Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmov10h14
         (336 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q7X3M0 Cluster: ParA; n=6; root|Rep: ParA - Pseudomonas...    33   0.95 
UniRef50_UPI0000E46CF0 Cluster: PREDICTED: hypothetical protein;...    33   1.3  
UniRef50_Q72A23 Cluster: Putative uncharacterized protein; n=1; ...    32   2.9  
UniRef50_UPI00005869FB Cluster: PREDICTED: hypothetical protein,...    31   3.8  
UniRef50_Q8IHP9 Cluster: Putative uncharacterized protein; n=3; ...    31   3.8  
UniRef50_Q5K9K6 Cluster: Serine/threonine-protein kinase, putati...    31   3.8  
UniRef50_Q0W909 Cluster: Predicted metallo-beta-lactamase; n=1; ...    31   6.7  
UniRef50_A6DSG3 Cluster: Putative uncharacterized protein; n=1; ...    30   8.9  
UniRef50_A3B5Q8 Cluster: Putative uncharacterized protein; n=2; ...    30   8.9  
UniRef50_Q89AB3 Cluster: Exodeoxyribonuclease V beta chain; n=1;...    30   8.9  

>UniRef50_Q7X3M0 Cluster: ParA; n=6; root|Rep: ParA - Pseudomonas
           putida
          Length = 373

 Score = 33.5 bits (73), Expect = 0.95
 Identities = 11/33 (33%), Positives = 23/33 (69%)
 Frame = +2

Query: 119 PRSIVHSTGLDEFDSPIFEVDEIPIEILRNIKP 217
           PR +  +T L E D P+ +VD++P++++  ++P
Sbjct: 192 PRQVGPNTWLIEADVPLLDVDDMPLDVIHQLRP 224


>UniRef50_UPI0000E46CF0 Cluster: PREDICTED: hypothetical protein;
           n=1; Strongylocentrotus purpuratus|Rep: PREDICTED:
           hypothetical protein - Strongylocentrotus purpuratus
          Length = 545

 Score = 33.1 bits (72), Expect = 1.3
 Identities = 18/51 (35%), Positives = 32/51 (62%), Gaps = 1/51 (1%)
 Frame = +2

Query: 50  IMKLLIIFTIVLTCIVVSGKHIHPRSIVHSTGLDEFDS-PIFEVDEIPIEI 199
           I+ L++  TI + CI +SGKHI     +++ G D+F S P+  +D + ++I
Sbjct: 349 IITLILKITIFIFCIGISGKHI---KFIYNQGPDKFCSYPLSILDSLMVKI 396


>UniRef50_Q72A23 Cluster: Putative uncharacterized protein; n=1;
           Desulfovibrio vulgaris subsp. vulgaris str.
           Hildenborough|Rep: Putative uncharacterized protein -
           Desulfovibrio vulgaris (strain Hildenborough / ATCC
           29579 / NCIMB8303)
          Length = 225

 Score = 31.9 bits (69), Expect = 2.9
 Identities = 17/53 (32%), Positives = 26/53 (49%)
 Frame = -3

Query: 328 LDCLNFKCSVPHFPACSGHVSFKALFAWWKVNRNESCWLDVSQDFNRYLVYFE 170
           ++C N KC++P+F   SGHV  K  F    + +      + S D+ R  V  E
Sbjct: 95  MNCKNDKCNLPNFSFSSGHVCEKIHFYRNYLKKKTIIRYEYSDDYTRREVLHE 147


>UniRef50_UPI00005869FB Cluster: PREDICTED: hypothetical protein,
            partial; n=2; Strongylocentrotus purpuratus|Rep:
            PREDICTED: hypothetical protein, partial -
            Strongylocentrotus purpuratus
          Length = 2549

 Score = 31.5 bits (68), Expect = 3.8
 Identities = 12/23 (52%), Positives = 14/23 (60%)
 Frame = +2

Query: 248  CEEGLERDVTGTCREVWY*TFKI 316
            C  G +RD +GTC  VW   FKI
Sbjct: 2416 CRPGTQRDYSGTCTRVWTFRFKI 2438


>UniRef50_Q8IHP9 Cluster: Putative uncharacterized protein; n=3;
            Plasmodium|Rep: Putative uncharacterized protein -
            Plasmodium falciparum (isolate 3D7)
          Length = 2940

 Score = 31.5 bits (68), Expect = 3.8
 Identities = 18/45 (40%), Positives = 23/45 (51%), Gaps = 1/45 (2%)
 Frame = +1

