 Score = 22.6 bits (46), Expect = 2.8 Identities = 8/22 (36%), Positives = 14/22 (63%) Frame = -1 Query: 158 YNKLRNSSYTKLINETKKTLKH 93 Y +LR +YTK+++ L+H Sbjct: 754 YEELRERAYTKILSNGTLLLQH 775 >AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member AbsCAM-Ig7A protein. Length = 1919 Score = 22.6 bits (46), Expect = 2.8 Identities = 8/22 (36%), Positives = 14/22 (63%) Frame = -1 Query: 158 YNKLRNSSYTKLINETKKTLKH 93 Y +LR +YTK+++ L+H Sbjct: 750 YEELRERAYTKILSNGTLLLQH 771 >DQ435337-1|ABD92652.1| 135|Apis mellifera OBP20 protein. Length = 135 Score = 21.8 bits (44), Expect = 4.9 Identities = 10/29 (34%), Positives = 19/29 (65%), Gaps = 2/29 (6%) Frame = +2 Query: 254 EKTIEEI--LAADQEDESLRKYKEALLGQ 334 ++T+++I + D EDE ++Y E +L Q Sbjct: 41 QQTVDDINEVNFDVEDEKPQRYNECILKQ 69 >DQ435336-1|ABD92651.1| 135|Apis mellifera OBP19 protein. Length = 135 Score = 21.8 bits (44), Expect = 4.9 Identities = 10/29 (34%), Positives = 19/29 (65%), Gaps = 2/29 (6%) Frame = +2 Query: 254 EKTIEEI--LAADQEDESLRKYKEALLGQ 334 ++T+++I + D EDE ++Y E +L Q Sbjct: 41 QQTVDDINEVNFDVEDEKPQRYNECILKQ 69 >DQ015969-1|AAY81926.1| 397|Apis mellifera stargazin related protein STG-1 protein. Length = 397 Score = 21.8 bits (44), Expect = 4.9 Identities = 9/19 (47%), Positives = 10/19 (52%) Frame = -1 Query: 422 HRAQPHTMLASSLSLCEDH 366 H A H +L S LCE H Sbjct: 282 HHANHHAILGHSGFLCERH 300 >EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage protein protein. Length = 1010 Score = 21.0 bits (42), Expect = 8.5 Identities = 9/37 (24%), Positives = 20/37 (54%) Frame = +2 Query: 242 KPPPEKTIEEILAADQEDESLRKYKEALLGQAQAGAV 352 +P P + ++ + A+ + + +YK ++ AGAV Sbjct: 45 QPIPNQELQNLGASYDIESNSHQYKNPIIVMYYAGAV 81 Database: bee Posted date: Oct 23, 2007 1:17 PM Number of letters in database: 146,343 Number of sequences in database: 438 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 145,829 Number of Sequences: 438 Number of extensions: 2628 Number of successful extensions: 9 Number of sequences better than 10.0: 7 Number of HSP's better than 10.0 without gapping: 9 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 9 length of database: 146,343 effective HSP length: 54 effective length of database: 122,691 effective search space used: 16195212 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
- SilkBase 1999-2023 -