Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmov10h17
         (601 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY070607-1|AAL48078.1|  341|Drosophila melanogaster RE71054p pro...   124   7e-29
AE014297-3186|AAF56022.1|  341|Drosophila melanogaster CG6932-PA...   124   7e-29
AE014297-1933|AAF55130.1|  537|Drosophila melanogaster CG3984-PA...    31   1.6  

>AY070607-1|AAL48078.1|  341|Drosophila melanogaster RE71054p
           protein.
          Length = 341

 Score =  124 bits (300), Expect = 7e-29
 Identities = 55/84 (65%), Positives = 64/84 (76%)
 Frame = +1

Query: 349 LHPLVIMNVSEHWTRLKAQEGFPQTVVGALIGKQKGRNIEVMNSFELVFSMXXXXXXXXX 528
           LHPLVIMN+SEHWTR +AQ G P+ V GALIGKQKGRNIE+MNSFEL   +         
Sbjct: 56  LHPLVIMNISEHWTRFRAQHGEPRQVYGALIGKQKGRNIEIMNSFELKTDVIGDETVINK 115

Query: 529 XYYNMKEEQFXQVFSDMDFLGWYT 600
            YYN KE+Q+ QVFSD+DF+GWYT
Sbjct: 116 DYYNKKEQQYKQVFSDLDFIGWYT 139


>AE014297-3186|AAF56022.1|  341|Drosophila melanogaster CG6932-PA
           protein.
          Length = 341

 Score =  124 bits (300), Expect = 7e-29
 Identities = 55/84 (65%), Positives = 64/84 (76%)
 Frame = +1

Query: 349 LHPLVIMNVSEHWTRLKAQEGFPQTVVGALIGKQKGRNIEVMNSFELVFSMXXXXXXXXX 528
           LHPLVIMN+SEHWTR +AQ G P+ V GALIGKQKGRNIE+MNSFEL   +         
Sbjct: 56  LHPLVIMNISEHWTRFRAQHGEPRQVYGALIGKQKGRNIEIMNSFELKTDVIGDETVINK 115

Query: 529 XYYNMKEEQFXQVFSDMDFLGWYT 600
            YYN KE+Q+ QVFSD+DF+GWYT
Sbjct: 116 DYYNKKEQQYKQVFSDLDFIGWYT 139


>AE014297-1933|AAF55130.1|  537|Drosophila melanogaster CG3984-PA
           protein.
          Length = 537

 Score = 30.7 bits (66), Expect = 1.6
 Identities = 12/21 (57%), Positives = 15/21 (71%)
 Frame = +1

Query: 235 SSGPPIEVPNPTSPAPTTPGS 297
           ++GP I  P+PTSP  TTP S
Sbjct: 238 TNGPSINAPSPTSPPTTTPPS 258


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,138,496
Number of Sequences: 53049
Number of extensions: 432127
Number of successful extensions: 1520
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1382
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1511
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2441585082
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)