Query: 1    DQMIRRVYTRRI*SEYN-NETINNIHDSIDMYRCKRETYSSEKHR 132
            D+  ++     I S YN N+ INN HD ID    K   Y  EKH+
Sbjct: 1338 DKNYKKNLNLNISSSYNTNDHINNYHDDIDKTN-KDNKYEEEKHK 1381


>UniRef50_Q5K9K6 Cluster: Serine/threonine-protein kinase, putative;
           n=1; Filobasidiella neoformans|Rep:
           Serine/threonine-protein kinase, putative - Cryptococcus
           neoformans (Filobasidiella neoformans)
          Length = 1022

 Score = 31.5 bits (68), Expect = 3.8
 Identities = 14/31 (45%), Positives = 20/31 (64%)
 Frame = +2

Query: 122 RSIVHSTGLDEFDSPIFEVDEIPIEILRNIK 214
           RS+V    LDE + P+  VDEI  +I+ N+K
Sbjct: 312 RSLVSPPSLDEVERPVNSVDEIDPDIMGNLK 342


>UniRef50_Q0W909 Cluster: Predicted metallo-beta-lactamase; n=1;
           uncultured methanogenic archaeon RC-I|Rep: Predicted
           metallo-beta-lactamase - Uncultured methanogenic
           archaeon RC-I
          Length = 516

 Score = 30.7 bits (66), Expect = 6.7
 Identities = 14/47 (29%), Positives = 24/47 (51%)
 Frame = -3

Query: 235 NRNESCWLDVSQDFNRYLVYFEDRRIKLIKSRGMHDASRMNMFPAYN 95
           N     +LD   +++RY  YF +       +RG+HD  ++N+ P  N
Sbjct: 22  NGGSGVFLDFGMNYSRYNEYFNEYLCDR-DTRGIHDLLQLNLIPKLN 67


>UniRef50_A6DSG3 Cluster: Putative uncharacterized protein; n=1;
           Lentisphaera araneosa HTCC2155|Rep: Putative
           uncharacterized protein - Lentisphaera araneosa HTCC2155
          Length = 256

 Score = 30.3 bits (65), Expect = 8.9
 Identities = 19/66 (28%), Positives = 31/66 (46%)
 Frame = +2

Query: 44  NTIMKLLIIFTIVLTCIVVSGKHIHPRSIVHSTGLDEFDSPIFEVDEIPIEILRNIKPTR 223
           NT+  L+ I  I+L   +++G    PR+   +   D FD     V   PI    NIK T+
Sbjct: 2   NTVHNLIRISIIILAMTILTGCATSPRTHFTNLQNDFFDISRVNVAGGPIGFGANIKATK 61

Query: 224 FVPINF 241
            + + +
Sbjct: 62  LLELQY 67


>UniRef50_A3B5Q8 Cluster: Putative uncharacterized protein; n=2;
           Oryza sativa|Rep: Putative uncharacterized protein -
           Oryza sativa subsp. japonica (Rice)
          Length = 381

 Score = 30.3 bits (65), Expect = 8.9
 Identities = 14/34 (41%), Positives = 21/34 (61%), Gaps = 1/34 (2%)
 Frame = +2

Query: 59  LLIIFTIVLTCIVVSGKH-IHPRSIVHSTGLDEF 157
           L+++FT+VLTC  +S +H + P   VH    D F
Sbjct: 98  LILLFTLVLTCSGLSNQHTMTPEIAVHGFPADNF 131


>UniRef50_Q89AB3 Cluster: Exodeoxyribonuclease V beta chain; n=1;
           Buchnera aphidicola (Baizongia pistaciae)|Rep:
           Exodeoxyribonuclease V beta chain - Buchnera aphidicola
           subsp. Baizongia pistaciae
          Length = 1180

 Score = 30.3 bits (65), Expect = 8.9
 Identities = 9/24 (37%), Positives = 18/24 (75%)
 Frame = -3

Query: 238 VNRNESCWLDVSQDFNRYLVYFED 167
           +  N S W+ +SQ+FN+YL+++ +
Sbjct: 629 IPNNHSYWIKLSQEFNQYLIFWNN 652


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 288,230,365
Number of Sequences: 1657284
Number of extensions: 5095370
Number of successful extensions: 14856
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 14602
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14856
length of database: 575,637,011
effective HSP length: 87
effective length of database: 431,453,303
effective search space used: 10354879272
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)