Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmov10h18
         (469 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439060-12|CAD27763.1|  450|Anopheles gambiae putative tachykin...    25   1.00 
AY705402-1|AAU12511.1|  509|Anopheles gambiae nicotinic acetylch...    24   2.3  
AY705399-1|AAU12508.1|  533|Anopheles gambiae nicotinic acetylch...    24   2.3  
AB090815-2|BAC57906.1|  973|Anopheles gambiae reverse transcript...    23   7.0  
AF532982-1|AAQ10289.1|  459|Anopheles gambiae putative RNA methy...    22   9.3  

>AJ439060-12|CAD27763.1|  450|Anopheles gambiae putative tachykinin
           receptor protein.
          Length = 450

 Score = 25.4 bits (53), Expect = 1.00
 Identities = 9/28 (32%), Positives = 16/28 (57%)
 Frame = +2

Query: 302 FTGEISPAMIKDVGVNWVILGHSERRTI 385
           F G +  A + ++ V W++L H   RT+
Sbjct: 96  FAGIVITATVGNLIVVWIVLSHKRMRTV 123


>AY705402-1|AAU12511.1|  509|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 7 protein.
          Length = 509

 Score = 24.2 bits (50), Expect = 2.3
 Identities = 13/52 (25%), Positives = 24/52 (46%), Gaps = 1/52 (1%)
 Frame = +2

Query: 98  FVVGGNWKMNGDKNQINEIVNNLKKGP-LDPNVEVIVGVPAIYLSYVKTIIP 250
           F+  G W++ G   + NEI  N    P +D    +++    +Y  +   I+P
Sbjct: 174 FITNGEWELLGVPGKRNEIYYNCCPEPYIDITFAILIRRKTLYY-FFNLIVP 224


>AY705399-1|AAU12508.1|  533|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 5 protein.
          Length = 533

 Score = 24.2 bits (50), Expect = 2.3
 Identities = 15/52 (28%), Positives = 23/52 (44%), Gaps = 1/52 (1%)
 Frame = +2

Query: 98  FVVGGNWKMNGDKNQINEIVNNLKKGP-LDPNVEVIVGVPAIYLSYVKTIIP 250
           FV  G W + G   + NEI  N    P +D    +I+    +Y  +   I+P
Sbjct: 206 FVTNGEWDLLGVPGKRNEIYYNCCPEPYIDITFAIIIRRRTLYY-FFNLIVP 256


>AB090815-2|BAC57906.1|  973|Anopheles gambiae reverse transcriptase
           protein.
          Length = 973

 Score = 22.6 bits (46), Expect = 7.0
 Identities = 9/31 (29%), Positives = 18/31 (58%)
 Frame = -3

Query: 128 HSSSSYLQQQICDPFLLSYLSFQLFNKYRVS 36
           +S +S +    C P L S +++++ N Y +S
Sbjct: 163 NSRTSIIDLTFCSPALASSMNWRVSNAYTLS 193


>AF532982-1|AAQ10289.1|  459|Anopheles gambiae putative RNA
           methylase protein.
          Length = 459

 Score = 22.2 bits (45), Expect = 9.3
 Identities = 9/24 (37%), Positives = 14/24 (58%)
 Frame = +2

Query: 101 VVGGNWKMNGDKNQINEIVNNLKK 172
           V+ G W  +G ++ INEI    +K
Sbjct: 171 VLFGRWVADGKRDMINEISLKTRK 194


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 456,448
Number of Sequences: 2352
Number of extensions: 8588
Number of successful extensions: 18
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 563,979
effective HSP length: 59
effective length of database: 425,211
effective search space used: 40820256
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)