Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmov10h15
         (615 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292343-1|CAL23155.2|  301|Tribolium castaneum gustatory recept...    24   1.2  
Z69735-1|CAA93623.1|  162|Tribolium castaneum initiation factor ...    23   2.7  
U14732-1|AAC46491.1|  322|Tribolium castaneum fushi-tarazu protein.    22   4.7  
AY043292-2|AAK96032.1|  290|Tribolium castaneum homeodomain tran...    22   4.7  
AF321227-1|AAK16421.1|  290|Tribolium castaneum Ftz protein.           22   4.7  
AJ876407-1|CAI45288.1|  590|Tribolium castaneum phosphatase prot...    21   8.2  

>AM292343-1|CAL23155.2|  301|Tribolium castaneum gustatory receptor
           candidate 22 protein.
          Length = 301

 Score = 23.8 bits (49), Expect = 1.2
 Identities = 15/59 (25%), Positives = 29/59 (49%), Gaps = 2/59 (3%)
 Frame = +1

Query: 85  VFLLIQNQIKLIHN-IEHVSVSKLFFEDFFQL*STIVFTLQAIT-FYTSEAAVCPCNNW 255
           +FLLIQ + ++I+N I    V+    +  F L   +V  ++ I   +  +  +C   N+
Sbjct: 108 IFLLIQTRFEMINNIITRGDVTSTTIKKLFNLHKILVKVVREINGIFAFQVLMCTSMNF 166


>Z69735-1|CAA93623.1|  162|Tribolium castaneum initiation factor
           5-like protein protein.
          Length = 162

 Score = 22.6 bits (46), Expect = 2.7
 Identities = 8/24 (33%), Positives = 13/24 (54%)
 Frame = +2

Query: 314 EKFKTKMNDFVSDSKNMIFTEDLK 385
           E  + +M D    +KNM   +DL+
Sbjct: 127 EAVRARMQDLTEGAKNMTINDDLE 150


>U14732-1|AAC46491.1|  322|Tribolium castaneum fushi-tarazu protein.
          Length = 322

 Score = 21.8 bits (44), Expect = 4.7
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = -3

Query: 265 PIYSNCCRGIQQPHL 221
           PIY +C   I QP+L
Sbjct: 53  PIYESCRFSINQPYL 67


>AY043292-2|AAK96032.1|  290|Tribolium castaneum homeodomain
           transcription factor Fushitarazu protein.
          Length = 290

 Score = 21.8 bits (44), Expect = 4.7
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = -3

Query: 265 PIYSNCCRGIQQPHL 221
           PIY +C   I QP+L
Sbjct: 53  PIYESCRFSINQPYL 67


>AF321227-1|AAK16421.1|  290|Tribolium castaneum Ftz protein.
          Length = 290

 Score = 21.8 bits (44), Expect = 4.7
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = -3

Query: 265 PIYSNCCRGIQQPHL 221
           PIY +C   I QP+L
Sbjct: 53  PIYESCRFSINQPYL 67


>AJ876407-1|CAI45288.1|  590|Tribolium castaneum phosphatase
           protein.
          Length = 590

 Score = 21.0 bits (42), Expect = 8.2
 Identities = 9/14 (64%), Positives = 11/14 (78%)
 Frame = +2

Query: 413 DLQLVLNMIKKFNT 454
           D+QL LN IKK +T
Sbjct: 26  DVQLRLNSIKKLST 39


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 155,102
Number of Sequences: 336
Number of extensions: 3542
Number of successful extensions: 9
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15666150
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)